View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6871A_low_26 (Length: 386)

Name: NF6871A_low_26
Description: NF6871A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6871A_low_26
NF6871A_low_26
[»] scaffold0302 (2 HSPs)
scaffold0302 (16-381)||(7070-7435)
scaffold0302 (16-381)||(128-493)
[»] scaffold0225 (1 HSPs)
scaffold0225 (16-381)||(25311-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (16-381)||(14825-15190)
scaffold0162 (16-381)||(11198-11563)
[»] chr8 (32 HSPs)
chr8 (16-381)||(16875559-16875924)
chr8 (16-381)||(21848801-21849166)
chr8 (16-381)||(20650819-20651184)
chr8 (16-381)||(22436255-22436620)
chr8 (16-381)||(23155506-23155869)
chr8 (16-357)||(21195004-21195344)
chr8 (33-356)||(23902141-23902464)
chr8 (57-311)||(24631171-24631425)
chr8 (39-122)||(16414302-16414385)
chr8 (114-344)||(22422454-22422684)
chr8 (118-344)||(22988719-22988945)
chr8 (183-344)||(22131672-22131833)
chr8 (114-313)||(20394695-20394894)
chr8 (114-344)||(23652030-23652260)
chr8 (164-325)||(17672635-17672796)
chr8 (164-344)||(18858566-18858746)
chr8 (114-292)||(22376015-22376193)
chr8 (164-325)||(20016875-20017036)
chr8 (276-356)||(22317158-22317238)
chr8 (232-344)||(15535372-15535484)
chr8 (232-344)||(30311824-30311936)
chr8 (112-344)||(31569402-31569634)
chr8 (72-203)||(23887158-23887289)
chr8 (245-343)||(19482757-19482855)
chr8 (114-344)||(19979956-19980186)
chr8 (232-325)||(19114698-19114791)
chr8 (140-265)||(20390167-20390292)
chr8 (72-208)||(19869818-19869954)
chr8 (232-344)||(21920428-21920540)
chr8 (183-325)||(32602152-32602295)
chr8 (177-325)||(21323904-21324051)
chr8 (164-344)||(22041816-22041996)
[»] chr7 (44 HSPs)
chr7 (16-381)||(7825775-7826140)
chr7 (16-381)||(27105804-27106169)
chr7 (16-381)||(27172156-27172521)
chr7 (16-358)||(4441826-4442168)
chr7 (16-356)||(13457935-13458275)
chr7 (16-356)||(17925550-17925890)
chr7 (16-172)||(13378969-13379123)
chr7 (29-356)||(15716946-15717273)
chr7 (63-338)||(17143353-17143628)
chr7 (261-357)||(14938245-14938341)
chr7 (261-357)||(15365838-15365934)
chr7 (112-344)||(48813378-48813609)
chr7 (175-344)||(11770430-11770599)
chr7 (164-325)||(11235391-11235552)
chr7 (112-325)||(11386533-11386746)
chr7 (164-325)||(14334327-14334488)
chr7 (164-325)||(15159235-15159396)
chr7 (232-344)||(12689414-12689526)
chr7 (112-344)||(15626437-15626669)
chr7 (129-256)||(15122170-15122297)
chr7 (174-325)||(16948638-16948789)
chr7 (232-342)||(15596-15706)
chr7 (164-325)||(8709536-8709697)
chr7 (183-344)||(11551299-11551460)
chr7 (112-325)||(19614607-19614820)
chr7 (112-265)||(26092902-26093055)
chr7 (18-226)||(39178-39386)
chr7 (112-268)||(12204904-12205060)
chr7 (232-344)||(14956466-14956578)
chr7 (232-344)||(15147131-15147243)
chr7 (112-268)||(19149200-19149356)
chr7 (112-268)||(20748599-20748755)
chr7 (174-325)||(10872621-10872772)
chr7 (174-325)||(13023289-13023440)
chr7 (164-343)||(44789529-44789708)
chr7 (112-265)||(26116694-26116847)
chr7 (112-265)||(49154293-49154446)
chr7 (112-268)||(14139668-14139824)
chr7 (112-268)||(23503974-23504130)
chr7 (164-271)||(13688026-13688133)
chr7 (112-271)||(13966772-13966931)
chr7 (174-324)||(13675385-13675535)
chr7 (112-196)||(14262349-14262433)
chr7 (112-268)||(18052057-18052213)
[»] chr6 (39 HSPs)
chr6 (16-381)||(16380539-16380904)
chr6 (16-381)||(1646980-1647345)
chr6 (16-381)||(16648135-16648500)
chr6 (16-381)||(23997998-23998363)
chr6 (16-381)||(14130219-14130584)
chr6 (16-381)||(16099759-16100130)
chr6 (16-382)||(23025912-23026257)
chr6 (199-381)||(18836257-18836439)
chr6 (239-381)||(18577959-18578101)
chr6 (239-381)||(19985805-19985947)
chr6 (261-381)||(16234778-16234898)
chr6 (261-356)||(21928979-21929074)
chr6 (154-344)||(18965599-18965789)
chr6 (164-343)||(2873117-2873296)
chr6 (129-344)||(18406223-18406438)
chr6 (72-259)||(23085993-23086180)
chr6 (27-183)||(14643664-14643817)
chr6 (129-342)||(23080258-23080471)
chr6 (164-325)||(24294096-24294257)
chr6 (232-344)||(22828737-22828849)
chr6 (112-271)||(19881158-19881317)
chr6 (174-310)||(14378240-14378376)
chr6 (174-310)||(14379790-14379926)
chr6 (164-344)||(18196047-18196227)
chr6 (164-344)||(19866474-19866654)
chr6 (129-344)||(20634219-20634434)
chr6 (160-265)||(19487582-19487687)
chr6 (129-322)||(22760734-22760927)
chr6 (234-343)||(28261581-28261690)
chr6 (234-343)||(28284226-28284335)
chr6 (234-343)||(28340330-28340439)
chr6 (232-344)||(27564215-27564327)
chr6 (129-344)||(25608140-25608355)
chr6 (245-331)||(18796490-18796576)
chr6 (245-343)||(27189224-27189322)
chr6 (245-343)||(27259918-27260016)
chr6 (132-381)||(34643868-34644117)
chr6 (174-270)||(15461197-15461293)
chr6 (232-344)||(16926020-16926132)
[»] chr5 (31 HSPs)
chr5 (16-381)||(23507484-23507849)
chr5 (16-381)||(21935391-21935756)
chr5 (16-381)||(24583010-24583375)
chr5 (276-381)||(23505044-23505149)
chr5 (64-193)||(20250535-20250664)
chr5 (113-259)||(21409074-21409220)
chr5 (72-344)||(20466358-20466630)
chr5 (114-344)||(23473082-23473312)
chr5 (164-325)||(14998090-14998251)
chr5 (164-325)||(37289847-37290008)
chr5 (164-325)||(22136542-22136703)
chr5 (164-325)||(22331238-22331399)
chr5 (164-325)||(27612228-27612389)
chr5 (164-343)||(40710636-40710815)
chr5 (232-342)||(22349776-22349886)
chr5 (164-325)||(27520280-27520441)
chr5 (234-343)||(27666911-27667020)
chr5 (129-325)||(29474389-29474585)
chr5 (114-325)||(21337595-21337806)
chr5 (129-344)||(25428288-25428503)
chr5 (174-256)||(22463876-22463958)
chr5 (164-325)||(41772716-41772877)
chr5 (232-344)||(18780969-18781081)
chr5 (234-325)||(19771834-19771925)
chr5 (183-325)||(16358376-16358518)
chr5 (114-344)||(26737028-26737258)
chr5 (183-325)||(34568368-34568510)
chr5 (174-271)||(20344192-20344289)
chr5 (174-203)||(20777891-20777920)
chr5 (112-265)||(21562323-21562476)
chr5 (164-325)||(27683751-27683912)
[»] chr3 (47 HSPs)
chr3 (16-381)||(30139321-30139686)
chr3 (16-381)||(30148872-30149237)
chr3 (16-381)||(8272659-8273024)
chr3 (16-381)||(15611618-15611983)
chr3 (16-374)||(6151113-6151471)
chr3 (16-381)||(13965612-13965978)
chr3 (16-381)||(25767833-25768198)
chr3 (16-322)||(15948730-15949036)
chr3 (261-381)||(12795751-12795871)
chr3 (261-382)||(18915240-18915361)
chr3 (265-381)||(16258658-16258774)
chr3 (204-343)||(6710865-6711004)
chr3 (261-381)||(55514237-55514357)
chr3 (164-344)||(15340811-15340991)
chr3 (164-344)||(15400925-15401105)
chr3 (129-325)||(15723307-15723503)
chr3 (114-344)||(15261172-15261402)
chr3 (137-262)||(55498486-55498611)
chr3 (177-325)||(11950318-11950466)
chr3 (112-259)||(11889636-11889783)
chr3 (281-380)||(18751459-18751558)
chr3 (164-325)||(13254251-13254412)
chr3 (132-325)||(14874875-14875068)
chr3 (164-325)||(15346653-15346814)
chr3 (183-344)||(16693706-16693867)
chr3 (232-344)||(6602278-6602390)
chr3 (174-325)||(20060472-20060623)
chr3 (177-344)||(41179074-41179241)
chr3 (228-325)||(10007161-10007258)
chr3 (112-325)||(14088244-14088457)
chr3 (112-325)||(15014112-15014325)
chr3 (232-345)||(16805423-16805536)
chr3 (112-265)||(28755949-28756102)
chr3 (174-325)||(15587810-15587961)
chr3 (234-343)||(5423408-5423517)
chr3 (228-325)||(10907771-10907868)
chr3 (112-325)||(13970465-13970678)
chr3 (164-343)||(16755109-16755288)
chr3 (234-325)||(48427008-48427099)
chr3 (183-325)||(16637334-16637476)
chr3 (16-46)||(17200484-17200514)
chr3 (261-343)||(53383523-53383605)
chr3 (234-343)||(3687486-3687595)
chr3 (174-271)||(16328067-16328164)
chr3 (225-325)||(12179909-12180009)
chr3 (245-325)||(12359005-12359085)
chr3 (94-270)||(13318829-13319005)
[»] chr1 (26 HSPs)
chr1 (16-381)||(20829485-20829850)
chr1 (16-344)||(20926992-20927320)
chr1 (16-355)||(41215949-41216288)
chr1 (16-188)||(20527147-20527319)
chr1 (42-355)||(21200998-21201311)
chr1 (24-130)||(22133857-22133963)
chr1 (16-85)||(35930918-35930987)
chr1 (164-325)||(21838907-21839068)
chr1 (164-325)||(21832259-21832420)
chr1 (164-325)||(33389270-33389431)
chr1 (164-325)||(51331734-51331895)
chr1 (183-344)||(19108306-19108467)
chr1 (112-265)||(31538186-31538339)
chr1 (112-265)||(37679097-37679250)
chr1 (112-265)||(48424921-48425074)
chr1 (112-265)||(52987789-52987942)
chr1 (174-256)||(20855011-20855093)
chr1 (124-342)||(21862574-21862792)
chr1 (245-343)||(41351984-41352082)
chr1 (234-343)||(16348907-16349016)
chr1 (183-344)||(17043275-17043436)
chr1 (232-325)||(21026130-21026223)
chr1 (232-344)||(21234040-21234152)
chr1 (164-344)||(24792857-24793037)
chr1 (177-310)||(20834154-20834287)
chr1 (177-325)||(24097857-24098005)
[»] scaffold0076 (2 HSPs)
scaffold0076 (16-381)||(42175-42540)
scaffold0076 (112-325)||(31797-32010)
[»] scaffold0077 (1 HSPs)
scaffold0077 (16-381)||(26290-26655)
[»] chr2 (34 HSPs)
chr2 (16-381)||(24829749-24830114)
chr2 (11-381)||(22279622-22279992)
chr2 (16-381)||(24568229-24568594)
chr2 (16-381)||(22760130-22760495)
chr2 (16-355)||(25130152-25130491)
chr2 (64-340)||(10037941-10038217)
chr2 (64-340)||(10098326-10098602)
chr2 (261-381)||(12639039-12639159)
chr2 (112-325)||(30010841-30011054)
chr2 (112-265)||(23112369-23112522)
chr2 (112-325)||(30209574-30209787)
chr2 (129-325)||(27372842-27373038)
chr2 (114-344)||(24818889-24819119)
chr2 (112-265)||(1065384-1065537)
chr2 (183-344)||(21143769-21143930)
chr2 (164-325)||(24711607-24711768)
chr2 (164-325)||(41607094-41607255)
chr2 (232-344)||(24875527-24875639)
chr2 (112-271)||(23098675-23098834)
chr2 (174-325)||(24263943-24264094)
chr2 (164-325)||(10870423-10870584)
chr2 (164-325)||(27219589-27219750)
chr2 (112-344)||(27789294-27789526)
chr2 (183-325)||(23189492-23189633)
chr2 (177-270)||(27208894-27208987)
chr2 (232-325)||(44384347-44384440)
chr2 (112-268)||(12575983-12576139)
chr2 (183-343)||(16926915-16927075)
chr2 (183-343)||(17000555-17000715)
chr2 (234-325)||(22323635-22323726)
chr2 (174-325)||(23295508-23295659)
chr2 (183-325)||(9485789-9485931)
chr2 (112-325)||(23278349-23278562)
chr2 (232-344)||(24706259-24706371)
[»] scaffold0008 (3 HSPs)
scaffold0008 (16-381)||(132513-132878)
scaffold0008 (182-381)||(25743-25942)
scaffold0008 (16-127)||(25938-26049)
[»] chr4 (26 HSPs)
chr4 (16-381)||(15291179-15291544)
chr4 (42-382)||(12340912-12341252)
chr4 (261-382)||(14999200-14999321)
chr4 (261-375)||(9292727-9292841)
chr4 (72-345)||(14696035-14696308)
chr4 (69-311)||(8322850-8323092)
chr4 (164-325)||(14301888-14302049)
chr4 (123-265)||(8707913-8708055)
chr4 (112-268)||(15323216-15323372)
chr4 (129-325)||(40474982-40475178)
chr4 (164-325)||(8051532-8051693)
chr4 (164-325)||(23957689-23957850)
chr4 (114-313)||(14849225-14849424)
chr4 (112-265)||(3262911-3263064)
chr4 (164-325)||(27713278-27713439)
chr4 (112-265)||(44659983-44660136)
chr4 (232-344)||(14682490-14682602)
chr4 (112-344)||(51604909-51605141)
chr4 (232-343)||(8388336-8388447)
chr4 (129-344)||(15145759-15145974)
chr4 (72-226)||(18547696-18547850)
chr4 (112-268)||(15072358-15072514)
chr4 (234-325)||(12478542-12478633)
chr4 (232-319)||(18225423-18225510)
chr4 (234-325)||(19776772-19776863)
chr4 (112-268)||(15001482-15001638)
[»] scaffold0124 (2 HSPs)
scaffold0124 (16-381)||(5830-6197)
scaffold0124 (225-325)||(14173-14273)
[»] scaffold0266 (1 HSPs)
scaffold0266 (16-381)||(7885-8250)
[»] scaffold0170 (1 HSPs)
scaffold0170 (16-381)||(34002-34367)
[»] scaffold0120 (2 HSPs)
scaffold0120 (16-381)||(24093-24458)
scaffold0120 (129-344)||(7974-8189)
[»] scaffold0218 (2 HSPs)
scaffold0218 (16-382)||(1976-2342)
scaffold0218 (20-356)||(26270-26605)
[»] scaffold0610 (1 HSPs)
scaffold0610 (16-381)||(6953-7318)
[»] scaffold0876 (2 HSPs)
scaffold0876 (16-381)||(970-1335)
scaffold0876 (261-381)||(4451-4571)
[»] scaffold0022 (3 HSPs)
scaffold0022 (16-376)||(8850-9210)
scaffold0022 (219-342)||(40588-40711)
scaffold0022 (219-342)||(74308-74431)
[»] scaffold1488 (1 HSPs)
scaffold1488 (16-358)||(827-1168)
[»] scaffold0387 (1 HSPs)
scaffold0387 (16-358)||(15998-16340)
[»] scaffold0692 (1 HSPs)
scaffold0692 (16-381)||(1908-2264)
[»] scaffold0021 (3 HSPs)
scaffold0021 (16-381)||(31447-31811)
scaffold0021 (74-381)||(7131-7438)
scaffold0021 (16-311)||(21871-22165)
[»] scaffold0561 (1 HSPs)
scaffold0561 (16-352)||(7029-7361)
[»] scaffold0467 (1 HSPs)
scaffold0467 (16-259)||(1645-1888)
[»] scaffold0092 (1 HSPs)
scaffold0092 (27-302)||(103-378)
[»] scaffold0369 (1 HSPs)
scaffold0369 (16-154)||(6888-7026)
[»] scaffold0635 (1 HSPs)
scaffold0635 (64-340)||(8853-9129)
[»] scaffold0269 (1 HSPs)
scaffold0269 (239-381)||(2181-2323)
[»] scaffold0244 (1 HSPs)
scaffold0244 (239-381)||(25024-25166)
[»] scaffold0462 (1 HSPs)
scaffold0462 (16-120)||(2117-2221)
[»] scaffold1486 (1 HSPs)
scaffold1486 (260-381)||(91-212)
[»] scaffold0023 (3 HSPs)
scaffold0023 (260-381)||(54210-54331)
scaffold0023 (123-345)||(2636-2858)
scaffold0023 (129-271)||(151137-151279)
[»] scaffold0011 (2 HSPs)
scaffold0011 (281-382)||(181840-181941)
scaffold0011 (114-345)||(24655-24886)
[»] scaffold0310 (1 HSPs)
scaffold0310 (261-381)||(13093-13213)
[»] scaffold0335 (1 HSPs)
scaffold0335 (261-379)||(10979-11097)
[»] scaffold0647 (1 HSPs)
scaffold0647 (112-344)||(2853-3085)
[»] scaffold0293 (1 HSPs)
scaffold0293 (123-343)||(14423-14643)
[»] scaffold0083 (1 HSPs)
scaffold0083 (72-344)||(9114-9386)
[»] scaffold0080 (1 HSPs)
scaffold0080 (164-344)||(11411-11591)
[»] scaffold0001 (1 HSPs)
scaffold0001 (114-325)||(494991-495202)
[»] scaffold0719 (1 HSPs)
scaffold0719 (38-100)||(4785-4847)
[»] scaffold0102 (1 HSPs)
scaffold0102 (261-355)||(46682-46776)
[»] scaffold0074 (1 HSPs)
scaffold0074 (114-344)||(5066-5295)
[»] scaffold0058 (2 HSPs)
scaffold0058 (81-381)||(27337-27636)
scaffold0058 (150-239)||(76482-76571)
[»] scaffold0007 (1 HSPs)
scaffold0007 (129-335)||(84656-84862)
[»] scaffold0454 (1 HSPs)
scaffold0454 (164-325)||(8911-9072)
[»] scaffold0016 (1 HSPs)
scaffold0016 (112-265)||(176464-176617)
[»] scaffold0621 (1 HSPs)
scaffold0621 (129-344)||(3386-3601)
[»] scaffold0010 (2 HSPs)
scaffold0010 (118-325)||(3887-4094)
scaffold0010 (112-265)||(40453-40606)
[»] scaffold0004 (1 HSPs)
scaffold0004 (118-265)||(201594-201741)
[»] scaffold0509 (1 HSPs)
scaffold0509 (114-268)||(10858-11012)
[»] scaffold0138 (1 HSPs)
scaffold0138 (114-344)||(7209-7439)
[»] scaffold0040 (1 HSPs)
scaffold0040 (114-271)||(16904-17061)
[»] scaffold0445 (1 HSPs)
scaffold0445 (112-344)||(1969-2201)
[»] scaffold0379 (1 HSPs)
scaffold0379 (117-344)||(6014-6241)
[»] scaffold0028 (6 HSPs)
scaffold0028 (232-379)||(16855-17002)
scaffold0028 (311-377)||(104892-104958)
scaffold0028 (232-379)||(10393-10540)
scaffold0028 (112-325)||(48634-48847)
scaffold0028 (273-315)||(94051-94093)
scaffold0028 (183-343)||(45106-45266)
[»] scaffold1602 (1 HSPs)
scaffold1602 (114-344)||(189-419)
[»] scaffold0342 (1 HSPs)
scaffold0342 (114-344)||(15343-15573)
[»] scaffold0282 (1 HSPs)
scaffold0282 (114-344)||(14601-14831)
[»] scaffold0018 (3 HSPs)
scaffold0018 (114-344)||(10863-11093)
scaffold0018 (114-344)||(17055-17285)
scaffold0018 (236-325)||(24542-24631)
[»] scaffold0270 (2 HSPs)
scaffold0270 (114-271)||(5898-6055)
scaffold0270 (114-271)||(13028-13185)
[»] scaffold0037 (1 HSPs)
scaffold0037 (183-344)||(115172-115333)
[»] scaffold0029 (2 HSPs)
scaffold0029 (112-325)||(114532-114745)
scaffold0029 (222-344)||(108041-108163)
[»] scaffold0730 (1 HSPs)
scaffold0730 (112-344)||(121-353)
[»] scaffold0585 (1 HSPs)
scaffold0585 (112-268)||(5209-5365)
[»] scaffold0431 (1 HSPs)
scaffold0431 (232-344)||(9320-9432)
[»] scaffold0403 (1 HSPs)
scaffold0403 (129-268)||(8402-8541)
[»] scaffold0190 (1 HSPs)
scaffold0190 (174-325)||(31501-31652)
[»] scaffold0122 (1 HSPs)
scaffold0122 (129-344)||(38085-38300)
[»] scaffold0006 (1 HSPs)
scaffold0006 (72-271)||(103260-103459)
[»] scaffold0465 (1 HSPs)
scaffold0465 (16-74)||(13649-13707)
[»] scaffold0319 (1 HSPs)
scaffold0319 (114-344)||(720-950)
[»] scaffold0042 (2 HSPs)
scaffold0042 (116-342)||(22661-22887)
scaffold0042 (232-344)||(38060-38172)
[»] scaffold0017 (1 HSPs)
scaffold0017 (166-344)||(195661-195839)
[»] scaffold0206 (1 HSPs)
scaffold0206 (177-270)||(25141-25234)
[»] scaffold0148 (1 HSPs)
scaffold0148 (112-321)||(974-1183)
[»] scaffold0109 (2 HSPs)
scaffold0109 (183-344)||(40107-40268)
scaffold0109 (232-344)||(14365-14477)
[»] scaffold0104 (1 HSPs)
scaffold0104 (174-310)||(24202-24338)
[»] scaffold2004 (1 HSPs)
scaffold2004 (129-344)||(946-1161)
[»] scaffold0540 (1 HSPs)
scaffold0540 (129-271)||(6468-6610)
[»] scaffold0331 (1 HSPs)
scaffold0331 (72-313)||(16058-16298)
[»] scaffold0309 (1 HSPs)
scaffold0309 (114-271)||(16668-16825)
[»] scaffold0235 (2 HSPs)
scaffold0235 (217-310)||(9682-9775)
scaffold0235 (217-310)||(19896-19989)
[»] scaffold0228 (1 HSPs)
scaffold0228 (129-322)||(20214-20407)
[»] scaffold0089 (1 HSPs)
scaffold0089 (112-265)||(14833-14986)
[»] scaffold0575 (1 HSPs)
scaffold0575 (129-325)||(3554-3750)
[»] scaffold0126 (1 HSPs)
scaffold0126 (174-310)||(42905-43041)
[»] scaffold0044 (1 HSPs)
scaffold0044 (183-343)||(16113-16273)
[»] scaffold0084 (1 HSPs)
scaffold0084 (129-344)||(7175-7390)
[»] scaffold0072 (1 HSPs)
scaffold0072 (174-325)||(53018-53169)
[»] scaffold0035 (1 HSPs)
scaffold0035 (112-259)||(42227-42374)
[»] scaffold0012 (1 HSPs)
scaffold0012 (114-325)||(217542-217753)
[»] scaffold0501 (1 HSPs)
scaffold0501 (232-342)||(4150-4260)
[»] scaffold0149 (2 HSPs)
scaffold0149 (174-271)||(5532-5629)
scaffold0149 (174-271)||(9963-10060)
[»] scaffold0079 (1 HSPs)
scaffold0079 (232-313)||(35481-35562)
[»] scaffold0034 (1 HSPs)
scaffold0034 (225-310)||(3186-3271)
[»] scaffold0020 (1 HSPs)
scaffold0020 (112-325)||(99682-99895)
[»] scaffold0676 (1 HSPs)
scaffold0676 (217-313)||(7999-8095)
[»] scaffold0333 (1 HSPs)
scaffold0333 (232-344)||(17608-17720)
[»] scaffold0256 (1 HSPs)
scaffold0256 (232-344)||(23314-23426)
[»] scaffold0243 (1 HSPs)
scaffold0243 (129-325)||(25082-25278)
[»] scaffold0239 (1 HSPs)
scaffold0239 (180-344)||(10974-11138)
[»] scaffold0222 (1 HSPs)
scaffold0222 (245-325)||(9034-9114)
[»] scaffold0215 (1 HSPs)
scaffold0215 (232-344)||(28811-28923)
[»] scaffold0130 (1 HSPs)
scaffold0130 (232-344)||(44883-44995)
[»] scaffold0056 (1 HSPs)
scaffold0056 (232-344)||(3593-3705)


Alignment Details
Target: scaffold0302 (Bit Score: 294; Significance: 1e-165; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 7435 - 7070
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 7236  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  7235 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 7136  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||| ||||||||| ||||||||||| |  ||||||||||||||||||||    
T  7135 aagtgagtttccttggtcatttgatttctaagggtggtatttatgtggatccttctaaggttgatg 7070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 493 - 128
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  493 atcaccagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 394  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  393 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 294  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  293 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttttctaagtgtgagttttggttgaagg 194  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||| ||||||||| ||||||||||| |  ||||||||||||||||||||    
T  193 aagtgagtttccttggtcatttgatttctaagggtggtatttatgtggatccttctaaggttgatg 128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 25676 - 25311
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 25477  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  25476 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 25377  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  25376 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 25311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 282; Significance: 1e-158; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 15190 - 14825
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 14991  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  14990 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 14891  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  14890 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 14825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 11198 - 11563
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||||| |||||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 11397  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | |||| ||||||||||||||||||    
T  11398 tctgaggaagagcataatgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttatataagtgtgagttttggttgaagg 11497  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| |||||| |||||||||| |||||||||||||  ||||||||| ||||||||||    
T  11498 aagtgagtttccttggtcaagtgatttctaagggtggtatttctgtggatccttcaaaggttgatg 11563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 16875559 - 16875924
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16875758  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  16875759 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 16875858  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  16875859 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 16875924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 21848801 - 21849166
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| |||||| |||||||||||||||| | |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 21849000  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| | ||||||||||||||||    
T  21849001 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgggagttttggttgaagg 21849100  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||| | ||||||||||||||||| |||||||||||||  ||||||||| ||||| ||||    
T  21849101 aagtgagttttcttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggtggatg 21849166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 20650819 - 20651184
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||| |||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||| || || || ||||||||||||||| |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||     
T  20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgttttgtagtggtgttcatagatgatattttggtgtattcgaaa 20651018  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  20651019 tctgaggaggagcatgccgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagatttggttgaagg 20651118  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  |||||| ||||| |||||||    
T  20651119 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccgtctaaagttgatg 20651184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 22436620 - 22436255
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||| ||||||||||| |||||||||||||||||||||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||||||| ||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 22436421  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||| ||||| |||||||||||||||| ||||||| |||||| || ||||| || ||||||||||||||||||||| ||||||||||||||  ||    
T  22436420 tctgaggagaagcatgctgagcatttgaggatagtgttgcgagtcttaaaggagaatcagttatgtgctaagttgtctaagtgtgagttttggttgtggg 22436321  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| ||||||||||||   |||||| || ||||||||||    
T  22436320 aagtgagtttccttggtcatgtgatttctaagggtggtatttccgtggatccgtcgaaggttgatg 22436255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 23155506 - 23155869
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||||||||| ||||||||||||||| | | ||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaa 23155603  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||     
T  23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttattgatgatattttagtgtattcgaag 23155703  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||| |||  |||||||||||||||||||||| |||||||||| || || || ||||||||||||||||||||| ||||||||||||||||||    
T  23155704 tctgaggaggatcatgttgagcatttgaggattgtgttgtaagtcttgaaggataatcagttatgtgctaagttgtctaagtgtgagttttggttgaagg 23155803  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| | ||||||||||||||| || ||||||||||  |||||| || ||||||||||    
T  23155804 aagtgagtttccttagtcatgtgatttctaaggatggtatttctgcggatccgtcgaaggttgatg 23155869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 357
Target Start/End: Original strand, 21195004 - 21195344
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| | |||||| ||||||||||| |||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    || |||||||  ||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||     
T  21195104 tgtgccaggta-cttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtatttatagatgctattttggtgtattcgaaa 21195202  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||    
T  21195203 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtattgaaggagaaccagttatgtgctaagttgtctaagagtgagttttggttgcagg 21195302  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtattt 357  Q
    |||| ||||||| ||||||||||||||||  |||||||||||    
T  21195303 aagtaagtttccttggtcatgtgatttctcagggtggtattt 21195344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 33 - 356
Target Start/End: Complemental strand, 23902464 - 23902141
Alignment:
Q  33 aaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtcttta 132  Q
    |||| |||||||||||||||||||| ||||  ||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||| |    
T  23902464 aaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttca 23902365  T
Q  133 tggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattc 232  Q
    ||||||| |||||||||||||||||||||| | ||||||||||| |||| |||||||| ||||||||||||||||||||||| | ||||||||||||| |    
T  23902364 tggaatatatgaatagaatatttcatccttttctggaccgttttatggtagtgtttatcgatgatattttggtgtattcgaagtttgaggaggagcatgc 23902265  T
Q  233 tgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggt 332  Q
    |||||||||||||||| ||||||  |||||||| || ||  | || |||||||||| ||| ||| | ||| ||||||||   ||||||||||||| ||||    
T  23902264 tgagcatttgaggattatgttgcgtgtcttgaaggaaaattagttgtgtgctaagtggtcgaagtgcgagctttggttgcgagaagtgagtttccttggt 23902165  T
Q  333 catgtgatttctacgggtggtatt 356  Q
    ||||||||||||| ||||||||||    
T  23902164 catgtgatttctaagggtggtatt 23902141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 57 - 311
Target Start/End: Original strand, 24631171 - 24631425
Alignment:
Q  57 gtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttc 156  Q
    ||||||||||| |||||| | ||||||||||||||| | ||| ||||||| ||  |||||| || |||  | |||||||||||||||||||  ||||| |    
T  24631171 gtgttctgaactaggtatagtcactatgagtattctgtaatgtcatttggtgtgactaatgtgctaggattatttatggaatacatgaatatgatattcc 24631270  T
Q  157 atccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgca 256  Q
    ||  ||||| ||| |  | |||||| ||||| ||||| ||||| ||||||| |||||| || |||||||||||| | |||||| ||| ||| |||| |||    
T  24631271 attattattgggatcagtgtgtggttgtgttcatagacgatatcttggtgtcttcgaagtcggaggaggagcatgcagagcatctgatgatcgtgtcgca 24631370  T
Q  257 agtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
       |||||| |||||  |||| | ||| | ||||| |||| ||||||||||||||    
T  24631371 gaccttgaaggagaagaaattgtatgccatgttgtttaagtgtgagttttggttg 24631425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 16414385 - 16414302
Alignment:
Q  39 gaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgcca 122  Q
    |||||||||||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  16414385 gaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaatgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 344
Target Start/End: Original strand, 22422454 - 22422684
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || || || |||||||||||| | || || |    
T  22422454 aatgcgccaggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactcca 22422553  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    | || || || || |||  ||| ||||||| |||||| |||||||| |||||||||||  || | | |||||| || || ||| |||| || ||||||||    
T  22422554 agtccgaagaagaacatgttgaacatttgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaattatggttgaa 22422653  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || |||||||||| ||| ||||| ||||||    
T  22422654 agaggtgagtttccttggccatgttatttct 22422684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 344
Target Start/End: Complemental strand, 22988945 - 22988719
Alignment:
Q  118 cgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattc 217  Q
    ||||| |||| ||||||||||||||||||   || |||||| | | |||||| ||||| ||||| ||||| || |||||||||||| | ||||| ||  |    
T  22988945 cgccacgtgtgtttatggaatacatgaatcacatttttcatgcatttttggatcgtttcgtggttgtgttcatcgatgatattttgatatattccaagac 22988846  T
Q  218 tgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaa 317  Q
    ||| || || ||| |||||||||||| |||||| ||||||||  ||||||||||  |  | | |||||| ||||| ||| |||| || |||||||| ||     
T  22988845 tgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagag 22988746  T
Q  318 gtgagtttccatggtcatgtgatttct 344  Q
    |||||||| | ||| ||||| ||||||    
T  22988745 gtgagttttcttggccatgttatttct 22988719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 22131672 - 22131833
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||||||| |||||| |||||||| |||||||||||  || | | ||    
T  22131672 gtgtttatcgatgatattttgatctactccaagactgaagaagaacatgctgagcatttgaagattgtcttgcaagtgttgaaagagaagaaactttatg 22131771  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    |||| ||||||||| |||| || |||||||||||||| ||||| | ||| ||||| ||||||    
T  22131772 ctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttggccatgttatttct 22131833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 313
Target Start/End: Original strand, 20394695 - 20394894
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    ||||| || ||||| |||||||||||||||||| | || |||||| ||||||| || || ||||| || ||||| || || ||||||||| | || || |    
T  20394695 aatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttagatcgctttgttgttgtgttcattgacgatattttgatatactcta 20394794  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    | ||||| || || ||| | |||||||||| |||||| ||||||||  ||||||||||  | |||| ||| |||||||| ||| |||| || ||||||||    
T  20394795 agtctgaagaagaacatgccgagcatttgaagattgttttgcaagtgctgaaagagaaaaagttatatgccaagttgtcaaagtgtgaattctggttgaa 20394894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 344
Target Start/End: Complemental strand, 23652260 - 23652030
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    ||||| || ||||| |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || || || ||||||| |||| | || || |    
T  23652260 aatgcacctggtgtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgttttcattgatgatactttgatttactcca 23652161  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  |||| ||||| ||| |||||||||||| |||||| || ||||| |||||||||||  |  ||| |||||| ||||||||| |||| |||||||||||    
T  23652160 agactgaagaggaacatgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctatatgctaaattgtctaagtgtgaattttggttgaa 23652061  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || || ||||| | ||| ||||| ||||||    
T  23652060 agaggtaagttttcttggccatgtcatttct 23652030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 17672635 - 17672796
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  17672635 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 17672734  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  17672735 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 17672796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 344
Target Start/End: Complemental strand, 18858746 - 18858566
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || || |||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  18858746 tttggatcggtttgtggttgtgtttatcgacgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 18858647  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||| | ||| ||||| ||||||    
T  18858646 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 18858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 292
Target Start/End: Original strand, 22376015 - 22376193
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    ||||| |||||||| |||||||| ||||||||| | || |||||| | | |||||| ||||||||||| ||||| || || ||||||||  | || || |    
T  22376015 aatgcaccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgttttgtggttgtgttcatcgacgatatttttatatactcca 22376114  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtc 292  Q
    |  |||| || || ||| |||||||||||| |||||| ||||||||  ||||||||||  | |||| |||||| |||||    
T  22376115 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaaattgtc 22376193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 20016875 - 20017036
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  20016875 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 20016974  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  20016975 aaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 20017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 356
Target Start/End: Complemental strand, 22317238 - 22317158
Alignment:
Q  276 ttatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatt 356  Q
    ||||||||||||||||| ||| ||||||||||||||  | ||||  |||||| |||| |||||||||||| ||||||||||    
T  22317238 ttatgtgctaagttgtcgaagtgtgagttttggttgcggaaagttggtttccttggtaatgtgatttctaagggtggtatt 22317158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 15535484 - 15535372
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||| ||||| | |||    
T  15535484 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttgg 15535385  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  15535384 ccatgttatttct 15535372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 30311824 - 30311936
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||| ||||| | |||    
T  30311824 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttgg 30311923  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  30311924 ccatgttatttct 30311936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 112 - 344
Target Start/End: Original strand, 31569402 - 31569634
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||||||| || | |||||    
T  31569402 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 31569501  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    |||  |||| || |||||| | || ||| |||| |||||| ||||||| |||||||||||  | || | ||| || ||||| ||  ||||||||||| |     
T  31569502 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 31569601  T
Q  312 aaggaagtgagtttccatggtcatgtgatttct 344  Q
    |  ||||||||||||| ||||||| | ||||||    
T  31569602 agtgaagtgagtttccttggtcatattatttct 31569634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 23887289 - 23887158
Alignment:
Q  72 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 171  Q
    |||||||| || ||||||||  ||||||| || || ||  |||||||||||| ||| |||||||| |||||||||   || |||||| ||||||| || |    
T  23887289 tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaatcatatttttcatgcttatttagatc 23887190  T
Q  172 gttttgtggtggtgtttatagatgatattttg 203  Q
    | || ||||| ||||| || ||||||||||||    
T  23887189 gcttcgtggttgtgttcatcgatgatattttg 23887158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 343
Target Start/End: Original strand, 19482757 - 19482855
Alignment:
Q  245 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||| | ||||||||| |||||    
T  19482757 gattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggtcatgttatttc 19482855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 344
Target Start/End: Complemental strand, 19980186 - 19979956
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||| || || |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| || ||||||||| | || || |    
T  19980186 aatgcgcctggagtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgacgatattttgatttactcca 19980087  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  |||| || || ||| ||||| || ||| |||||| |||||||| |||||||||||  |||| | |||||| || ||||||  ||| || ||||||||    
T  19980086 agactgaagaagaacatgctgagaatctgaagattgtcttgcaagtgttgaaagagaagaaattttatgctaaattatctaagtatgatttctggttgaa 19979987  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || || ||||| | ||| ||||| ||||||    
T  19979986 agaggtaagttttcttggccatgttatttct 19979956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 19114791 - 19114698
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  19114791 ctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 19114698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 20390292 - 20390167
Alignment:
Q  140 catgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcat 239  Q
    |||||||||||| || ||| |||  ||||| || |||||||| |||||||| ||||| || ||| | ||||| ||  |||| || |||||| | ||||||    
T  20390292 catgaatagaattttccatgctttcttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagactgaagaagagcatgcggagcat 20390193  T
Q  240 ttgaggattgtgttgcaagtcttgaa 265  Q
    || | ||||||||||||||| |||||    
T  20390192 ttaaagattgtgttgcaagtgttgaa 20390167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 208
Target Start/End: Complemental strand, 19869954 - 19869818
Alignment:
Q  72 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 171  Q
    ||||| || |||||||||||  ||||||| |||||||| || || |||||||| || |||||||| || ||||| ||||| || ||||| ||||| || |    
T  19869954 tatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaacagaattttccatccgtatttagatc 19869855  T
Q  172 gttttgtggtggtgtttatagatgatattttggtgta 208  Q
      || || || || || || |||||||||||||||||    
T  19869854 agttcgttgtagtattcattgatgatattttggtgta 19869818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 21920428 - 21920540
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| |||||||| || | |||    
T  21920428 ctgagcatttgaagttagttttgcaagtgttgaaagagaagaaactttatgcgaaattgtctaagtgtgagttctggttgaaagaagtgagctttcttgg 21920527  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  21920528 acatgttatttct 21920540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 325
Target Start/End: Complemental strand, 32602295 - 32602152
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  32602295 gtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 32602196  T
Q  283 ctaagttgtctaagcgtgagtt-ttggttgaaggaagtgagttt 325  Q
    |||| ||||| ||| |||| || ||||||||| ||||| |||||    
T  32602195 ctaaattgtcaaagtgtgaattcttggttgaaagaagtaagttt 32602152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 325
Target Start/End: Original strand, 21323904 - 21324051
Alignment:
Q  177 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaat 276  Q
    ||||| |||||||| ||||| ||| || | ||||| ||  |||| || |||||| | || ||| ||| ||||||||||||| | |||||||||||  | |    
T  21323904 gtggttgtgtttatcgatgacattctgatctattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaattttgaaagagaa-aagt 21324002  T
Q  277 tatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    | | |||||||||||| ||| ||||||| ||||| |  |||||||||||    
T  21324003 tgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 21324051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 344
Target Start/End: Complemental strand, 22041996 - 22041816
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || || ||||| |||||||| || ||||||||| |||| || ||  |||| || || ||| |||||||| ||| |||||| |||||||  |||    
T  22041996 tttggatcggttcgtggttgtgtttatcgacgatattttgatgtactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagcgttg 22041897  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    ||||||||  || | | |||||| || |||||| | || || |||||||| ||| | ||||| | ||| ||||| ||||||    
T  22041896 aaagagaagaaactttatgctaaattatctaagtgagaattctggttgaaagaaataagttttcttggccatgttatttct 22041816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 7826140 - 7825775
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 7825941  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  7825940 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 7825841  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  7825840 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 7825775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 27105804 - 27106169
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 27106003  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  27106004 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 27106103  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  27106104 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 27106169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 27172521 - 27172156
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 27172322  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  27172321 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 27172222  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  27172221 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 27172156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 16 - 358
Target Start/End: Complemental strand, 4442168 - 4441826
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |  ||||||||| |||||| ||||||||| |||||||||| |||||||| ||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||| |||||||| ||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||     
T  4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 4441969  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||| ||||||||||   |||||||||||||| ||||||| ||||||||| || || |  ||||||||||||||||| ||| ||||||||||||||  ||    
T  4441968 tctggggaggagcatgtcgagcatttgaggatggtgttgcgagtcttgaaggaaaatcggttatgtgctaagttgtcgaagtgtgagttttggttgcggg 4441869  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttc 358  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  4441868 aagtgagtttccttggtcatgtgatttctaagggtggtatttc 4441826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 16 - 356
Target Start/End: Complemental strand, 13458275 - 13457935
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||||||| | ||||| ||||||||||||| ||    
T  13458275 atcattagattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaa 13458176  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||| |||||||| |||||||||| ||| ||||||| |  ||| |||||||||||||||||||| ||||||||||||||||||||||      
T  13458175 tgcgccaggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtggtggtgtttatcgatgatattttggtgtattcgagg 13458076  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    || ||||||||| || ||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||||||||| ||||||||||||||  ||    
T  13458075 tcagaggaggagtatgctgagcatttgaggattgtgttgcgtgtcttgaaagagaatcatttatgtgctaagttgtctaagtgtgagttttggttgcggg 13457976  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatt 356  Q
    |||||||||||| || |||||||||||| | || |||||||    
T  13457975 aagtgagtttccttgatcatgtgatttcgaaggatggtatt 13457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 356
Target Start/End: Complemental strand, 17925890 - 17925550
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||  ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||||||| ||||| ||     
T  17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtggtggtgtttatagattatattttggtatattcaaag 17925691  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||  ||||||||||  || |||||| || ||||||||||  |||||||| ||||| || ||||||||||||||||||||| |||| |||||||||   |    
T  17925690 tctagggaggagcatgttgtgcatttaagaattgtgttgcgcgtcttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttggttgcgtg 17925591  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatt 356  Q
    |||||||||||| ||||||||||||||| | ||||||||||    
T  17925590 aagtgagtttccttggtcatgtgatttcgaagggtggtatt 17925550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 13379123 - 13378969
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||||||||| ||||||||||||||||||| ||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa 13379026  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccg 172  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||    
T  13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 29 - 356
Target Start/End: Original strand, 15716946 - 15717273
Alignment:
Q  29 agtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtc 128  Q
    |||||||||||| |||||||||||||| | |||| |||| || ||||| |||||||| |||||| | |||||||||||  || |||||| |||  |||||    
T  15716946 agtgaaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtc 15717045  T
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    || |||||||| |||||||||||||| ||||||| | ||||||  ||| |||| ||||||||||| ||||| ||||| ||||| |  || ||||||||||    
T  15717046 ttcatggaatatatgaatagaatattccatccttttctggaccagtttttggtagtgtttatagacgatatcttggtttattcaatgtcggaggaggagc 15717145  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || |||| ||||| ||||  ||||||||   |||||| |||||  | || | |||||| ||||| ||| |||||||||| ||| ||||||||||||| |     
T  15717146 atgctgaacattttaggaccgtgttgcagaccttgaaggagaagaagttgtttgctaatttgtcgaagtgtgagttttgattgcaggaagtgagttttct 15717245  T
Q  329 tggtcatgtgatttctacgggtggtatt 356  Q
    ||||||||||||||| | ||| ||||||    
T  15717246 tggtcatgtgatttcaaagggcggtatt 15717273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 63 - 338
Target Start/End: Original strand, 17143353 - 17143628
Alignment:
Q  63 tgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctt 162  Q
    ||||||||||||||||||||||| ||||||  |||| ||||||| ||  ||||| |||| |||||||| |||||||| ||||||||||| || |||||||    
T  17143353 tgaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctt 17143452  T
Q  163 atttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtctt 262  Q
    ||||||| |  |||||||||||||||||||| ||||| |||||||||||||| || |||||||| ||| | |||||| |||||||||||||||     ||    
T  17143453 atttggatcagtttgtggtggtgtttatagacgatatcttggtgtattcgaagtcagaggaggatcatgcggagcatatgaggattgtgttgcgtacgtt 17143552  T
Q  263 gaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtg 338  Q
    ||| |||||  | || | || ||||||||| ||| ||||||||||||||   |||| |||||||| ||||||||||    
T  17143553 gaaggagaagaagttgtttgataagttgtcgaagtgtgagttttggttgcgtgaagggagtttccttggtcatgtg 17143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 14938341 - 14938245
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtattt 357  Q
    |||||||| || || || |||||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||||||  ||||||||||    
T  14938341 ttgaaagacaatcagttgtgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttggtcatgtgatttctaaaggtggtattt 14938245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 15365934 - 15365838
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtattt 357  Q
    |||||||| || || || |||||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||||||  ||||||||||    
T  15365934 ttgaaagacaatcagttgtgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttggtcatgtgatttctaaaggtggtattt 15365838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 344
Target Start/End: Original strand, 48813378 - 48813609
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    ||||||||||| |||| |||||||| ||||||||| | || |||||| ||||||| || || || ||||| ||||| || |||||||||||| | || ||    
T  48813378 ctaatgcgccaagtgtgtttatggagtacatgaattgtatttttcatgcttatttagatcgcttcgtggttgtgttcattgatgatattttgatatactc 48813477  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     || ||||| || || ||| |||||||||||| |||||||||||||||  |||| |||||  | |||| ||| || ||||| ||| |||| || ||||||    
T  48813478 taagtctgaagaagaacatgctgagcatttgaagattgtgttgcaagtgctgaaggagaagaagttatatgccaa-ttgtcaaagtgtgaattctggttg 48813576  T
Q  312 aaggaagtgagtttccatggtcatgtgatttct 344  Q
    || || |||||||| | ||| ||||| ||||||    
T  48813577 aatgaggtgagttttcttggccatgttatttct 48813609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 344
Target Start/End: Original strand, 11770430 - 11770599
Alignment:
Q  175 ttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacca 274  Q
    ||||||| ||||| || |||||||||||| | || || || |||||||  || ||| |||||||||||| |||||| |||||||| |||||||||||  |    
T  11770430 ttgtggttgtgttcatcgatgatattttgatatactccaagtctgagggagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaa 11770529  T
Q  275 attatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
     |||| || ||| ||||||||| |||| || |||||||| || || ||||| | ||| ||||| ||||||    
T  11770530 gttatatgttaaattgtctaagtgtgaattctggttgaaagaggtaagttttcttggccatgttatttct 11770599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 11235391 - 11235552
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  11235391 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 11235490  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  11235491 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 11235552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 11386533 - 11386746
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||||||||| |||||||| || | ||| ||||| |||||| ||| | ||||  | || |||||||||||||| |||||||||||  | |||||    
T  11386533 ctaatgcgccaggtgtatttatggagtataagaacagaatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 11386632  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     ||  |||| || |||||| | |||||| |||||||||| || || ||  ||||||||||  | || | |||||||||||| ||  |||| || |||||     
T  11386633 taagactgaagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggtta 11386732  T
Q  312 aaggaagtgagttt 325  Q
    |  |||||||||||    
T  11386733 agtgaagtgagttt 11386746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 14334488 - 14334327
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  14334488 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 14334389  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  14334388 aaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 14334327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 15159235 - 15159396
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  15159235 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttg 15159334  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  15159335 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 15159396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 12689526 - 12689414
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | |||    
T  12689526 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttgg 12689427  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  12689426 ccatgttatttct 12689414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 344
Target Start/End: Complemental strand, 15626669 - 15626437
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    ||||||| |||||||| |||||||| ||||||||  | || |||||| ||||||| || || || ||||| | ||| || |||||||||||  | || |     
T  15626669 ctaatgcaccaggtgtatttatggagtacatgaaccgtatttttcatgcttatttagatcgcttcgtggttgcgttcatcgatgatattttaatatacta 15626570  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     || ||||| || || |||   ||| |||||| |||||| ||||||||  ||||||||||  | |||| |||||||||||| ||| |||| || ||||||    
T  15626569 taagtctgaagaagaacatgtcgagtatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttg 15626470  T
Q  312 aaggaagtgagtttccatggtcatgtgatttct 344  Q
    || || |||||||||| ||| ||| | ||||||    
T  15626469 aatgaggtgagtttccttggccatattatttct 15626437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 15122170 - 15122297
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||||||||||||||| || |||| || |||||||||    |||||||| ||||| ||| | ||||| ||||||||||| || |  ||||||||||    
T  15122170 tttatggaatacatgaataggatttttcgtctttatttggattagtttgtggtcgtgttcatataagatatcttggtgtattcaaagttggaggaggagc 15122269  T
Q  229 attctgagcatttgaggattgtgttgca 256  Q
     | | |||||| |||| |||||||||||    
T  15122270 ttgcggagcatatgagaattgtgttgca 15122297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 325
Target Start/End: Original strand, 16948638 - 16948789
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| |||||||| ||||||||| || | ||||| ||    || ||||||||  | |||||| ||| |||||||||||||||||||||||| ||      
T  16948638 tttgtggttgtgtttattgatgatattctgatttattctaaaatcgaagaggagcacgcagagcatctgaagattgtgttgcaagtcttgaaagaaaaga 16948737  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    | || | ||||||| |||| ||| ||||||||||||| |  |||||||||||    
T  16948738 agttgtatgctaagctgtcaaagtgtgagttttggttaagtgaagtgagttt 16948789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 342
Target Start/End: Original strand, 15596 - 15706
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||||||||| ||||| | |||    
T  15596 ctgagcatctgatgattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttgg 15695  T
Q  332 tcatgtgattt 342  Q
     ||||| ||||    
T  15696 ccatgttattt 15706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 8709697 - 8709536
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || ||| |||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  8709697 tttggatcggtttatggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 8709598  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  8709597 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 8709536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 11551299 - 11551460
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    ||||| || |||||||||||| | ||||| ||  |||| || || |||  ||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  11551299 gtgttcatcgatgatattttgatttattccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 11551398  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    | || ||||||||| |||| || |||||||| ||||||||||| | ||| ||||| ||||||    
T  11551399 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 11551460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 19614820 - 19614607
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  19614820 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 19614721  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    ||   ||||||| |||||| | || ||| |||||||||| |||||||| |||||||||||  | || | ||| || ||||| ||| | |||||||||||     
T  19614720 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 19614621  T
Q  312 aaggaagtgagttt 325  Q
    |  |||||||||||    
T  19614620 agtgaagtgagttt 19614607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 26092902 - 26093055
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  26092902 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 26093001  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  26093002 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 26093055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 39178 - 39386
Alignment:
Q  18 catcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatg 117  Q
    ||||||||  |||||||| ||||||||||||  || || |  ||| ||||  | ||||| || |||||||||||  ||||||| |||||||| || || |    
T  39178 catcagatacgagtgaagtcggaagatatattgaagactgccttcagaacccgttatggtcattatgagtattcggtgatgccttttggagtgtccaacg 39277  T
Q  118 cgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattc 217  Q
    ||||||| || |||||||| || ||||| ||||| || ||||| ||||| || |  || || || || || || ||||||||||||||||| || || ||    
T  39278 cgccaggagtttttatggagtatatgaacagaattttccatccatatttagatcagttcgttgtagtattcattgatgatattttggtgtactctaaatc 39377  T
Q  218 tgaggagga 226  Q
     ||||||||    
T  39378 agaggagga 39386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 112 - 268
Target Start/End: Original strand, 12204904 - 12205060
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||| ||||    | |||||| |||||||| |||||||| ||  | ||||     
T  12204904 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatctgtggtcgtgtttattgatgatatcttaatttattt 12205003  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
     ||  |||| || |||||| | |||||| |||  |||||||||||||| ||||||||    
T  12205004 taagactgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaaga 12205060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 14956578 - 14956466
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| ||||||||||| | |||    
T  14956578 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttgg 14956479  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  14956478 ccatgttatttct 14956466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 15147131 - 15147243
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||||||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| || || ||||| | |||    
T  15147131 ctgagcatttgaagattgttttgcaagtgttgaaagagaagaaactttatgcaaaattgtctaagtgtgagttctggttgaaagaggtaagttttcttgg 15147230  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  15147231 ccatgttatttct 15147243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 112 - 268
Target Start/End: Complemental strand, 19149356 - 19149200
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| || |||||| |||| || ||| ||||| ||||    |||||||| |||||||| ||||| || ||  | |||||    
T  19149356 ctaatgcgcctggtgtgtttatggagtatatgaattgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 19149257  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
     ||  |||| || |||||| | |||||| ||| ||||||||||||||| ||||||||    
T  19149256 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaga 19149200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 112 - 268
Target Start/End: Complemental strand, 20748755 - 20748599
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||| ||||    |||||||| |||||||| ||||| || ||  | |||||    
T  20748755 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 20748656  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
     ||  |||| || |||||| | |||||| ||| ||||||||||||||| ||||||||    
T  20748655 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaga 20748599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 325
Target Start/End: Complemental strand, 10872772 - 10872621
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||      
T  10872772 tttgtggtcgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 10872673  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    || | | | |||| ||||||||| |||| || |||||||| |||||||||||    
T  10872672 aactttatcctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10872621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 325
Target Start/End: Complemental strand, 13023440 - 13023289
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    ||||||||||||||||| ||||||| |||| | ||||| ||  |||| ||||||||| | || ||| |||| ||||| |||||||| |||||||| ||      
T  13023440 tttgtggtggtgtttattgatgataatttgatttattctaagactgaagaggagcatgcagaacatctgagaattgtattgcaagttttgaaagaaaaga 13023341  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    | || | ||| |||||||| ||  ||||||| ||||| |  |||||||||||    
T  13023340 agttgtatgccaagttgtcaaaatgtgagttgtggttaagtgaagtgagttt 13023289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 343
Target Start/End: Original strand, 44789529 - 44789708
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || ||||||||  ||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||    
T  44789529 tttggatcggtttgtggttatgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 44789628  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| || |||||||||| ||| ||||| |||||    
T  44789629 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 44789708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 26116694 - 26116847
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| |||||||| ||||||||| |||| || ||| ||| | ||||    ||| | ||||||||||| || ||||||||  | |||||    
T  26116694 ctaacgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttcttgtggtgtttattgacgatattttaatctattc 26116793  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| |||||||||||||| |||||    
T  26116794 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaa 26116847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 265
Target Start/End: Complemental strand, 49154446 - 49154293
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||  ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  49154446 ctaatgcgcctggtgtttttatggggtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 49154347  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  49154346 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 49154293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 268
Target Start/End: Complemental strand, 14139824 - 14139668
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| |||||||||||| | |||||    
T  14139824 ctaacgcgcctggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattttgatttattc 14139725  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
     ||  |||| || |||||| | || ||| |||| |||||||||||||| ||||||||    
T  14139724 taagactgaagaagagcatgcagaacatctgagaattgtgttgcaagtattgaaaga 14139668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 268
Target Start/End: Original strand, 23503974 - 23504130
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||||||| || | |||||    
T  23503974 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 23504073  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
    |||  |||| || |||||| | || ||| |||| |||||||||||||| ||||||||    
T  23504074 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 23504130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 13688133 - 13688026
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  13688133 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttg 13688034  T
Q  264 aaagagaa 271  Q
    ||||||||    
T  13688033 aaagagaa 13688026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 112 - 271
Target Start/End: Original strand, 13966772 - 13966931
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||| ||  | |||||    
T  13966772 ctaacgcgcctggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 13966871  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
     ||   ||| ||||||||| | |||||| |||| ||||| |||||||| |||||||||||    
T  13966872 caagaatgaagaggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaa 13966931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 13675535 - 13675385
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| || ||||| ||||| ||| || | ||||| ||  |||| || |||||| | |||||| ||| |||||| |||||||| ||||| |||||      
T  13675535 tttgtggttgtatttattgatgacattctgatttattcaaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtattgaatgagaaaa 13675436  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtt 324  Q
    | || | |||||||||||| ||| ||||||| ||||| |  ||||||||||    
T  13675435 agttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagtt 13675385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 14262349 - 14262433
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatga 196  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||| ||||    |||||||| |||||||| |||||    
T  14262349 ctaatgcgcctggtgtgtttatggagtatatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatga 14262433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 268
Target Start/End: Original strand, 18052057 - 18052213
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||| ||| || | |||||    
T  18052057 ctaacgcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 18052156  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
    |||  |||| || |||||| | || ||| |||| |||||||||||||| ||||||||    
T  18052157 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 18052213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 16380539 - 16380904
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16380738  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  16380739 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 16380838  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  16380839 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 16380904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 1646980 - 1647345
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||     
T  1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgacattttggtgtattcgaag 1647179  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    | |||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||  || ||||| |||||||||||| ||||||||||||||||||    
T  1647180 tttgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagataaccggttgtgtgccaagttgtctaagtgtgagttttggttgaagg 1647279  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  1647280 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 1647345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 16648135 - 16648500
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16648334  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || || || |||||||||||| ||||||||||||||||||    
T  16648335 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 16648434  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||| ||||| ||||||||||    
T  16648435 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggacccttccaaggttgatg 16648500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 23998363 - 23997998
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||     
T  23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattgaaag 23998164  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    || ||||| |||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||||||||||||| |||    
T  23998163 tccgaggaagagcatgctgaacatttgaggattgtgttgtaagtcttgaaagagaaccagttatgtgccaagttgtctaagtgtgagttttggttggagg 23998064  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||   |||||||| ||||||||||    
T  23998063 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtagatccttccaaggttgatg 23997998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 14130584 - 14130219
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||| | ||||| |||||||| |||| ||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    || || ||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtggtggtgtttagagatgatattttggtgtattcgaag 14130385  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    | ||||||||||||| |||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||   |    
T  14130384 tttgaggaggagcatgctgagcatttgaggattgtgttacgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgtgag 14130285  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| |||||||||||||||||  ||||||||||||  |||||| |  ||||||||||    
T  14130284 aagtgagtttccttggtcatgtgatttctaaaggtggtatttctgtggatccgttgaaggttgatg 14130219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 16100130 - 16099759
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||| |||||||||||||||||||||||||||   |||  ||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
Q  116 tgcgccaggtgtctttat------ggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtat 209  Q
    || |||||||||||||||      ||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtggtggtgtttatagatgataatttggtgtat 16099931  T
Q  210 tcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggt 309  Q
    ||||| ||| ||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  16099930 tcgaagtctaaggaggagcacgctgagcatttaaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggt 16099831  T
Q  310 tgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    || ||||||||| ||||| ||||||||||||||||| ||||||||||| |  ||||||||| ||||||||||    
T  16099830 tgcaggaagtgaatttccttggtcatgtgatttctaagggtggtatttatgtggatccttcgaaggttgatg 16099759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 16 - 382
Target Start/End: Original strand, 23025912 - 23026257
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||   ||   ||||||||||||||||||||||||||||| |||||||||||||||||| |      
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatat-- 23026009  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
                       ||||| |||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||| |||     
T  23026010 -------------------gaatatatgaatagaatatttcatccttttatgaaccgttttgtggtggtgtttatagatgatattttggtgtatttgaag 23026090  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| ||  |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||  ||    
T  23026091 tctgaggaggagcatgcttcgcatttgaggattgtgttgcgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcggg 23026190  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatgt 382  Q
    |||||||||||| ||||||||||||||||| ||||||||||||   |||||| || |||||||||||    
T  23026191 aagtgagtttccttggtcatgtgatttctaagggtggtatttccgtggatccgtcgaaggttgatgt 23026257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 199 - 381
Target Start/End: Original strand, 18836257 - 18836439
Alignment:
Q  199 ttttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcg 298  Q
    ||||||||||||| || |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| |    
T  18836257 ttttggtgtattcaaaatctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttggaagagaaccagttatgtgctaagttatctaagtg 18836356  T
Q  299 tgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    ||||||||||||||||| |||||| |||| |||||| |||||||||| |||||||||||||  |||||| |||||||||||||    
T  18836357 tgagttttggttgaagggagtgagcttccttggtcacgtgatttctaagggtggtatttctgtggatccgtctaaggttgatg 18836439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 239 - 381
Target Start/End: Complemental strand, 18578101 - 18577959
Alignment:
Q  239 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtg 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  18578101 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagtatgagttttggttgaaggaagtgagtttccttggtcatgtg 18578002  T
Q  339 atttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    ||||||| |||||||||||||   |||||||||||||||||||    
T  18578001 atttctaagggtggtatttctgcagatccttctaaggttgatg 18577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 239 - 381
Target Start/End: Original strand, 19985805 - 19985947
Alignment:
Q  239 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtg 338  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||||||||    
T  19985805 tttgaggattgtgttgcaggtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagcgagttttcttggtcatgtg 19985904  T
Q  339 atttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    ||||||| |||||||||||||  ||||||||||||||||||||    
T  19985905 atttctaagggtggtatttctgtggatccttctaaggttgatg 19985947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 16234898 - 16234778
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 360  Q
    ||||| ||||| || ||||||||||||||||||||| |||| |||||||||||||||| ||||||||  |||||||||||||||| |||||||||||||     
T  16234898 ttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttggttgaaggaagggagtttcctgggtcatgtgatttctaagggtggtatttctg 16234799  T
Q  361 gggatccttctaaggttgatg 381  Q
     ||||||| ||||||||||||    
T  16234798 tggatcctcctaaggttgatg 16234778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 21929074 - 21928979
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatt 356  Q
    ||||| ||||| || || |||||||||||||| ||| ||||||||||||||  ||||| |||||||| ||||||||||||||||| ||||||||||    
T  21929074 ttgaaggagaatcagttgtgtgctaagttgtcaaagtgtgagttttggttgcgggaagggagtttccttggtcatgtgatttctaagggtggtatt 21928979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 344
Target Start/End: Original strand, 18965599 - 18965789
Alignment:
Q  154 ttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgtt 253  Q
    ||||| ||||||| || || ||||| ||  |||| || |||||||||||| | ||| | || ||||| || || |||||||||||||||| |||||| ||    
T  18965599 ttcatgcttatttagatcgctttgttgttttgttcattgatgatattttgatatatgctaagtctgaagaagaacattctgagcatttgaagattgtttt 18965698  T
Q  254 gcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
     |||||  ||||||||||  | |||| |||||||||||| ||| |||| || |||||||| || |||||||||| ||| ||| | ||||||    
T  18965699 tcaagtgatgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggtgagtttccttggccatattatttct 18965789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 164 - 343
Target Start/End: Original strand, 2873117 - 2873296
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || ||||||||  ||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  2873117 tttggatcggtttgtggttatgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 2873216  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    || |||||  |  | | |||||| ||||||||| |||| ||||||||||| ||||||||||||| ||| ||||| |||||    
T  2873217 aaggagaagaagctttatgctaaattgtctaagtgtgaattttggttgaaagaagtgagtttccttggccatgttatttc 2873296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 344
Target Start/End: Original strand, 18406223 - 18406438
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||||||||| || || || |||||||||||| | || || ||  |||| || || |    
T  18406223 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccaagactgaagaagaac 18406322  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || ||||||||||||   | || |||||||| |||||||||||  || ||| |||||| |||| |||| |||| || |||||||| |||||||| || |     
T  18406323 atgctgagcatttgaaactggttttgcaagtgttgaaagagaagaaactatatgctaaattgtttaagtgtgaattctggttgaaagaagtgagctttct 18406422  T
Q  329 tggtcatgtgatttct 344  Q
    ||| ||||| ||||||    
T  18406423 tggacatgttatttct 18406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 72 - 259
Target Start/End: Original strand, 23085993 - 23086180
Alignment:
Q  72 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 171  Q
    |||||||| ||||| |||||  ||||||| || || ||  | |||||||| ||||| |||||||| ||||||||| | || |||||| | |||||||| |    
T  23085993 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatc 23086092  T
Q  172 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagt 259  Q
    | || ||||| ||||| || |||||||||||| | || || || | ||| || || ||| |||||||||||| |||||| ||||||||    
T  23086093 gcttcgtggttgtgttcatcgatgatattttgatatactctaagtatgaagaagaacatgctgagcatttgaagattgttttgcaagt 23086180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 183
Target Start/End: Original strand, 14643664 - 14643817
Alignment:
Q  27 agagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtg 126  Q
    ||||||||| |||| ||||| ||||| || |  ||| |||| || ||||||||||  || |||||| ||||||||||||| ||  || ||||||  ||||    
T  14643664 agagtgaagacggaggatatttccaagactgcattccgaactagatatggacact--ga-tattctgtgatgccatttggtgttactgatgcgcatggtg 14643760  T
Q  127 tctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtgg 183  Q
    |||| |||||||| ||||||||||| || |||||||||||||| |  ||||||||||    
T  14643761 tcttcatggaatatatgaatagaatcttccatccttatttggatcagtttgtggtgg 14643817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 129 - 342
Target Start/End: Complemental strand, 23080471 - 23080258
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | | | || ||||| ||||| ||||| || |||||||||||| | || || || |||||||| || |    
T  23080471 tttatggagtacatgaatcgcatttttcatgcatttctagatcgtttcgtggttgtgttcatcgatgatattttgatttactccaagtctgaggaagaac 23080372  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || |||||||||||| |||||| ||||||||  ||||||||||  || | | |||||| || || |||  ||| || |||||||| || ||||||||||     
T  23080371 atgctgagcatttgaagattgttttgcaagtgctgaaagagaagaaactttatgctaaattatcaaagtttgaattctggttgaaagaggtgagtttcct 23080272  T
Q  329 tggtcatgtgattt 342  Q
    ||| ||||| ||||    
T  23080271 tggccatgttattt 23080258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 24294096 - 24294257
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  24294096 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 24294195  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  24294196 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 24294257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 22828737 - 22828849
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | |||    
T  22828737 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttgg 22828836  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  22828837 ccatgttatttct 22828849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 271
Target Start/End: Complemental strand, 19881317 - 19881158
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| || ||||| || |||||||| || |||||| ||||  ||||    |||||||| ||||| || ||||| |||||| | |||||    
T  19881317 ctaatgcgcctggtgtgttcatggagtatatgaataggatttttcatgcttacctggataaatttgtggttgtgttcattgatgacattttgatctattc 19881218  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    ||   ||||||| |||||| | || ||| |||||||||| |||||||| |||||||||||    
T  19881217 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaa 19881158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 310
Target Start/End: Original strand, 14378240 - 14378376
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| || ||||| ||||||| | || | ||||| ||  |||| ||||||||| | |||||| ||| |||||| ||||||||||||||||||||      
T  14378240 tttgtggttgtatttattgatgatagtctgatttattctaagactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaa 14378339  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggtt 310  Q
    | || | ||| |||||||| ||  |||||||||||||    
T  14378340 agttgtatgccaagttgtcgaaatgtgagttttggtt 14378376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 310
Target Start/End: Original strand, 14379790 - 14379926
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| || ||||| ||||||| | || | ||||| ||  |||| ||||||||| | |||||| ||| |||||| ||||||||||||||||||||      
T  14379790 tttgtggttgtatttattgatgatagtctgatttattctaagactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaa 14379889  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggtt 310  Q
    | || | ||| |||||||| ||  |||||||||||||    
T  14379890 agttgtatgccaagttgtcgaaatgtgagttttggtt 14379926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 344
Target Start/End: Original strand, 18196047 - 18196227
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| ||||||||||| ||||| ||  ||||||||||| | || || || || || || |||||| || ||||||||| |||||| ||||||||  ||    
T  18196047 tttggatcgttttgtggttgtgttcatttatgatattttgatatactccaagtccgaagaagagcatgctaagcatttgaagattgttttgcaagtgctg 18196146  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    ||||||||  |  ||| |||||| ||||| |||  ||| ||||||||||| || |||| ||| | ||| ||||| ||||||    
T  18196147 aaagagaagaagctatatgctaaattgtcaaagtatgaattttggttgaaagatgtgaattttcttggccatgttatttct 18196227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 344
Target Start/End: Complemental strand, 19866654 - 19866474
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| || ||||| |||||||||||| | || || ||  ||||  | || ||| |||||||| ||| |||||| |||||||| |||    
T  19866654 tttggatcgctttgtggttgtttttatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttg 19866555  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    ||||||||  || | | ||||||  | |||||||||||||| |||||||| || || ||||| | ||| ||||| ||||||    
T  19866554 aaagagaagaaactttatgctaaactatctaagcgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 19866474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 344
Target Start/End: Original strand, 20634219 - 20634434
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || || || ||| | || || |    
T  20634219 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttattgatgatattttgatttactccaagtctaaagaagaac 20634318  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || |||||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||||||| |||| || |||||||| |||||||| || |     
T  20634319 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 20634418  T
Q  329 tggtcatgtgatttct 344  Q
    ||| ||||| ||||||    
T  20634419 tggacatgttatttct 20634434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 19487582 - 19487687
Alignment:
Q  160 cttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagt 259  Q
    |||||||||| || |||||||| || ||||| ||||| || ||| | ||||| || ||||| || |||||| | |||||||| | |||||||||||||||    
T  19487582 cttatttggatcggtttgtggttgtttttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcatttaaagattgtgttgcaagt 19487681  T
Q  260 cttgaa 265  Q
     |||||    
T  19487682 gttgaa 19487687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 322
Target Start/End: Original strand, 22760734 - 22760927
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || |||||  ||||||||||| | || || || ||||| || ||||    
T  22760734 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttattaatgatattttgatttactccaagtctgaagaagagc 22760833  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgag 322  Q
    || |||||||||||| | | || ||| |||| |||||||||||  |  | | ||| || ||||||||| |||| || |||||||| ||||||||    
T  22760834 atgctgagcatttgaagctggttttgtaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgag 22760927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 343
Target Start/End: Original strand, 28261581 - 28261690
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 333  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| ||||||||||||| ||| |    
T  28261581 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggcc 28261680  T
Q  334 atgtgatttc 343  Q
    |||| |||||    
T  28261681 atgttatttc 28261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 343
Target Start/End: Complemental strand, 28284335 - 28284226
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 333  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| ||||||||||||| ||| |    
T  28284335 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggcc 28284236  T
Q  334 atgtgatttc 343  Q
    |||| |||||    
T  28284235 atgttatttc 28284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 343
Target Start/End: Original strand, 28340330 - 28340439
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 333  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| ||||||||||||| ||| |    
T  28340330 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggcc 28340429  T
Q  334 atgtgatttc 343  Q
    |||| |||||    
T  28340430 atgttatttc 28340439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 27564215 - 27564327
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| |||| || |||||||| ||||| ||||| | |||    
T  27564215 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaagtaagttttcttgg 27564314  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  27564315 ccatgttatttct 27564327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 344
Target Start/End: Original strand, 25608140 - 25608355
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || || || || ||||| |||||||||||| | || || || ||||| || ||      
T  25608140 tttatggagtacatgaattgcatctttcatgcatttttggatcgattcgtagttgtttttattgatgatattttgatttactccaagtctgaagaagaag 25608239  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || |||||||||||| |||||| || ||||| |||||||||||  |  | | |||||| ||||| ||| |||| || |||||||| || || ||||| |     
T  25608240 atgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagaggtaagttttct 25608339  T
Q  329 tggtcatgtgatttct 344  Q
    ||| ||||| ||||||    
T  25608340 tggccatgttatttct 25608355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 331
Target Start/End: Complemental strand, 18796576 - 18796490
Alignment:
Q  245 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    ||||||||||||||| |||||||||||  | || | ||| || ||||| ||| ||||||| ||||| || ||||||||||| |||||    
T  18796576 gattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaaatgaagtgagttttcatgg 18796490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 343
Target Start/End: Complemental strand, 27189322 - 27189224
Alignment:
Q  245 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    |||||| || ||||| |||||||||||  || | | |||||| ||||| ||| |||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  27189322 gattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtccaagtgtgaattctggttgaaagaagtgagtttccttggccatgttatttc 27189224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 343
Target Start/End: Original strand, 27259918 - 27260016
Alignment:
Q  245 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    |||||| || ||||| |||||||||||  || | | |||||| ||||| ||| |||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  27259918 gattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtccaagtgtgaattctggttgaaagaagtgagtttccttggccatgttatttc 27260016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 381
Target Start/End: Original strand, 34643868 - 34644117
Alignment:
Q  132 atggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcatt 231  Q
    ||||| || ||||||||||| |||||| ||||| ||||    |||||||| ||||  || ||||| |||||| | |||||||   | ||||| ||||||     
T  34643868 atggagtatatgaatagaatttttcatgcttatctggataaatttgtggttgtgtacattgatgacattttgatctattcgacaacggaggaagagcatg 34643967  T
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    | || ||| | || |||||||||||||| |||||||||||  | || | ||| || ||||| ||| ||||||| ||||| |  ||||| ||||||| |||    
T  34643968 cagaacatctaagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtaagtttccttgg 34644067  T
Q  332 tcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
     ||| | ||||||    |||||||| |   ||||||||| ||||||||||    
T  34644068 ccatattatttctggaagtggtattgcagtggatccttcaaaggttgatg 34644117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 15461293 - 15461197
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagaga 270  Q
    ||||||||||||||||||||||||||| || | ||||| ||  |||| ||||| ||  | || || |||| ||||||||||||  | ||||||||||    
T  15461293 tttgtggtggtgtttatagatgatattctgatttattctaaaactgaagaggaacacgccgaacacttgaagattgtgttgcagattttgaaagaga 15461197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 16926020 - 16926132
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| ||||| |||||| |||| || |||||||| || || ||||| | |||    
T  16926020 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaagttatctaagtgtgaattctggttgaaagaggtaagttttcttgg 16926119  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  16926120 ccatgtcatttct 16926132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 282; Significance: 1e-158; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 23507849 - 23507484
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 23507650  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||||||||| ||||||||||||||||||    
T  23507649 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaaccagtgatgtgcaaagttgtctaagtgtgagttttggttgaagg 23507550  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |  ||||||||||||||||||||    
T  23507549 aagtgagtttccttggtcatgtgatttctaagggtggtatttatgtggatccttctaaggttgatg 23507484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 21935391 - 21935756
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 21935590  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  21935591 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 21935690  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  21935691 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 21935756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 24583375 - 24583010
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| |||||  |||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 24583176  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    | |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| || || || |||||||||||| ||||||||||||||||||    
T  24583175 tttgaggaagagcatgctgagcatttgagaattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 24583076  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||  |||||||| ||||||||||    
T  24583075 aagtgagtttccttggtcatgtgatttctaagggtggtatttctatagatccttccaaggttgatg 24583010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 276 - 381
Target Start/End: Complemental strand, 23505149 - 23505044
Alignment:
Q  276 ttatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaagg 375  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |  ||||||||| ||||    
T  23505149 ttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtggatccttcaaagg 23505050  T
Q  376 ttgatg 381  Q
    ||||||    
T  23505049 ttgatg 23505044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 193
Target Start/End: Original strand, 20250535 - 20250664
Alignment:
Q  64 gaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctta 163  Q
    |||| ||||||||||| |||||||||| ||| ||||||||||| ||| |||| | | |||||  |||||||||||| |||||||| || || ||||||||    
T  20250535 gaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaatatatgaataggattttccatcctta 20250634  T
Q  164 tttggaccgttttgtggtggtgtttataga 193  Q
    |||||| |  |||||||||||| |||||||    
T  20250635 tttggatcaatttgtggtggtgcttataga 20250664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 259
Target Start/End: Complemental strand, 21409220 - 21409074
Alignment:
Q  113 taatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcg 212  Q
    |||||||||||| || ||||||||||| |||||| | || |||||| ||||| | || |||||||| || |||||||||||||||||| ||   || ||     
T  21409220 taatgcgccaggagtatttatggaatatatgaattgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatattctgaaatactct 21409121  T
Q  213 aattctgaggaggagcattctgagcatttgaggattgtgttgcaagt 259  Q
    || ||||||||||| ||| | ||||||||||| ||||| ||||||||    
T  21409120 aagtctgaggaggaacatgccgagcatttgagaattgttttgcaagt 21409074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 72 - 344
Target Start/End: Original strand, 20466358 - 20466630
Alignment:
Q  72 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 171  Q
    |||||||| || || |||||  ||||||| ||||| ||  ||||||| || ||||| |||||| | ||||||||| | || |||||| | ||||| || |    
T  20466358 tatggacattacgaatattcagtgatgccttttggtgttactaatgcaccgggtgtgtttatgaagtacatgaatcgtatttttcatgcgtatttagatc 20466457  T
Q  172 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    | || ||||| ||| | || |||||||||||| | || || || ||||| || || |||  ||||||||||| |||||| ||||||||  |||| |||||    
T  20466458 gcttcgtggttgtgatcatcgatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaa 20466557  T
Q  272 ccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
      | |||| ||| |||||||| ||| ||||||| |||||||| || |||||||| | ||| ||||| ||||||    
T  20466558 gaagttatatgccaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttatttct 20466630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 344
Target Start/End: Complemental strand, 23473312 - 23473082
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| | |||||| ||||||||| | || |||||| | | |||||| ||||| ||||| ||||| || || ||||||||| |||| || |    
T  23473312 aatgcgccaggtgtgtctatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatgtactcaa 23473213  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    | ||||| || || ||| |||||| ||| |   |||| ||||||||  ||||||||||  | |||| |||||| ||||| ||| ||||||| | ||||||    
T  23473212 agtctgaagaagaacatgctgagcgtttaaaagttgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgagttctagttgaa 23473113  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || |||||||| | ||| ||||| ||||||    
T  23473112 tgaggtgagttttcttggccatgttatttct 23473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 14998090 - 14998251
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| ||||| ||| |||||||| ||| |||||| |||||||| |||    
T  14998090 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaggaacatgctgagcatctgaagattgttttgcaagtgttg 14998189  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  14998190 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 14998251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 37289847 - 37290008
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  37289847 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 37289946  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  37289947 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 37290008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 22136703 - 22136542
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || || |||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  22136703 tttggatcggtttgtggttgtgtttatcgacgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 22136604  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  22136603 aaagagaagaaactttttgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 22136542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 22331238 - 22331399
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  22331238 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 22331337  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  22331338 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 22331399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 27612389 - 27612228
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || || ||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  27612389 tttggatcggttcgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttg 27612290  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  27612289 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27612228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 343
Target Start/End: Complemental strand, 40710815 - 40710636
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||    
T  40710815 tttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 40710716  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| || |||||||||| ||| ||||| |||||    
T  40710715 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 40710636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 342
Target Start/End: Complemental strand, 22349886 - 22349776
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | |||    
T  22349886 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttgg 22349787  T
Q  332 tcatgtgattt 342  Q
     ||||| ||||    
T  22349786 ccatgttattt 22349776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 27520441 - 27520280
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||  | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||    
T  27520441 tttggatcggtttgtggttgtgtttatcgacgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 27520342  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  27520341 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27520280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 343
Target Start/End: Original strand, 27666911 - 27667020
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 333  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||||| ||| |    
T  27666911 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttggcc 27667010  T
Q  334 atgtgatttc 343  Q
    |||| |||||    
T  27667011 atgttatttc 27667020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 325
Target Start/End: Original strand, 29474389 - 29474585
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| || |||||| | || |||||| | | |||||| |  |||||||| |||||||| |||||||||||| | || || ||  |||| || || |    
T  29474389 tttatggagtatatgaatcgcatctttcatgcatttttggatcagtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 29474488  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    || |||||||| ||| |||||| |||||||| |||||||||||  || | | || ||| || || ||| |||| || |||||||| |||||||||||    
T  29474489 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgataaattatcgaagtgtgaattctggttgaaagaagtgagttt 29474585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 325
Target Start/End: Original strand, 21337595 - 21337806
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||||||||||||| | || |||||| | | ||||||  | || ||||| || || || || ||||||||| | || || |    
T  21337595 aatgcgccaggtgtgtttatggaatacatgaatcgtatttttcatgcgtttttggatagcttagtggttgtattcatcgacgatattttgatttactcca 21337694  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    | | ||| || || ||| ||||||| |||| |||||| ||||||||  ||||||||||  || | | |||||| || || ||| |||| || ||||||||    
T  21337695 agtttgaagaagaacatgctgagcacttgaagattgttttgcaagtgctgaaagagaagaaactttatgctaaattatcaaagtgtgaattctggttgaa 21337794  T
Q  314 ggaagtgagttt 325  Q
     || ||||||||    
T  21337795 agaggtgagttt 21337806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 344
Target Start/End: Complemental strand, 25428503 - 25428288
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | ||||||||| || ||||| || ||||| |||||||||||| | || || || ||||| || || |    
T  25428503 tttatggagtacatgaatcgcatctttcatgcatttttggaccgattcgtggttgtttttattgatgatattttgatttactccaagtctgaagaagaac 25428404  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || ||||||||||||   | || |||||||| |||||||||||  |  | | ||| || ||||||||| |||| || | |||||| |||||||| || |     
T  25428403 atgctgagcatttgaatctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctagttgaaagaagtgagctttct 25428304  T
Q  329 tggtcatgtgatttct 344  Q
    ||| ||||| ||||||    
T  25428303 tggacatgttatttct 25428288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 22463958 - 22463876
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgca 256  Q
    ||||||||||| |||||||||||||||||| | ||||| ||  |||| ||||||||| | || || |||| ||||||||||||    
T  22463958 tttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagcatgcagaacacttgaagattgtgttgca 22463876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 41772877 - 41772716
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||| ||| | || || ||  |||| || || ||| | |||||| ||| |||||| |||||||| |||    
T  41772877 tttggatcggtttgtggttgtgtttatcgacgatatcttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttg 41772778  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  | || | |||||| ||||||||  |||| || |||||||| |||||||||||    
T  41772777 aaagagaagaatttttatgctaaattgtctaaatgtgaattctggttgaaagaagtgagttt 41772716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 18781081 - 18780969
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || || ||||||||||| ||||| | |||    
T  18781081 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttttgcgaaattgtctaagtgtgaattctgattgaaggaagtaagttttcttgg 18780982  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  18780981 ccatgttatttct 18780969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 325
Target Start/End: Complemental strand, 19771925 - 19771834
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  19771925 gagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 19771834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 325
Target Start/End: Complemental strand, 16358518 - 16358376
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16358518 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 16358419  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||| ||||||||| |||| || |||||||| |||||||||||    
T  16358418 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 16358376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 344
Target Start/End: Original strand, 26737028 - 26737258
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    ||||| || ||||| |||||||| |||||||||  ||| |||||| | | ||| || ||||| ||||| ||||| || |||||||||||| | || || |    
T  26737028 aatgcacctggtgtgtttatggagtacatgaatcaaatttttcatgcatttttagatcgtttcgtggttgtgttcatcgatgatattttgatttactcca 26737127  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    | || || || || ||| |||| ||||||| |||| | ||||||||  ||||||| ||  | |||| |||||| || || ||| |||| || ||||||||    
T  26737128 agtccgaagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagataagaagttatatgctaaattatcaaagtgtgaattctggttgaa 26737227  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || || ||||| | ||| ||||| ||||||    
T  26737228 agaggtaagttttcttggccatgttatttct 26737258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 325
Target Start/End: Complemental strand, 34568510 - 34568368
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  34568510 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 34568411  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||| ||||||||| |||| || |||||||| |||||||||||    
T  34568410 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 34568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 20344289 - 20344192
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    ||||| ||||||||||| |||||||| ||  | ||||| ||   ||| ||||||||| | |||||| |||| ||||| |||||||| |||||||||||    
T  20344289 tttgttgtggtgtttattgatgatatcttaatttattccaagaatgaagaggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaa 20344192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 203
Target Start/End: Complemental strand, 20777920 - 20777891
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttg 203  Q
    ||||||||||||||||||||||||||||||    
T  20777920 tttgtggtggtgtttatagatgatattttg 20777891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 21562323 - 21562476
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||| | ||||| |||||||| |||||||||||||| || ||| | ||||| ||  | ||||| || |||||||||||||| ||  || | |||||    
T  21562323 ctaatgcgtctggtgtgtttatggagtacatgaatagaattttccatgcctatttagattggtttgtagttgtgtttatagatgacatcctgatttattc 21562422  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||  |||| || |||||| | |||||||| |  |||||||| ||||| |||||    
T  21562423 taagactgaagaagagcatgcagagcatttaaaaattgtgtttcaagtgttgaa 21562476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 27683751 - 27683912
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| ||  |||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  27683751 tttggatcggtttgtggttgtgtttatcgacaatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttg 27683850  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    | ||||||  |  | | |||||| ||||||||| |||| || ||||| || |||||||||||    
T  27683851 agagagaagaagctttatgctaaattgtctaagtgtgaattctggttcaaagaagtgagttt 27683912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 30139686 - 30139321
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 30139487  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  30139486 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 30139387  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  30139386 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 30139321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 30149237 - 30148872
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 30149038  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  30149037 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 30148938  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  30148937 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 30148872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 8272659 - 8273024
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 8272858  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || || || |||||||||||| ||||||||||||||||||    
T  8272859 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 8272958  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  8272959 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 8273024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 15611983 - 15611618
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 15611784  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||| |||||||| |||||||| ||||  || ||||| |||||||||||||||||||||||||||||||    
T  15611783 tctgaggaagagcatgctgagcatttgaggattgtcttgcaagttttgaaagataaccggttgtgtgccaagttgtctaagcgtgagttttggttgaagg 15611684  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  15611683 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 15611618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 16 - 374
Target Start/End: Original strand, 6151113 - 6151471
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||     
T  6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaa 6151312  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  6151313 tctgaggaggagcatgctgagcatctgacgattgtgttgcaagtgttgaaggagaaccagttatgtgctaagttgtctaagtgcgagttttggttgaagg 6151412  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaag 374  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  |||||| ||||||    
T  6151413 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccgtctaag 6151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 13965612 - 13965978
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||| ||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 13965811  T
Q  216 tctgagg-aggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaag 314  Q
    ||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||| || | ||| || ||||||||| |||||||||||||||||    
T  13965812 tctgaggaagaagcatgctgagcatttgaggattgtgttgcaagacttgaaagagaaccagttgtctgccaatttgtctaagtgtgagttttggttgaag 13965911  T
Q  315 gaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  13965912 gaagtgagttttcttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 13965978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 25768198 - 25767833
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||||||||||||||| || || |||||||||||||||| ||||  ||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    | ||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||     
T  25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcaaaa 25767999  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  25767998 tctgagaaggagcatgctgagcatttgaggattatgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 25767899  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||  ||||||||||| |  ||||||||| || |||||||    
T  25767898 aagtgagtttccttggtcatgtgatttctcagggtggtatttatgtggatccttcgaaagttgatg 25767833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 322
Target Start/End: Original strand, 15948730 - 15949036
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||  ||||||||||||||||||| ||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||     
T  15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccgatttgtggtggttttcatagatgatattttggtgtattcgaag 15948929  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||| || || || |||||||||||| |||| |||||||||||||    
T  15948930 tctgaggaagagcatgttgagcatctgaggattgtgttgcaagtcttgaaagagaaccagttgtgagccaagttgtctaagtgtgaattttggttgaagg 15949029  T
Q  316 aagtgag 322  Q
    |||||||    
T  15949030 aagtgag 15949036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 12795871 - 12795751
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 360  Q
    ||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||| ||||||||     
T  12795871 ttgaaagagaaccaattgtgtgccaagttgtctaagtgtgagtcttggttgaaggaagtgagttttcttggtcatgtgatttctaagggtagtatttctg 12795772  T
Q  361 gggatccttctaaggttgatg 381  Q
     ||||||||||||||||||||    
T  12795771 tggatccttctaaggttgatg 12795751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 261 - 382
Target Start/End: Complemental strand, 18915361 - 18915240
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 360  Q
    ||||| |||||| | ||||||||||||||||| ||| |||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||     
T  18915361 ttgaaggagaactagttatgtgctaagttgtccaagtgtgaattttggttgaaggaagtaagtttccttggtcatgtgatttctaagggtggtatttctg 18915262  T
Q  361 gggatccttctaaggttgatgt 382  Q
      |||||||| |||||||||||    
T  18915261 ttgatccttccaaggttgatgt 18915240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 16258774 - 16258658
Alignment:
Q  265 aagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctaggga 364  Q
    ||||||| || || ||||| |||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    |||    
T  16258774 aagagaatcagttgtgtgcaaagttgtctaagtgcgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttacgtgga 16258675  T
Q  365 tccttctaaggttgatg 381  Q
    |||||||||||||||||    
T  16258674 tccttctaaggttgatg 16258658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 204 - 343
Target Start/End: Original strand, 6710865 - 6711004
Alignment:
Q  204 gtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagt 303  Q
    |||||||| || || |||||||||||| ||||||||||||||||||||||||  || ||||| ||||| || || | |||||||||||||||| ||||||    
T  6710865 gtgtattcaaagtcagaggaggagcatgctgagcatttgaggattgtgttgcgtgttttgaaggagaatcagttgtttgctaagttgtctaagtgtgagt 6710964  T
Q  304 tttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    |||||||   |||||||||||||| |||| ||||||||||    
T  6710965 tttggttttgggaagtgagtttccttggttatgtgatttc 6711004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 381
Target Start/End: Original strand, 55514237 - 55514357
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 360  Q
    ||||| ||||| || ||||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||| ||||||||| ||      
T  55514237 ttgaaggagaatcatttatgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtggtatctccg 55514336  T
Q  361 gggatccttctaaggttgatg 381  Q
     |||||| || ||||||||||    
T  55514337 tggatccatcaaaggttgatg 55514357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 164 - 344
Target Start/End: Complemental strand, 15340991 - 15340811
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||| ||| |||    
T  15340991 tttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcgagtgttg 15340892  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    ||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | ||| ||||| ||||||    
T  15340891 aaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 15340811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 164 - 344
Target Start/End: Original strand, 15400925 - 15401105
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||| ||| |||    
T  15400925 tttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcgagtgttg 15401024  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    ||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | ||| ||||| ||||||    
T  15401025 aaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 15401105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 129 - 325
Target Start/End: Original strand, 15723307 - 15723503
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| || |||||| | || |||||| | | |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || |    
T  15723307 tttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 15723406  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    || |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||| ||| |||| || |||||||| |||||||||||    
T  15723407 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagtgagttt 15723503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 344
Target Start/End: Complemental strand, 15261402 - 15261172
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || || || |||||||||||| | ||||| |    
T  15261402 aatgcgccaggtgtgtttatggagtacatgaatcgtatctttcatgcgtttttggatcgtttcgtggttgtattcatcgatgatattttgatatattcca 15261303  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  |||| || || ||| |||||||||||| |||||| ||||||||  |||| |||||  |  | | |||||| ||||  ||| |||| || ||||||||    
T  15261302 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagaagctttatgctaaattgtaaaagtgtgaattctggttgaa 15261203  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || |||||||| | ||| ||||| ||||||    
T  15261202 agaggtgagttttcttggccatgttatttct 15261172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 55498611 - 55498486
Alignment:
Q  137 atacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgag 236  Q
    ||||||||| || || || ||||||||||||||    ||  ||||||||||||| |||||||| || ||||||||||| || |||||| ||||| | |||    
T  55498611 atacatgaaaaggattttccatccttatttggatatgttcatggtggtgtttatcgatgatatcttagtgtattcgaagtcggaggagcagcatgcagag 55498512  T
Q  237 catttgaggattgtgttgcaagtctt 262  Q
    ||||| ||||||||||||||| ||||    
T  55498511 catttcaggattgtgttgcaaatctt 55498486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 325
Target Start/End: Original strand, 11950318 - 11950466
Alignment:
Q  177 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaat 276  Q
    ||||| |||||||| ||||||||| || | ||||| ||  |||| || |||||| | || ||||||| ||||||||||||||| |||||||||||  | |    
T  11950318 gtggttgtgtttattgatgatattctgatttattctaagactgaagaagagcatgcagaacatttgaagattgtgttgcaagtattgaaagagaagaagt 11950417  T
Q  277 tatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    | | |||||||||||| ||| ||||||| ||||| |  |||||||||||    
T  11950418 tgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 11950466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 11889636 - 11889783
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||||||||| || ||||||||||||||| | || |||||| | ||||| || || || ||||| ||||| || |||||||||||| | || ||    
T  11889636 ctaatgcgccaggtgtgttcatggaatacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcattgatgatattttgatatactc 11889735  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagt 259  Q
     || | | |||| || ||| |||||||||||| |||||| ||||||||    
T  11889736 taagtttaaggaagaacatgctgagcatttgaagattgttttgcaagt 11889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 380
Target Start/End: Complemental strand, 18751558 - 18751459
Alignment:
Q  281 tgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgat 380  Q
    |||||||||||| ||| ||||||||| ||||  |||||||||||||| | ||||||||||||||| ||||||||| |||  |||||| |  |||||||||    
T  18751558 tgctaagttgtcgaagtgtgagtttttgttgcgggaagtgagtttcctttgtcatgtgatttctaagggtggtatctctgtggatccgttgaaggttgat 18751459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 13254412 - 13254251
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  13254412 tttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 13254313  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  13254312 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 13254251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 325
Target Start/End: Original strand, 14874875 - 14875068
Alignment:
Q  132 atggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcatt 231  Q
    ||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || || ||  |||| || || |||     
T  14874875 atggagtacatgaatcgcatctttcatgcctttttggatcgattcgtggttgtttttatcgatgatattttgatttactccaagactgaagaagaacatg 14874974  T
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| ||||||| |||||||| ||||| |||||    
T  14874975 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaagtaagttt 14875068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 15346653 - 15346814
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  15346653 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 15346752  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  15346753 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 15346814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 16693867 - 16693706
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    ||||||||||| || |||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  || | | ||    
T  16693867 gtgtttatagacgaaattttgatatactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 16693768  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    |||| ||||||||| ||||||| |||||||| ||||| ||||| | ||||||||| ||||||    
T  16693767 ctaaattgtctaagtgtgagttctggttgaaagaagtaagttttcttggtcatgttatttct 16693706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 6602390 - 6602278
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||||| |||    
T  6602390 ctgagcatctgacgattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttgg 6602291  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  6602290 ccatgttatttct 6602278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 325
Target Start/End: Original strand, 20060472 - 20060623
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| | |||||| ||| |||||| |||||||| |||||||||||      
T  20060472 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaaga 20060571  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    || | | ||| || ||||||||| |||| ||||||||||| |||||||||||    
T  20060572 aactttatgccaaattgtctaagtgtgaattttggttgaaagaagtgagttt 20060623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 344
Target Start/End: Complemental strand, 41179241 - 41179074
Alignment:
Q  177 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaat 276  Q
    |||||||| ||||| ||||||||| || | ||||||||  |||| || |||||||| || ||| |||| |||||| ||||||| |||||||||||  | |    
T  41179241 gtggtggtatttattgatgatattctgatttattcgaagactgaagaagagcattcagaacatctgagaattgtgctgcaagttttgaaagagaagaagt 41179142  T
Q  277 tatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    | | ||| || ||||| ||  ||||||||||| | |  ||||||||||||| ||||||| | ||||||    
T  41179141 tgtatgccaaattgtcgaaatgtgagttttggctaagtgaagtgagtttccttggtcatattatttct 41179074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 325
Target Start/End: Complemental strand, 10007258 - 10007161
Alignment:
Q  228 cattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  10007258 cattctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10007161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 14088457 - 14088244
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  14088457 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 14088358  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    ||   ||||||| |||||| | || ||| |||||||||| |||||||| |||||||||||  | || | ||| || ||||| ||| | |||||||||||     
T  14088357 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 14088258  T
Q  312 aaggaagtgagttt 325  Q
    |  |||||||||||    
T  14088257 agtgaagtgagttt 14088244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 15014112 - 15014325
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| || || ||||||||||| |||||| | || |||||| |||||||||| || ||||| || |||||||||||||||||| |  | || ||    
T  15014112 ctaacgcgcctggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatcgatttgttgttgtgtttatagatgatattctaatatactc 15014211  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     ||  | |||||||| ||| | |||||||  || ||||| ||||||||  |||| |||||  | |||| ||| ||||| || ||| | || || ||||||    
T  15014212 taagaccgaggaggaacatgccgagcattgtagaattgttttgcaagtgctgaaggagaagaagttatatgccaagttatcgaagtgcgaattctggttg 15014311  T
Q  312 aaggaagtgagttt 325  Q
    || |||||||||||    
T  15014312 aacgaagtgagttt 15014325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 345
Target Start/End: Original strand, 16805423 - 16805536
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||| ||||| | |||    
T  16805423 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttgg 16805522  T
Q  332 tcatgtgatttcta 345  Q
     ||||| |||||||    
T  16805523 ccatgttatttcta 16805536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 265
Target Start/End: Complemental strand, 28756102 - 28755949
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||| ||  | |||||    
T  28756102 ctaatgcgccgggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 28756003  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| |||||||||||||| |||||    
T  28756002 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaa 28755949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 325
Target Start/End: Original strand, 15587810 - 15587961
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| |||||||| || ||||||||| | || || ||  |||| || || |||  ||||||| ||| |||||| || ||||| |||||||||||      
T  15587810 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgttgagcatctgaagattgtcttacaagtgttgaaagagaaga 15587909  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  15587910 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 15587961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 343
Target Start/End: Original strand, 5423408 - 5423517
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 333  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || | |||||| ||||||||||||| ||| |    
T  5423408 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattcttgttgaatgaagtgagtttccttggcc 5423507  T
Q  334 atgtgatttc 343  Q
    |||| |||||    
T  5423508 atgttatttc 5423517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 325
Target Start/End: Complemental strand, 10907868 - 10907771
Alignment:
Q  228 cattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  10907868 cattttgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10907771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 13970465 - 13970678
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  13970465 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 13970564  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    ||   ||||||| |||||| | || ||| ||||| |||| |||||||| |||||||||||  | || | ||| || ||||| ||| | |||||||||||     
T  13970565 gagaactgaggaagagcatgcagaacatctgagggttgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 13970664  T
Q  312 aaggaagtgagttt 325  Q
    |  |||||||||||    
T  13970665 agtgaagtgagttt 13970678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 343
Target Start/End: Original strand, 16755109 - 16755288
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| | || ||||||| |||||| || ||||| |||    
T  16755109 tttggatcggtttgtggttgtgtttattgacgatattttgatttactccaagactgaagaagaacatgcggaacatttgaagattgttttacaagtgttg 16755208  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    ||||||||  || | | |||||| |||| |  | |||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  16755209 aaagagaagaaactttatgctaaattgtttgtgtgtgaattctggttgaatgaagtgagtttccttggccatgttatttc 16755288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 325
Target Start/End: Complemental strand, 48427099 - 48427008
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  48427099 gagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 48427008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 325
Target Start/End: Complemental strand, 16637476 - 16637334
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16637476 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 16637377  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||| ||||||||| |||| || |||||||| |||||||||||    
T  16637376 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 16637334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 17200514 - 17200484
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatat 46  Q
    |||||||||||||||||||||||||||||||    
T  17200514 atcatcagattagagtgaaggcggaagatat 17200484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 343
Target Start/End: Original strand, 53383523 - 53383605
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  53383523 ttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttggccatgttatttc 53383605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 343
Target Start/End: Complemental strand, 3687595 - 3687486
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 333  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | |||||| || |||||| |||| || |||||||| ||||||||||| |  ||||    
T  3687595 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaagtgagttttctaggtc 3687496  T
Q  334 atgtgatttc 343  Q
    |||| |||||    
T  3687495 atgttatttc 3687486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 16328067 - 16328164
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    ||||| ||||||||||| |||||||||||  | ||||| ||   ||| ||||||||| | |||||| |||| ||||| |||||||  |||||||||||    
T  16328067 tttgttgtggtgtttattgatgatattttaatctattctaagaatgaagaggagcatgcagagcatctgagaattgtattgcaagatttgaaagagaa 16328164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 325
Target Start/End: Complemental strand, 12180009 - 12179909
Alignment:
Q  225 gagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtt 324  Q
    |||||| | |||||| ||| ||||||||||||| | |||||||| ||  | || | |||||||||||| ||| ||||||| ||||| |  ||||||||||    
T  12180009 gagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagtt 12179910  T
Q  325 t 325  Q
    |    
T  12179909 t 12179909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 325
Target Start/End: Original strand, 12359005 - 12359085
Alignment:
Q  245 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||| |||||||| |||||||||||  | || | |||||||||||| ||| ||||||| ||||| |  |||||||||||    
T  12359005 gattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 12359085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 270
Target Start/End: Original strand, 13318829 - 13319005
Alignment:
Q  94 tgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttataga 193  Q
    |||||||||| || ||  |||||||||| ||||| || ||||| || |||||  |||| |||||| ||| | ||||    ||||||||||| ||||| ||    
T  13318829 tgatgccattcggtgttactaatgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttttctggataaatttgtggtggtatttattga 13318928  T
Q  194 tgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagaga 270  Q
    |||||||||  | ||||| ||  || | ||||||||| | || ||| ||| |||| |||||||| | ||||||||||    
T  13318929 tgatattttaatttattccaagactaaagaggagcatgcagaacatctgaagattatgttgcaaattttgaaagaga 13319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 282; Significance: 1e-158; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 20829485 - 20829850
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 20829684  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  20829685 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 20829784  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  20829785 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 20829850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 16 - 344
Target Start/End: Complemental strand, 20927320 - 20926992
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||     
T  20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtggtggtgttcatagatgatattttggtgtattcgaag 20927121  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||    
T  20927120 tctgaggaagagcatgatgagcatttgaggattgtgttgcaagtcttgaaggagaatcagttatgtgctaagttatctaagtgtgagttttggttgaagg 20927021  T
Q  316 aagtgagtttccatggtcatgtgatttct 344  Q
    |||||| ||||| |||||| |||||||||    
T  20927020 aagtgattttccttggtcacgtgatttct 20926992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 16 - 355
Target Start/End: Original strand, 41215949 - 41216288
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||||| || ||| |||| |||||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||     
T  41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgttttatggtggtgtttattgatgatattttggtgtattcgaag 41216148  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||    |||||| |||||||||| ||| ||||||||||||||  ||    
T  41216149 tctgaggaggagcatgctgagcatttgaggattgtgttgcgagtcttgaaggagaattggttatgttctaagttgtcgaagtgtgagttttggttgcggg 41216248  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtat 355  Q
    |||||||||||| | ||||| ||||||||| |||| ||||    
T  41216249 aagtgagtttccttagtcatatgatttctaagggtagtat 41216288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 20527319 - 20527147
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||| ||||||||||||||| ||||||| |||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20527319 atcatctgattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20527220  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgttt 188  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20527219 tgcaccaggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttt 20527147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 42 - 355
Target Start/End: Original strand, 21200998 - 21201311
Alignment:
Q  42 gatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaataca 141  Q
    |||||||||||||| | |||| ||||||| ||||| |||||||| |||||| ||||||||||| | ||  ||||| ||||  ||||||| |||||||| |    
T  21200998 gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatata 21201097  T
Q  142 tgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcattt 241  Q
    ||||||||||||||||||||||| || || | ||||||| ||  |||||||||||||| |||||||||||||| |  ||||||||||||  | ||||| |    
T  21201098 tgaatagaatatttcatccttatctgtactggtttgtggaggcttttatagatgatatcttggtgtattcgaagttggaggaggagcatgttaagcatct 21201197  T
Q  242 gaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatt 341  Q
    |||||||||||||||   |||||| || ||  | || | |||||| ||||| ||| |||| |||||| || |||||||||| || | |||||||||||||    
T  21201198 gaggattgtgttgcataccttgaaggataagaagttgtttgctaacttgtcgaagtgtgaattttggctgcaggaagtgagcttacctggtcatgtgatt 21201297  T
Q  342 tctacgggtggtat 355  Q
    || | |||||||||    
T  21201298 tcgatgggtggtat 21201311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
Q  24 attagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccag 123  Q
    |||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag 22133956  T
Q  124 gtgtctt 130  Q
    |||||||    
T  22133957 gtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatga 85  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 21839068 - 21838907
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  21839068 tttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 21838969  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  21838968 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 21838907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 21832420 - 21832259
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  21832420 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 21832321  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  21832320 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 21832259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 33389270 - 33389431
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  33389270 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 33389369  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  33389370 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 33389431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 51331734 - 51331895
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| | |||||| ||| |||||| |||||||| |||    
T  51331734 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgcggagcatctgaagattgttttgcaagtgttg 51331833  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  | || | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  51331834 aaagagaagaagttttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 51331895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 19108467 - 19108306
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| |||||||||||| | || || ||  ||||  | || ||| |||||||| ||| |||||| || ||||| |||||||||||  || | | ||    
T  19108467 gtgtttatcgatgatattttgatttactctaagactgaaaaagaacatgctgagcatctgaagattgtcttccaagtgttgaaagagaagaaactttatg 19108368  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    | || ||||||||| ||||||| |||||||| ||||||||||| | ||| ||||| ||||||    
T  19108367 ccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 19108306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 31538186 - 31538339
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  31538186 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 31538285  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  31538286 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 31538339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 265
Target Start/End: Complemental strand, 37679250 - 37679097
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| ||||||||| |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  37679250 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 37679151  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||| ||||| | |||||| |||| ||||| |||||||| |||||    
T  37679150 caagaatgaggagaagcatgcagagcatctgagaattgtattgcaagtgttgaa 37679097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 265
Target Start/End: Complemental strand, 48425074 - 48424921
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  48425074 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 48424975  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  48424974 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 48424921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 265
Target Start/End: Complemental strand, 52987942 - 52987789
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  52987942 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 52987843  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  52987842 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 52987789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 20855011 - 20855093
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgca 256  Q
    ||||||||||| |||||||||||||||||| | ||||| ||  |||| ||||||||| | || || |||| ||||||||||||    
T  20855011 tttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagcatgcagaacacttgaagattgtgttgca 20855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 342
Target Start/End: Original strand, 21862574 - 21862792
Alignment:
Q  124 gtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgagga 223  Q
    |||| ||||||||  |||||||| | || |||||| | | |||||||||||| ||||| || ||||| ||||| |||||  | || || ||  |||||||    
T  21862574 gtgtgtttatggagcacatgaatcgcatttttcatgcatttttggaccgtttcgtggttgtttttattgatgacattttaatttactccaagactgagga 21862673  T
Q  224 ggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagt 323  Q
     || ||| |||||||||||| ||| || |||||||| || ||||||||  |  | | |||||| || |||||| |||| || |||||||| || ||||||    
T  21862674 agaacatgctgagcatttgaagatggttttgcaagtgttcaaagagaagaagctttatgctaaattatctaagtgtgaattctggttgaaagaggtgagt 21862773  T
Q  324 ttccatggtcatgtgattt 342  Q
    || | ||| ||||| ||||    
T  21862774 tttcttggacatgttattt 21862792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 343
Target Start/End: Original strand, 41351984 - 41352082
Alignment:
Q  245 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||| | ||||||||| |||||    
T  41351984 gattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggtcatgttatttc 41352082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 343
Target Start/End: Original strand, 16348907 - 16349016
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtc 333  Q
    |||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||||||||| |  ||||    
T  16348907 gagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggtc 16349006  T
Q  334 atgtgatttc 343  Q
    |||| |||||    
T  16349007 atgttatttc 16349016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 17043275 - 17043436
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| |||||||||||| | || || ||  || | || || ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  17043275 gtgtttatcgatgatattttgatttactccaagactaaagaagaacatgctgagcatatgaagattgtcttgcaagtattgaaagagaagaaactttatg 17043374  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    |||| ||||| ||| |||| || |||||||| ||||| ||||| | ||| ||||| ||||||    
T  17043375 ctaaattgtcaaagtgtgaattctggttgaaagaagtaagttttcttggccatgttatttct 17043436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 325
Target Start/End: Complemental strand, 21026223 - 21026130
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||||||  | |||||| ||||||| |||||||| |||||||||||    
T  21026223 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaaatatctaagtgtgagttctggttgaaagaagtgagttt 21026130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 21234040 - 21234152
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||| ||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||||| ||||| | |||    
T  21234040 ctgaacatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttgg 21234139  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  21234140 ccatgttatttct 21234152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 344
Target Start/End: Original strand, 24792857 - 24793037
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || || ||||| || ||||| |||||||||||| | || || ||  |||| || || |||  ||||||| ||| |||||| |||||||| |||    
T  24792857 tttggatcggttcgtggttgtttttattgatgatattttgatttactccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttg 24792956  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    ||||| ||  || | | |||||| || |||||| ||||||| |||||||| ||||| ||||| | ||| ||||| ||||||    
T  24792957 aaagaaaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaagtaagttttcttggccatgttatttct 24793037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 310
Target Start/End: Original strand, 20834154 - 20834287
Alignment:
Q  177 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaat 276  Q
    ||||| |||||||| ||||||||| || | ||||| ||  |||| || || ||| | || ||||||| ||||||||||||| | |||||||||||    |    
T  20834154 gtggttgtgtttattgatgatattctgatttattcaaagactgaagaagaacatgcagaacatttgaagattgtgttgcaaattttgaaagagaaaaggt 20834253  T
Q  277 tatgtgctaagttgtctaagcgtgagttttggtt 310  Q
    | | |||||||||||| ||| ||||||| |||||    
T  20834254 tgtatgctaagttgtcgaagtgtgagttctggtt 20834287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 325
Target Start/End: Original strand, 24097857 - 24098005
Alignment:
Q  177 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaat 276  Q
    |||||||| ||||| ||||| ||| || | ||||| ||  |||| ||||||||| | ||  || ||| |||||| ||| ||||||||||||| ||  | |    
T  24097857 gtggtggtatttattgatgacattctgatctattctaagactgaagaggagcatgcagaaaatctgaagattgtattgtaagtcttgaaagaaaagaagt 24097956  T
Q  277 tatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    | | |||||||||||| ||| ||||||| ||||| |  |||||||||||    
T  24097957 tgtatgctaagttgtcaaagtgtgagttctggttaagtgaagtgagttt 24098005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 278; Significance: 1e-155; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 42540 - 42175
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 42341  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  42340 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 42241  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  42240 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggttgatg 42175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 31797 - 32010
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  31797 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 31896  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    ||   ||||||| |||||| | || ||| |||||||||| |||||||| |||||||||||  | || | ||| || ||||| ||| | |||||||||||     
T  31897 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 31996  T
Q  312 aaggaagtgagttt 325  Q
    |  |||||||||||    
T  31997 agtgaagtgagttt 32010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 26290 - 26655
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 26489  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  26490 tctgaggaagagcatgctgaacatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 26589  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||  |||||| | |||||||||||    
T  26590 aagtgagtttccttggtcatgtgatttctaagggtggcatttctgtggatccatttaaggttgatg 26655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 270; Significance: 1e-151; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 24829749 - 24830114
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 24829948  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| | |||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||||||| ||||||||||||| ||||    
T  24829949 tctgaggaagagcatgcggagcatttgaggattgtgttgcaattcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttcaagg 24830048  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||   |||||||| ||||||||||    
T  24830049 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtagatccttccaaggttgatg 24830114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 11 - 381
Target Start/End: Complemental strand, 22279992 - 22279622
Alignment:
Q  11 tggacatcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagta 110  Q
    |||| |||||||||| ||||| ||| | ||| ||||||||||||| | |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  22279992 tggatatcatcagatcagagtaaagactgaatatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagta 22279893  T
Q  111 tctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtatt 210  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  22279892 tctaatgcgccatgtgtctttatggaatacatgaatagaatattttatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtatt 22279793  T
Q  211 cgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggtt 310  Q
    |||| ||  ||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| |||| ||||||||    
T  22279792 cgaaatcgaaggaggagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaaccagttatgtgcaaagttgtctaagtgtgaattttggtt 22279693  T
Q  311 gaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||||||  |||||| |||||||||||||    
T  22279692 gaaggaagtgagtttccttggtcatgtgatttctaagtgtggtatttctgtggatccgtctaaggttgatg 22279622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 24568229 - 24568594
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||  |||||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||     
T  24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtgttgtttatagattatattttggtgtattcgaag 24568428  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||  ||    
T  24568429 tctgaggaggagcatgttgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttagttgcggg 24568528  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |  |||||| |||| ||||||||    
T  24568529 aagtgagtttccttggtcatgtgatttctaagggtggtatttatgtggatccgtctagggttgatg 24568594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 22760130 - 22760495
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||||||||||  |    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||| ||||||||| ||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||     
T  22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtggtggtgtttatagatgatattttggtgtatttgaaa 22760329  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| || ||||| ||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||| || ||||||||||| |||    
T  22760330 tctgaggaggagcatgctaagcatctgaggattgtgttgcaagttttggaggagaaccagttatgtgctaagttgtctaagtgtaagttttggttgcagg 22760429  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| |||||||||||||| || ||||| ||||||   |||||| || ||||||||||    
T  22760430 aagtgagtttccttggtcatgtgatttttaagggtgatatttccgtggatccgtcgaaggttgatg 22760495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 16 - 355
Target Start/End: Complemental strand, 25130491 - 25130152
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||   ||||||| |||||||||||||||||| ||||||||||||| ||| ||||     
T  25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccgctttgtggtggtgtttatatatgatattttggtatatacgaag 25130292  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||| || ||||| |  ||||||||||||||||  ||| ||||||||||||||  |     
T  25130291 tctgaggaggagcatgctgagcatttgagggttgtgttgcgagtcttaaaggagaatcggttatgtgctaagttgttgaagtgtgagttttggttgcgga 25130192  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtat 355  Q
    |||||||||||  ||||||||||||||||| |||||||||    
T  25130191 aagtgagtttctttggtcatgtgatttctaagggtggtat 25130152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 64 - 340
Target Start/End: Original strand, 10037941 - 10038217
Alignment:
Q  64 gaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctta 163  Q
    ||||||||||||| |||||||| || | | ||||| ||||||| ||  |||||||||  |||||||| |||||||||||||||||||| || ||||||||    
T  10037941 gaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctta 10038040  T
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| |  ||| |||||||||||||||| ||||| ||| |||||||||| || |||||||||||| | |||||| | ||||||||||||||    |||    
T  10038041 tttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattgtgttgcatactttg 10038140  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgat 340  Q
    ||||||||  | || | || ||||||||| ||| ||||||||| ||||  |||||||||||||| ||||||||||||    
T  10038141 aaagagaataagttgtttgataagttgtcaaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtgat 10038217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 64 - 340
Target Start/End: Original strand, 10098326 - 10098602
Alignment:
Q  64 gaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctta 163  Q
    ||||||||||||| |||||||| || | | ||||| ||||||| ||  |||||||||  |||||||| |||||||||||||||||||| || ||||||||    
T  10098326 gaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctta 10098425  T
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| |  ||| |||||||||||||||| ||||| ||| |||||||||| || |||||||||||| | |||||| | ||||||||||||||    |||    
T  10098426 tttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcggagcatctaaggattgtgttgcatactttg 10098525  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgat 340  Q
    ||||||||  | || | || ||||||||  ||| ||||||||| ||||  |||||||||||||| ||||||||||||    
T  10098526 aaagagaataagttgtttgataagttgttaaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtgat 10098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 261 - 381
Target Start/End: Original strand, 12639039 - 12639159
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 360  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||     
T  12639039 ttgaaagagaatcagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 12639138  T
Q  361 gggatccttctaaggttgatg 381  Q
     |||||| |||||||| ||||    
T  12639139 tggatccgtctaaggtcgatg 12639159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 30010841 - 30011054
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    ||||||||||||| || |||||| |||| |||||| | || |||||| ||||| |||| |||||||| || ||||||||||||||||||||| | || ||    
T  30010841 ctaatgcgccaggagtgtttatgaaatatatgaatcgtatttttcatacttatctggatcgttttgttgtcgtgtttatagatgatattttgatatactc 30010940  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     || || |||||||| |||   ||||||||||| ||||| ||||||||  || |||||||  | |||| ||| ||||| || | | | || || ||||||    
T  30010941 caagtccgaggaggaacatgtcgagcatttgagaattgttttgcaagtgctgcaagagaagaagttatatgccaagttatcgatgtgcgaattctggttg 30011040  T
Q  312 aaggaagtgagttt 325  Q
    || |||||||||||    
T  30011041 aacgaagtgagttt 30011054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 265
Target Start/End: Complemental strand, 23112522 - 23112369
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    ||||||||||  |||| |||||||| |||||||||||||| || ||| ||||| |||| |  ||||| || |||||||| |||||||| ||| | |||||    
T  23112522 ctaatgcgcctagtgtgtttatggagtacatgaatagaattttccatgcttatctggatcagtttgtagttgtgtttattgatgatatcttgatttattc 23112423  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||  |||| || |||||| | |||||||| | ||||||||||||||| |||||    
T  23112422 taagactgaagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaa 23112369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 30209574 - 30209787
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||  || || ||||||||||| ||||||   || |||||| ||||| |||| |||||||| || ||||||||||||||||||||| | || ||    
T  30209574 ctaatgcgctgggagtgtttatggaatatatgaatcatatttttcatacttatctggatcgttttgttgttgtgtttatagatgatattttgatatactc 30209673  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     || || |||||||| |||   || |||||||| ||||| || |||||  ||||||||||  | |||| ||| ||||| || ||| | || || ||||||    
T  30209674 caagtccgaggaggaacatgtcgaacatttgagaattgtttttcaagtgctgaaagagaagaagttatctgccaagttatcgaagtgcgaattctggttg 30209773  T
Q  312 aaggaagtgagttt 325  Q
    || |||||||||||    
T  30209774 aacgaagtgagttt 30209787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 325
Target Start/End: Complemental strand, 27373038 - 27372842
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    ||||||||||| |||||| | || || ||| | | |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || |    
T  27373038 tttatggaatatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 27372939  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    || |||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  27372938 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27372842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 344
Target Start/End: Original strand, 24818889 - 24819119
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||| ||| ||||| | || |||||| | ||||| || || ||  |||| ||||| || |||||||||||| | || || |    
T  24818889 aatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactcta 24818988  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  |||| || || ||| ||||||||||||||||||| ||||||||  |||| |||||  |  | | |||||||||||| ||| ||||  | ||||||||    
T  24818989 agactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaa 24819088  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     ||||| ||||| | ||| ||||| ||||||    
T  24819089 tgaagtaagttttcttggccatgttatttct 24819119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 112 - 265
Target Start/End: Complemental strand, 1065537 - 1065384
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| ||||||||| |||| || ||| ||| | ||||    ||||||||||| ||||| |||||||||||  | |||||    
T  1065537 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgtggtggtatttattgatgatattttaatctattc 1065438  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| || ||||||||||| |||||    
T  1065437 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 1065384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 21143769 - 21143930
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    ||||| || |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  21143769 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 21143868  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    | || ||||||||| ||||||| |||||||| ||||||||||| | ||| ||||| ||||||    
T  21143869 ccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 21143930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 24711768 - 24711607
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  24711768 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 24711669  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  24711668 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 24711607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 41607094 - 41607255
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  41607094 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 41607193  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  41607194 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 41607255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 24875527 - 24875639
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | |||    
T  24875527 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttgg 24875626  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  24875627 ccatgttatttct 24875639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 271
Target Start/End: Original strand, 23098675 - 23098834
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| || |||||||| || |||||| ||| | ||||  | || |||||||||||||| |||||||||||  | |||||    
T  23098675 ctaatgcgcctggtgtatttatggagtatatgaataggatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 23098774  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
     ||  |||| || |||||| | |||||| |||||||||| || || ||  ||||||||||    
T  23098775 taagactgaagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaa 23098834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 325
Target Start/End: Complemental strand, 24264094 - 24263943
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| |||||||| || ||||||||| | || || ||  |||| ||||| |||  ||||||| ||| |||||| |||||||| |||||||||||      
T  24264094 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaggaacatgttgagcatctgaagattgttttgcaagtgttgaaagagaaga 24263995  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  24263994 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 24263943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 10870584 - 10870423
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||    
T  10870584 tttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 10870485  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  10870484 aaagagaagaaactttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagttt 10870423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 27219750 - 27219589
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||    
T  27219750 tttggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 27219651  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  27219650 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 27219589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 112 - 344
Target Start/End: Complemental strand, 27789526 - 27789294
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||||||| || | |||||    
T  27789526 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 27789427  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    |||  |||| || |||||| | || ||| |||| |||||| ||||||| |||||||||||  | || | ||| || ||||| ||  ||||||||||| |     
T  27789426 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 27789327  T
Q  312 aaggaagtgagtttccatggtcatgtgatttct 344  Q
    |  ||||||||||||| ||||||| | ||||||    
T  27789326 agtgaagtgagtttccttggtcatattatttct 27789294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 325
Target Start/End: Complemental strand, 23189633 - 23189492
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    ||||||||||| ||||||||| | || || ||  ||||||| || ||| |||||||| ||| |||||| || ||||| |||||||||||  || | | ||    
T  23189633 gtgtttatagacgatattttgatttactccaagactgaggaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 23189534  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||| ||||||||| |||| || ||||||||| |||| |||||    
T  23189533 ctaaattgtctaagtgtga-ttctggttgaagaaagtaagttt 23189492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 270
Target Start/End: Original strand, 27208894 - 27208987
Alignment:
Q  177 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagaga 270  Q
    ||||||||||||||||||||||||||| | ||||| ||  |||| |||| |||| | |||||  ||| ||||||||||||  | ||||||||||    
T  27208894 gtggtggtgtttatagatgatattttgatttattctaagactgaagaggtgcatgcagagcacctgaagattgtgttgcagattttgaaagaga 27208987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 44384347 - 44384440
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  44384347 ctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 44384440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 268
Target Start/End: Complemental strand, 12576139 - 12575983
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||| ||| || | |||||    
T  12576139 ctaacgcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttttggataaattcgtggtggtatttattgatgacattctgatttattc 12576040  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
    |||  |||| || |||||| | || ||| |||| |||||||||||||| ||||||||    
T  12576039 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaaga 12575983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 16927075 - 16926915
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16927075 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 16926976  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    |||| ||||||||| |||| || |||||||| || |||||||||| ||| ||||| |||||    
T  16926975 ctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 16926915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 17000715 - 17000555
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  17000715 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 17000616  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    |||| ||||||||| |||| || |||||||| || |||||||||| ||| ||||| |||||    
T  17000615 ctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 17000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 325
Target Start/End: Original strand, 22323635 - 22323726
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||| ||| |||||| |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  22323635 gagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 22323726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 325
Target Start/End: Complemental strand, 23295659 - 23295508
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| |||||||| ||||| ||  || | ||||| ||  |||| || |||||| | || ||| ||| ||||||||| ||||| |||||||||||      
T  23295659 tttgtggttgtgtttattgatgacatcctgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttacaagttttgaaagagaaaa 23295560  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    | || | |||||||||||| ||| ||||||| ||||| |  |||||||||||    
T  23295559 agttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagttt 23295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 325
Target Start/End: Complemental strand, 9485931 - 9485789
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  9485931 gtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatg 9485832  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||| ||||||||| |||| || |||||||| |||||||||||    
T  9485831 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 9485789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 23278562 - 23278349
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||||| ||||   ||| ||||| || ||||| ||||| ||| || | |||||    
T  23278562 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatctggataatttcgtggttgtttttattgatgacattctgatttattc 23278463  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     ||  |||| || |||||| | || ||| ||| ||||||||||||| | |||||||||||  | || | |||||||||||| ||| | ||||| |||||     
T  23278462 taagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgtcgaagtgcgagttctggtta 23278363  T
Q  312 aaggaagtgagttt 325  Q
    |  |||||||||||    
T  23278362 agtgaagtgagttt 23278349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 24706259 - 24706371
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||  ||||||| |||||||| || || ||||| | |||    
T  24706259 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaaatgtgagttctggttgaaagaggtaagttttcttgg 24706358  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  24706359 ccatgttatttct 24706371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 266; Significance: 1e-148; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 132513 - 132878
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||     
T  132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtggtggtctttatagatgatattttagtgtattcgaag 132712  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    | |||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  132713 tttgaggaagagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 132812  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  132813 aagtgagtttccttggtcatgtgatttctatgggtggtatttctgtggatccttctaaggttgatg 132878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 182 - 381
Target Start/End: Complemental strand, 25942 - 25743
Alignment:
Q  182 ggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgt 281  Q
    |||||| ||||||||||||||||| |||||||| |||||||| || ||| |||||||||||||||||||||||||||  ||||| ||||||||  |||||    
T  25942 ggtgttcatagatgatattttggtatattcgaaatctgaggaagaacatgctgagcatttgaggattgtgttgcaagatttgaaggagaaccagctatgt 25843  T
Q  282 gctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    ||||||||  ||||| |||||||||||||| ||||||| ||||||  ||||||||||||||||| ||||||||||| |  |||||| |||||||||||||    
T  25842 gctaagtttcctaagtgtgagttttggttgcaggaagtaagtttcattggtcatgtgatttctaagggtggtatttatgtggatccgtctaaggttgatg 25743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 26049 - 25938
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||| ||||||||||| ||||||  ||    
T  26049 atcatccgattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaa 25950  T
Q  116 tgcgccaggtgt 127  Q
    ||||||||||||    
T  25949 tgcgccaggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 15291179 - 15291544
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||     
T  15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggaccattttgtggtggtgttcatagatgatattttggtgtattcaaag 15291378  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || || || |||||||||||| ||||||||||||||||||    
T  15291379 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 15291478  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||   |||||||| ||||||||||    
T  15291479 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtagatccttccaaggttgatg 15291544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 42 - 382
Target Start/End: Original strand, 12340912 - 12341252
Alignment:
Q  42 gatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaataca 141  Q
    |||||||||||||||| |||| ||||  || |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| |||||||| |    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
Q  142 tgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcattt 241  Q
    ||||||| ||||| ||||||| | ||||| ||||||||||  | ||||| |||||||| || |||||| |||| || |||||||||||| |||||||| |    
T  12341012 tgaataggatattccatccttttctggactgttttgtggtaatatttatcgatgatatcttcgtgtatacgaagtcagaggaggagcatgctgagcatct 12341111  T
Q  242 gaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatt 341  Q
    ||||||||||||||  |||||||| || ||  | || | | ||||| | || ||  |||||||||||||   |||||| ||||||| ||||||| |||||    
T  12341112 gaggattgtgttgcgtgtcttgaaggaaaagaagttgttttctaagctttcaaattgtgagttttggttacgggaagtaagtttccttggtcatatgatt 12341211  T
Q  342 tctacgggtggtatttctagggatccttctaaggttgatgt 382  Q
    |  | |||||||||| | | |||||| || | |||||||||    
T  12341212 ttgaagggtggtattgcgatggatccatcaatggttgatgt 12341252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 261 - 382
Target Start/End: Complemental strand, 14999321 - 14999200
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 360  Q
    ||||| ||||| || || |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |     
T  14999321 ttgaaggagaatcagttctgtgctaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttttg 14999222  T
Q  361 gggatccttctaaggttgatgt 382  Q
     ||||||||| |||||||||||    
T  14999221 tggatccttccaaggttgatgt 14999200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 9292841 - 9292727
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 360  Q
    ||||| ||||| || |||||||| |||||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||||||     
T  9292841 ttgaaggagaatcagttatgtgcgaagttgtctaagtgtgagttttggttgaaggaaatgactttccttggtcatgtgatttctaagggtggtatttctg 9292742  T
Q  361 gggatccttctaagg 375  Q
     ||||||||| ||||    
T  9292741 tggatccttcaaagg 9292727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 72 - 345
Target Start/End: Complemental strand, 14696308 - 14696035
Alignment:
Q  72 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 171  Q
    |||||||| ||| | |||||  ||||||| ||||| ||  | |||||||||||||| |||||||| ||||||||    || |||||| | ||||||||      
T  14696308 tatggacattattaatattcagtgatgccttttggtgttacaaatgcgccaggtgtgtttatggagtacatgaactctatttttcatgcgtatttggatt 14696209  T
Q  172 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    | || ||||| ||||| || |||||||||||| | || ||||| || || || || ||| |||||||||||| |||||| ||||||||  ||||||||||    
T  14696208 gcttcgtggttgtgttcattgatgatattttgatatactcgaagtccgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaa 14696109  T
Q  272 ccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttcta 345  Q
      | |||| |||||||||||| ||| ||||||| |||||||| || |||||||| | ||| ||||| |||||||    
T  14696108 gaatttatatgctaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttatttcta 14696035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 311
Target Start/End: Original strand, 8322850 - 8323092
Alignment:
Q  69 aggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttgg 168  Q
    ||||||||||||||| | |||||  | ||||| |||||  |  |||||||| |||  || |||||||||||||  ||||  || |||||||| |||| ||    
T  8322850 aggtatggacactataaatattcggtaatgccgtttggtatgactaatgcgtcagacgtatttatggaatacacaaatatgatctttcatccctattcgg 8322949  T
Q  169 accgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
    | |  |||||||||||||| ||||| |||||||||||||||||||| |  |||||||||||| | |||||| |||| ||||| ||| |  ||||||| ||    
T  8322950 atcagtttgtggtggtgttcatagacgatattttggtgtattcgaagttggaggaggagcatgcagagcatctgagaattgtattggagatcttgaagga 8323049  T
Q  269 gaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    |||  |||| | |||||||||||| ||| |||| || ||||||    
T  8323050 gaagaaattgtatgctaagttgtcgaagtgtgatttctggttg 8323092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 14301888 - 14302049
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  14301888 tttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 14301987  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  14301988 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 14302049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 265
Target Start/End: Complemental strand, 8708055 - 8707913
Alignment:
Q  123 ggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgagg 222  Q
    ||||| |||||||| |||||||||||||| || ||| |||||||||| || |||||||| |||||||| ||||| || ||| | ||||| || ||||| |    
T  8708055 ggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagtctgaag 8707956  T
Q  223 aggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
    | |||||| | ||||||| ||   ||||||||||||| |||||    
T  8707955 aagagcatgcagagcattagaaagttgtgttgcaagtgttgaa 8707913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 268
Target Start/End: Complemental strand, 15323372 - 15323216
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| ||||||||||||||||||||||| || ||| ||||| ||||    |||||||| |||||||| ||||||||| |  | |||||    
T  15323372 ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatattgtaatttattc 15323273  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
     ||   ||| || |||||| | |||||| |||  |||||||||||||| ||||||||    
T  15323272 taagagtgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaaga 15323216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 325
Target Start/End: Complemental strand, 40475178 - 40474982
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| || |||||| | || |||||| | | |||||| || |||||||| ||||| || |||||||||||| | || || ||  |||| || || |    
T  40475178 tttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgttcatcgatgatattttgatttactccaagactgaagaagaac 40475079  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    || |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||| ||| |||| || |||||||| |||||||||||    
T  40475078 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagtgagttt 40474982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Original strand, 8051532 - 8051693
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  8051532 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 8051631  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  8051632 aaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 8051693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 23957850 - 23957689
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  23957850 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 23957751  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  23957750 aaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 23957689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 313
Target Start/End: Original strand, 14849225 - 14849424
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | |||||| || || ||||| ||||| || || ||||||||| | || || |    
T  14849225 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 14849324  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    | || || || || |||  ||||||||||| |||||| ||||||||  |||| |||||  | |||| |||||| ||||| ||| |||| || ||||||||    
T  14849325 agtccgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgctaaattgtcaaagtgtgaattctggttgaa 14849424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 3262911 - 3263064
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  3262911 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 3263010  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  3263011 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 3263064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 27713439 - 27713278
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  27713439 tttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 27713340  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  |  | | |||||| ||||||||| |||| || | |||||| |||||||||||    
T  27713339 aaagagaagaagctttatgctaaattgtctaagtgtgaattctagttgaaagaagtgagttt 27713278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 44659983 - 44660136
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| |||||||| ||||||||| |||| || ||| ||| | ||||    ||||| ||||||||||| || ||||||||  | |||||    
T  44659983 ctaacgcgcctggtgtatttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgacgatattttaatctattc 44660082  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| |||||||||||||| |||||    
T  44660083 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaa 44660136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 14682602 - 14682490
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| ||||||||||| | |||    
T  14682602 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttgg 14682503  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  14682502 ccatgttatttct 14682490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 112 - 344
Target Start/End: Original strand, 51604909 - 51605141
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||||||| || | |||||    
T  51604909 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 51605008  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    |||  |||| || |||||| | || ||| |||| |||||| ||||||| |||||||||||  | || | ||| || ||||| ||  ||||||||||| |     
T  51605009 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 51605108  T
Q  312 aaggaagtgagtttccatggtcatgtgatttct 344  Q
    |  ||||||||||||| ||||||| | ||||||    
T  51605109 agtgaagtgagtttccttggtcatattatttct 51605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 343
Target Start/End: Complemental strand, 8388447 - 8388336
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| || ||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| || |||||||||| |||    
T  8388447 ctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaggtgagtttccttgg 8388348  T
Q  332 tcatgtgatttc 343  Q
     ||||| |||||    
T  8388347 ccatgttatttc 8388336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 344
Target Start/End: Original strand, 15145759 - 15145974
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || || ||  |||| || || |    
T  15145759 tttatggagtacatgaatcgtatctttcatgcatttttggatcgattcgtggttgtctttatcgatgatattttgatttactccaagactgaagaagaac 15145858  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || |||||||| |||  ||||| |||||||| ||||||||||   || | | |||||| || |||||| ||||||| |||||||| || || ||||| |     
T  15145859 atgctgagcatctgaacattgtcttgcaagtgttgaaagagaggaaactttatgctaaattatctaagtgtgagttctggttgaaagaggtaagttttct 15145958  T
Q  329 tggtcatgtgatttct 344  Q
    ||| ||||| ||||||    
T  15145959 tggccatgttatttct 15145974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 18547696 - 18547850
Alignment:
Q  72 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 171  Q
    ||||| || |||||||||||  ||| ||| || ||| | ||||| |||||||| || |||||||| || ||||| ||||| || ||||| ||||| || |    
T  18547696 tatggtcattatgagtattcggtgaagcctttcggaatgtctaacgcgccaggagtgtttatggagtatatgaacagaatcttccatccgtatttagatc 18547795  T
Q  172 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggagga 226  Q
      ||||| ||||| || || ||||||||||||||||| || || || ||||||||    
T  18547796 agtttgttgtggtattcattgatgatattttggtgtactctaaatcggaggagga 18547850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 268
Target Start/End: Complemental strand, 15072514 - 15072358
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| |||||||||||| | || ||| ||||| ||||    |||||||| |||||||| ||||||||  |  | |||||    
T  15072514 ctaatgcgcctggtgtgtttatggagtacatgaatagagttttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 15072415  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
     ||   |||  | |||||| | |||||| ||| ||||||||||||||| ||||||||    
T  15072414 taagaatgaataagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaga 15072358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 325
Target Start/End: Complemental strand, 12478633 - 12478542
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  12478633 gagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 12478542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 319
Target Start/End: Original strand, 18225423 - 18225510
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagt 319  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||    
T  18225423 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 18225510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 325
Target Start/End: Original strand, 19776772 - 19776863
Alignment:
Q  234 gagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| |||||||||||    
T  19776772 gagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttt 19776863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 268
Target Start/End: Original strand, 15001482 - 15001638
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| | ||| |||||||| || |||||  |||| || ||| ||||| ||||    |||||||| |||||||| ||||| || ||| | |||||    
T  15001482 ctaatgcgcctgttgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 15001581  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
     ||   ||| || |||||| | || ||| ||||||||||||||||||| ||||||||    
T  15001582 taagattgaagaagagcatgcagaacatctgaggattgtgttgcaagtgttgaaaga 15001638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 264; Significance: 1e-147; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 5830 - 6197
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
Q  116 tgcgccaggtgtctttatggaa-tacatgaata-gaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcga 6029  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||    
T  6030 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 6129  T
Q  314 ggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| |  ||||||||| ||||||||||    
T  6130 ggaagtgagtttccttggtcatgtgatttctaagggtggtatttttgtggatccttccaaggttgatg 6197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 325
Target Start/End: Complemental strand, 14273 - 14173
Alignment:
Q  225 gagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtt 324  Q
    |||||| | |||||| ||| ||||||||||||| | |||||||| ||  | || | |||||||||||| ||| ||||||| ||||| |  ||||||||||    
T  14273 gagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagtt 14174  T
Q  325 t 325  Q
    |    
T  14173 t 14173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 7885 - 8250
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||     
T  7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttttggtggtgtttatagatgatattttagtgtattcgaag 8084  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    || ||||| ||||||  ||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  8085 tcggaggaagagcatgttgagcatctgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtctaagtgtgtgttttggttgaagg 8184  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| |||||||||||||||||  ||||||||| ||  |||||| |||||||||||||    
T  8185 aagtgagtttccttggtcatgtgatttctaatggtggtattgctgtggatccgtctaaggttgatg 8250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 34367 - 34002
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 34168  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||||| |||    
T  34167 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttgtctaagtgtgaattttggttggagg 34068  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||  |||||| |||||||||||||    
T  34067 aagtaagtttccttggtcatgtgatttctaagggtggtatttctgtggatccgtctaaggttgatg 34002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 262; Significance: 1e-146; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 24458 - 24093
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| || ||||||||||||||||||| ||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||| |||||||||| |||| || |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||     
T  24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtatattcgaaa 24259  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||| |||||||||||||| |||    
T  24258 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagttttgaaggggaaccagttatgtgctaagttgtctaagtgtgagttttggttgcagg 24159  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  |||||| |||||||||||||    
T  24158 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccgtctaaggttgatg 24093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 344
Target Start/End: Complemental strand, 8189 - 7974
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||||||||| || || || |||||||||||| | || || |  ||||| || || |    
T  8189 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccatgtctgaagaagaac 8090  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || || ||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||||||| |||| || |||||||| |||||||| || |     
T  8089 atgctaagcatttgaagctagttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 7990  T
Q  329 tggtcatgtgatttct 344  Q
    ||| ||||| ||||||    
T  7989 tggacatgttatttct 7974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 259; Significance: 1e-144; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 16 - 382
Target Start/End: Original strand, 1976 - 2342
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||     
T  2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccattttgtggtggtgttaatagatgatattttggtgtattcaaag 2175  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||    
T  2176 tctgaggaagagcatgctgagcatttgaggattatgttgcaggtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttggagg 2275  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatgt 382  Q
    |||||||||||| |||||||||||||| || ||||||||||| |  |||||| ||||||||||||||    
T  2276 aagtgagtttccttggtcatgtgatttataagggtggtatttatgtggatccgtctaaggttgatgt 2342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 26605 - 26270
Alignment:
Q  20 tcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcg 119  Q
    |||||| |||||||||||||||||||||||||| ||||  ||| |||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  26605 tcagatgagagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcg 26506  T
Q  120 ccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctg 219  Q
    ||||||||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||| |||||||  |||| |||||||||||||||||    |    
T  26505 ccaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtggtgatgtttatttatgacattttggtgtattcgaagatcg 26406  T
Q  220 aggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagt 319  Q
    ||||| |||||  |||||| ||||| |||||||||   ||||||||||| ||  | || |  |||||||| || ||| ||||||||||||||  ||||||    
T  26405 aggagtagcatgttgagca-ttgagaattgtgttgggtgtcttgaaagaaaagaagttgttagctaagttttcgaagtgtgagttttggttgcgggaagt 26307  T
Q  320 gagtttccatggtcatgtgatttctacgggtggtatt 356  Q
    || ||||| ||||||||||||||| |  |||||||||    
T  26306 gactttccttggtcatgtgatttcgaaaggtggtatt 26270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 6953 - 7318
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||| || || || ||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||| |||     
T  7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgttttatggtggtgtttataaatgatattttggtgtatttgaag 7152  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||    
T  7153 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcagg 7252  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||  |||||| |||||||||||||    
T  7253 aagtgagtttccttggtcatatgatttctaagggtggtatttctgtggatccgtctaaggttgatg 7318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 250; Significance: 1e-139; HSPs: 2)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 970 - 1335
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||| ||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||     
T  1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgttttatggtggtgtttatagatgatattttggtgtattcgaag 1169  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||| |||| ||     
T  1170 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtcttgaaggagaaccaattatgtgctaaattgtcgaagtgtgagttttagttgcaga 1269  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| | ||||||||||||||| ||||||||||| |  |||||| || ||||||||||    
T  1270 aagtgagtttcctttgtcatgtgatttctaagggtggtatttttgtggatccgtcgaaggttgatg 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 261 - 381
Target Start/End: Complemental strand, 4571 - 4451
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 360  Q
    ||||| ||||| || || |||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||| ||||| ||||| |     
T  4571 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtgttatttatt 4472  T
Q  361 gggatccttctaaggttgatg 381  Q
     ||||||||||||||||||||    
T  4471 tggatccttctaaggttgatg 4451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 249; Significance: 1e-138; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 376
Target Start/End: Original strand, 8850 - 9210
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||| || || ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8850 atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8949  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||| ||     
T  8950 tgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatcgttttgtgatggtgttcatagatgatattttggtgtattcaaag 9049  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||| |||||| |||||| ||||||||||||||||||    
T  9050 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaactagttatgtgttaagttatctaagtgtgagttttggttgaagg 9149  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggt 376  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||||||||| |||||    
T  9150 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccttccaaggt 9210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 342
Target Start/End: Complemental strand, 40711 - 40588
Alignment:
Q  219 gaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaag 318  Q
    ||||| || ||| |||||||||||| || ||| |||||||| |||||||||||  || | | |||||| || |||||| |||| || |||||||| || |    
T  40711 gaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagagg 40612  T
Q  319 tgagtttccatggtcatgtgattt 342  Q
    ||||||| | ||| ||||| ||||    
T  40611 tgagttttcttggccatgttattt 40588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 342
Target Start/End: Complemental strand, 74431 - 74308
Alignment:
Q  219 gaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaag 318  Q
    ||||| || ||| |||||||||||| || ||| |||||||| |||||||||||  || | | |||||| || |||||| |||| || |||||||| || |    
T  74431 gaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagagg 74332  T
Q  319 tgagtttccatggtcatgtgattt 342  Q
    ||||||| | ||| ||||| ||||    
T  74331 tgagttttcttggccatgttattt 74308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 16 - 358
Target Start/End: Original strand, 827 - 1168
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| ||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||     
T  927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggaccattttgtggtggtgtttatagatgata-tttggtgtattcgaag 1025  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||| ||||||||| |||    
T  1026 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtcgaagtgtgaattttggttgcagg 1125  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttc 358  Q
    |||||||||||| |||||| |||||||| | ||| ||||||||    
T  1126 aagtgagtttccttggtcacgtgatttcgaagggaggtatttc 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 16 - 358
Target Start/End: Complemental strand, 16340 - 15998
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||| |||||| |||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||     
T  16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtggtgatgtttatagatgatattttggtgtattcgaag 16141  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| || | |||| ||||||||| |||    
T  16140 tctgaggaggagcatgttgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtttacgtgtgaattttggttgcagg 16041  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttc 358  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  16040 aagtgagtttccctggtcatgtgatttctaagggtggtatttc 15998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 238; Significance: 1e-131; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 1908 - 2264
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||| ||||| || |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||     
T  2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtggtggtgttcatagatgatattttggtgtattcgaaa 2107  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||          ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||  ||    
T  2108 tctgagga---------cgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttgtctaagtgtgagttttggttgcggg 2198  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  |||||| |||||||||||||    
T  2199 aagtgagtttccttggtcatgtgatttctaagggtggtatttctgtggatccgtctaaggttgatg 2264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 218; Significance: 1e-120; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 31447 - 31811
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| | |||||||||||  |||||| ||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||     
T  31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaag 31646  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    | |||||| |||||| |||||||||||||||||||  ||| | ||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||  ||    
T  31647 tttgaggaagagcatgctgagcatttgaggattgt-atgcgaatcttgaacgagaaccagttatgtgctaagttgtcgaagtgtgagttttggttgcggg 31745  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    |||||||||||| ||||||||||||||||| ||||||||||||   |||||| || ||||||||||    
T  31746 aagtgagtttccttggtcatgtgatttctaagggtggtatttccgtggatccgtcgaaggttgatg 31811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 74 - 381
Target Start/End: Complemental strand, 7438 - 7131
Alignment:
Q  74 tggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgt 173  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| || ||||||| |||||||||||||||| || |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||||| ||| ||||||||||||||||| |||||||| |||||||||||||||  ||||||| |||||||||||||| ||||||| ||||||||||    
T  7338 tttgtggtggagttcatagatgatattttggtatattcgaaatctgaggaggagcatgttgagcatatgaggattgtgttgtaagtcttaaaagagaacc 7239  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaa 373  Q
    | ||||||||||||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||||| |  |||||| |||||    
T  7238 agttatgtgctaagttgtctaagtgtgagttttggttgcaggaagtgagtttcctgggtcatgtgatttctaagggtggtatttatgtggatccgtctaa 7139  T
Q  374 ggttgatg 381  Q
    ||| ||||    
T  7138 ggtcgatg 7131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 16 - 311
Target Start/End: Original strand, 21871 - 22165
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| | |||||||||||  |||||| ||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||     
T  21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaag 22070  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    | |||||| |||||| |||||||||||||||||||  ||| | ||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||    
T  22071 tttgaggaagagcatgctgagcatttgaggattgt-atgcgaatcttgaacgagaaccagttatgtgctaagttgtcgaagtgtgagttttggttg 22165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 352
Target Start/End: Original strand, 7029 - 7361
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    ||||||| |||||||||||||||||||||||||||||||| | ||||  |||||||||||||||||||| ||||||| ||||||||||||||||||| ||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaa 7228  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||||||||||||| ||||||||||     ||||| | | ||||||||| ||||| || ||||||| |||||||||||||  ||||||||||||  |||    
T  7229 tctgaggaggagcatgctgagcattt----tttgtgctacgagtcttgaaggagaatcagttatgtgttaagttgtctaagtttgagttttggttatagg 7324  T
Q  316 aagtgagtttccatggtcatgtgatttctacgggtgg 352  Q
    |||||||||||| ||||||||||||||| | ||||||    
T  7325 aagtgagtttccttggtcatgtgatttcgaagggtgg 7361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 16 - 259
Target Start/End: Original strand, 1645 - 1888
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||| |||| ||||||||| |||||||||||||  | |||||||||||||| || ||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 1844  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagt 259  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  1845 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 1888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 27 - 302
Target Start/End: Complemental strand, 378 - 103
Alignment:
Q  27 agagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtg 126  Q
    ||||||||||||||| |||||||||||| || |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  378 agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 279  T
Q  127 tctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggagga 226  Q
    |||| || || || |||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||    
T  278 tcttcatagagtatatgaatagaatatttcatccttatctgtactgttttgtggtggtgtttatagatgatattttggggtatttgaaatctgaggaaga 179  T
Q  227 gcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgag 302  Q
    |||| ||||||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||| |||||    
T  178 gcatgctgagcatttgaggattatgttgcaagtcttgaaggagaactagttatgtgctaagttgtctaagtgtgag 103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||| |||||||||||||||| ||||||   |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatt 154  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 64 - 340
Target Start/End: Complemental strand, 9129 - 8853
Alignment:
Q  64 gaacgaggtatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctta 163  Q
    ||||||||||||| |||||||| || | | ||||| ||||||| ||  |||||||||  |||||||| |||||||||||||||||||| || ||||||||    
T  9129 gaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatcctta 9030  T
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| |  ||| |||||||||||||||| ||||| ||| |||||||||| || |||||||||||| | |||||| | ||||||||||||||    |||    
T  9029 tttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattgtgttgcatactttg 8930  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgat 340  Q
    ||||||||  | || | || ||||||||| ||| ||||||||| ||||  |||||||||||||| ||||||||||||    
T  8929 aaagagaataagttgtttgataagttgtcaaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtgat 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 239 - 381
Target Start/End: Complemental strand, 2323 - 2181
Alignment:
Q  239 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtg 338  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||     
T  2323 tttgaggattgtgttgcaagccttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagttttcttggtcatgtt 2224  T
Q  339 atttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    ||||||| |||||||||||||  ||||||||||||||||||||    
T  2223 atttctaagggtggtatttctgtggatccttctaaggttgatg 2181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 239 - 381
Target Start/End: Original strand, 25024 - 25166
Alignment:
Q  239 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtg 338  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  25024 tttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgcaaagttatctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtg 25123  T
Q  339 atttctacgggtggtatttctagggatccttctaaggttgatg 381  Q
    ||||||| |||||||||||||  ||||||||||||||||||||    
T  25124 atttctaagggtggtatttctgtggatccttctaaggttgatg 25166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgccatttggagtatctaa 115  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
Q  116 tgcgc 120  Q
    |||||    
T  2121 tgcgc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 260 - 381
Target Start/End: Complemental strand, 212 - 91
Alignment:
Q  260 cttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttct 359  Q
    |||||| ||||| || || ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||| |    
T  212 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaaaggtggtatttat 113  T
Q  360 agggatccttctaaggttgatg 381  Q
      ||||||||||||||||||||    
T  112 gtggatccttctaaggttgatg 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 74; Significance: 7e-34; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 260 - 381
Target Start/End: Original strand, 54210 - 54331
Alignment:
Q  260 cttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttct 359  Q
    |||||| ||||| || || ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||| |    
T  54210 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaatggtggtattttt 54309  T
Q  360 agggatccttctaaggttgatg 381  Q
      ||||||||||||||||||||    
T  54310 gtggatccttctaaggttgatg 54331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 123 - 345
Target Start/End: Original strand, 2636 - 2858
Alignment:
Q  123 ggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgagg 222  Q
    ||||| |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || || || |||||||||||| | || || || |||||||    
T  2636 ggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactccaagtctgagg 2735  T
Q  223 aggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgag 322  Q
    | || ||| |||||||||||| || |   |||||||| |||||||||||  || | | |||||| || || ||| |||| || |||||||| ||  ||||    
T  2736 aagaacatgctgagcatttgaagactagtttgcaagtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaattctggttgaaagagatgag 2835  T
Q  323 tttccatggtcatgtgatttcta 345  Q
    ||| | ||| ||||| |||||||    
T  2836 ttttcttggccatgttatttcta 2858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 271
Target Start/End: Complemental strand, 151279 - 151137
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| ||| |||||||  | || || || ||||| || || |    
T  151279 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgataatattttaatttactccaagtctgaagaagaac 151180  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    || |||||||||||| | | ||||||||||| |||||||||||    
T  151179 atgctgagcatttgaagctggtgttgcaagtgttgaaagagaa 151137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 281 - 382
Target Start/End: Complemental strand, 181941 - 181840
Alignment:
Q  281 tgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgat 380  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |  |||||||||||||||||||    
T  181941 tgctaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtggatccttctaaggttgat 181842  T
Q  381 gt 382  Q
    ||    
T  181841 gt 181840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 345
Target Start/End: Original strand, 24655 - 24886
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| ||||| || |||||||||||| | || ||||    
T  24655 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggaacgtttcgtggttgtgttcatcgatgatattttgatatactcga 24754  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  |||| || || ||| |||||||||||| |||||| |||||||| |||||||||||  | |||| |||||| || || ||| |||| || ||||||||    
T  24755 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgctaaattatcaaagtgtgaattctggttgaa 24854  T
Q  314 ggaagtgagtttccatggtcatgtgatttcta 345  Q
     || || ||||| | ||| ||||| |||||||    
T  24855 agaggtaagttttcttggccatgttatttcta 24886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 261 - 381
Target Start/End: Original strand, 13093 - 13213
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 360  Q
    ||||| ||||| || || |||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||  |||||||||||||     
T  13093 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttcttagggtggtatttctg 13192  T
Q  361 gggatccttctaaggttgatg 381  Q
     ||||||||||||||||||||    
T  13193 tggatccttctaaggttgatg 13213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 379
Target Start/End: Original strand, 10979 - 11097
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttcta 360  Q
    ||||| || ||||| ||||||||||||||||||||| | || ||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||| |     
T  10979 ttgaaggaaaaccagttatgtgctaagttgtctaagtgcgaattttggttgaagggagtgattttccttggtcatgtgatttctaagggtggtatttatg 11078  T
Q  361 gggatccttctaaggttga 379  Q
     ||||||||||||||||||    
T  11079 tggatccttctaaggttga 11097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 112 - 344
Target Start/End: Complemental strand, 3085 - 2853
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    ||||||| || ||||| |||||||||||||||||| | || |||||| |||||||||| ||||| ||||| ||||| || |||||||||||| | || ||    
T  3085 ctaatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttggatcgtttcgtggttgtgttcatcgatgatattttgatataatc 2986  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     || ||||| || || ||| |||| ||||||| |||| | ||||||||  ||||||||||  | |||| |||| | ||||| ||| |||| || ||||||    
T  2985 taagtctgaagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagagaagaagttatatgctcaattgtcaaagtgtgaattctggttg 2886  T
Q  312 aaggaagtgagtttccatggtcatgtgatttct 344  Q
    || || |||||||||| ||| ||| | ||||||    
T  2885 aatgaggtgagtttccgtggccatattatttct 2853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 123 - 343
Target Start/End: Complemental strand, 14643 - 14423
Alignment:
Q  123 ggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgagg 222  Q
    ||||| |||||||||||||||||| |||| |||||| | | |||||| ||||| ||||| ||||| || || ||||||||| | || ||||| || || |    
T  14643 ggtgtgtttatggaatacatgaatcgaatttttcatgcgtttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactcgaagtccgaag 14544  T
Q  223 aggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgag 322  Q
    | |||||| |||||||||||| |||||| ||||||||  ||||||||||  |  ||| | |||| ||||| ||| ||||||| |||||||| || || ||    
T  14543 aagagcatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatattctaaattgtcaaagtgtgagttctggttgaatgaggttag 14444  T
Q  323 tttccatggtcatgtgatttc 343  Q
    ||| | ||| ||||| |||||    
T  14443 ttttcttggccatgttatttc 14423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 72 - 344
Target Start/End: Original strand, 9114 - 9386
Alignment:
Q  72 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 171  Q
    |||||||| ||||| |||||  ||||||| || || ||  | |||||||||||||| |||||||| ||||||||| | || |||||| | ||||| || |    
T  9114 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatc 9213  T
Q  172 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    |||| ||||| ||||| || |||||||||||| | || || || ||||| || || |||  |||||||||||||||||| ||||||||  |||| |||||    
T  9214 gtttcgtggttgtgttcatggatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaggattgttttgcaagtgctgaaggagaa 9313  T
Q  272 ccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
      | |||| ||| ||| |||| ||| |||| || |||||| | || |||||||| | ||| ||||| ||||||    
T  9314 gaagttatatgccaagctgtcaaagtgtgaattctggttggatgaggtgagttttcttggccatgttatttct 9386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 344
Target Start/End: Original strand, 11411 - 11591
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || || |||||||||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  11411 tttggatcggttcgtggtggtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttg 11510  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    ||||||||  |||| | |||||| ||||||||| |||| || |||||||||||||| ||||| | ||| ||||| ||||||    
T  11511 aaagagaagaaattttatgctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttggccatgttatttct 11591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 325
Target Start/End: Complemental strand, 495202 - 494991
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| ||||| || ||||||||| | || |||||| | | |||||| ||||||||||| ||||| || || ||||||||| | || ||||    
T  495202 aatgcgccaggtgtgtttattgagtacatgaatcgtatttttcatgcgtttttggatcgttttgtggttgtgttcatcgacgatattttgatatactcga 495103  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    | ||||| || || ||| ||||| |||||| |||||| ||||||||  ||||||||||  |  ||| |||||| ||||| |||  |||||| ||||||||    
T  495102 agtctgaagaagaacatgctgagtatttgaagattgttttgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtctgagttctggttgaa 495003  T
Q  314 ggaagtgagttt 325  Q
     || ||||||||    
T  495002 tgaggtgagttt 494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 4847 - 4785
Alignment:
Q  38 ggaagatatatccaaaaccgtgttctgaacgaggtatggacactatgagtattctatgatgcc 100  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  4847 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 46682 - 46776
Alignment:
Q  261 ttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtat 355  Q
    ||||| ||||| ||||| |||||||||||||||||| |||| |||||||||  |||||||||||||| ||||||||||||||||| | |||||||    
T  46682 ttgaaggagaatcaattgtgtgctaagttgtctaagtgtgaattttggttgcgggaagtgagtttccttggtcatgtgatttctaagagtggtat 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 344
Target Start/End: Complemental strand, 5295 - 5066
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| || ||| | ||||||||| | || |||||| | |||||||| || |||||||| ||||| || || ||||||||| | || || |    
T  5295 aatgcgccaggtgtgttcatg-agtacatgaatcgtatttttcatgcgtatttggatcgctttgtggttgtgttcattgacgatattttgatatactcca 5197  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  |||| || || ||| |||||||||||| |||||| ||||||||  ||||||||||  | |||| ||| |||||||| ||| ||||||| ||||||||    
T  5196 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgcaaagttgtcaaagtgtgagttctggttgaa 5097  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || |||||||| | ||| ||||| ||||||    
T  5096 tgaggtgagttttcttggccatgttatttct 5066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 81 - 381
Target Start/End: Original strand, 27337 - 27636
Alignment:
Q  81 tatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtgg 180  Q
    ||||| |||||| ||||||| || || ||  |||||||||| || || ||| ||||||| |||||| | || |||||| ||||| | || |||||||| |    
T  27337 tatgaatattctgtgatgcctttcggtgttactaatgcgccgggagtatttgtggaatatatgaatcgtatttttcatacttatctagatcgttttgttg 27436  T
Q  181 tggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatg 280  Q
    | |||||||||||||||||  || | || || || ||||||||||| ||| | ||||||||||| ||||| ||||||||  ||||||||||  | ||||     
T  27437 ttgtgtttatagatgatatcctgatatactctaagtctgaggaggaacatgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttata 27536  T
Q  281 tgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggttgat 380  Q
    ||| ||||| || ||| | || || |||||||| | ||||||||| | ||||||| | ||||||    ||||||||  |  |||||| ||||||||||||    
T  27537 tgccaagttatcaaagtgagaattctggttgaacg-agtgagttttcttggtcatattatttctggtagtggtattgttgtggatccatctaaggttgat 27635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 76571 - 76482
Alignment:
Q  150 atatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcat 239  Q
    ||||| ||||||||| ||||||  ||| |||| ||||||||||| ||||| ||||||||||| || || ||||||||||||  |||||||    
T  76571 atattccatccttatctggaccagtttttggtagtgtttatagacgatatcttggtgtattcaaagtcagaggaggagcatgttgagcat 76482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 129 - 335
Target Start/End: Original strand, 84656 - 84862
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    ||||||||||| |||||| | || |||||| ||||| | || |||||||| || |||||||||||||||||| || | || || ||  |  |||||||||    
T  84656 tttatggaatatatgaatcgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatattatgatatactctaagaccaaggaggagc 84755  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || | ||||||||||| ||||| ||||||||  ||||||||||  | |||| ||| ||||| || ||| | || || ||||||||  ||||||||||||     
T  84756 atgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcaaagtgcgaattctggttgaacaaagtgagtttcct 84855  T
Q  329 tggtcat 335  Q
    |||||||    
T  84856 tggtcat 84862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 325
Target Start/End: Complemental strand, 9072 - 8911
Alignment:
Q  164 tttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttg 263  Q
    |||||| || |||||||| |||||||| |||||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||    
T  9072 tttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttg 8973  T
Q  264 aaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||  || | | |||||| ||||||||| |||| || |||||||| |||||||||||    
T  8972 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 8911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 176464 - 176617
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| |||||||||| || ||||| || || ||||| ||||| || ||| | |||||    
T  176464 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgttgttgtatttattgatgacatcttgatttattc 176563  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     || ||||| || |||||| | |||||||| | |||||||||| |||| |||||    
T  176564 taagtctgaagaagagcatgcagagcatttaaagattgtgttgtaagtgttgaa 176617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 344
Target Start/End: Complemental strand, 3601 - 3386
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||||||||| || || || |||||||||||| | || || || ||||| || || |    
T  3601 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccaactctgaagaagaac 3502  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || |||||||||||| | | || |||||| | |||||||||||  || | | |||||| || |||||| |||| || |||||||| ||||||||||| |     
T  3501 atgctgagcatttgaagctggttttgcaattgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaagtgagttttct 3402  T
Q  329 tggtcatgtgatttct 344  Q
    ||| ||||| ||||||    
T  3401 tggccatgttatttct 3386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 4094 - 3887
Alignment:
Q  118 cgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattc 217  Q
    |||||||||| |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| ||||| || || ||||||||| | || || ||  |    
T  4094 cgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactccaagac 3995  T
Q  218 tgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaa 317  Q
    ||| || || ||| |||||||||||| |||||| ||||||||  ||||||||||  |  ||| |||||| ||||| ||| |||| || |||||||| ||     
T  3994 tgaagaagaacatgctgagcatttgaagattgtattgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtgtgaattctggttgaaagag 3895  T
Q  318 gtgagttt 325  Q
    ||||||||    
T  3894 gtgagttt 3887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 40453 - 40606
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  40453 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 40552  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  40553 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 40606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 265
Target Start/End: Original strand, 201594 - 201741
Alignment:
Q  118 cgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattc 217  Q
    |||| ||||| |||||||| |||||||||||||| || ||| |||||||||| || |||||||| |||||||| |||||||||||| | || || ||  |    
T  201594 cgccgggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgtggttgtgtttattgatgatattttgatatactctaagac 201693  T
Q  218 tgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
    ||| || || ||| | || ||||||| | ||||||||||||| |||||    
T  201694 tgaagaagaacatgcagaacatttgaaggttgtgttgcaagtgttgaa 201741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 268
Target Start/End: Complemental strand, 11012 - 10858
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||| ||||| |||||||| |||||||||||||| || ||| |||||||||| |  ||||| || |||||||| ||||| || ||| | ||||| |    
T  11012 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcaatttgtagttgtgtttattgatgacatcttgatttattcta 10913  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
    |  |||| || |||||| | |||||||| | |||||| |||||||| ||||||||    
T  10912 agactgaagaagagcatacagagcatttaaagattgtattgcaagtgttgaaaga 10858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 344
Target Start/End: Original strand, 7209 - 7439
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    ||||| || ||||| |||||||| ||||||||| |||| |||||| | | |||||| |||||  |||| || || || ||||| |||||||| || || |    
T  7209 aatgcacctggtgtgtttatggagtacatgaatcgaatctttcatgcatttttggatcgtttcatggttgtattcatcgatgacattttggtttactcca 7308  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  |||| || || ||| |||||||||||| || ||| |||||||| |||||||||||  || | | |||||| ||||| ||| |||| || ||||||||    
T  7309 agactgaagaagaacatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaattctggttgaa 7408  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || |||||||| | ||| ||||| ||||||    
T  7409 tgaggtgagttttcttggccatgttatttct 7439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 271
Target Start/End: Complemental strand, 17061 - 16904
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | ||||| || || || ||||| ||||| || || ||||||||| | || || |    
T  17061 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 16962  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    |  |||| || || ||| |||||||||||| |||||| |||||||| |||||||||||    
T  16961 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaa 16904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 344
Target Start/End: Original strand, 1969 - 2201
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| ||||||||| | || |||||| | ||||| || || ||  |||| ||||| || |||||||||||| | || ||    
T  1969 ctaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactc 2068  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     || ||| | || || |||  ||||||||||| |||||| ||||||||  |||| |||||  | |||  ||| |||||||| ||| |||| || ||||||    
T  2069 taagtctcaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttaaatgccaagttgtcaaagtgtgaattctggttg 2168  T
Q  312 aaggaagtgagtttccatggtcatgtgatttct 344  Q
    || || |||||||| | ||||||||| ||||||    
T  2169 aatgaggtgagttttcttggtcatgttatttct 2201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 344
Target Start/End: Original strand, 6014 - 6241
Alignment:
Q  117 gcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaatt 216  Q
    ||||||||||| |||||||| ||||||||| | || || ||| | ||| | || ||||| ||||| ||||| || || ||||||||| | || || ||      
T  6014 gcgccaggtgtgtttatggagtacatgaatcgtattttccatgcatatctagatcgtttcgtggttgtgttcatcgacgatattttgatatactctaagg 6113  T
Q  217 ctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagga 316  Q
    |||| || || ||| ||||||| |||| |||||| ||||||||  ||||||||||  | |||| |||||||||||| ||| |||| || |||||||| ||    
T  6114 ctgaagaagaacatgctgagcaattgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatga 6213  T
Q  317 agtgagtttccatggtcatgtgatttct 344  Q
     || | ||| | ||||||||| ||||||    
T  6214 ggtcatttttcttggtcatgttatttct 6241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 6e-16; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 379
Target Start/End: Complemental strand, 17002 - 16855
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||  ||||||||||||| |||    
T  17002 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgagagaagtgagtttccttgg 16903  T
Q  332 tcatgtgatttctacgggtggtatttctagggatccttctaaggttga 379  Q
     ||||| |||||||  | ||||||| ||  |||||| ||||| |||||    
T  16902 ccatgttatttctagtgatggtattgctgtggatccatctaaagttga 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 104892 - 104958
Alignment:
Q  311 gaaggaagtgagtttccatggtcatgtgatttctacgggtggtatttctagggatccttctaaggtt 377  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||| |  |||||| |||||||||    
T  104892 gaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtggatccgtctaaggtt 104958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 379
Target Start/End: Complemental strand, 10540 - 10393
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| | | |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||  ||||||||||||| |||    
T  10540 ctgagcatctaaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgagagaagtgagtttccttgg 10441  T
Q  332 tcatgtgatttctacgggtggtatttctagggatccttctaaggttga 379  Q
     ||||| |||||||  | ||||||| ||  |||||| ||||| |||||    
T  10440 ccatgttatttctagtgatggtattgctgtggatccatctaaagttga 10393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 48634 - 48847
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  48634 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 48733  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    ||   ||||||| |||||| | || ||| |||||||||| |||||||| |||||||||||  | || | ||| || ||||| ||| | |||||||||||     
T  48734 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 48833  T
Q  312 aaggaagtgagttt 325  Q
    |  |||||||||||    
T  48834 agtgaagtgagttt 48847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 315
Target Start/End: Original strand, 94051 - 94093
Alignment:
Q  273 caattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  94051 caattgtgtgctaagttgtctaagtgtgagttttggttgaagg 94093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 45266 - 45106
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    ||||| || |||||||||||| | || || ||  |||| || || ||| |||| ||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  45266 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgatcatctgaagattgtcttgcaagtattgaaagagaaaaaactttatg 45167  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    | || ||||||||| |||| || |||||||| || |||||||| | ||| ||||| |||||    
T  45166 ccaaattgtctaagtgtgaattctggttgaaagaggtgagttttcttggccatgttatttc 45106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 344
Target Start/End: Original strand, 189 - 419
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    ||||| || ||||| || ||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || || || ||||| |||||| | || || |    
T  189 aatgcacctggtgtgttgatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgttttcattgatgacattttgatttactcca 288  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  ||||||| || ||| |||||||||||| || |||||||||||| |||||||||||  |  | | |||||| ||||| ||| |||| || ||||||||    
T  289 agactgaggaagaacatgctgagcatttgaagactgtgttgcaagtgttgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaa 388  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || |||||||| | ||| ||||| ||||||    
T  389 tgaggtgagttttcttggccatgttatttct 419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 344
Target Start/End: Original strand, 15343 - 15573
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||| |||||||||| ||||||||| | || |||||| | | |||||| ||||| ||| | ||||| || || ||||||||| | || || |    
T  15343 aatgcgccaggtatctttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtgattgtgttcatcgacgatattttgatatactcca 15442  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  |||| || || ||  |||||||||||| |||||| ||||||||  | ||||||||  | |||| |||||| ||||| ||| |||| || | ||||||    
T  15443 agactgaagaagaacaagctgagcatttgaagattgttttgcaagtgctaaaagagaaaaagttatatgctaaattgtcaaagtgtgaattctagttgaa 15542  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || |||||||| | ||| ||||| ||||||    
T  15543 agaggtgagttttcttggccatgtaatttct 15573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 344
Target Start/End: Original strand, 14601 - 14831
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | ||||||  |||| ||||| ||||| || || ||||||||| | || || |    
T  14601 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatagtttcgtggttgtgttcatcgacgatattttgatatactcca 14700  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |   ||| || || |||  ||||||||||| |||||| ||||||||  ||||||||||  | |||| |||||| ||||| ||| |||| || | ||||||    
T  14701 agattgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgaattctagttgaa 14800  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     || |||||||| | ||| ||||| ||||||    
T  14801 agaggtgagttttcttggccatgttatttct 14831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 344
Target Start/End: Original strand, 10863 - 11093
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||| ||| ||||| | || |||||| | ||||| || || ||  |||| ||||| || |||||||||||| | || || |    
T  10863 aatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactcta 10962  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  |||| || || ||| ||||||||||||||||||| ||||||||  |||| |||||  |  | | |||||||||||| ||| ||||  | ||||||||    
T  10963 agactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaa 11062  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     ||||| ||||| | ||| ||||| ||||||    
T  11063 tgaagtaagttttcttggccatgttatttct 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 344
Target Start/End: Original strand, 17055 - 17285
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||| ||| ||||| | || |||||| | ||||| || || ||  |||| ||||| || |||||||||||| | || || |    
T  17055 aatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactcta 17154  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |  |||| || || ||| ||||||||||||||||||| ||||||||  |||| |||||  |  | | |||||||||||| ||| ||||  | ||||||||    
T  17155 agactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaa 17254  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     ||||| ||||| | ||| ||||| ||||||    
T  17255 tgaagtaagttttcttggccatgttatttct 17285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 24542 - 24631
Alignment:
Q  236 gcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    |||||||| |||||| ||||||||  ||||||||||  | |||| |||||||||||| ||  |||| || |||||||| || ||||||||    
T  24542 gcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaaatgtgaattctggttgaatgaggtgagttt 24631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 271
Target Start/End: Complemental strand, 6055 - 5898
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||||||||||||| | ||  ||||  | | ||| || || || ||||| ||||| || |||||||||||| | || ||||    
T  6055 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 5956  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    | || || || || ||| |||||||||||| |||||| || ||||| |||||||||||    
T  5955 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaa 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 271
Target Start/End: Complemental strand, 13185 - 13028
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||||||||| |||||||||||||||||| | ||  ||||  | | ||| || || || ||||| ||||| || |||||||||||| | || ||||    
T  13185 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 13086  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    | || || || || ||| |||||||||||| |||||| || ||||| |||||||||||    
T  13085 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaa 13028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 115172 - 115333
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    ||||| || |||||||||||| | || || || ||||| || || ||| |||||||||||| |||||| ||||||||  |||| |||||  | |||| ||    
T  115172 gtgttcatcgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagtagttatatg 115271  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    | |||||||| ||| |||| ||||||||||| || |||||||| | ||| ||||| ||||||    
T  115272 ccaagttgtcaaagtgtgaattttggttgaaagaggtgagttttcttggccatgttatttct 115333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 112 - 325
Target Start/End: Complemental strand, 114745 - 114532
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| || |||||||| ||||||||||| |||||| ||||  ||||    |||||||| || || || ||||| |||||| | |||||    
T  114745 ctaatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 114646  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     |   ||||||| |||||| | || ||| ||| |||||| |||||||| |||||||||||  |||| | ||| || ||||| ||| | ||||| |||||     
T  114645 aagaactgaggaagagcatgcagaacatctgatgattgtattgcaagtattgaaagagaagaaattgtatgccaaattgtcgaagtgcgagttctggtta 114546  T
Q  312 aaggaagtgagttt 325  Q
    || |||||||||||    
T  114545 aatgaagtgagttt 114532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 108041 - 108163
Alignment:
Q  222 gaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtga 321  Q
    ||||| ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| |||| || |||||||| || || |    
T  108041 gaggaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaggtaa 108140  T
Q  322 gtttccatggtcatgtgatttct 344  Q
    |||| | ||| ||||| ||||||    
T  108141 gttttcttggccatgttatttct 108163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 344
Target Start/End: Original strand, 121 - 353
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| || ||||| || ||||||||||| |||||| ||||| ||||    |||||||| ||||  || ||||| |||||| | |||||    
T  121 ctaatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctggataaatttgtggtagtgtacattgatgacattttgatctattc 220  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
    ||   | ||||| |||||| | || ||| |||| |||||||||||||| |||||||||||  | || | ||| || ||||| ||| ||||||| |||||     
T  221 gacaacggaggaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 320  T
Q  312 aaggaagtgagtttccatggtcatgtgatttct 344  Q
    |  ||||| ||||||| ||| ||| | ||||||    
T  321 agtgaagtaagtttccttggccatattatttct 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 268
Target Start/End: Original strand, 5209 - 5365
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||| ||||    |||||||| |||||||| ||||||||  |  | |||||    
T  5209 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 5308  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
     ||   ||| || |||||| | |||||| ||| ||||||||||||||| ||||||||    
T  5309 taagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaga 5365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 9432 - 9320
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || ||||||||| ||||||| |||||||| ||||||||||| | |||    
T  9432 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttgg 9333  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  9332 ccatgttatttct 9320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 268
Target Start/End: Complemental strand, 8541 - 8402
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || ||||| |||||||||||| | || || || ||| |||| || |    
T  8541 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgtttttatcgatgatattttgatttactccaagtctaaggaagaac 8442  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaaga 268  Q
    ||||||||||||||| | | || |||||||| ||||||||    
T  8441 attctgagcatttgaagctggttttgcaagtgttgaaaga 8402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 325
Target Start/End: Original strand, 31501 - 31652
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    ||||||||||||||||| ||||||||| || | ||||| ||  |||| ||||||||| | |||||| ||| |||| | ||||||||||||||||| ||      
T  31501 tttgtggtggtgtttattgatgatattctgatttattctaagactgaagaggagcatgcagagcatctgaagattatattgcaagtcttgaaagaaaaga 31600  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    | || | ||| ||| |||| ||| ||||||| ||||| |  |||||||||||    
T  31601 agttgtatgcaaagctgtcaaagtgtgagttctggttaagtgaagtgagttt 31652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 344
Target Start/End: Original strand, 38085 - 38300
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||| ||||| || || || |||||||||||| | || |  || ||||| || || |    
T  38085 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgttttcattgatgatattttgatttactacaagtctgaagaagaac 38184  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || |||||||||||| | | || |||||||| |||||||||||  |  | | |||||| ||||||||| |||| || |||||||| |||||||| || |     
T  38185 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 38284  T
Q  329 tggtcatgtgatttct 344  Q
    ||| ||||| ||||||    
T  38285 tggacatgttatttct 38300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 271
Target Start/End: Complemental strand, 103459 - 103260
Alignment:
Q  72 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 171  Q
    ||||||||||||||||||    ||||||| || || ||  | |||||||||||||| |||||||| | ||||||| | || |||||| | | |||||| |    
T  103459 tatggacactatgagtataaagtgatgcctttcggtgttgcaaatgcgccaggtgtgtttatggagtgcatgaatcgcatttttcatgcatttttggatc 103360  T
Q  172 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    |||| ||||| || || || |||||||||||| | || || || |||||||| || ||| | || ||||||| || ||| ||||||||  ||||||||||    
T  103359 gtttcgtggtagtattcatcgatgatattttgatttactccaagtctgaggaagaacatgccgaacatttgaagactgttttgcaagtgctgaaagagaa 103260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  16 atcatcagattagagtgaaggcggaagatatatccaaaaccgtgttctgaacgaggtat 74  Q
    |||||||||||| |||||||||  |||||||||||||||||| |||| |||||||||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 114 - 344
Target Start/End: Complemental strand, 950 - 720
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    |||||||| || || |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || |  |    
T  950 aatgcgcctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgatgatattttgatttacttca 851  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    | ||||| || || ||| |||||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||||||| |||| || ||||||||    
T  850 agtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaacctttatgcgaaattgtctaagggtgaattctggttgaa 751  T
Q  314 ggaagtgagtttccatggtcatgtgatttct 344  Q
     |||||||| || | ||| ||||| ||||||    
T  750 agaagtgagctttcttggacatgttatttct 720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 342
Target Start/End: Complemental strand, 22887 - 22661
Alignment:
Q  116 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaat 215  Q
    |||||||||||| |||||||| ||||||||| | || |||||| | |||||||| |  || ||||| ||||| ||  ||||||||||| | || || ||     
T  22887 tgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatcacttcgtggttgtgttcatcaatgatattttgatatactctaag 22788  T
Q  216 tctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaagg 315  Q
    ||||| || || ||  |||||||||||| |||||| ||||||||   ||| || ||  | |||| ||| |||||||| ||| ||||||| |||||||| |    
T  22787 tctgaagaagaacacactgagcatttgaagattgttttgcaagtgccgaaggaaaagaagttatatgccaagttgtcaaagtgtgagttctggttgaatg 22688  T
Q  316 aagtgagtttccatggtcatgtgattt 342  Q
    | || ||||| | ||| ||||| ||||    
T  22687 aggtaagttttcttggccatgttattt 22661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 38060 - 38172
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| ||||||| |||||||| || || ||||| | |||    
T  38060 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggtaagttttcttgg 38159  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  38160 ccatgttatttct 38172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 344
Target Start/End: Original strand, 195661 - 195839
Alignment:
Q  166 tggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
    |||| ||||||||||| || ||||| |||||||||||| | || || || ||||| || || ||| |||||||| ||| | |||| |||||||| |||||    
T  195661 tggatcgttttgtggttgtctttatcgatgatattttgatttactccaagtctgaagaagaacatgctgagcatctgaaggttgtcttgcaagtgttgaa 195760  T
Q  266 agagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    ||||||  || | | ||||||  | |||||| ||||||| |||||||| || || ||||| | ||| ||||| ||||||    
T  195761 agagaagaaactttatgctaaactatctaagtgtgagttctggttgaaagaggtaagttttcttggccatgtcatttct 195839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 25234 - 25141
Alignment:
Q  177 gtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagaga 270  Q
    |||||||| |||||||||||||||||| | ||||| ||  |||| ||||||||| | ||||| |||| ||||||||||||  | ||||||||||    
T  25234 gtggtggtatttatagatgatattttgatttattctaagactgaagaggagcatgcagagcacttgaagattgtgttgcagattttgaaagaga 25141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 321
Target Start/End: Complemental strand, 1183 - 974
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| || || ||||||||||| |||||| | || |||||| |||||||||| |  ||||| || |||||||||||||||||| || | || ||    
T  1183 ctaacgcgccgggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatcagtttgttgttgtgtttatagatgatattatgatatactc 1084  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     ||  | || ||||| ||| | ||||||||||| ||||| ||||||||  |||| |||||  | |||| ||| || || || ||| |||| || ||||||    
T  1083 taagaccgaagaggaacatgcggagcatttgagaattgttttgcaagtactgaaggagaagaagttatatgccaaattatcgaagtgtgaattctggttg 984  T
Q  312 aaggaagtga 321  Q
    || |||||||    
T  983 aacgaagtga 974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 40268 - 40107
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| ||||| |||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  40268 gtgtttatcgatgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 40169  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
    |||| ||||||||| |||| || |||||||| ||||| ||||| | ||| ||||| ||||||    
T  40168 ctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttggccatgttatttct 40107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 14365 - 14477
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| |||| || || ||||||||||| ||||| | |||    
T  14365 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattttctaagtgtgaattctgtttgaaggaagtaagttttcttgg 14464  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  14465 ccatgttatttct 14477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 24338 - 24202
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| |||||||| ||||||||| || | ||||| ||  |||| ||||||||| | || ||| ||| ||||||||||||||| || ||||| ||      
T  24338 tttgtggttgtgtttattgatgatattctgatttattctaagactgaagaggagcatgcagaacatctgaagattgtgttgcaagtattaaaagaaaaga 24239  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggtt 310  Q
    | || | |||||||||||| ||| ||||||| |||||    
T  24238 agttgtatgctaagttgtcgaagtgtgagttctggtt 24202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 344
Target Start/End: Original strand, 946 - 1161
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| |  |||||||| || || ||||||| ||||||| | || || || ||||| || || |    
T  946 tttatggagtacatgaatcgcatctttcatgcatttttggatcagtttgtggttgttttcatagatggtattttgatttactccaagtctgaagaagaac 1045  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    || |||||||||||| | | || |||||||| |||||||||||  |  | | |||||| || |||||| |||| || |||||||| || |||||||| |     
T  1046 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattatctaagtgtgaattctggttgaaagaggtgagttttct 1145  T
Q  329 tggtcatgtgatttct 344  Q
    ||| ||||| ||||||    
T  1146 tggacatgttatttct 1161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 271
Target Start/End: Original strand, 6468 - 6610
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || || || ||||| || || |    
T  6468 tttatggagtacatgaatcgcatctttcatgcgtttttggatcggttcgtggttgtttttatcgatgatattttgatttactccaagtctgaagaagaac 6567  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    || |||||||||||| | | || |||||||| |||||||||||    
T  6568 atgctgagcatttgaagctggttttgcaagtgttgaaagagaa 6610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 313
Target Start/End: Original strand, 16058 - 16298
Alignment:
Q  72 tatggacactatgagtattctatgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggacc 171  Q
    |||||||| |||||||||||  ||||||| || || ||  | || ||||||||||| |||||| | ||||||||| | || |||||| | ||| | || |    
T  16058 tatggacattatgagtattcagtgatgcctttgggtgttacaaacgcgccaggtgtgtttatgtagtacatgaatcgcatttttcatgcgtatctagatc 16157  T
Q  172 gttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    |||| |||||  | || || |||||||||||| | || || ||  |||| |||||  || |||||||||||| |||| | |||||||| || || |||||    
T  16158 gtttcgtggttatattcatcgatgatattttgatatactctaagactgaagaggaatatgctgagcatttgaagatt-ttttgcaagtgttcaaggagaa 16256  T
Q  272 ccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
      | |||| |||||||||||| ||| |||| || ||||||||    
T  16257 gaagttatatgctaagttgtcaaagtgtgaattctggttgaa 16298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 271
Target Start/End: Complemental strand, 16825 - 16668
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    ||||| ||||| || |||||||| ||||||||| | || |||||| |   |||||| || || |||||||| ||||| |||||||||||| | || || |    
T  16825 aatgcaccaggagtatttatggagtacatgaatcgcatctttcatgcacttttggatcggttcgtggtggtttttatcgatgatattttgatttactcca 16726  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    | ||||| || || ||| |||||||||||| | | || ||| |||| |||||||||||    
T  16725 agtctgaagaagaacatgctgagcatttgaagctggttttgtaagtgttgaaagagaa 16668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 9682 - 9775
Alignment:
Q  217 ctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggtt 310  Q
    |||| ||||||||| | || ||||||| ||||||||||||| | |||||||||||  | || | |||||||||||| ||| ||||||| |||||    
T  9682 ctgaagaggagcatacagaacatttgaagattgtgttgcaaattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtt 9775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 19896 - 19989
Alignment:
Q  217 ctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggtt 310  Q
    |||| ||||||||| | || ||||||| ||||||||||||| | |||||||||||  | || | |||||||||||| ||| ||||||| |||||    
T  19896 ctgaagaggagcatacagaacatttgaagattgtgttgcaaattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtt 19989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 322
Target Start/End: Complemental strand, 20407 - 20214
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| |||||||||   || |||||| | | |||||| || || ||||| || ||||| |||||||||||| | || || ||  |||| || || |    
T  20407 tttatggagtacatgaatcatatctttcatgcatttttggatcggttcgtggttgtttttattgatgatattttgatttactccaagactgaagaagaac 20308  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgag 322  Q
    || |||||||||||| | | || |||||||| |||||||||||  || | | |||||| ||||||||| |||| || |||||||| ||| ||||    
T  20307 atgctgagcatttgaagttggttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaattgag 20214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 265
Target Start/End: Original strand, 14833 - 14986
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| ||||| ||||| |||||||| |||||||||  ||| || ||| ||| | ||||    ||||| ||||||||||| |||||||||||  | |||||    
T  14833 ctaacgcgcctggtgtttttatggagtacatgaatctaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 14932  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaa 265  Q
     ||   ||||||||||||| | |||||| |||| ||||| |||||||| |||||    
T  14933 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaa 14986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 325
Target Start/End: Complemental strand, 3750 - 3554
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||| ||||| | || |||||| | | |||||| ||||| ||||| || || || ||||| |||||| | || || ||  ||||||| || |    
T  3750 tttatggagtacgtgaatcgcatttttcatgcatttttggatcgtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaac 3651  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    || |||||||||||| || ||| ||| |||| |||||||||||  | || | |||||| ||||| ||| |||| || |||||||| || ||||||||    
T  3650 atgctgagcatttgaagactgttttggaagtgttgaaagagaaaaagttttatgctaaattgtcaaagtgtgaattatggttgaaagaggtgagttt 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 43041 - 42905
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| |||||||| ||||||||| || | ||||| ||  |||| || |||||| | || ||| |||  |||||||||||| | |||||||||||      
T  43041 tttgtggttgtgtttattgatgatattctgatctattcaaagactgaagaagagcatgcagaacatctgaaaattgtgttgcaaatattgaaagagaaga 42942  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggtt 310  Q
    | || | |||||||||||| ||| ||||||| |||||    
T  42941 agttgtatgctaagttgtcgaagtgtgagttctggtt 42905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 16273 - 16113
Alignment:
Q  183 gtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtg 282  Q
    |||||||| || ||||||||| | || || ||  |||| || || ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  16273 gtgtttattgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaaatttatg 16174  T
Q  283 ctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttc 343  Q
    |||| ||||||||| |||| || |||||||| ||| | ||||| | ||| ||||| |||||    
T  16173 ctaacttgtctaagtgtgaattctggttgaaagaattaagttttcttggccatgttatttc 16113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 344
Target Start/End: Complemental strand, 7390 - 7175
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | ||| || || || ||||| || ||||| |||||||||||| | || || ||  | ||||| || |    
T  7390 tttatggagtacatgaatcgtatctttcatgcatttttagatcggttcgtggttgtttttattgatgatattttgatttactccaagaccgaggaagaac 7291  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttcca 328  Q
    ||  ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||||||| |||| || ||||| || ||||||||||| |     
T  7290 atgttgagcatttgaagttggttttgcaagtgttgaaagagaagaaactttatgcgaaattgtctaagtgtgaattctggttaaaagaagtgagttttct 7191  T
Q  329 tggtcatgtgatttct 344  Q
    ||| ||||| ||||||    
T  7190 tggacatgttatttct 7175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 325
Target Start/End: Complemental strand, 53169 - 53018
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 273  Q
    |||||||| || ||||| ||||||||| || | ||||| ||  |||| || |||||| | || ||| ||| ||||||||||||| | |||||||||||      
T  53169 tttgtggttgtatttattgatgatattctgatttattctaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaa 53070  T
Q  274 aattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    | || | || ||||||||| ||| ||||||| ||||| |  |||||||||||    
T  53069 agttgtatgttaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 53018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 42227 - 42374
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||| |||| ||| || ||||||||||| ||||||   || |||||| |||||||||| || |||||  | |||||||||||||||||| || | || ||    
T  42227 ctaacgcgcaaggagtgtttatggaatatatgaatcatatttttcatgcttatttggatcgatttgtttttgtgtttatagatgatattctgatatactc 42326  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagt 259  Q
     ||  | |||||||| ||| | |||||||||||  |||| ||||||||    
T  42327 caagaccgaggaggaacatgccgagcatttgagatttgttttgcaagt 42374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 325
Target Start/End: Original strand, 217542 - 217753
Alignment:
Q  114 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 213  Q
    ||||| |||||||| |||||||| |||||||||   || |||||| | | ||| || ||||| ||||| ||| | || |||||||||||| | || ||||    
T  217542 aatgccccaggtgtgtttatggagtacatgaatcatatttttcatgcgttttttgatcgtttcgtggttgtgatcattgatgatattttgatatactcga 217641  T
Q  214 attctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    | |  || || || |||  ||||||||||| |||||| ||||||||  ||||||||||  |  ||| || ||| ||||| ||| ||||||| | ||||||    
T  217642 agttcgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatatgttaaattgtcaaagtgtgagttctagttgaa 217741  T
Q  314 ggaagtgagttt 325  Q
     || ||||||||    
T  217742 tgaggtgagttt 217753  T

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Target: scaffold0501 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 342
Target Start/End: Complemental strand, 4260 - 4150
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| ||||||| |||||||| || || ||||| | |||    
T  4260 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggtaagttttcttgg 4161  T
Q  332 tcatgtgattt 342  Q
     ||||| ||||    
T  4160 ccatgttattt 4150  T

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Target: scaffold0149 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 5532 - 5629
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    |||||||| |||||||| ||||| || ||| | ||||| ||  |||| || |||||| | || ||| ||| ||||||||||||||| |||||||||||    
T  5532 tttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaagtgttgaaagagaa 5629  T

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Target: scaffold0149; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 9963 - 10060
Alignment:
Q  174 tttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaa 271  Q
    |||||||| |||||||| ||||| || ||| | ||||| ||  |||| || |||||| | || ||| ||| ||||||||||||||| |||||||||||    
T  9963 tttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaagtgttgaaagagaa 10060  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 35562 - 35481
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| ||||||| ||||||||    
T  35562 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaa 35481  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 3186 - 3271
Alignment:
Q  225 gagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggtt 310  Q
    |||||| | |||||| ||| |||||| |||||||| |||||||||||  | || | |||||||||||| ||| ||||||| |||||    
T  3186 gagcatgcagagcatctgaagattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtt 3271  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 325
Target Start/End: Original strand, 99682 - 99895
Alignment:
Q  112 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattc 211  Q
    |||||||||| ||||| || ||||| || |||||| |||| || ||| | ||| ||||    |||||||| |||||||| ||||| ||| || | |||||    
T  99682 ctaatgcgcctggtgtgttcatggagtatatgaatcgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacattctgatctattc 99781  T
Q  212 gaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttg 311  Q
     |   |||| || |||||| | || ||| ||| ||||||||||||| |  | ||||||||  | |||| |||||||||||| ||| ||||||| |||||     
T  99782 tagaactgaagaagagcatgcagaacatctgaagattgtgttgcaaattctaaaagagaaaaagttatatgctaagttgtcgaagtgtgagttctggtta 99881  T
Q  312 aaggaagtgagttt 325  Q
    |  |||||||||||    
T  99882 agtgaagtgagttt 99895  T

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Target: scaffold0676 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 8095 - 7999
Alignment:
Q  217 ctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaa 313  Q
    |||||||||| ||| |||| ||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||  ||||||| ||||||||    
T  8095 ctgaggaggaacatgctgaacatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaaatgtgagttctggttgaa 7999  T

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Target: scaffold0333 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 344
Target Start/End: Complemental strand, 17720 - 17608
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||||||| | | || |||||||| |||||||||||  |  | | |||||| || |||||| |||| || |||||||| ||||||||||| | |||    
T  17720 ctgagcatttgaagctggttttgcaagtgttgaaagagaagaatctttatgctaaattatctaagtgtgaattctggttgaaagaagtgagttttcttgg 17621  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  17620 ccatgttatttct 17608  T

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Target: scaffold0256 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 23314 - 23426
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| || ||||| |||||||||||  || | | ||| ||  |||||||| |||| || |||||||| ||||||||||| | |||    
T  23314 ctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaactgtctaagtgtgaattctggttgaaagaagtgagttttcttgg 23413  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  23414 ccatgttatttct 23426  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 325
Target Start/End: Original strand, 25082 - 25278
Alignment:
Q  129 tttatggaatacatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaattctgaggaggagc 228  Q
    |||||||| ||||||||| | || |||||| | | |||||| ||||| |||||  | ||||| || ||||||||| | || || ||   |||||| || |    
T  25082 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttctttttattgacgatattttgatttactccaagattgaggaagaac 25181  T
Q  229 attctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    || |||||||||||| | | || |||||||| |||||||| ||  || | | |||||| || |||||| |||| || |||||||| ||| |||||||    
T  25182 atgctgagcatttgaagctggttttgcaagtgttgaaagataagaaactttatgctaaattatctaagtgtgaattctggttgaaagaattgagttt 25278  T

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Target: scaffold0239 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 344
Target Start/End: Original strand, 10974 - 11138
Alignment:
Q  180 gtggtgtttatagatgatattttggtgtattcgaattctgaggaggagcattctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattat 279  Q
    ||||| ||||| |||||||||||  | ||||| ||  |||| ||||||||| | || ||| |||||||||| |||||||| || ||||||||  | || |    
T  10974 gtggtatttattgatgatattttaatttattctaagactgaagaggagcatgcagaacatctgaggattgtattgcaagtatttaaagagaagaagttgt 11073  T
Q  280 gtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatggtcatgtgatttct 344  Q
     ||| || ||||| ||  ||||||||||| | |  ||||| ||||||| ||||||| | ||||||    
T  11074 atgccaaattgtcaaaatgtgagttttggctaagtgaagtaagtttccttggtcatattatttct 11138  T

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Target: scaffold0222 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 9114 - 9034
Alignment:
Q  245 gattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagttt 325  Q
    ||||||||| ||||| |||||||||||  | || |||||||||||||| ||| ||||||| | ||| |  |||||||||||    
T  9114 gattgtgttacaagttttgaaagagaaaaagttgtgtgctaagttgtcgaagtgtgagttctagttaagtgaagtgagttt 9034  T

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Target: scaffold0215 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 28811 - 28923
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||||| |||||||||||  || | | |||||| || |||||| || |||| |||||||| || || ||||| | |||    
T  28811 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtaagttatggttgaaagaggtaagttttcttgg 28910  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  28911 ccatgttatttct 28923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 44883 - 44995
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||||| |||||| | |||||||||||  || | | ||| || ||||||||| |||| || |||||||| || |||||||| | |||    
T  44883 ctgagcatctgaagattgtcttgcaaatgttgaaagagaagaaactttatgccaaattgtctaagtgtgacttctggttgaaagaggtgagttttcttgg 44982  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  44983 ccatgttatttct 44995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 344
Target Start/End: Original strand, 3593 - 3705
Alignment:
Q  232 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagcgtgagttttggttgaaggaagtgagtttccatgg 331  Q
    |||||||| ||| |||| | |||||||| |||||||||||  || | | |||||| || |||||| ||||||| |||||||| || || ||||| | |||    
T  3593 ctgagcatctgaagattatcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggtaagttttcttgg 3692  T
Q  332 tcatgtgatttct 344  Q
     ||||| ||||||    
T  3693 ccatgttatttct 3705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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