View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6872A_low_137 (Length: 276)
Name: NF6872A_low_137
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6872A_low_137 |
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Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 18 - 264
Target Start/End: Complemental strand, 26505547 - 26505301
Alignment:
| Q |
18 |
caataatgtgatgtgttgttacttttgcgtgaggcaacaaacttaggtttaacaaattcgtacgatatatacgatcttacgtcctctgccagcgtctcta |
117 |
Q |
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| T |
26505547 |
caataatgtgatgtgttgttacttttgcgtgaggcaacaaacttaggtttaacaaattcgtacgatatatacgatcttacgtcctctgccagcgtctctg |
26505448 |
T |
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| Q |
118 |
taccactatactatacttgtaggacccaccaccacgtatggctgaattgccaagccaaagtcttatgcatggctgaattttcttccatgtacagtgaagc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26505447 |
taccactatactatacttgtaggacccaccaccacgtatggctgaattgccaagccaaagtcttatgcatggctgaattttcttccatgtacagtgaagc |
26505348 |
T |
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| Q |
218 |
ttttgtgtaacttgaggtgcagagacacaacttgtggtgctgatatt |
264 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26505347 |
ttttgtgtaacttgaggtgcagagacacaacttgtggtgctgatatt |
26505301 |
T |
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