View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6871A_low_221 (Length: 218)

Name: NF6871A_low_221
Description: NF6871A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6871A_low_221
NF6871A_low_221
[»] chr2 (23 HSPs)
chr2 (33-177)||(11175906-11176050)
chr2 (29-178)||(9051184-9051333)
chr2 (33-178)||(30714435-30714580)
chr2 (33-179)||(18537989-18538135)
chr2 (33-173)||(2986689-2986829)
chr2 (33-177)||(6763878-6764022)
chr2 (33-178)||(15735062-15735207)
chr2 (33-182)||(38716188-38716336)
chr2 (37-182)||(4587854-4588000)
chr2 (35-178)||(25298964-25299106)
chr2 (33-180)||(22191042-22191189)
chr2 (33-183)||(15700740-15700890)
chr2 (33-107)||(9787628-9787702)
chr2 (37-107)||(331781-331851)
chr2 (118-180)||(25884174-25884236)
chr2 (33-78)||(17368314-17368359)
chr2 (118-181)||(30714270-30714333)
chr2 (118-178)||(2986932-2986992)
chr2 (44-107)||(36464343-36464404)
chr2 (41-106)||(2190605-2190667)
chr2 (118-176)||(9787803-9787861)
chr2 (66-107)||(15147814-15147854)
chr2 (41-81)||(33199547-33199587)
[»] chr3 (51 HSPs)
chr3 (33-179)||(26628186-26628332)
chr3 (33-178)||(27852912-27853057)
chr3 (33-177)||(48907453-48907596)
chr3 (33-178)||(25179576-25179721)
chr3 (33-181)||(3328974-3329122)
chr3 (33-177)||(8542609-8542753)
chr3 (33-180)||(4521950-4522097)
chr3 (33-176)||(13080894-13081037)
chr3 (33-180)||(22447905-22448052)
chr3 (35-176)||(22500758-22500898)
chr3 (33-176)||(8339101-8339244)
chr3 (33-173)||(23428780-23428920)
chr3 (33-179)||(30155306-30155450)
chr3 (33-177)||(10743408-10743550)
chr3 (33-148)||(28173890-28174005)
chr3 (29-97)||(28155039-28155107)
chr3 (41-164)||(33279754-33279876)
chr3 (43-107)||(20001778-20001842)
chr3 (35-164)||(25022826-25022952)
chr3 (33-105)||(48860773-48860845)
chr3 (33-182)||(40836340-40836488)
chr3 (73-180)||(32960811-32960914)
chr3 (33-107)||(3780950-3781021)
chr3 (33-107)||(46673209-46673282)
chr3 (36-107)||(9496381-9496450)
chr3 (33-107)||(22416401-22416477)
chr3 (118-181)||(34878524-34878587)
chr3 (35-97)||(34878692-34878754)
chr3 (118-183)||(26628018-26628083)
chr3 (43-174)||(4775852-4775983)
chr3 (118-178)||(22447738-22447798)
chr3 (36-107)||(26127070-26127139)
chr3 (36-107)||(26177120-26177189)
chr3 (118-177)||(20001954-20002012)
chr3 (33-180)||(26633520-26633663)
chr3 (118-185)||(28173720-28173787)
chr3 (43-180)||(36311148-36311283)
chr3 (118-176)||(28154882-28154940)
chr3 (118-179)||(1743495-1743556)
chr3 (118-179)||(13081140-13081201)
chr3 (43-104)||(33105013-33105073)
chr3 (43-107)||(46387745-46387808)
chr3 (118-177)||(1743254-1743313)
chr3 (118-177)||(3328812-3328871)
chr3 (125-176)||(25336358-25336409)
chr3 (118-177)||(26633360-26633418)
chr3 (118-164)||(8338952-8338998)
chr3 (123-181)||(32960640-32960698)
chr3 (118-163)||(4776064-4776109)
chr3 (118-178)||(22500594-22500654)
chr3 (118-178)||(25179821-25179881)
[»] chr1 (40 HSPs)
chr1 (33-178)||(24961951-24962096)
chr1 (33-179)||(4059683-4059829)
chr1 (33-177)||(3616798-3616942)
chr1 (33-185)||(29676070-29676222)
chr1 (33-178)||(24196259-24196404)
chr1 (53-179)||(28920832-28920958)
chr1 (33-164)||(46432377-46432508)
chr1 (33-164)||(24749809-24749941)
chr1 (33-176)||(43706815-43706957)
chr1 (33-176)||(48472024-48472165)
chr1 (33-177)||(19078086-19078228)
chr1 (33-177)||(19125976-19126118)
chr1 (37-176)||(2425225-2425362)
chr1 (37-179)||(51719286-51719427)
chr1 (33-179)||(2657673-2657818)
chr1 (43-106)||(21148048-21148111)
chr1 (37-106)||(4455208-4455277)
chr1 (29-107)||(28750346-28750425)
chr1 (118-164)||(16551656-16551702)
chr1 (118-180)||(51719119-51719181)
chr1 (118-179)||(16972096-16972157)
chr1 (118-182)||(2657507-2657571)
chr1 (118-182)||(3617044-3617108)
chr1 (43-107)||(22786099-22786162)
chr1 (118-181)||(2425469-2425532)
chr1 (118-177)||(4059521-4059580)
chr1 (118-173)||(21148193-21148248)
chr1 (43-106)||(29182172-29182234)
chr1 (118-164)||(28552317-28552363)
chr1 (119-181)||(51685809-51685871)
chr1 (66-107)||(16551838-16551879)
chr1 (45-179)||(18606857-18606990)
chr1 (123-188)||(27092841-27092906)
chr1 (118-175)||(43706655-43706712)
chr1 (118-175)||(50334719-50334776)
chr1 (118-178)||(46432214-46432274)
chr1 (118-177)||(24196507-24196566)
chr1 (118-148)||(48471891-48471921)
chr1 (118-174)||(16878931-16878987)
chr1 (118-182)||(24962199-24962263)
[»] chr7 (51 HSPs)
chr7 (33-181)||(20636614-20636762)
chr7 (33-181)||(20638486-20638634)
chr7 (33-178)||(21224513-21224658)
chr7 (33-178)||(27869356-27869501)
chr7 (33-191)||(42271318-42271475)
chr7 (33-185)||(3562594-3562745)
chr7 (33-176)||(17305764-17305907)
chr7 (33-176)||(24597676-24597819)
chr7 (33-181)||(8526791-8526939)
chr7 (33-182)||(19919764-19919911)
chr7 (34-175)||(2331015-2331155)
chr7 (33-176)||(19195374-19195517)
chr7 (33-177)||(31493910-31494053)
chr7 (33-178)||(18754427-18754572)
chr7 (33-178)||(48176124-48176268)
chr7 (33-107)||(35337683-35337757)
chr7 (33-163)||(41452410-41452540)
chr7 (33-179)||(11843339-11843484)
chr7 (33-178)||(13577947-13578090)
chr7 (37-182)||(36746668-36746812)
chr7 (33-91)||(6798075-6798133)
chr7 (33-107)||(21225709-21225782)
chr7 (33-178)||(44078032-44078176)
chr7 (43-106)||(3403223-3403286)
chr7 (118-177)||(8527040-8527099)
chr7 (29-179)||(26385260-26385408)
chr7 (43-174)||(39181939-39182066)
chr7 (33-177)||(14624607-14624745)
chr7 (118-185)||(31494156-31494223)
chr7 (118-180)||(26385507-26385569)
chr7 (127-181)||(33237411-33237465)
chr7 (33-98)||(10023945-10024010)
chr7 (118-174)||(13577789-13577845)
chr7 (43-91)||(43251349-43251397)
chr7 (118-181)||(48175957-48176021)
chr7 (43-105)||(5111512-5111571)
chr7 (118-177)||(11843177-11843236)
chr7 (118-177)||(20636864-20636923)
chr7 (118-181)||(24597512-24597575)
chr7 (118-177)||(27869195-27869254)
chr7 (118-148)||(3562461-3562491)
chr7 (118-164)||(19919616-19919662)
chr7 (66-95)||(5348139-5348168)
chr7 (118-163)||(19493562-19493607)
chr7 (118-183)||(24448038-24448103)
chr7 (43-107)||(24464646-24464708)
chr7 (43-91)||(9157222-9157269)
chr7 (118-178)||(10023784-10023844)
chr7 (43-91)||(15681682-15681730)
chr7 (120-176)||(15681878-15681934)
chr7 (120-164)||(42438034-42438078)
[»] chr4 (47 HSPs)
chr4 (33-181)||(41877187-41877333)
chr4 (33-177)||(13397836-13397980)
chr4 (33-176)||(4357252-4357395)
chr4 (33-179)||(5304508-5304652)
chr4 (33-181)||(35475286-35475432)
chr4 (33-178)||(43793792-43793936)
chr4 (33-176)||(25011735-25011878)
chr4 (33-182)||(41034629-41034779)
chr4 (33-177)||(6789119-6789263)
chr4 (33-185)||(9195825-9195975)
chr4 (33-176)||(2931321-2931464)
chr4 (33-107)||(15058979-15059053)
chr4 (33-182)||(55780381-55780529)
chr4 (33-182)||(55844561-55844709)
chr4 (33-176)||(4433344-4433485)
chr4 (33-176)||(52838231-52838371)
chr4 (118-178)||(18259357-18259417)
chr4 (66-177)||(25618790-25618901)
chr4 (33-107)||(13826580-13826653)
chr4 (33-179)||(45633435-45633580)
chr4 (37-183)||(19232509-19232655)
chr4 (33-178)||(1588574-1588718)
chr4 (43-106)||(4098726-4098789)
chr4 (33-164)||(27018229-27018357)
chr4 (33-182)||(15734394-15734541)
chr4 (32-82)||(15795411-15795461)
chr4 (118-178)||(43793629-43793689)
chr4 (118-182)||(45633682-45633746)
chr4 (37-148)||(9397219-9397330)
chr4 (118-164)||(4357497-4357543)
chr4 (123-177)||(24626221-24626275)
chr4 (41-91)||(48158681-48158731)
chr4 (118-182)||(4098902-4098966)
chr4 (118-178)||(4433181-4433241)
chr4 (122-177)||(3927665-3927720)
chr4 (127-182)||(4099044-4099099)
chr4 (127-178)||(20919333-20919384)
chr4 (118-177)||(25011980-25012039)
chr4 (118-164)||(2715731-2715777)
chr4 (119-177)||(3928902-3928960)
chr4 (118-176)||(9397435-9397493)
chr4 (37-109)||(23362500-23362570)
chr4 (118-163)||(47869899-47869944)
chr4 (118-178)||(13826418-13826478)
chr4 (129-181)||(17138540-17138592)
chr4 (120-184)||(25685867-25685931)
chr4 (43-91)||(51291341-51291389)
[»] scaffold0025 (2 HSPs)
scaffold0025 (33-177)||(61813-61957)
scaffold0025 (33-182)||(19279-19425)
[»] chr8 (37 HSPs)
chr8 (33-177)||(17648242-17648386)
chr8 (33-177)||(4519028-4519172)
chr8 (33-176)||(30784425-30784568)
chr8 (33-181)||(12723422-12723570)
chr8 (33-177)||(44146971-44147114)
chr8 (33-176)||(8802561-8802703)
chr8 (36-178)||(21929967-21930107)
chr8 (33-178)||(38630053-38630198)
chr8 (29-173)||(5192428-5192572)
chr8 (33-181)||(19924260-19924408)
chr8 (33-179)||(4807761-4807908)
chr8 (29-178)||(22452330-22452479)
chr8 (37-176)||(33895375-33895513)
chr8 (33-107)||(19391548-19391622)
chr8 (33-148)||(21666435-21666549)
chr8 (33-183)||(18881664-18881812)
chr8 (118-179)||(19392812-19392873)
chr8 (29-182)||(3380193-3380345)
chr8 (33-107)||(32400483-32400557)
chr8 (118-177)||(5192271-5192330)
chr8 (118-164)||(15869349-15869395)
chr8 (118-183)||(33895619-33895684)
chr8 (118-188)||(4518857-4518927)
chr8 (118-187)||(44147216-44147285)
chr8 (118-178)||(4807598-4807658)
chr8 (43-106)||(3208050-3208112)
chr8 (43-107)||(1824676-1824737)
chr8 (43-107)||(1859121-1859182)
chr8 (118-179)||(18881501-18881562)
chr8 (122-179)||(32968453-32968510)
chr8 (118-179)||(38612216-38612277)
chr8 (118-179)||(38613417-38613478)
chr8 (122-187)||(38974784-38974849)
chr8 (122-187)||(39005882-39005947)
chr8 (128-180)||(2053145-2053197)
chr8 (118-178)||(19391386-19391445)
chr8 (118-182)||(30784259-30784323)
[»] chr6 (37 HSPs)
chr6 (33-177)||(31210793-31210937)
chr6 (33-178)||(4597566-4597711)
chr6 (33-179)||(24051006-24051151)
chr6 (33-177)||(32451725-32451869)
chr6 (33-176)||(26710468-26710611)
chr6 (33-179)||(18791355-18791500)
chr6 (33-176)||(24603361-24603504)
chr6 (43-176)||(18749299-18749432)
chr6 (33-181)||(34833920-34834068)
chr6 (33-179)||(22968315-22968460)
chr6 (33-179)||(23819933-23820078)
chr6 (33-176)||(25819685-25819827)
chr6 (35-162)||(15298500-15298626)
chr6 (33-179)||(14572339-14572483)
chr6 (33-180)||(8412754-8412901)
chr6 (29-107)||(3118748-3118826)
chr6 (33-97)||(35102652-35102716)
chr6 (33-177)||(32682439-32682581)
chr6 (33-176)||(22269410-22269549)
chr6 (43-175)||(4013838-4013968)
chr6 (33-106)||(19282372-19282445)
chr6 (122-177)||(35102713-35102768)
chr6 (41-107)||(4370967-4371032)
chr6 (119-183)||(6842327-6842391)
chr6 (43-163)||(2058993-2059111)
chr6 (37-107)||(12427300-12427370)
chr6 (118-163)||(15298730-15298775)
chr6 (118-182)||(23124932-23124996)
chr6 (118-178)||(35102489-35102549)
chr6 (43-106)||(16415502-16415564)
chr6 (118-164)||(4597417-4597463)
chr6 (118-163)||(12291430-12291475)
chr6 (66-107)||(20863891-20863932)
chr6 (120-180)||(8821869-8821929)
chr6 (118-178)||(18749095-18749155)
chr6 (33-81)||(18749257-18749305)
chr6 (43-106)||(26240025-26240089)
[»] scaffold0179 (2 HSPs)
scaffold0179 (33-177)||(5810-5954)
scaffold0179 (118-178)||(5648-5708)
[»] scaffold0419 (2 HSPs)
scaffold0419 (29-176)||(3117-3264)
scaffold0419 (118-164)||(2973-3019)
[»] scaffold0001 (1 HSPs)
scaffold0001 (29-180)||(142104-142254)
[»] chr5 (39 HSPs)
chr5 (33-176)||(18695004-18695146)
chr5 (33-177)||(26639198-26639342)
chr5 (33-181)||(245591-245737)
chr5 (35-182)||(23765553-23765699)
chr5 (35-182)||(23815401-23815547)
chr5 (33-178)||(36641141-36641286)
chr5 (38-177)||(8645796-8645935)
chr5 (33-178)||(25557036-25557180)
chr5 (33-178)||(38408627-38408771)
chr5 (33-182)||(40428800-40428947)
chr5 (33-148)||(16901158-16901271)
chr5 (33-107)||(19169412-19169486)
chr5 (33-109)||(10379349-10379424)
chr5 (34-178)||(10293249-10293391)
chr5 (34-164)||(16307638-16307769)
chr5 (33-107)||(31055475-31055549)
chr5 (33-177)||(17704748-17704887)
chr5 (66-177)||(31648055-31648165)
chr5 (33-174)||(7835722-7835852)
chr5 (47-173)||(37961424-37961549)
chr5 (43-105)||(38476641-38476703)
chr5 (118-183)||(20654040-20654105)
chr5 (43-106)||(2373215-2373277)
chr5 (37-106)||(41663689-41663756)
chr5 (118-179)||(31055312-31055373)
chr5 (118-178)||(18695248-18695308)
chr5 (125-181)||(31648237-31648293)
chr5 (33-107)||(7187260-7187332)
chr5 (118-177)||(16900996-16901055)
chr5 (123-178)||(23765418-23765473)
chr5 (123-178)||(23815266-23815321)
chr5 (118-161)||(24025036-24025079)
chr5 (33-182)||(35302074-35302223)
chr5 (118-180)||(2373391-2373453)
chr5 (43-105)||(34125130-34125192)
chr5 (118-164)||(40428651-40428697)
chr5 (43-106)||(23040120-23040182)
chr5 (118-182)||(31576487-31576551)
chr5 (118-182)||(38408873-38408937)
[»] scaffold0087 (1 HSPs)
scaffold0087 (33-177)||(25125-25269)
[»] scaffold0607 (2 HSPs)
scaffold0607 (33-178)||(2210-2353)
scaffold0607 (118-177)||(2047-2106)
[»] scaffold1202 (1 HSPs)
scaffold1202 (33-179)||(1935-2080)
[»] scaffold0062 (2 HSPs)
scaffold0062 (33-183)||(49652-49802)
scaffold0062 (33-183)||(62191-62341)
[»] scaffold0406 (1 HSPs)
scaffold0406 (33-176)||(1997-2134)
[»] scaffold0060 (1 HSPs)
scaffold0060 (33-185)||(66174-66317)
[»] scaffold0267 (1 HSPs)
scaffold0267 (33-107)||(3729-3801)
[»] scaffold0683 (1 HSPs)
scaffold0683 (52-178)||(5288-5413)
[»] scaffold0150 (1 HSPs)
scaffold0150 (33-96)||(5911-5975)
[»] scaffold1875 (2 HSPs)
scaffold1875 (33-107)||(917-991)
scaffold1875 (118-178)||(754-814)
[»] scaffold0002 (4 HSPs)
scaffold0002 (45-106)||(455000-455061)
scaffold0002 (43-100)||(455102-455159)
scaffold0002 (118-175)||(455274-455331)
scaffold0002 (118-182)||(436354-436418)


Alignment Details
Target: chr2 (Bit Score: 97; Significance: 8e-48; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 11176050 - 11175906
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  11176050 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 11175951  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||    
T  11175950 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcct 11175906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 9051184 - 9051333
Alignment:
Q  29 aagaggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggcc 128  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||||||| |        ||||||||| |    
T  9051184 aagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggagtcacttttgccattttttttaatagggggtc 9051283  T
Q  129 aaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  9051284 aaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagccta 9051333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 30714435 - 30714580
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||||||||||| |        |||||||||||||||    
T  30714435 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttcccgaaacatagggggtcacttttgccattttttttaatagggggccaaaa 30714534  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    | |||||||||| ||||||||||||||||||| |||||||||||||    
T  30714535 ttgcaacattttaaaatttagagggcgaaaagtgaagtttagccta 30714580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 18537989 - 18538135
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||| ||||||  || |||||| ||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  18537989 ggtcaaaaagcatatttccctaatgttatgaggtcaaaaaagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 18538088  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18538089 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctaa 18538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 2986829 - 2986689
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||  |        |||||||||||||||    
T  2986829 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgtcattttttttaatagggggccaaaa 2986730  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagttta 173  Q
    |||||||||||||||| ||| ||||||||||| ||||||||    
T  2986729 tcgcaacattttgaaacttaaagggcgaaaagtgaagttta 2986689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 6763878 - 6764022
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||| ||||||    
T  6763878 ggtcaaaaagcatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggaccaaaa 6763977  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||    
T  6763978 tcgcaacattttgaaacttagagggcgaaaaatgaagtttagcct 6764022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 15735207 - 15735062
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||  ||||||||||||||||||  || |||||||||||||||| || |||||||||||||||||||||| |        |||||||| ||||||    
T  15735207 ggtcaaaatacatatttcccttatgttacgaggtcaaaagagcatatttcccaaaacatagggggtcacttttgccatttcttttaataggggaccaaaa 15735108  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||    
T  15735107 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 15735062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 38716336 - 38716188
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        ||||||||| |||||    
T  38716336 ggtcaaaaagcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgcca-tttttttaatagggggtcaaaa 38716238  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||||| ||| |||||||| |||||| |||||||||||||||||    
T  38716237 tcgcaacattttaaaacttagagggtgaaaagtgaagtttagcctaaaaa 38716188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 4588000 - 4587854
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgcta-nnnnnnnnaatagggggccaaaatcg 135  Q
    ||||| |||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |         ||||||||||||||||||    
T  4588000 aaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttttaatagggggccaaaatcg 4587901  T
Q  136 caacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    ||||||||||||| |||| |||||||||| |  ||||||||||||||    
T  4587900 caacattttgaaacttagggggcgaaaagtggtgtttagcctaaaaa 4587854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 178
Target Start/End: Original strand, 25298964 - 25299106
Alignment:
Q  35 tcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatc 134  Q
    ||||||| ||||||||| ||||||||  || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||| ||||||    
T  25298964 tcaaaaaacatatttcctttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaatagggggctaaaatc 25299062  T
Q  135 gcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||| ||||||||||||||  |||||||||||||    
T  25299063 gcaacattttgaaacttagagggcgaaaattgaagtttagccta 25299106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 22191189 - 22191042
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||| |||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||||| |         ||||||||||||||    
T  22191189 ggtcaaaaggcatatttcccttatgttaggaagtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttgatagggggccaaaa 22191090  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    | |||||||||| |||  ||| || ||||||| | |||||||||||||    
T  22191089 ttgcaacattttaaaacataggggacgaaaagtgtagtttagcctaaa 22191042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 15700890 - 15700740
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| || |||||||||||||||||| ||| |        |||||||| ||||||    
T  15700890 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgccattttttttaataggggtccaaaa 15700791  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaat 183  Q
    |||||||||||| ||| |||  |||||||||| | | ||||||||||||||    
T  15700790 tcgcaacattttaaaacttaaggggcgaaaagtggactttagcctaaaaat 15700740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 9787702 - 9787628
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||||    
T  9787702 ggtcaaaaagcatatttcccttatgttagcaggtcaaaagagcatatttccctaaacatagtgggtcacttttgc 9787628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 331851 - 331781
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||||||||| |||||| | |||||||||||||||| ||||||||| |  ||||||||||||    
T  331851 aaaaagcatatttcccttaagttagagggtcaaaagagcatatttccctaaacatggaaggtcacttttgc 331781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 25884236 - 25884174
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||| | | |||||||||||||    
T  25884236 aatagggggccaaaatcgcaacattttaaaacttagggggcgaaatgtgcagtttagcctaaa 25884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 17368359 - 17368314
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcata 78  Q
    ||||||||||||||||||||||||||||| || |||||||||||||    
T  17368359 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcata 17368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 30714333 - 30714270
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    ||||||||||||||||||||||||||| |||  ||| |||||||||| | | ||||||||||||    
T  30714333 aatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcctaaaa 30714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 2986932 - 2986992
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||||||||||||||||||  ||||| | |||||| | | |||||||||    
T  2986932 aatagggggccaaaatcgcaacattttgaaacatagagagtgaaaagtgcactttagccta 2986992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 36464404 - 36464343
Alignment:
Q  44 atatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||||||||  | |||||||| ||||||| |||||||||  ||||||||||||||    
T  36464404 atatttcccttatgttagggggtcaaaagatcatatttccctaaacat--ggggtcacttttgc 36464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 2190667 - 2190605
Alignment:
Q  41 agcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    ||||||||| ||||| |||||| | |||||||||||||||| |||||||||   ||||||||||||    
T  2190667 agcatattttccttaagttagagggtcaaaagagcatatttccctaaacat---gggtcacttttg 2190605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 9787803 - 9787861
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||||||| |||| |||||||||  ||| |||||||||| | |||||||||    
T  9787803 aatagggggccaaaattgcaatattttgaaacatagggggcgaaaagtgtagtttagcc 9787861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 15147854 - 15147814
Alignment:
Q  66 tcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  15147854 tcaaaagagcatatttccctaaacat-gggggtcacttttgc 15147814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 33199587 - 33199547
Alignment:
Q  41 agcatatttcccttatgttagaagctcaaaagagcatattt 81  Q
    ||||||||||||| | |||||||| ||||||||||||||||    
T  33199587 agcatatttccctaaagttagaaggtcaaaagagcatattt 33199547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 26628186 - 26628332
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  26628186 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 26628285  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||    
T  26628286 tcgcaacattttgaaacttagagggcgaaaaatgaagtttagcctaa 26628332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 27852912 - 27853057
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  27852912 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 27853011  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    | |||||||||||||| ||||||||||||||| |||||||||||||    
T  27853012 ttgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 27853057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 48907453 - 48907596
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  48907453 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaatagggggccaaaa 48907551  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||    
T  48907552 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcct 48907596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 25179721 - 25179576
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||| |||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||    
T  25179721 ggtcaaaaaacatatttctcttacgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgctattttttttaatagggggccaaaa 25179622  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||    
T  25179621 tcgcaacattttaaaacttagagggcgaaaagtgaagtttagccta 25179576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 181
Target Start/End: Original strand, 3328974 - 3329122
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||| |||||||||||||||||||| || |||||||||||||||| ||||||| ||||||||||||||| | |        |||||||||||||||    
T  3328974 ggtcaaaaggcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacttagggggtcactttttccattttttttaatagggggccaaaa 3329073  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  3329074 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagccaaaaa 3329122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 8542753 - 8542609
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        ||||||||| |||||    
T  8542753 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaa 8542654  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    | |||||||||||||| ||||||| ||||||| ||||||||||||    
T  8542653 ttgcaacattttgaaacttagaggacgaaaagtgaagtttagcct 8542609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 4522097 - 4521950
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||| |||||||||| ||||||||||||||||        |||||||||||||||    
T  4522097 ggtcaaaaagcatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatatggggtcacttttgctactttttttaatagggggccaaaa 4521998  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    |||||||||||| ||| ||| ||||||||||| |||||||| ||||||    
T  4521997 tcgcaacattttaaaacttatagggcgaaaagtgaagtttaacctaaa 4521950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 13081037 - 13080894
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||| |||||| |||||||||||||||||| |        ||||||| |||||||    
T  13081037 ggtcaaaaagcatatttcccttatgttatgaggtcaaaagagcatatttccctaaatatagggggtcacttttgccattttttttaatagggagccaaaa 13080938  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  13080937 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 13080894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 22447905 - 22448052
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||| |||||||||||| |        |||||||||||||||    
T  22447905 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgccatattttttaatagggggccaaaa 22448004  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    | |||||||||| ||| ||||||||||||||| | |||||| ||||||    
T  22448005 ttgcaacattttaaaacttagagggcgaaaagtgcagtttaacctaaa 22448052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 22500758 - 22500898
Alignment:
Q  35 tcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatc 134  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |        ||||||||| ||||||     
T  22500758 tcaaaaagcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcacttttgcca-tttttttaatagggggtcaaaatt 22500856  T
Q  135 gcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||| ||||||| |||| |||||| |||||||||||    
T  22500857 gcaacattttaaaatttaaagggtgaaaagtgaagtttagcc 22500898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 8339101 - 8339244
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||  ||||||||| || |||||| ||||||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  8339101 ggtcaaaaagcatatttctattatgttaggaggtcaaaaaagcatatttccctaaacataaggggtcacttttgccattttttttaatagggggccaaaa 8339200  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    | |||||||||||||| ||||||||||||||| |||||||||||    
T  8339201 ttgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 8339244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 173
Target Start/End: Original strand, 23428780 - 23428920
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  23428780 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 23428879  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagttta 173  Q
    | | |||||||||||| |||| |||||||||  ||||||||    
T  23428880 ttgtaacattttgaaacttagggggcgaaaaatgaagttta 23428920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 30155306 - 30155450
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||||||||||| |||||||||| |        ||||||||  |||||    
T  30155306 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcacttttgcca--ttttttaataggggatcaaaa 30155403  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||| ||| ||||||||||||||   |||||||||||||    
T  30155404 tcgcaacattttaaaacttagagggcgaaaaataaagtttagcctaa 30155450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 10743550 - 10743408
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | | |||||||||||||| ||||||||||||| |||||||||| |         |||||||||||||||    
T  10743550 ggtcaaaaaacatatttcccttatgttaggggtt-aaaagagcatatttccctaaacatagggagtcacttttg-tcatttttttaatagggggccaaaa 10743453  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||| ||| |||| |||||||||| | ||||||||||    
T  10743452 tcgcaacattttaaaacttagggggcgaaaagaggagtttagcct 10743408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 28173890 - 28174005
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| ||||||||||| || ||| |||||| |        |||||||||||||||    
T  28173890 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagaggatcatttttgccattttttttaatagggggccaaaa 28173989  T
Q  133 tcgcaacattttgaaa 148  Q
    ||||||||||||||||    
T  28173990 tcgcaacattttgaaa 28174005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 28155039 - 28155107
Alignment:
Q  29 aagaggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacataggggg 97  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| ||||    
T  28155039 aagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatgggg 28155107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 33279754 - 33279876
Alignment:
Q  41 agcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaaca 140  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||||| || ||| ||||||||| |        ||||||||| |||||||||||||    
T  33279754 agcatatttcccttatgttagggggtcaaaagagcatattttcctaaaca-agagggccacttttgccattttttttaatagggggtcaaaatcgcaaca 33279852  T
Q  141 ttttgaaatttagagggcgaaaag 164  Q
    |||| ||| |||| ||||||||||    
T  33279853 ttttaaaacttagggggcgaaaag 33279876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 20001842 - 20001778
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||    
T  20001842 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgc 20001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 35 - 164
Target Start/End: Original strand, 25022826 - 25022952
Alignment:
Q  35 tcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatc 134  Q
    ||||||| ||||| ||||||||||||   | |||||||||||||||| ||||||||||||||||||||||||| |        ||||  |||||||||||    
T  25022826 tcaaaaaacatatatcccttatgttatggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca---tttttaataaagggccaaaatc 25022922  T
Q  135 gcaacattttgaaatttagagggcgaaaag 164  Q
    | |||||||||||| |||| ||||||||||    
T  25022923 gtaacattttgaaacttagtgggcgaaaag 25022952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 48860845 - 48860773
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcactttt 105  Q
    ||||||||| |||||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||| ||||    
T  48860845 ggtcaaaaaacatatttcccttatgttagaaggtcaaaatagcatatttccctaaacataaggggtcattttt 48860773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 40836340 - 40836488
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnn-aatagggggccaaa 131  Q
    ||||||||| |||||||||||||| ||||  | |||||||| ||||||| |||||||||  |||||||||||||| |         ||||||||| ||||    
T  40836340 ggtcaaaaaacatatttcccttatattagggggtcaaaagaacatatttccctaaacat--ggggtcacttttgccatttttttttaatagggggtcaaa 40836437  T
Q  132 atcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    ||||||||||||| ||| |||| |||||||||  | |||||||||||||||    
T  40836438 atcgcaacattttaaaacttagggggcgaaaaatgcagtttagcctaaaaa 40836488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 32960811 - 32960914
Alignment:
Q  73 agcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagttt 172  Q
    ||||||||| ||||||||||||||||||||||||| |        |||||||| |||||||||||||||||||||| ||    ||||||||| |||||||    
T  32960811 agcatatttccctaaacatagggggtcacttttgccattttttttaataggggaccaaaatcgcaacattttgaaactt----ggcgaaaagtgaagttt 32960906  T
Q  173 agcctaaa 180  Q
    ||||||||    
T  32960907 agcctaaa 32960914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 3781021 - 3780950
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||| |||||||||  ||||||||||||||    
T  3781021 ggtcaaaaagcatatttcccttatgttag-gggtcaaaagagcatatttccctaaacat--ggggtcacttttgc 3780950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 46673209 - 46673282
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||| |||||||||||||||||||    |||||||||||||||| |||||||||||||| ||||||||||    
T  46673209 ggtcaaaaa-catatttcccttatgttagggagtcaaaagagcatatttccctaaacataggggatcacttttgc 46673282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 9496381 - 9496450
Alignment:
Q  36 caaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||||||||||| |||||||||| | |||||||||||||||| |||||||||  | ||||||||||||    
T  9496381 caaaaagcatatttcctttatgttagagggtcaaaagagcatatttccctaaacat--gtggtcacttttgc 9496450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 22416477 - 22416401
Alignment:
Q  33 ggtcaaaa-agcatatttcccttatgttagaagctcaaaagagcatattttcctaaaca-tagggggtcacttttgc 107  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||| | |||||||| | |||||||||||||||    
T  22416477 ggtcaaaagagcatatttaccttatgttagaaggtcaaaagagcatatatccctaaacattggggggtcacttttgc 22416401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 34878587 - 34878524
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    |||||||||||||||||||||||||||||||  ||| |||||| ||| | ||||||||||||||    
T  34878587 aatagggggccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcctaaaa 34878524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 34878692 - 34878754
Alignment:
Q  35 tcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacataggggg 97  Q
    |||||||||||||||||||||| ||||  | |||||||||||||||| ||||||| |||||||    
T  34878692 tcaaaaagcatatttcccttatattagggggtcaaaagagcatatttccctaaacttaggggg 34878754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 26628083 - 26628018
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaat 183  Q
    |||||||||||||||| ||||||||||||||  ||| |||||||||| | ||||||||||| ||||    
T  26628083 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcctagaaat 26628018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 4775983 - 4775852
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnna-atagggggccaaaatcgcaacat 141  Q
    |||||||||| ||||| ||  | |||||| ||||||||| ||||||||| ||||||||||||||| |          ||||||||||||||| |||||||    
T  4775983 catatttcccgtatgtgagggggtcaaaatagcatatttccctaaacat-gggggtcacttttgccaatttttttttatagggggccaaaattgcaacat 4775885  T
Q  142 tttgaaatttagagggcgaaaagggaagtttag 174  Q
    ||||||| |||||||| |||||| | |||||||    
T  4775884 tttgaaacttagagggtgaaaagtgtagtttag 4775852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 22447798 - 22447738
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| ||||||||||||||  ||| |||||||||| | |||||||||||    
T  22447798 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagccta 22447738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 26127070 - 26127139
Alignment:
Q  36 caaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||||||| ||||||||| | |||||| | ||||||| |||||||||  ||||||||||||||    
T  26127070 caaaaagcatatttcccctatgttagagggtcaaaataacatatttccctaaacat--ggggtcacttttgc 26127139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 26177120 - 26177189
Alignment:
Q  36 caaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||||||| ||||||||| | |||||| ||||||||| ||| |||||  ||||||||||||||    
T  26177120 caaaaagcatatttcccctatgttagagggtcaaaatagcatatttccctgaacat--ggggtcacttttgc 26177189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 20001954 - 20002012
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||| | ||||||||||    
T  20001954 aatagggggccaaaatcgcaacattttgaaacttag-gggagaaaagtgcagtttagcct 20002012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 26633520 - 26633663
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||| ||||||||||  | |||||||||||||||| |||||| ||  ||||||| |||||| |        ||||||||| |||||    
T  26633520 ggtcaaaaaacatatttctcttatgttagggg-tcaaaagagcatatttccctaaagat--ggggtcatttttgccattttttt-aatagggggtcaaaa 26633615  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    ||||||||||| |||| |||| ||| |||||| |  ||||||||||||    
T  26633616 tcgcaacatttagaaacttagggggtgaaaagtgccgtttagcctaaa 26633663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 28173787 - 28173720
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataa 185  Q
    ||||||||||||||||||||||||| |||||  ||| |||||||||| | | |||||||||| |||||    
T  28173787 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcctaataataa 28173720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 180
Target Start/End: Complemental strand, 36311283 - 36311148
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnn-aatagggggccaaaatcgcaacat 141  Q
    ||||||||||||||||||   | ||||||||| ||||||||||||| ||  |||||||||||||| |         |||||||| |||||||||||||||    
T  36311283 catatttcccttatgttatggggtcaaaagagtatattttcctaaatat--ggggtcacttttgccatttttttttaatagggg-ccaaaatcgcaacat 36311187  T
Q  142 tttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    ||| ||| |||| || ||||||| | |||||||||||||    
T  36311186 tttaaaacttaggggacgaaaagtgcagtttagcctaaa 36311148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 28154940 - 28154882
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||||||| ||||||||||||||  ||| |||||||||| | |||||||||    
T  28154940 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 28154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 1743495 - 1743556
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||| |||||||||||||||||| ||| |||| | |||||||| | ||||||||||||    
T  1743495 aataggggaccaaaatcgcaacattttaaaacttagggagcgaaaagtgcagtttagcctaa 1743556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 13081140 - 13081201
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||||||||||||||||||  |||  ||||||||| | | ||||||||||    
T  13081140 aatagggggccaaaatcgcaacattttgaaacataggaggcgaaaagcgcactttagcctaa 13081201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 33105073 - 33105013
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttt 104  Q
    |||||||| |||||| |||| | |||||||||||||||| ||||||||| ||||||||||||    
T  33105073 catatttctcttatgataga-gatcaaaagagcatatttccctaaacatggggggtcacttt 33105013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 46387745 - 46387808
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||||||||||||||  | |||||||||||| ||| | ||||||| |||||||||||||||    
T  46387745 catatttcccttatgttaggggatcaaaagagcatgtttccttaaacat-gggggtcacttttgc 46387808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 1743313 - 1743254
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||| ||||||| |||||||||||| |||| | |||||||| | ||||||||||    
T  1743313 aatagggggctaaaatcgaaacattttgaaacttagggtgcgaaaagtgcagtttagcct 1743254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 3328871 - 3328812
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| | ||||||||||||  ||| |||||||||| | ||||||||||    
T  3328871 aatagggggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcct 3328812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 25336409 - 25336358
Alignment:
Q  125 ggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    ||||||||| ||||||||||||||||||  |||||||||| | |||||||||    
T  25336409 ggccaaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagcc 25336358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 26633418 - 26633360
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||||| ||||||||||||||||| ||| |||| |||||||||| | ||||||||||    
T  26633418 aatagggggtcaaaatcgcaacattttaaaacttag-gggcgaaaagtgcagtttagcct 26633360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 8338998 - 8338952
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    ||||||||| |||||||||||||||||||||  ||| ||||||||||    
T  8338998 aatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaag 8338952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 32960698 - 32960640
Alignment:
Q  123 ggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    ||||||||||| ||||||||||||||  ||| |||||||||  | ||||||||||||||    
T  32960698 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgcagtttagcctaaaa 32960640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 4776064 - 4776109
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaa 163  Q
    |||| |||||||||||||||||||||| ||  ||||||||||||||    
T  4776064 aataaggggccaaaatcgcaacattttaaatcttagagggcgaaaa 4776109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 22500654 - 22500594
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| |||| |||||||||  ||| || ||||||| | |||||||||||    
T  22500654 aatagggggccaaaattgcaatattttgaaacataggggccgaaaagtgcagtttagccta 22500594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 25179821 - 25179881
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||| |||||||| |||||||||||||||||  ||| |||||||||| | | |||||||||    
T  25179821 aataaggggccaatatcgcaacattttgaaacatagggggcgaaaagtgcactttagccta 25179881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 24962096 - 24961951
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  24962096 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 24961997  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    || ||||||||||||| ||||||||||||||| |||||||||||||    
T  24961996 tcacaacattttgaaacttagagggcgaaaagtgaagtttagccta 24961951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 4059683 - 4059829
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||| ||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||| |        |||||||||| ||||    
T  4059683 ggtcaaaaaacatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttgccattttttttaatagggggctaaaa 4059782  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  4059783 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctaa 4059829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 3616942 - 3616798
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||| |  || |||||||||||||||| |||||||||||| |||||||||||| |        |||||||||||||||    
T  3616942 ggtcaaaaaacatatttcccttatgtgaagaggtcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagggggccaaaa 3616843  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||    
T  3616842 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcct 3616798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 29676222 - 29676070
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||||| |||||||||| || ||| |||||||||||| |||||||||||||| ||||||||||||        |||| |||||| |||    
T  29676222 ggtcaaaaagcatatttcacttatgttaggagatcacaagagcatatttccctaaacataggggatcacttttgctattctttttaatatggggcctaaa 29676123  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataa 185  Q
    | |||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  29676122 ttgcaacattttgaaacttagagggcgaaaagtgaagtttagcctataaataa 29676070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 24196404 - 24196259
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||  ||||||||| |||||||||||||| |        ||||| |||||||||    
T  24196404 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttctctaaacatatggggtcacttttgccattttttttaatagagggccaaaa 24196305  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| |||| |||||||||| | |||||||||||    
T  24196304 tcgcaacattttgaaacttagggggcgaaaagtggagtttagccta 24196259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 28920832 - 28920958
Alignment:
Q  53 ttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacattttgaaattta 152  Q
    ||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||| |||    
T  28920832 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaactta 28920931  T
Q  153 gagggcgaaaagggaagtttagcctaa 179  Q
    | |||||||||| ||||||||||||||    
T  28920932 gggggcgaaaagtgaagtttagcctaa 28920958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 33 - 164
Target Start/End: Original strand, 46432377 - 46432508
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  46432377 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 46432476  T
Q  133 tcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||||||||||| |||  ||||||||||    
T  46432477 tcgcaacattttgaaacttaaggggcgaaaag 46432508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 24749941 - 24749809
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgcta-nnnnnnnnaatagggggccaaa 131  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||||||||||||||||| |         ||||| ||||||||    
T  24749941 ggtcaaaaagcatatttcccttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttttaatagtgggccaaa 24749842  T
Q  132 atcgcaacattttgaaatttagagggcgaaaag 164  Q
    ||||||||||||||||| ||||||| |||||||    
T  24749841 atcgcaacattttgaaacttagaggacgaaaag 24749809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 43706815 - 43706957
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||   | |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  43706815 ggtcaaaaaacatatttcccttatgttatggg-tcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 43706913  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||| ||| |||| |||| ||||| | |||||||||    
T  43706914 tcgcaacattttaaaaattagggggcaaaaagtggagtttagcc 43706957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 48472024 - 48472165
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||| |||||||||||||||||| |||||| |        ||||  |||| ||||    
T  48472024 ggtcaaaaagcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcaattttgccattttttttaata--gggctaaaa 48472121  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    | |||| ||||||||| ||||||||||||||| || ||||||||    
T  48472122 ttgcaatattttgaaacttagagggcgaaaagtgatgtttagcc 48472165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 19078086 - 19078228
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  19078086 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca-tttttttaatagggggccaaaa 19078183  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    | ||||||||||||||  |||||||| ||||| | || |||||||    
T  19078184 ttgcaacattttgaaacatagagggcaaaaagtgcagcttagcct 19078228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 19125976 - 19126118
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  19125976 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca-tttttttaatagggggccaaaa 19126073  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    | ||||||||||||||  |||||||| ||||| | || |||||||    
T  19126074 ttgcaacattttgaaacatagagggcaaaaagtgcagcttagcct 19126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 2425362 - 2425225
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgc 136  Q
    ||||| |||||||||||||||||||| | ||||||||||||| || |||||||||| |||||||||||||| |        ||||||||| |||||||||    
T  2425362 aaaaaacatatttcccttatgttagagggtcaaaagagcata-ttccctaaacata-ggggtcacttttgccattttttttaatagggggtcaaaatcgc 2425265  T
Q  137 aacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||| ||||  ||| ||||| | |||||||||    
T  2425264 aacattttgaaacttaggtggcaaaaagtggagtttagcc 2425225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 51719286 - 51719427
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgc 136  Q
    ||||| ||||||| |||||||||||  | |||||||||||||||| |||||||||| |||||||||||||| |        ||||||| |||||||||||    
T  51719286 aaaaaacatattttccttatgttaggggatcaaaagagcatatttccctaaacataaggggtcacttttgcca-tttttttaatagggagccaaaatcgc 51719384  T
Q  137 aacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||| ||||  | | ||||| | ||||||||||||    
T  51719385 aacattttgaaacttaggtgacaaaaagtggagtttagcctaa 51719427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 2657673 - 2657818
Alignment:
Q  33 ggtcaaaa-agcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaa 131  Q
    |||||||| ||||||||||| |||||||||  | |||| ||||||||||| ||||||||||||| ||||||||||| |        |||| |||| ||||    
T  2657673 ggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccctaaacatagggagtcacttttgccattttttttaata-ggggtcaaa 2657770  T
Q  132 atcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    ||||||| ||||||||| |||| |||||||||| | ||||||||||||    
T  2657771 atcgcaatattttgaaacttagggggcgaaaagtgtagtttagcctaa 2657818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 21148111 - 21148048
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    |||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||    
T  21148111 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 21148048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 4455208 - 4455277
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    ||||| ||||||||||||||||||   | |||||||||||||||||||||||||| |||| |||||||||    
T  4455208 aaaaatcatatttcccttatgttacggggtcaaaagagcatattttcctaaacattggggatcacttttg 4455277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 28750425 - 28750346
Alignment:
Q  29 aagaggtcaaaaagcatatttccc-ttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||| |||||| ||| |||||| |||||||||| | ||||||||||||||||| ||||||||  ||||||||||||||    
T  28750425 aagaggccaaaaaacatttttccccttatgttagagggtcaaaagagcatatttttctaaacatgaggggtcacttttgc 28750346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 16551702 - 16551656
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||    
T  16551702 aatagggggccaaaattgcaacattttgaaacttagagggcgaaaag 16551656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 51719181 - 51719119
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    |||||||||||||||| |||||||| |||||  |||||||||||||| | |||||||||||||    
T  51719181 aatagggggccaaaattgcaacattatgaaacatagagggcgaaaagtgcagtttagcctaaa 51719119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 16972096 - 16972157
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||| |||||||||||||||| ||| |||| |||||||||| | ||||||||||||    
T  16972096 aatagggggctaaaatcgcaacattttaaaacttagggggcgaaaagtgcagtttagcctaa 16972157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 2657571 - 2657507
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||| |||||||||||||||| ||| ||| ||||||||||| |||||| |||| |||||    
T  2657571 aatagggggctaaaatcgcaacattttaaaacttaaagggcgaaaagtgaagttaagccaaaaaa 2657507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 3617044 - 3617108
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||| ||||| ||||||||||||||  ||| |||||||||| ||||||||||| |||||    
T  3617044 aatagggggcgaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagccaaaaaa 3617108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 22786162 - 22786099
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||| ||||||||||| | |||||||||||||||| ||||||||| |||| ||||||||||    
T  22786162 catatttcacttatgttagatg-tcaaaagagcatatttccctaaacatgggggctcacttttgc 22786099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 2425469 - 2425532
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    ||||||||||||||||||||||||| |||||  ||| |||| ||||| | ||||||||||||||    
T  2425469 aatagggggccaaaatcgcaacattatgaaacatagggggcaaaaagtgcagtttagcctaaaa 2425532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 4059580 - 4059521
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||| | | ||||||||    
T  4059580 aatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 4059521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 21148193 - 21148248
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagttta 173  Q
    ||||||||||||||||||||||||||| |||||||| || ||||||| | ||||||    
T  21148193 aatagggggccaaaatcgcaacattttaaaatttaggggtcgaaaagtgcagttta 21148248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 29182172 - 29182234
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    |||||||||||||||||||  | ||||||||||||||||  ||||||||| |||||||||||||    
T  29182172 catatttcccttatgttagggg-tcaaaagagcatatttctctaaacataaggggtcacttttg 29182234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 28552363 - 28552317
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||| |||||||||||||||||||||| |||| ||||||||||    
T  28552363 aataggggaccaaaatcgcaacattttgaaacttagggggcgaaaag 28552317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 51685809 - 51685871
Alignment:
Q  119 atagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    |||| |||||||||||||||| |||||||| |||||||| |||||| | | ||||||||||||    
T  51685809 atagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagcctaaaa 51685871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 16551838 - 16551879
Alignment:
Q  66 tcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  16551838 tcaaaagagcatatttccctaaacattgggggtcacttttgc 16551879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 179
Target Start/End: Original strand, 18606857 - 18606990
Alignment:
Q  45 tatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacatttt 144  Q
    ||||| ||||||||||   | |||||||||||||||| |||||||||  |||||||||||| | |        ||||||||| ||||||| |||||||||    
T  18606857 tattttccttatgttatggggtcaaaagagcatatttccctaaacatgaggggtcactttttccagtttttt-aatagggggtcaaaatcacaacatttt 18606955  T
Q  145 gaaatttagagggcgaaaagggaagtttagcctaa 179  Q
     ||| |||| || ||||||| | ||||||||||||    
T  18606956 aaaacttaggggtcgaaaagtgtagtttagcctaa 18606990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 27092906 - 27092841
Alignment:
Q  123 ggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataacta 188  Q
    ||||||||||||| ||||||||||||  ||| |||||| ||| | ||||||||||||||| |||||    
T  27092906 ggggccaaaatcgtaacattttgaaacatagggggcgagaagtgcagtttagcctaaaaaaaacta 27092841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 43706712 - 43706655
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagc 175  Q
    ||||||||||||||||||||||||| |||||  ||| |||||||||| | ||||||||    
T  43706712 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagc 43706655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 50334776 - 50334719
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagc 175  Q
    |||||||||||||||| |||||||||| ||| |||| |||||||||| | ||||||||    
T  50334776 aatagggggccaaaattgcaacattttaaaacttagggggcgaaaagtggagtttagc 50334719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 46432274 - 46432214
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||||||||||||||||||||| |||||  ||| |||||||||| | | |||||||||    
T  46432274 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagccta 46432214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 24196507 - 24196566
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||||||||||||||||||||||| |||  |||  ||||||||| | ||||||||||    
T  24196507 aatagggggccaaaatcgcaacattttaaaacataggaggcgaaaagtgcagtttagcct 24196566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 148
Target Start/End: Complemental strand, 48471921 - 48471891
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaa 148  Q
    |||||||||||||||||||||||||||||||    
T  48471921 aatagggggccaaaatcgcaacattttgaaa 48471891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 16878931 - 16878987
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttag 174  Q
    |||||||| |||||||| ||||||||||||| ||||  ||||||||| | |||||||    
T  16878931 aataggggaccaaaatctcaacattttgaaacttaggtggcgaaaagtgcagtttag 16878987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 24962199 - 24962263
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||||||||  ||||||||||||||  ||| ||||||||||   ||||||||| |||||    
T  24962199 aatagggggccaaaactgcaacattttgaaacatagggggcgaaaagtacagtttagccaaaaaa 24962263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 20636762 - 20636614
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  20636762 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 20636663  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    |||||||||||| ||| ||||||||| ||||| ||||||||||||||||    
T  20636662 tcgcaacattttaaaacttagagggcaaaaagtgaagtttagcctaaaa 20636614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 20638634 - 20638486
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  20638634 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 20638535  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    |||||||||||| ||| ||||||||| ||||| ||||||||||||||||    
T  20638534 tcgcaacattttaaaacttagagggcaaaaagtgaagtttagcctaaaa 20638486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 21224513 - 21224658
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||          || |||||| |||||    
T  21224513 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcctttttttttaacagggggtcaaaa 21224612  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||    
T  21224613 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 21224658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 27869356 - 27869501
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||  ||||||    
T  27869356 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggctccaaaa 27869455  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||    
T  27869456 tcgcaacattttgaaacttagagggcgaaaagtgaagtttaaccta 27869501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 33 - 191
Target Start/End: Complemental strand, 42271475 - 42271318
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||| ||||||||    
T  42271475 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaataggaggccaaaa 42271377  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataactaatt 191  Q
    |||||||||||||||| ||||||||||||||  ||| ||||||| ||||| || |||||    
T  42271376 tcgcaacattttgaaacttagagggcgaaaaatgaaatttagccaaaaaagaattaatt 42271318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 185
Target Start/End: Original strand, 3562594 - 3562745
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  3562594 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccattttttttaatagggggccaaaa 3562692  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataa 185  Q
    ||| |||||||||||| ||||||| ||||||| |||||||| ||||| |||||    
T  3562693 tcgtaacattttgaaacttagaggacgaaaagtgaagtttaacctaagaataa 3562745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 17305907 - 17305764
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgcta-nnnnnnnnaatagggggccaaa 131  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| |         ||||||||||||||    
T  17305907 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacata-ggggtcacttttgccatttttttttaatagggggccaaa 17305809  T
Q  132 atcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||    
T  17305808 atcgcaacattttgaaacttagaggacgaaaagtgaagtttagcc 17305764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 24597676 - 24597819
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||||||||||||| |||||||| |        ||||||||| |||||    
T  24597676 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggttacttttgccattttttttaatagggggacaaaa 24597775  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||    
T  24597776 tcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 24597819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 8526939 - 8526791
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||| |        ||||||||| |||||    
T  8526939 ggtcaaaaagcatatttcccttatgttaggaggtcaaatgagcatattttcctaaacatagggggtcatttttgccatttttattaatagggggtcaaaa 8526840  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    | |||| ||||||||| |||||||| |||||| ||| ||||||||||||    
T  8526839 ttgcaaaattttgaaacttagagggtgaaaagtgaaatttagcctaaaa 8526791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 19919764 - 19919911
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||| ||||||||||| || |||||||||||||||| ||||||||| |||||||||||||||          ||||||||| |||||    
T  19919764 ggtcaaaaaacatattttccttatgttaggaggtcaaaagagcatattt-cctaaacat-gggggtcacttttgcctttttttttaatagggggtcaaaa 19919861  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  19919862 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctaaaaa 19919911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 2331155 - 2331015
Alignment:
Q  34 gtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaat 133  Q
    |||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||| |||||||||||    
T  2331155 gtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaataaggggccaaaat 2331057  T
Q  134 cgcaacattttgaaatttagagggcgaaaagggaagtttagc 175  Q
     |||||||||| ||| ||||||| ||||||| ||||||||||    
T  2331056 tgcaacattttaaaacttagaggacgaaaagtgaagtttagc 2331015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 19195374 - 19195517
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||| ||||| ||||||||||||||||||||||||| |        ||||||||| |||||    
T  19195374 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcgtatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaa 19195473  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    | |||||||||| ||| |||||||| |||||| |||||||||||    
T  19195474 ttgcaacattttaaaacttagagggtgaaaagtgaagtttagcc 19195517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 31494053 - 31493910
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  31494053 ggtcaaaaagcatattttccttatgttagagggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttgttaatagggggccaaaa 31493955  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||| |||||||||||| |||| || ||||||| | ||||||||||    
T  31493954 tcgtaacattttgaaacttaggggccgaaaagtggagtttagcct 31493910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 18754427 - 18754572
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| ||||||||||| || |||||||||| |        |||||||| ||||||    
T  18754427 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagaggatcacttttgccattttttttaataggggaccaaaa 18754526  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| |||| |||||||||| | |||||| ||||    
T  18754527 tcgcaacattttgaaacttagggggcgaaaagtggagtttaaccta 18754572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 48176124 - 48176268
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| ||||||||||||| || |||||||| |        |||||||||||||||    
T  48176124 ggtcaaaaaacatatttcccttatgttagggg-tcaaaagagcatatttccctaaacatagggagttacttttgccattttttttaatagggggccaaaa 48176222  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| |||| ||||||||||   |||||||||||    
T  48176223 tcgcaacattttgaaacttagggggcgaaaagtagagtttagccta 48176268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 35337683 - 35337757
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||    
T  35337683 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgc 35337757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 41452410 - 41452540
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || ||| ||||| |||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  41452410 ggtcaaaaagcatatttcccttatgttaggaggtcagaagagtatatttccctaaacataaggggtcacttttgccattttttttaatagggggccaaaa 41452509  T
Q  133 tcgcaacattttgaaatttagagggcgaaaa 163  Q
    |  ||||||||||||| ||||||| ||||||    
T  41452510 ttacaacattttgaaacttagaggacgaaaa 41452540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 11843339 - 11843484
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||| |||||||||||  | |||||||||||||||| |||||||||||| |||||||||||| |        ||||||||| |||||    
T  11843339 ggtcaaaaagcatattttccttatgttagggg-tcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagggggtcaaaa 11843437  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||| |||  | ||||||||   ||||||||||||    
T  11843438 tcgcaacattttgaaacttaaggagcgaaaagtagagtttagcctaa 11843484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 13577947 - 13578090
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||| | |||||||| |||||||||||||| |        ||||| ||| |||||    
T  13577947 ggtcaaaaagcatatttcccttatgttag-gggtcaaaagagcatatttccttaaacata-ggggtcacttttgccattttttttaatagagggtcaaaa 13578044  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| |||| ||||||||||   |||||||||||    
T  13578045 tcgcaacattttgaaacttagggggcgaaaagtagagtttagccta 13578090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 37 - 182
Target Start/End: Original strand, 36746668 - 36746812
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgc 136  Q
    |||| ||||||||| |||||||||| || |||||||||||||||| ||||||||||| |||| ||||||||          |||||||||||||||| ||    
T  36746668 aaaaggcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagtgggttacttttgcctttttttttaatagggggccaaaattgc 36746767  T
Q  137 aacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||| |||  ||| |||||||||| | ||||||||| |||||    
T  36746768 aacattttaaaacatag-gggcgaaaagtgtagtttagccaaaaaa 36746812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 6798075 - 6798133
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacat 91  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||||| |||||||||    
T  6798075 ggtcaaaaatcatatttcccttatgttagagggtcaaaagagcatatttccctaaacat 6798133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 21225709 - 21225782
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||| |||||||||||||||||||||  | |||||||||||||||| ||||||||||| ||||| |||||||    
T  21225709 ggtcaaatagcatatttcccttatgttagggg-tcaaaagagcatatttccctaaacatagagggtcgcttttgc 21225782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 44078032 - 44078176
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||| |||||||||| || |||||||||||||||| |||||||||    ||||||||| || |        ||||||||| |||||    
T  44078032 ggtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatgataggtcactttcgccatttttttaaatagggggtcaaaa 44078131  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||| |||| ||| ||||||| | ||||| | |||||||||||    
T  44078132 tcgcaacgttttaaaacttagaggac-aaaagtgcagtttagccta 44078176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 3403223 - 3403286
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    |||||||||||||||||||  | ||||||||||||||||||||| ||||  |||||||||||||    
T  3403223 catatttcccttatgttagggggtcaaaagagcatattttcctatacatgaggggtcacttttg 3403286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 8527040 - 8527099
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| | | ||||||||    
T  8527040 aatagggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagcct 8527099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 26385408 - 26385260
Alignment:
Q  29 aagaggtcaaaa-agcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggc 127  Q
    |||||||||||| | |||||||| ||||||||||  | |||||| ||||||||| |||||||||   ||||||||||||| |        |||||||| |    
T  26385408 aagaggtcaaaatatcatatttctcttatgttagggg-tcaaaatagcatatttccctaaacatgatgggtcacttttgccatttttt--aataggggac 26385312  T
Q  128 caaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    ||||| ||||| |||||||||||||| || ||||||| | ||||||||||||    
T  26385311 caaaaacgcaatattttgaaatttaggggacgaaaagtgcagtttagcctaa 26385260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 39182066 - 39181939
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacatt 142  Q
    ||||||||||||||||||   | |||||||||||||||| |||||||||  ||||||| |||||| |        |||||| ||||||||||||||||||    
T  39182066 catatttcccttatgttat--ggtcaaaagagcatatttccctaaacat--ggggtcatttttgccattttttttaataggaggccaaaatcgcaacatt 39181971  T
Q  143 ttgaaatttagagggcgaaaagggaagtttag 174  Q
    || ||| || |||||| ||||| | |||||||    
T  39181970 ttaaaacttggagggccaaaagtgcagtttag 39181939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 14624745 - 14624607
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||| |||||||||||||||||   | ||||||||||||||||||||||||||   |||| |||||||| |        |||| ||||||||||    
T  14624745 ggtcaaaaagtatatttcccttatgttatggg-tcaaaagagcatattttcctaaacat--tgggttacttttgcca--ttttttaata-ggggccaaaa 14624652  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||| ||||||||| |||| || ||||||| | ||||||||||    
T  14624651 tcgcaatattttgaaacttaggggacgaaaagtgtagtttagcct 14624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 31494156 - 31494223
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataa 185  Q
    |||||||||||||||||||||||||||||||  ||||| |||||||  | ||||||||| | ||||||    
T  31494156 aatagggggccaaaatcgcaacattttgaaacatagagtgcgaaaaatgcagtttagccaataaataa 31494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 26385507 - 26385569
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    ||||||||||||||||||||||||||||||| |||| ||||  |||| | |||||| ||||||    
T  26385507 aatagggggccaaaatcgcaacattttgaaacttagggggcagaaagtgcagtttatcctaaa 26385569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 33237465 - 33237411
Alignment:
Q  127 ccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    |||||||||||||||||| |||||||||||| ||||||   ||||||||||||||    
T  33237465 ccaaaatcgcaacattttaaaatttagagggtgaaaagtacagtttagcctaaaa 33237411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 10023945 - 10024010
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggt 98  Q
    |||||||||  |||||| |||||||| ||  | |||||||||||||||| ||||||||||||||||    
T  10023945 ggtcaaaaaaaatattttccttatgtaagggggtcaaaagagcatatttccctaaacatagggggt 10024010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 13577845 - 13577789
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttag 174  Q
    |||||||||||||||||||||||||||||||  ||||| |||| ||| | |||||||    
T  13577845 aatagggggccaaaatcgcaacattttgaaacatagagagcgagaagtgcagtttag 13577789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 43251397 - 43251349
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacat 91  Q
    |||||||||||||||||||| | ||||||||| | ||||||||||||||    
T  43251397 catatttcccttatgttagagggtcaaaagagtacattttcctaaacat 43251349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 48176021 - 48175957
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcg-aaaagggaagtttagcctaaaa 181  Q
    ||||||||||||||||||||||||| |||||  ||| ||||| ||||| | ||||||||||||||    
T  48176021 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaaagtgcagtttagcctaaaa 48175957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 5111571 - 5111512
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcactttt 105  Q
    |||||||||||||||||||  | |||||||| |||||||||||||||||  ||||||||||||    
T  5111571 catatttcccttatgttagggg-tcaaaagaacatattttcctaaacat--ggggtcactttt 5111512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 11843236 - 11843177
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||| |||||||||||||||||||||||  ||| |||||| ||| | ||||||||||    
T  11843236 aatagggagccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcct 11843177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 20636864 - 20636923
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||||| |||||||||||||||||||||  ||| |||||||||| | | ||||||||    
T  20636864 aatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 20636923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 24597575 - 24597512
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    ||||||||||||||||| |||||||||||||  |||  ||||||||| | | ||||||||||||    
T  24597575 aatagggggccaaaatcacaacattttgaaacataggaggcgaaaagtgcactttagcctaaaa 24597512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 27869254 - 27869195
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||||| |||||||||||||||||||||  ||| |||||||||| | | ||||||||    
T  27869254 aatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 27869195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 148
Target Start/End: Complemental strand, 3562491 - 3562461
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaa 148  Q
    |||||||||||||||||||||||||||||||    
T  3562491 aatagggggccaaaatcgcaacattttgaaa 3562461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 19919662 - 19919616
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||| |||||||||||||||||||||| |||| ||| ||||||||||    
T  19919662 aataaggggccaaaatcgcaacattttaaaatatagggggcgaaaag 19919616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 95
Target Start/End: Complemental strand, 5348168 - 5348139
Alignment:
Q  66 tcaaaagagcatattttcctaaacataggg 95  Q
    ||||||||||||||||||||||||||||||    
T  5348168 tcaaaagagcatattttcctaaacataggg 5348139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 19493562 - 19493607
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaa 163  Q
    ||||||||| ||||||||||||||||| ||| ||| ||||||||||    
T  19493562 aatagggggtcaaaatcgcaacattttaaaacttaaagggcgaaaa 19493607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 24448103 - 24448038
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaat 183  Q
    ||||||||  ||||||||||||||||| ||| || | |||||||||| | ||||||||||| ||||    
T  24448103 aataggggatcaaaatcgcaacattttaaaacttggggggcgaaaagtgcagtttagcctataaat 24448038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 24464708 - 24464646
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||||||||||||||  | |||||||| ||||||| |||||||||  ||||||||| ||||    
T  24464708 catatttcccttatgttagggggtcaaaagaacatatttccctaaacat--ggggtcactcttgc 24464646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 9157222 - 9157269
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacat 91  Q
    |||||||| ||||||||||  | ||||||||||||||||||||||||||    
T  9157222 catatttcacttatgttagggg-tcaaaagagcatattttcctaaacat 9157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 10023844 - 10023784
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||||| |||| |||||||||||| |||| ||| |||||||||| | |||||| ||||    
T  10023844 aatagggggtcaaactcgcaacattttaaaatatagggggcgaaaagtgcagtttaaccta 10023784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 15681730 - 15681682
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacat 91  Q
    |||| ||||||||||||||  | |||||||||||||||| |||||||||    
T  15681730 catagttcccttatgttagggggtcaaaagagcatatttccctaaacat 15681682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 15681878 - 15681934
Alignment:
Q  120 tagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||| |||||||||||||||||||||||| |||| || | ||||| | |||||||||    
T  15681878 taggaggccaaaatcgcaacattttgaaacttaggggtctaaaagtgcagtttagcc 15681934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 42438034 - 42438078
Alignment:
Q  120 tagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||||||||||||||| | ||||||| |||||||| |||||    
T  42438034 tagggggccaaaatcgcaacttcttgaaatatagagggccaaaag 42438078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 7e-45; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 33 - 181
Target Start/End: Original strand, 41877187 - 41877333
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        ||||||| |||||||    
T  41877187 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca--ttttttaatagggagccaaaa 41877284  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  41877285 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctaaaa 41877333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 13397836 - 13397980
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  13397836 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 13397935  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    | |||| ||||||||| ||||||||||||||| ||||||||||||    
T  13397936 ttgcaatattttgaaacttagagggcgaaaagtgaagtttagcct 13397980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 4357395 - 4357252
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||||||||| |        ||||||| || ||||    
T  4357395 ggtcaaaaagcatatttcccttatgttagaaggtcaaaagagcatatttccctaaatatagggtgtcacttttgccattttttttaatagggagctaaaa 4357296  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  4357295 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 4357252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 5304508 - 5304652
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||| ||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        ||||| ||| |||||    
T  5304508 ggtcaaaaagcatattttccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca-tttttttaatagagggtcaaaa 5304605  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  5304606 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctaa 5304652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 35475432 - 35475286
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||||  ||||||||||||| |        ||||||| |||||||    
T  35475432 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata--gggtcacttttgccattttttttaatagggagccaaaa 35475335  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    |||||||||||| ||| ||||||||||||||  ||||||||||||||||    
T  35475334 tcgcaacattttaaaacttagagggcgaaaaatgaagtttagcctaaaa 35475286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 43793792 - 43793936
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  43793792 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgcca-tttttttaatagggggccaaaa 43793890  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| ||||  ||| ||||| | |||||||||||    
T  43793891 tcgcaacattttgaaacttaggcggcaaaaagtggagtttagccta 43793936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 25011878 - 25011735
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||  ||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  25011878 ggtcaaaaaacatatcccccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 25011779  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||||||| |||| || ||||||| | |||||||||    
T  25011778 tcgcaacattttgaaacttaggggacgaaaagtggagtttagcc 25011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 41034779 - 41034629
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||||| ||| | ||||||||||||||||||| |        |||| |||| |||||    
T  41034779 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagatcatatttccctgagcatagggggtcacttttgccattttttttaataaggggtcaaaa 41034680  T
Q  133 tcgcaacattttgaaa-tttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    | |||||||||||||| |||| || |||||||| |||||||||||||||||    
T  41034679 ttgcaacattttgaaactttaaagtgcgaaaagtgaagtttagcctaaaaa 41034629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 6789119 - 6789263
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||| |||| || ||||||| || || ||| ||||||||| ||||||||||||||||||||||||| |        || ||||||||||||    
T  6789119 ggtcaaaaaacatttttctctcatgttaggaggtcgaaacagcatatttccctaaacatagggggtcacttttgccattttatttaacagggggccaaaa 6789218  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||    
T  6789219 tcgcaacattttgaaacttaaagggcgaaaagtgaagtttagcct 6789263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 185
Target Start/End: Original strand, 9195825 - 9195975
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||   | |||||||||||||||| |||||||||||||||||||||||| |         |||||||| ||||||    
T  9195825 ggtcaaaaaacatatttcccttatgttatggg-tcaaaagagcatatttccctaaacatagggggtcacttttg-tcatttttttaataggggaccaaaa 9195922  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataa 185  Q
    ||||||||||||||||||||| |||||||||| |  ||||||||||| |||||    
T  9195923 tcgcaacattttgaaatttagggggcgaaaagtggtgtttagcctaagaataa 9195975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 2931464 - 2931321
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||| ||||||||  || |||||||||||||||| ||||||||||||||||||||||| | |        ||||| |  ||||||    
T  2931464 ggtcaaaaagcatatttcctttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcacttttaccattttttttaatagagaaccaaaa 2931365  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    | |||||||||| ||| ||||||||||||||| |||||||||||    
T  2931364 ttgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 2931321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 15058979 - 15059053
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||    
T  15058979 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgc 15059053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 55780529 - 55780381
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||| ||||| |||||  | |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  55780529 ggtcaaaaaacatattttccttaggttagggg-tcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 55780431  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||||  ||| |||  |||||||||  |||||||||||||||||    
T  55780430 tcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcctaaaaa 55780381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 55844709 - 55844561
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||| ||||| |||||  | |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  55844709 ggtcaaaaaacatattttccttaggttagggg-tcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 55844611  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||||  ||| |||  |||||||||  |||||||||||||||||    
T  55844610 tcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcctaaaaa 55844561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 4433344 - 4433485
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||| |||||||||||  | |||||||||||||||| |||||||||||||||||||||||||          |||| ||||||||||    
T  4433344 ggtcaaaaaacatattttccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcctttttttttaata-ggggccaaaa 4433442  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||| ||| |||| |||||||||| |||||||||||    
T  4433443 tcgcaacattttaaaacttag-gggcgaaaagtgaagtttagcc 4433485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 52838371 - 52838231
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||||||| |||||| |        |||| | || |||||    
T  52838371 ggtcaaaaagcatatttcccgtatgttaggaggtcaaaagagcata-tttcctaaacatagggggtcatttttgcca-tttttttaata-gaggtcaaaa 52838275  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||    
T  52838274 tcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 52838231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 18259357 - 18259417
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18259357 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagtgaagtttagccta 18259417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 25618790 - 25618901
Alignment:
Q  66 tcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagg 165  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |        ||||||||| |||||| |||||||||||||| |||||||||| ||||     
T  25618790 tcaaaagagcatatttccctaaacttagggggtcacttttgccatttttcttaatagggggtcaaaattgcaacattttgaaacttagagggcgcaaagt 25618889  T
Q  166 gaagtttagcct 177  Q
    ||||||||||||    
T  25618890 gaagtttagcct 25618901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 13826580 - 13826653
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| || ||||||| ||||||||||||||    
T  13826580 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttcccgaaacata-ggggtcacttttgc 13826653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 45633580 - 45633435
Alignment:
Q  33 ggtcaaaa-agcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaa 131  Q
    |||||||| ||||||||||| |||||||||  | |||| ||||||||||| ||||||||||||| ||||||||||| |        |||| |||| ||||    
T  45633580 ggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccctaaacatagggagtcacttttgccattttttttaata-ggggtcaaa 45633483  T
Q  132 atcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    ||||||| ||||||||| |||| |||||||||| | ||||||||||||    
T  45633482 atcgcaatattttgaaacttagggggcgaaaagtgtagtttagcctaa 45633435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 183
Target Start/End: Original strand, 19232509 - 19232655
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgc 136  Q
    ||||| ||||||| |||||||||||    |||||||||||||||| |||||||||| ||| |||||||||| |        |||||| | |||||||| |    
T  19232509 aaaaaacatattttccttatgttagggagtcaaaagagcatatttccctaaacatatgggatcacttttgccattttttttaataggtgaccaaaatcac 19232608  T
Q  137 aacattttgaaatttagagggcgaaaagggaagtttagcctaaaaat 183  Q
    |||||||||||| |||| |||| ||||| | ||||||||| ||||||    
T  19232609 aacattttgaaacttagggggcaaaaagtggagtttagccaaaaaat 19232655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 1588574 - 1588718
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| |||||||||||| |||||||||| | |        |||| | ||| ||||    
T  1588574 ggtcaaaaaacatatttcccttatgttagggg-tcaaaagagcatatttccctaaacataggaggtcactttttccatttttttaaatatgaggcgaaaa 1588672  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||| ||| |||  || ||||||| | |||||||||||    
T  1588673 tcgcaacattttaaaacttaagggacgaaaagtggagtttagccta 1588718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 4098789 - 4098726
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    |||||||||||||||||||  | |||||||||||||||| || |||||||||||||||||||||    
T  4098789 catatttcccttatgttagggggtcaaaagagcatatttcccaaaacatagggggtcacttttg 4098726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 27018357 - 27018229
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||| ||||||  | |||||||||||||||| ||||||||||  ||||||||||||| |        | ||||||| |||||    
T  27018357 ggtcaaaaaacatatttcccttttgttagggggtcaaaagagcatatttccctaaacata-tgggtcacttttgcca--ttttttattagggggtcaaaa 27018261  T
Q  133 tcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||||||| ||||||||  |||||||||    
T  27018260 tcgcaacattttaaaatttaggaggcgaaaag 27018229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 15734541 - 15734394
Alignment:
Q  33 ggtcaaaaagcatatttccc-ttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaa 131  Q
    |||||||| ||||||||||| |||||||||  | |||||||| ||||||| ||||||||||| |||||||||||| |         ||||| ||||||||    
T  15734541 ggtcaaaaggcatatttccccttatgttag--ggtcaaaagaacatatttccctaaacatagagggtcacttttg-tcatttttttaatagcgggccaaa 15734445  T
Q  132 atcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||| |||||||||||| |||  || ||||||| | |||||| ||||||||    
T  15734444 atcgtaacattttgaaacttaagggccgaaaagtgtagtttaacctaaaaa 15734394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 15795461 - 15795411
Alignment:
Q  32 aggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatatttt 82  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  15795461 aggtcaaaaagcctatttcccttatgttaggagttcaaaagagcatatttt 15795411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 43793689 - 43793629
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||||||||||||||||||||||| |||  ||| |||||||||| | |||||||||||    
T  43793689 aatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagccta 43793629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 45633682 - 45633746
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||| |||||||||||||||| ||| ||| ||||||||||| |||||| |||| |||||    
T  45633682 aatagggggctaaaatcgcaacattttaaaacttaaagggcgaaaagtgaagttaagccaaaaaa 45633746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 9397330 - 9397219
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgc 136  Q
    ||||| ||||||||| |||||||||| | |||||||||||||||| |||| |||| || | |||||||||| |        | |||||  ||||||||||    
T  9397330 aaaaaacatatttcctttatgttagagggtcaaaagagcatatttccctatacatgggagatcacttttgccattttttttactagggttccaaaatcgc 9397231  T
Q  137 aacattttgaaa 148  Q
    ||||||||||||    
T  9397230 aacattttgaaa 9397219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 4357497 - 4357543
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  4357497 aatagggggtcaaaatcgcaacattttgaaatatagggggcgaaaag 4357543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 24626275 - 24626221
Alignment:
Q  123 ggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||| ||||||||||||||||| ||| ||||||||||||||| | ||||||||||    
T  24626275 ggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgcagtttagcct 24626221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 48158731 - 48158681
Alignment:
Q  41 agcatatttcccttatgttagaagctcaaaagagcatattttcctaaacat 91  Q
    |||||||||||||||||||||| | |||||||| ||||||| |||||||||    
T  48158731 agcatatttcccttatgttagagggtcaaaagatcatatttccctaaacat 48158681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 4098902 - 4098966
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    ||||| ||||||||||||||||||||| ||| ||||||| | ||||| | ||||||||| |||||    
T  4098902 aatagagggccaaaatcgcaacattttaaaacttagaggtcaaaaagtgcagtttagccaaaaaa 4098966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 4433241 - 4433181
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||| |||||||||||||||||||| |||||  ||| |||||||||| | |||||||||||    
T  4433241 aataaggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagccta 4433181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 3927720 - 3927665
Alignment:
Q  122 gggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||||||||||||||||||| ||| |||||||| |||||| | | ||||||||    
T  3927720 gggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcct 3927665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 4099044 - 4099099
Alignment:
Q  127 ccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||||||||||| ||||||||||| | ||||| | ||||||||| |||||    
T  4099044 ccaaaatcgcaacattttaaaatttagaggtcaaaaagtgcagtttagccaaaaaa 4099099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 20919384 - 20919333
Alignment:
Q  127 ccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||||||||| |||| || ||||||| | |||||||||||    
T  20919384 ccaaaatcgcaacattttgaaacttaggggtcgaaaagtgcagtttagccta 20919333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 25011980 - 25012039
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| |||||||| |||||  ||| |||||||||| | ||||||||||    
T  25011980 aatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcct 25012039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 2715777 - 2715731
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||| |||||||||||||||||||||| | ||| |||||||||    
T  2715777 aataggggaccaaaatcgcaacattttgaaactaagatggcgaaaag 2715731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 3928902 - 3928960
Alignment:
Q  119 atagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||||||||||||||||| |||||||| |||| ||| |||||| | | ||||||||    
T  3928902 atagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 3928960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 9397435 - 9397493
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    ||||||||||||||||| ||||||||| ||| |||| ||| |||||| | |||||||||    
T  9397435 aatagggggccaaaatcccaacattttaaaacttagggggtgaaaagtgcagtttagcc 9397493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 23362570 - 23362500
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgcta 109  Q
    ||||||||||||| |||||||||| | | |||||||| ||||||| |||||  ||| |||||| |||||||||    
T  23362570 aaaaagcatattttccttatgttaaagggtcaaaagaacatatttccctaa--atatggggtcgcttttgcta 23362500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 47869899 - 47869944
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaa 163  Q
    ||||||||||||||||| |||||||||||||| ||| |||| ||||    
T  47869899 aatagggggccaaaatcacaacattttgaaatatagggggcaaaaa 47869944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 13826478 - 13826418
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||||| ||||||||||||||||| |||  ||| |||||||||| | | |||||||||    
T  13826478 aatagggggtcaaaatcgcaacatttttaaacatagggggcgaaaagtgcactttagccta 13826418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 17138540 - 17138592
Alignment:
Q  129 aaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    |||||||||||||||| ||| |||| |||||||||| | ||||||||| ||||    
T  17138540 aaaatcgcaacattttaaaacttagggggcgaaaagtggagtttagccaaaaa 17138592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 25685867 - 25685931
Alignment:
Q  120 tagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaata 184  Q
    |||||||||||||| ||||  |||||||| |||||||| |||||| | | |||||||||| ||||    
T  25685867 tagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaataata 25685931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 51291341 - 51291389
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacat 91  Q
    |||||||||||||||||||  | |||||||| ||||||| |||||||||    
T  51291341 catatttcccttatgttagggggtcaaaagaacatatttccctaaacat 51291389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 61957 - 61813
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  61957 ggtcaaaaagcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 61858  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  61857 tcgcaacattttgaaacttagaaggcgaaaagtgaagtttagcct 61813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 19425 - 19279
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||| |||||||||| |||||||||||||| |        ||||||||| |||||    
T  19425 ggtcaaaaagcatatttcccttatgttag-gggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca-tttttttaatagggggtcaaaa 19329  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||||||||| ||||  |||||||||   ||||||||| |||||    
T  19328 tcgcaacattttgaaacttaggaggcgaaaagtagagtttagccaaaaaa 19279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 5e-43; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 17648386 - 17648242
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        ||||||| |||||||    
T  17648386 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggagccaaaa 17648287  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    || ||||||||||||| ||||||||||||||| ||||||||||||    
T  17648286 tcacaacattttgaaacttagagggcgaaaagtgaagtttagcct 17648242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 4519028 - 4519172
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        ||||||| |||||||    
T  4519028 ggtcaaaaaacatatttcccttatgttaggagatcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggagccaaaa 4519127  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||    
T  4519128 tcgcaacattttgaaacttagaggacgaaaagtgaagtttagcct 4519172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 30784425 - 30784568
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        |||| ||||||||||    
T  30784425 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatacggggtcacttttgccattttttttaataaggggccaaaa 30784524  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  30784525 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 30784568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 181
Target Start/End: Original strand, 12723422 - 12723570
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||||  ||||||||||||||||| |||||| |        |||||||||||||||    
T  12723422 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttctctaaacatagggggtcatttttgccattttttttaatagggggccaaaa 12723521  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||| ||||    
T  12723522 tcgcaacattttgaaacttagagggcgaaaagtgaagtttggccaaaaa 12723570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 44147114 - 44146971
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  44147114 ggtcaaaaagcatatttcccttatgttaggaggtcaaaatagcatatttccctaaacata-ggggtcacttttgccattttttttaatagggggccaaaa 44147016  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| || |||||||||||| ||||||||||||    
T  44147015 tcgcaacattttgaaacttggagggcgaaaagtgaagtttagcct 44146971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 8802561 - 8802703
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||| ||||||||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||| |        |||||||||||||||    
T  8802561 ggtcaaaaagc-tatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttgccattttttttaatagggggccaaaa 8802659  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||||||| |||||||||||||||  ||||||||||    
T  8802660 tcgcaacattttgaaacttagagggcgaaaagtaaagtttagcc 8802703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 178
Target Start/End: Original strand, 21929967 - 21930107
Alignment:
Q  36 caaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcg 135  Q
    |||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        ||||||||| ||||||||    
T  21929967 caaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca-tttttttaatagggggtcaaaatcg 21930064  T
Q  136 caacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  21930065 caacattttgaaacttagagggcgaaaagtgaagtttagccta 21930107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 38630198 - 38630053
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||||| | |        ||||||||  |||||    
T  38630198 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggagtcacttttaccattttttttaataggggatcaaaa 38630099  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| ||||||||||||||  |||||||| ||||    
T  38630098 tcgcaacattttgaaacttagagggcgaaaaatgaagtttaaccta 38630053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 5192428 - 5192572
Alignment:
Q  29 aagaggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggcc 128  Q
    ||||||||||||| ||||||||||||||||||  || |||||||||||||||| |||||||||||| |||||||||||| |        ||||| || ||    
T  5192428 aagaggtcaaaaaacatatttcccttatgttaagaggtcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagaggacc 5192527  T
Q  129 aaaatcgcaacattttgaaatttagagggcgaaaagggaagttta 173  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||||    
T  5192528 aaaatcgcaacattttaaaacttagagggcgaaaagtgaagttta 5192572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 19924408 - 19924260
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || ||| ||||| |||||| ||||||||||||||||||||||||| |        |||| ||||||||||    
T  19924408 ggtcaaaaagcatatttcccttatgttaggaggtcagaagagtatatttccctaaacatagggggtcacttttgccattttttttaataaggggccaaaa 19924309  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    | |||||||||| ||| ||||||||||||||| || |||||||| ||||    
T  19924308 ttgcaacattttaaaacttagagggcgaaaagtgaggtttagccaaaaa 19924260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 4807761 - 4807908
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatag-ggggtcacttttgctannnnnnnnaatagggggccaaa 131  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||||| | ||||||||| ||||||||||||||||        ||||||||||  ||    
T  4807761 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagaacatatttccttaaacatagaggggtcacttttgctattttttttaatagggggcataa 4807860  T
Q  132 atcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    ||||||||||||||||| ||| | ||||||||| ||||||||||||||    
T  4807861 atcgcaacattttgaaacttaaaaggcgaaaagtgaagtttagcctaa 4807908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 178
Target Start/End: Original strand, 22452330 - 22452479
Alignment:
Q  29 aagaggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggcc 128  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||| ||| | ||||||||||||          |||||||| ||    
T  22452330 aagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaatatatgaggtcacttttgccgttttttttaataggggacc 22452429  T
Q  129 aaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||| |||||||||||||| |||| ||||| | |||||||||||    
T  22452430 aaaatcgcaatattttgaaatttagggggctaaaagtggagtttagccta 22452479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 33895513 - 33895375
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgc 136  Q
    ||||| ||||||||||||||||||| || |||||||||||||||| |||||||||||||| |||||||||||         |||| ||  ||||||| ||    
T  33895513 aaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcacttttgct-ttttttttaatatggaaccaaaattgc 33895415  T
Q  137 aacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||| ||| ||||||||||||||| |||||||||||    
T  33895414 aacattttaaaacttagagggcgaaaagtgaagtttagcc 33895375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 19391548 - 19391622
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||    
T  19391548 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgc 19391622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 21666435 - 21666549
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||| ||||||||||| ||||||||| ||||||||||||||| |        |||||||||||||||    
T  21666435 ggtcaaaaaacatatttcccttatgttagggggtcaagagagcatatttccctaaacatggggggtcacttttgcca-tttttttaatagggggccaaaa 21666533  T
Q  133 tcgcaacattttgaaa 148  Q
    ||||||||||||||||    
T  21666534 tcgcaacattttgaaa 21666549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 18881664 - 18881812
Alignment:
Q  33 ggtcaaaa-agcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaa 131  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||| |||||||||   ||||||||||||| |        ||||||||| ||||    
T  18881664 ggtcaaaagagcgtatttcccttatgttagaagctcaaaatagcatatttccctaaacat---gggtcacttttgccattttttttaatagggggtcaaa 18881760  T
Q  132 atcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaat 183  Q
    || |||||||| | ||| |||| |||||||||| |  |||||||||||||||    
T  18881761 attgcaacattataaaacttagggggcgaaaagtgttgtttagcctaaaaat 18881812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 19392812 - 19392873
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  19392812 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctaa 19392873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 3380345 - 3380193
Alignment:
Q  29 aagaggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggcc 128  Q
    ||||||||||||| ||||||||||||||| |||| |  ||||||||||||||| ||||||||| |||||||||| ||  |         ||||||| |||    
T  3380345 aagaggtcaaaaaacatatttcccttatgctagagggacaaaagagcatatttacctaaacatggggggtcactatt-ttcatttttttaatagggagcc 3380247  T
Q  129 aaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||||||||||||| ||| |||| |||||  | ||||||||| |||||    
T  3380246 aaaatcgcaacattttgaaacttaaagggtgaaaaatgcagtttagccgaaaaa 3380193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 32400483 - 32400557
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||| ||||||||||||||||||||  | ||||||| ||||||||  ||||||||||||||||||||||||    
T  32400483 ggtcaaaaggcatatttcccttatgttagggggtcaaaagcgcatatttcactaaacatagggggtcacttttgc 32400557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 5192330 - 5192271
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| ||||||||||||||  ||| |||||||||| ||||||||||||    
T  5192330 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcct 5192271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 15869395 - 15869349
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||    
T  15869395 aataggggaccaaaatcgcaacattttaaaatttagagggcgaaaag 15869349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 33895619 - 33895684
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaat 183  Q
    |||||||| ||||||| |||||||||| |||| ||| |||||||||| | ||||||||||||||||    
T  33895619 aataggggaccaaaattgcaacattttaaaatatagggggcgaaaagtgcagtttagcctaaaaat 33895684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 4518927 - 4518857
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataacta 188  Q
    ||||||||||||||||||||| ||||| |||| ||| |||||||||| | | |||||||||| || |||||    
T  4518927 aatagggggccaaaatcgcaatattttaaaatatagggggcgaaaagtgcactttagcctaataaaaacta 4518857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 44147216 - 44147285
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataact 187  Q
    ||||||||||||||||||||| |||||||||  ||  |||||||||| | | |||||||||||| |||||    
T  44147216 aatagggggccaaaatcgcaatattttgaaacatatggggcgaaaagtgcactttagcctaaaattaact 44147285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 4807658 - 4807598
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| ||||||||||||||  |||  ||||||||| | |||||||||||    
T  4807658 aatagggggccaaaattgcaacattttgaaacataggaggcgaaaagtgcagtttagccta 4807598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 3208112 - 3208050
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    |||||||||||||||||||  | |||||||| ||||||| ||||||||||| || |||||||||    
T  3208112 catatttcccttatgttagggg-tcaaaagaacatatttccctaaacatagaggttcacttttg 3208050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 1824737 - 1824676
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||| |||||||||||  | |||||||||||||||| |||||||||  ||||||||||||||    
T  1824737 catattttccttatgttagggg-tcaaaagagcatatttccctaaacat--ggggtcacttttgc 1824676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 1859182 - 1859121
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||| |||||||||||  | |||||||||||||||| |||||||||  ||||||||||||||    
T  1859182 catattttccttatgttagggg-tcaaaagagcatatttccctaaacat--ggggtcacttttgc 1859121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 18881562 - 18881501
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    ||||||||||||||||||||||||||  ||| |||  || ||||||| | ||||||||||||    
T  18881562 aatagggggccaaaatcgcaacatttcaaaacttaagggtcgaaaagcgcagtttagcctaa 18881501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 32968510 - 32968453
Alignment:
Q  122 gggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||||| |||||||| |||| ||| |||||| | | ||||||||||    
T  32968510 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctaa 32968453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 38612277 - 38612216
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    ||||||||||||||||||||||||| ||||| |||| |||  ||||  | ||||||||||||    
T  38612277 aatagggggccaaaatcgcaacattgtgaaagttagggggtcaaaactgcagtttagcctaa 38612216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 38613417 - 38613478
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    ||||||||||||||||||||||||| ||||| |||| |||  ||||  | ||||||||||||    
T  38613417 aatagggggccaaaatcgcaacattgtgaaagttagggggtcaaaactgcagtttagcctaa 38613478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 38974849 - 38974784
Alignment:
Q  122 gggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataact 187  Q
    |||||||||||||||||| |||||||| |||| ||| |||||| | | ||||||| ||||| ||||    
T  38974849 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaaaaaaaaact 38974784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 39005947 - 39005882
Alignment:
Q  122 gggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataact 187  Q
    |||||||||||||||||| |||||||| |||| ||| |||||| | | ||||||| ||||| ||||    
T  39005947 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaaaaaaaaact 39005882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 2053197 - 2053145
Alignment:
Q  128 caaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    |||||| |||||||||| ||| ||||||||||||||| | |||||| ||||||    
T  2053197 caaaattgcaacattttaaaacttagagggcgaaaagagtagtttaacctaaa 2053145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 19391445 - 19391386
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||| ||||||| ||||||||||||||  ||| |||||||||| | |||||||||||    
T  19391445 aataggggaccaaaattgcaacattttgaaacatag-gggcgaaaagtgcagtttagccta 19391386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 30784323 - 30784259
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||| ||||||| ||||||||||||||  ||| |||| ||||| |||||||| ||| ||||    
T  30784323 aataggggaccaaaattgcaacattttgaaacctagggggcaaaaagtgaagtttaaccttaaaa 30784259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 31210937 - 31210793
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||  |        |||||| ||||||||    
T  31210937 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcacttttgtcattttttttaataggaggccaaaa 31210838  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||    
T  31210837 tcgcaacattttaaaacttagagggcgaaaagtgaagtttagcct 31210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 4597566 - 4597711
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||| |        |||||||||||||||    
T  4597566 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcatttttgccattttttataatagggggccaaaa 4597665  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    | |||||||||||||| ||||||||||||||| |||||||||||||    
T  4597666 ttgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 4597711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 24051151 - 24051006
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||| ||||||| |||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  24051151 ggtcaaaaagtatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaatagggggccaaaa 24051053  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  24051052 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctaa 24051006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 32451869 - 32451725
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||   ||||||||||||||||||||||| |        |||||||||||||||    
T  32451869 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttctataaacatagggggtcacttttgccattttttttaatagggggccaaaa 32451770  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    || ||||||||||||| ||||||||||||||| ||||||||||||    
T  32451769 tcacaacattttgaaacttagagggcgaaaagtgaagtttagcct 32451725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 33 - 176
Target Start/End: Original strand, 26710468 - 26710611
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||| ||||||| |        |||||||||||||||    
T  26710468 ggtcaaaaaacatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcgcttttgccattttttttaatagggggccaaaa 26710567  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  26710568 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 26710611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 18791500 - 18791355
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |        ||||| |||||||||    
T  18791500 ggtcaaaaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaatagagggccaaaa 18791402  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  18791401 tcgcaacattttaaaacttagagggcgaaaagtgaagtttagcctaa 18791355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 24603504 - 24603361
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        ||||||||  |||||    
T  24603504 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggagcaaaa 24603405  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||||||| ||| ||| ||||||| |||||||||||    
T  24603404 tcgcaacattttgaaacttaaaggacgaaaagtgaagtttagcc 24603361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 18749299 - 18749432
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacatt 142  Q
    ||||||||||||||||||  || |||||||||||||||| ||||||||||||||||||||||||| |        ||||||||| |||||||||||||||    
T  18749299 catatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaatcgcaacatt 18749398  T
Q  143 ttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||| ||||||||||||||| |||||||||||    
T  18749399 ttgaaacttagagggcgaaaagtgaagtttagcc 18749432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 34834068 - 34833920
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        ||||||||     ||    
T  34834068 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggcgaggaa 34833969  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    | |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  34833968 ttgcaacattttgaaacttagagggcgaaaagtgaagtttagcctaaaa 34833920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 22968315 - 22968460
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |        |||| ||||||||||    
T  22968315 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaata-ggggccaaaa 22968413  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||| |||  |||||||||| ||| ||||||||||    
T  22968414 tcgcaacattttgaaacttaaggggcgaaaagtgaactttagcctaa 22968460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 23820078 - 23819933
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |        |||| ||||||||||    
T  23820078 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaata-ggggccaaaa 23819980  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||| |||  |||||||||| ||| ||||||||||    
T  23819979 tcgcaacattttgaaacttaaggggcgaaaagtgaactttagcctaa 23819933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 25819827 - 25819685
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || ||| ||||| |||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  25819827 ggtcaaaaagcatatttcccttatgttaggaggtcagaagagtatatttccctaaacata-ggggtcacttttgccattttttttaatagggggccaaaa 25819729  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    | |||||||||| ||| ||||||||||||||| || ||||||||    
T  25819728 ttgcaacattttaaaacttagagggcgaaaagtgaggtttagcc 25819685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 15298626 - 15298500
Alignment:
Q  35 tcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatc 134  Q
    ||||||| ||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||| ||    
T  15298626 tcaaaaaacatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaatagggggccaaactc 15298528  T
Q  135 gcaacattttgaaatttagagggcgaaa 162  Q
    |||||||||||||| |||||||||||||    
T  15298527 gcaacattttgaaacttagagggcgaaa 15298500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 14572339 - 14572483
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  14572339 ggtcaaaaagcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacata-ggggtcacttttgcca-tttttttaatagggggccaaaa 14572436  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    | |||| ||||| ||| ||||||||||||||| | | ||||||||||    
T  14572437 ttgcaatattttaaaacttagagggcgaaaagtggactttagcctaa 14572483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 8412901 - 8412754
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | ||||||||||||||||  |||||||||||||||| ||||||| |        ||||||| |||||||    
T  8412901 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttctctaaacatagggggtcgcttttgccattttttttaatagggagccaaaa 8412802  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    |||||||||||||||| |||  ||||| |||| | | |||||||||||    
T  8412801 tcgcaacattttgaaacttaaggggcggaaagtggactttagcctaaa 8412754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 3118826 - 3118748
Alignment:
Q  29 aagaggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||| |||||||||||||||||||  | |||||||||||||||| ||||||||||| |||||||||||||    
T  3118826 aagaggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagagggtcacttttgc 3118748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 35102652 - 35102716
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacataggggg 97  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||    
T  35102652 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggg 35102716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 32682439 - 32682581
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||| ||||||||  || |||||||||||||||| |||||||||| ||||||||||||||||        ||||| |  ||||||    
T  32682439 ggtcaaaaaacatatttcctttatgttatgaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcta-tttttttaatagagaaccaaaa 32682536  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    | |||||||||| ||| |||||||| |||||| ||||||||||||    
T  32682537 ttgcaacattttaaaacttagagggtgaaaagtgaagtttagcct 32682581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 22269549 - 22269410
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||| | | |||||||| ||||||| |||||||||| |||||||||||||| |        ||||| |||||||||    
T  22269549 ggtcaaaaaacatatttcccttatgtta-agggtcaaaagaacatatttccctaaacata-ggggtcacttttgcca--ttttttaatagagggccaaaa 22269454  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||| ||||||||| ||||||| ||||||| | |||||||||    
T  22269453 tcgcaatattttgaaacttagaggacgaaaagtgcagtttagcc 22269410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 4013838 - 4013968
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacatt 142  Q
    |||||||||||||| ||||  | |||||||||||||||| ||||||||| ||||||||||||||  |        |||||||||||||||||||||||||    
T  4013838 catatttcccttatattagggggtcaaaagagcatatttccctaaacat-gggggtcacttttgacattttttt-aatagggggccaaaatcgcaacatt 4013935  T
Q  143 ttgaaatttagagggcgaaaagggaagtttagc 175  Q
    |||||| |||| || ||||||| | ||||||||    
T  4013936 ttgaaacttaggggacgaaaagtgcagtttagc 4013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 19282372 - 19282445
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    |||||||| |||||||||||||||||||| || |||||| ||||||||| | |||||||| |||||||||||||    
T  19282372 ggtcaaaatgcatatttcccttatgttaggagttcaaaatagcatatttacttaaacataaggggtcacttttg 19282445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 35102713 - 35102768
Alignment:
Q  122 gggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||| |||||||||||||| ||||||||||||||| |||||| |||||    
T  35102713 gggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagttgagcct 35102768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 4371032 - 4370967
Alignment:
Q  41 agcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||||||||||||||||  | |||||||||||||||| ||||||||| | |||||||||||||    
T  4371032 agcatatttcccttatgttagggg-tcaaaagagcatatttccctaaacatggagggtcacttttgc 4370967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 6842327 - 6842391
Alignment:
Q  119 atagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaat 183  Q
    ||||||||||||||| ||||| |||||||| |||||||| |||||| | | ||||||||||||||    
T  6842327 atagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcctaaaaat 6842391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 2058993 - 2059111
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacatt 142  Q
    |||||||||||||||||||    |||||| ||||||||| |||||||||   ||||||||||||| |        ||||||||| |||||||||||||||    
T  2058993 catatttcccttatgttagggtgtcaaaatagcatatttccctaaacatgaagggtcacttttgccatttttt--aatagggggtcaaaatcgcaacatt 2059090  T
Q  143 ttgaaatttagagggcgaaaa 163  Q
    || |||||||| | |||||||    
T  2059091 ttaaaatttagggagcgaaaa 2059111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 12427370 - 12427300
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||| ||||||||| ||||||||   | |||||||||||||||| ||||||||| |||| ||||||||||    
T  12427370 aaaaaacatatttcctttatgttaatggttcaaaagagcatatttccctaaacatgggggatcacttttgc 12427300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 15298730 - 15298775
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaa 163  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||    
T  15298730 aataaggggccaaaatcgcaacattttgaaacatagagggcgaaaa 15298775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 23124932 - 23124996
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||| |||||||||||||||||| ||||||||  || |||||| | | |||||||||||||    
T  23124932 aataggggaccaaaatcgcaacattttaaaatttaggaggtgaaaagtgcaatttagcctaaaaa 23124996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 35102549 - 35102489
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||| ||||||||||||||||||||  ||| |||||||||| | | |||||||||    
T  35102549 aatagggggctaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccta 35102489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 16415502 - 16415564
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    |||||||||||||||||||  | ||||||||  |||||| |||||||||| |||||||||||||    
T  16415502 catatttcccttatgttaggcggtcaaaagaatatatttccctaaacata-ggggtcacttttg 16415564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 4597463 - 4597417
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||| ||||||||||||||||||||||  ||| ||||||||||    
T  4597463 aataggggaccaaaatcgcaacattttgaaacatagggggcgaaaag 4597417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 12291475 - 12291430
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaa 163  Q
    |||| |||||||||||||||||||||||||| |||| || ||||||    
T  12291475 aataaggggccaaaatcgcaacattttgaaacttaggggacgaaaa 12291430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 20863891 - 20863932
Alignment:
Q  66 tcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||| |||||||||||| || ||||||||||||    
T  20863891 tcaaaagagcataatttcctaaacatgggaggtcacttttgc 20863932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 8821929 - 8821869
Alignment:
Q  120 tagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    |||||||||||||| ||||  |||||||| |||||||| |||||| | | |||||||||||    
T  8821929 tagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaaa 8821869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 18749155 - 18749095
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| |||||||||| |||  ||  |||||||||| | |||||||||||    
T  18749155 aatagggggccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagccta 18749095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 18749257 - 18749305
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattt 81  Q
    ||||||||||||||||||||||||||||  || ||||| || |||||||    
T  18749257 ggtcaaaaagcatatttcccttatgttatgaggtcaaatgaacatattt 18749305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 26240089 - 26240025
Alignment:
Q  43 catatttcccttatgtta-gaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    |||||||||||||||||| |  | |||||||||||||||| | |||||||  |||||||||||||    
T  26240089 catatttcccttatgttaagggggtcaaaagagcatatttccgtaaacatgaggggtcacttttg 26240025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 5810 - 5954
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  5810 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaaatagggggccaaaa 5909  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||| ||||||||| ||||||| ||||||| ||||||||||||    
T  5910 tcgcaatattttgaaacttagaggccgaaaagtgaagtttagcct 5954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 5708 - 5648
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||| ||||||||| | ||||||||||||  ||| |||||||||| | |||||||||||    
T  5708 aataggaggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagccta 5648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 3117 - 3264
Alignment:
Q  29 aagaggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggcc 128  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||||||| |||||||||||| |||||||||||| |        ||||||||| |    
T  3117 aagaggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagggggtc 3216  T
Q  129 aaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    ||||| |||||||||||||| ||||||||||||||| || ||||||||    
T  3217 aaaattgcaacattttgaaacttagagggcgaaaagtgaggtttagcc 3264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 3019 - 2973
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||    
T  3019 aatagggggccaaaatcgcaacattttgaaacatagggggcgaaaag 2973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 142104 - 142254
Alignment:
Q  29 aagaggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggcc 128  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        |||||||| ||    
T  142104 aagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccattttttttaataggggacc 142202  T
Q  129 aaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    ||||| |||||||||| ||| ||||||||||||||| |||||||| ||||||    
T  142203 aaaattgcaacattttaaaacttagagggcgaaaagtgaagtttaacctaaa 142254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 18695146 - 18695004
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        ||||||||| |||||    
T  18695146 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccattttttttaatagggggtcaaaa 18695048  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||    
T  18695047 tcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 18695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 26639198 - 26639342
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||| |||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        || ||||| ||||||    
T  26639198 ggtcaaaacgcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgccattttttttaacaggggaccaaaa 26639297  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||    
T  26639298 tcgcaacattttgaaacttagaggacgaaaagtgaagtttagcct 26639342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 245737 - 245591
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        |||||||||||||||    
T  245737 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca-tttttttaatagggggccaaaa 245640  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    | |||| ||||||||| ||||||||||||||| |||||||| |||||||    
T  245639 ttgcaatattttgaaacttagagggcgaaaagtgaagtttaacctaaaa 245591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 182
Target Start/End: Original strand, 23765553 - 23765699
Alignment:
Q  35 tcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatc 134  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| ||||||||||||   |        ||||||||||||||||     
T  23765553 tcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttatcattttttttaatagggggccaaaatt 23765651  T
Q  135 gcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  23765652 gcaacattttaaaacttagagggcgaaaagtgaagtttagcctaaaaa 23765699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 182
Target Start/End: Original strand, 23815401 - 23815547
Alignment:
Q  35 tcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatc 134  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| ||||||||||||   |        ||||||||||||||||     
T  23815401 tcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttatcattttttttaatagggggccaaaatt 23815499  T
Q  135 gcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  23815500 gcaacattttaaaacttagagggcgaaaagtgaagtttagcctaaaaa 23815547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 36641286 - 36641141
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||  ||||||||||||| |||||||||| |        |||||||| ||||||    
T  36641286 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttctctaaacataggggctcacttttgccattttttttaataggggaccaaaa 36641187  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    || ||| ||||||||| ||||| ||||||||| |||||||||||||    
T  36641186 tcacaatattttgaaacttagaaggcgaaaagtgaagtttagccta 36641141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 8645935 - 8645796
Alignment:
Q  38 aaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgca 137  Q
    |||| ||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||| |||||| |        ||||||||| ||||||||||    
T  8645935 aaaatcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacattgggggtcaattttgccattttttttaatagggggtcaaaatcgca 8645836  T
Q  138 acattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||||||| | ||||||||||||| ||||||||||||    
T  8645835 acattttgaaactaagagggcgaaaagtgaagtttagcct 8645796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 25557036 - 25557180
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |        ||||||||| |||||    
T  25557036 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaatagggggtcaaaa 25557134  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||| |||| ||||||||||   |||||||||||    
T  25557135 tcgcaacattttgaaacttagggggcgaaaagtagagtttagccta 25557180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 38408771 - 38408627
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | ||||||||||||||||  |||||||||||||||||||||||| |        |||||||||||||||    
T  38408771 ggtcaaaaaacatatttcccttatgttagtgg-tcaaaagagcatatttctctaaacatagggggtcacttttgccattttttttaatagggggccaaaa 38408673  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||| ||||||||| |||| || ||||||| | |||||||||||    
T  38408672 tcgcaatattttgaaacttaggggacgaaaagtggagtttagccta 38408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 40428800 - 40428947
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||||| |||||||| | ||||| |||||||| |        |||| |||| |||||    
T  40428800 ggtcaaaaagcatatttcccttatgttaggaggtcaaaagaacatatttccctaaacaca-ggggtgacttttgccatattttttaata-ggggtcaaaa 40428897  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  40428898 tcgcaacattttgaaacttagagggcgaaaagtgaagtttagccaaaaaa 40428947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 16901158 - 16901271
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |        ||||||||| |||||    
T  16901158 ggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca-tttttttaatagggggtcaaaa 16901255  T
Q  133 tcgcaacattttgaaa 148  Q
    ||||||||||||||||    
T  16901256 tcgcaacattttgaaa 16901271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 19169486 - 19169412
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||||||||||||||||||||||  || ||||| ||||||||||||||||||||||||| ||||||||||    
T  19169486 ggtcaaaaagcatatttcccttatgttaagaggtcaaatgagcatattttcctaaacataggggatcacttttgc 19169412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 10379424 - 10379349
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgcta 109  Q
    ||||||||| |||||||||||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||    
T  10379424 ggtcaaaaaacatatttcccttatgttagggg-tcaaaagagcatattttcctaaacataggaggtcacttttgcta 10379349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 34 - 178
Target Start/End: Original strand, 10293249 - 10293391
Alignment:
Q  34 gtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaat 133  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||| || ||||||||||||||| |||||| |        ||||| ||| ||||||    
T  10293249 gtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttcccaaaacatagggggtcatttttgcca--ttttttaatagcgggtcaaaat 10293346  T
Q  134 cgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    | ||||||||||||| |||| || ||||||| | | |||||||||    
T  10293347 cacaacattttgaaacttagtggacgaaaagtgcaatttagccta 10293391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 16307638 - 16307769
Alignment:
Q  34 gtcaaaaagcatatttcccttatgttagaagc-tcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||| ||||||| |||||||||||  |  |||||||||||||||| ||||||||||||||||||||||||| |        ||||||| || ||||    
T  16307638 gtcaaaaaacatattttccttatgttaggggggtcaaaagagcatatttccctaaacatagggggtcacttttgcaattttttttaatagggagctaaaa 16307737  T
Q  133 tcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||||||| ||| ||| |||||||||||    
T  16307738 tcgcaacattttaaaacttaaagggcgaaaag 16307769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 31055475 - 31055549
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||||||| ||||||||||||||||||   | |||||||||||||||| |||||||||||||||||||||||||    
T  31055475 ggtcaaaaaacatatttcccttatgttaaggggtcaaaagagcatatttccctaaacatagggggtcacttttgc 31055549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 17704748 - 17704887
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||| |||||||||||||||||   | ||||||||||||||||||||||||||   |||| ||||||||||        |||||||||||||||    
T  17704748 ggtcaaaaagtatatttcccttatgttatggg-tcaaaagagcatattttcctaaacat---gggttacttttgcta-tttttttaatagggggccaaaa 17704842  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||| ||||||||| |||| || ||||||| | ||||| ||||    
T  17704843 tcgcaatattttgaaacttaggggacgaaaagtgtagtttggcct 17704887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 31648165 - 31648055
Alignment:
Q  66 tcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagg 165  Q
    |||||| ||||||||| |||||||||| |||||||||||||| |        |||||||||| ||||||||||||||||||||||||  || |||||||     
T  31648165 tcaaaaaagcatatttccctaaacataaggggtcacttttgccattttttt-aatagggggcgaaaatcgcaacattttgaaatttatgggacgaaaagt 31648067  T
Q  166 gaagtttagcct 177  Q
    | ||||||||||    
T  31648066 ggagtttagcct 31648055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 174
Target Start/End: Complemental strand, 7835852 - 7835722
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| ||||||| ||||||||||   | |||||||||||||||| ||||||||||||  | |||||||||          |||||||| ||||||    
T  7835852 ggtcaaaaaacatattttccttatgttatggg-tcaaaagagcatatttccctaaacataggatgccacttttgc---------caatagggg-ccaaaa 7835764  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttag 174  Q
    || ||||||||| ||| ||||||||||||||| |||||||||    
T  7835763 tcacaacattttaaaacttagagggcgaaaagtgaagtttag 7835722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 173
Target Start/End: Original strand, 37961424 - 37961549
Alignment:
Q  47 tttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacattttga 146  Q
    |||||||||||||||  | |||||||||| ||||| ||||||||| |||| ||||||||||||        |||| || |||||||| ||||||||||||    
T  37961424 tttcccttatgttaggcggtcaaaagagcgtatttccctaaacatgggggatcacttttgctattttttttaata-ggagccaaaattgcaacattttga 37961522  T
Q  147 aatttagagggcgaaaagggaagttta 173  Q
    || |||| ||| |||||| | ||||||    
T  37961523 aacttagggggtgaaaagtgcagttta 37961549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 38476641 - 38476703
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcactttt 105  Q
    ||||||||||||||||||   | |||||||||||||||| |||||| ||||||||||||||||    
T  38476641 catatttcccttatgttatggggtcaaaagagcatatttccctaaatatagggggtcactttt 38476703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 20654040 - 20654105
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaat 183  Q
    |||||| |||||||||| ||||||||||||| |||| || ||||||| | ||||||||||||||||    
T  20654040 aataggaggccaaaatcacaacattttgaaacttaggggtcgaaaagtgcagtttagcctaaaaat 20654105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 2373277 - 2373215
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    ||||||||||||||||||   | |||||||||||||||||| ||||||||||||||||| ||||    
T  2373277 catatttcccttatgttatggg-tcaaaagagcatattttcttaaacatagggggtcacgtttg 2373215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 41663689 - 41663756
Alignment:
Q  37 aaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    ||||| ||||||||||||||||||   | |||||||||||||||| |||||||||  |||||||||||||    
T  41663689 aaaaatcatatttcccttatgttatggggtcaaaagagcatatttccctaaacat--ggggtcacttttg 41663756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 31055373 - 31055312
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||| |||||||| |||||  ||| |||||||||| | ||||||||||||    
T  31055373 aatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcctaa 31055312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 18695248 - 18695308
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||||||||||||||||| |||||||||  ||| |||||||||| | | |||||||||    
T  18695248 aatagggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagccta 18695308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 31648237 - 31648293
Alignment:
Q  125 ggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaa 181  Q
    ||||||||||||||||||||||||  ||| || ||||||| | ||||||||||||||    
T  31648237 ggccaaaatcgcaacattttgaaacataggggacgaaaagtgcagtttagcctaaaa 31648293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 7187332 - 7187260
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    ||||| ||| |||||||||||||||||||| | ||||||||  |||||| |||||||||  ||||||| ||||||    
T  7187332 ggtcataaaacatatttcccttatgttagagggtcaaaagaatatatttccctaaacat--ggggtcaattttgc 7187260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 16901055 - 16900996
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||||| |||||||||||||||||||||  |||  ||||||||| | ||||||||||    
T  16901055 aatagggggtcaaaatcgcaacattttgaaacataggaggcgaaaagtgcagtttagcct 16900996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 23765473 - 23765418
Alignment:
Q  123 ggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||||||| ||||||||||||||  ||| |||||||||| | |||||||||||    
T  23765473 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagccta 23765418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 23815321 - 23815266
Alignment:
Q  123 ggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||||||| ||||||||||||||  ||| |||||||||| | |||||||||||    
T  23815321 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagccta 23815266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 24025079 - 24025036
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaa 161  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||    
T  24025079 aatagggggccaaaatcgcaatattttgaaacttagggggcgaa 24025036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 35302074 - 35302223
Alignment:
Q  33 ggtcaaaaag--catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaa 130  Q
    ||||||||||  ||||||| | |||||||||  | |||||||||||||||| |||||| || ||||||||||||||| |        ||||| ||| |||    
T  35302074 ggtcaaaaagatcatatttacattatgttagggggtcaaaagagcatatttccctaaatat-gggggtcacttttgcca-tttttataatagagggtcaa 35302171  T
Q  131 aatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||||||||||||| |||  ||| |||||  | ||||||||| |||||    
T  35302172 aatcgcaacattttgaaacttaaggggagaaaaatgcagtttagccaaaaaa 35302223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 2373391 - 2373453
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaa 180  Q
    |||||| ||||||||||||||| |||||||| |||| ||  |||||| | |||||||||||||    
T  2373391 aataggaggccaaaatcgcaactttttgaaacttaggggttgaaaagtgcagtttagcctaaa 2373453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 34125192 - 34125130
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcactttt 105  Q
    ||||||| |||||||||||  | |||||||||||||||| |||||||||   |||||||||||    
T  34125192 catattttccttatgttaggggatcaaaagagcatatttccctaaacatgaagggtcactttt 34125130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 40428697 - 40428651
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaag 164  Q
    |||||||| ||||||||||||||||||||||  ||| ||||||||||    
T  40428697 aataggggaccaaaatcgcaacattttgaaacatagggggcgaaaag 40428651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 23040120 - 23040182
Alignment:
Q  43 catatttcccttatgttaga--agctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    |||||||||||||||||||   || |||||||||||||||| |||||||||   ||||||||||||    
T  23040120 catatttcccttatgttaggggaggtcaaaagagcatatttccctaaacat---gggtcacttttg 23040182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 31576551 - 31576487
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||  ||||||| |||||||||||||| |||| || ||||||| | ||||||||| |||||    
T  31576551 aatagggttccaaaattgcaacattttgaaacttaggggtcgaaaagtgcagtttagccaaaaaa 31576487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 38408873 - 38408937
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||||| |||||||||||||||| | |||  |||||| ||||||  | |||||||||||||||    
T  38408873 aataggggaccaaaatcgcaacattataaaacatagaggacgaaaaatgcagtttagcctaaaaa 38408937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 25125 - 25269
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||| | |        |||| ||||||||||    
T  25125 ggtcaaaaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttaccattttttttaataaggggccaaaa 25224  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    ||||||||||||  || ||||||| ||||||  ||||||||||||    
T  25225 tcgcaacattttagaacttagaggacgaaaaatgaagtttagcct 25269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 178
Target Start/End: Original strand, 2210 - 2353
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||| |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||||||||    
T  2210 ggtcaaaaagcatattgcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaatagggggccaaaa 2308  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    ||||||| |||| ||| ||||| ||||||||| | | |||||||||    
T  2309 tcgcaac-ttttaaaacttagaaggcgaaaagtggactttagccta 2353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 2106 - 2047
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcct 177  Q
    |||||||||||||||| |||||||||| |||  ||| |||||||||| | ||||||||||    
T  2106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 2047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 1935 - 2080
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    |||||||||||||||||||||||||||||  | |||||| ||||||||| ||||||||||||||||||||||||| |        || | |||  |||||    
T  1935 ggtcaaaaagcatatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggtcacttttgccattttttttaa-aagggatcaaaa 2033  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaa 179  Q
    |||||||||||||||| |||||||| |||||| |||||||| |||||    
T  2034 tcgcaacattttgaaacttagagggtgaaaagtgaagtttaacctaa 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 49802 - 49652
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| || |||||||||||||||||| ||| |        |||||||| ||||||    
T  49802 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgccattttttttaataggggtccaaaa 49703  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaat 183  Q
    |||||||||||| ||| |||  |||||||||| | | ||||||||||||||    
T  49702 tcgcaacattttaaaacttaaggggcgaaaagtggactttagcctaaaaat 49652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 62341 - 62191
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||| |||||||||||||||||||  | |||||||||||||||| || |||||||||||||||||| ||| |        |||||||| ||||||    
T  62341 ggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgccattttttttaataggggtccaaaa 62242  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaat 183  Q
    |||||||||||| ||| |||  |||||||||| | | ||||||||||||||    
T  62241 tcgcaacattttaaaacttaaggggcgaaaagtggactttagcctaaaaat 62191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 2134 - 1997
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaa 132  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||| |||||      |||||||||||||| |        ||||||||| |||||    
T  2134 ggtcaaaaagcatgtttcccttatgttaggaggtcaaaagagcatatttccctaa------ggggtcacttttgccattttttttaatagggggtcaaaa 2041  T
Q  133 tcgcaacattttgaaatttagagggcgaaaagggaagtttagcc 176  Q
    |||||||||||| ||| |||||||||||||||  ||||||||||    
T  2040 tcgcaacattttaaaacttagagggcgaaaagtaaagtttagcc 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 66317 - 66174
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggcc-aaa 131  Q
    |||||||||||||| |||||||||||||| || |||||| ||||||||| |||||||||| |||| || ||||  |         ||||||||||| |||    
T  66317 ggtcaaaaagcatagttcccttatgttaggaggtcaaaatagcatatttccctaaacata-ggggccatttttttt---------aatagggggccaaaa 66228  T
Q  132 atcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaataa 185  Q
    || |||||||||| ||| ||||||||||||||| |||||||||||||| |||||    
T  66227 attgcaacattttaaaacttagagggcgaaaagtgaagtttagcctaataataa 66174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 3729 - 3801
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||| |||||||||  ||||||||||||||    
T  3729 ggtcaaaaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacat--ggggtcacttttgc 3801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 178
Target Start/End: Complemental strand, 5413 - 5288
Alignment:
Q  52 cttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgctannnnnnnnaatagggggccaaaatcgcaacattttgaaattt 151  Q
    |||| ||||| || ||||||||||||||||| ||||||||| |||||||||||||| |        |||||||||||||||| ||||||||||||||  |    
T  5413 cttacgttaggaggtcaaaagagcatatttttctaaacataaggggtcacttttgcca-tttttttaatagggggccaaaattgcaacattttgaaacat 5315  T
Q  152 agagggcgaaaagggaagtttagccta 178  Q
    | ||||||| ||| | |||||||||||    
T  5314 aaagggcgagaagtgtagtttagccta 5288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 5975 - 5911
Alignment:
Q  33 ggtcaaaaagcatatttcccttatgtta-gaagctcaaaagagcatattttcctaaacatagggg 96  Q
    |||||||||||||||||||||||||||| |  | |||||| ||||||||| ||||||||||||||    
T  5975 ggtcaaaaagcatatttcccttatgttaggggggtcaaaatagcatatttccctaaacatagggg 5911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 917 - 991
Alignment:
Q  33 ggtcaaaa-agcatatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttgc 107  Q
    |||||||| ||||||||| |||||||||||||| |||||| ||||||| | |||||||||  ||||||||||||||    
T  917 ggtcaaaagagcatatttaccttatgttagaaggtcaaaatagcatatatccctaaacat-tggggtcacttttgc 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 814 - 754
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagccta 178  Q
    |||||||||||||||||||||||||| |||| |||  ||| |||||| | |||||||||||    
T  814 aatagggggccaaaatcgcaacatttcgaaacttaaggggtgaaaagtgcagtttagccta 754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 455061 - 455000
Alignment:
Q  45 tatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtcacttttg 106  Q
    ||||||| |||||||||  | | |||||||||||||| ||||||||| ||||||||||||||    
T  455061 tatttcctttatgttagggggttaaaagagcatatttccctaaacatggggggtcacttttg 455000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 455159 - 455102
Alignment:
Q  43 catatttcccttatgttagaagctcaaaagagcatattttcctaaacatagggggtca 100  Q
    |||||||||||||||||||  | | |||||| ||||||||||||||||| ||||||||    
T  455159 catatttcccttatgttagggggttaaaagaacatattttcctaaacatggggggtca 455102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 455274 - 455331
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagc 175  Q
    ||||||||||||||||||||||||||||||| |||| |  ||||||| | ||||||||    
T  455274 aatagggggccaaaatcgcaacattttgaaacttagggttcgaaaagtgcagtttagc 455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 436354 - 436418
Alignment:
Q  118 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagggaagtttagcctaaaaa 182  Q
    |||||| | |||||||| |||||||||||||||||| |||| ||||| | |||||  ||||||||    
T  436354 aataggtgaccaaaatcacaacattttgaaatttagggggcaaaaagtgcagttttacctaaaaa 436418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University