View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6872A_low_100 (Length: 300)
Name: NF6872A_low_100
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6872A_low_100 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 41923225 - 41922969
Alignment:
| Q |
18 |
caagaaccacctattttagagtttgatggacgtacgtttgtgatgatgattcaaaatttgtaaaatacccatctaacggacatcaacaaagactaatacg |
117 |
Q |
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| T |
41923225 |
caagaaccacctattttagagtttgatggacgtacgtttgtgatgatgattcaaaatttgtaaaatacccatctaacggacatcaacaaggactaatacg |
41923126 |
T |
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| Q |
118 |
aagttgacaataatatcaattttatttcataagtgagtagccgatgaatactttgcttcccgtgaatatccattgtaatctctactcttaatcctccccg |
217 |
Q |
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| T |
41923125 |
aagttgacaataatatcaattttatttcataagtgagtagccgatgaatactttgcttcccgtgaatatccattgtaatctctactcttaattctccccg |
41923026 |
T |
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| Q |
218 |
tctccatccctgtcattcttcaacttgttctctctggaatgagacatctctctctct |
274 |
Q |
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| T |
41923025 |
tctccatccctgtcatttttcaacttgttctctctgaaatgagacatctctctctct |
41922969 |
T |
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