View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6872A_low_15 (Length: 443)

Name: NF6872A_low_15
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6872A_low_15
NF6872A_low_15
[»] chr4 (5 HSPs)
chr4 (219-437)||(9944166-9944384)
chr4 (305-411)||(19695118-19695224)
chr4 (305-411)||(19705703-19705809)
chr4 (24-143)||(19695388-19695507)
chr4 (24-143)||(19705973-19706092)
[»] chr8 (4 HSPs)
chr8 (311-416)||(29921634-29921739)
chr8 (52-411)||(3343149-3343510)
chr8 (1-142)||(29921336-29921477)
chr8 (325-379)||(26358571-26358625)
[»] scaffold1171 (1 HSPs)
scaffold1171 (305-411)||(134-240)
[»] scaffold0250 (2 HSPs)
scaffold0250 (311-411)||(25201-25301)
scaffold0250 (52-143)||(24940-25031)
[»] chr2 (3 HSPs)
chr2 (311-411)||(17099120-17099220)
chr2 (52-143)||(17099390-17099481)
chr2 (55-143)||(26071919-26072007)
[»] chr1 (2 HSPs)
chr1 (311-411)||(20590372-20590472)
chr1 (31-143)||(20590090-20590202)
[»] chr3 (3 HSPs)
chr3 (215-411)||(11332537-11332735)
chr3 (311-411)||(14767073-14767173)
chr3 (31-143)||(14767343-14767455)
[»] scaffold0008 (1 HSPs)
scaffold0008 (325-390)||(271654-271719)
[»] chr5 (2 HSPs)
chr5 (325-390)||(180543-180608)
chr5 (55-143)||(180792-180880)
[»] chr6 (2 HSPs)
chr6 (325-383)||(20895060-20895118)
chr6 (55-143)||(20894788-20894876)


Alignment Details
Target: chr4 (Bit Score: 167; Significance: 3e-89; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 219 - 437
Target Start/End: Complemental strand, 9944384 - 9944166
Alignment:
Q  219 aaattccctcttgcatgcattaaagcatacatatcctttcaaacactggccctgcatctccaactgcacatttaatcctatcagtgctacctggattact 318  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||| | |||| |    
T  9944384 aaatgccctcttgcatgcattaaagcatacatatcctttcaaacactggtcctgcatctccaactgcacatttaatcctaacaatgctacccgaattaat 9944285  T
Q  319 cctcatcaattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttagccctataaatctta 418  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  9944284 cctcatcaattcctcaacataatttctaagatgagaatatttctcatctattccaccatgaatcagttccgaagccttattcttagccctacaaagctta 9944185  T
Q  419 atgtgactcaacataactc 437  Q
    | |||||||||||||||||    
T  9944184 aagtgactcaacataactc 9944166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 411
Target Start/End: Complemental strand, 19695224 - 19695118
Alignment:
Q  305 ctacctggattactcctcatcaattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttag 404  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||  ||||  | |||||| ||||||||  ||||||| || ||||| |||||||| |||||||    
T  19695224 ctaccaggattgctcctcaacaattcctcagcatagtttcacagatatgcatattgttcatctatggcaccatggataagttctaaagccttcttcttag 19695125  T
Q  405 ccctata 411  Q
    |||||||    
T  19695124 ccctata 19695118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 411
Target Start/End: Complemental strand, 19705809 - 19705703
Alignment:
Q  305 ctacctggattactcctcatcaattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttag 404  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||  ||||  | |||||| ||||||||  ||||||| || ||||| |||||||| |||||||    
T  19705809 ctaccaggattgctcctcaacaattcctcagcatagtttcacagatatgcatattgttcatctatggcaccatggataagttctaaagccttcttcttag 19705710  T
Q  405 ccctata 411  Q
    |||||||    
T  19705709 ccctata 19705703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 19695507 - 19695388
Alignment:
Q  24 aataccgttcaagtcacccaaaagaaggtcaagaaaccaatcccatgaatcctttgttttagcttctactattacaaatgcaataggcagcatctggttg 123  Q
    |||||| |||||||||||||| |  || ||  ||||||| ||||||| ||||||||||| |||||| |||| | |||||||||| || | ||| || |||    
T  19695507 aataccattcaagtcacccaataacagttccggaaaccagtcccatgcatcctttgtttcagcttccactactgcaaatgcaattggtaacatttgattg 19695408  T
Q  124 ttcccatctttcccaattgc 143  Q
    ||  ||||||||| ||||||    
T  19695407 ttgtcatctttcctaattgc 19695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 19706092 - 19705973
Alignment:
Q  24 aataccgttcaagtcacccaaaagaaggtcaagaaaccaatcccatgaatcctttgttttagcttctactattacaaatgcaataggcagcatctggttg 123  Q
    |||||| |||||||||||||| |  || ||  ||||||| ||||||| ||||||||||| |||||| |||| | |||||||||| || | ||| || |||    
T  19706092 aataccattcaagtcacccaataacagttccggaaaccagtcccatgcatcctttgtttcagcttccactactgcaaatgcaattggtaacatttgattg 19705993  T
Q  124 ttcccatctttcccaattgc 143  Q
    ||  ||||||||| ||||||    
T  19705992 ttgtcatctttcctaattgc 19705973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 416
Target Start/End: Original strand, 29921634 - 29921739
Alignment:
Q  311 ggattactcctcatcaattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttagccctat 410  Q
    |||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||| ||||||| || ||||  |||||||| |||||||||||||    
T  29921634 ggattactcctcatcaattcttcagcataatttctgagatgagcatattgctcatctattgcaccatggataagttttaaagccttcttcttagccctat 29921733  T
Q  411 aaatct 416  Q
    | ||||    
T  29921734 atatct 29921739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 52 - 411
Target Start/End: Original strand, 3343149 - 3343510
Alignment:
Q  52 tcaagaaaccaatcccatgaatcctttgttttagcttctactattacaaatgcaataggcagcatctggttgttcccatctttcccaattgcagccaaaa 151  Q
    ||||||||| | ||||||||||||||||| | |||||| |||| | |||||||||| || | ||| || ||||| ||||||||||||||||| || || |    
T  3343149 tcaagaaactagtcccatgaatcctttgtctcagcttccactactgcaaatgcaattggtaacatttgattgttgccatctttcccaattgctgctaata 3343248  T
Q  152 ggtgtccaacatacatgcctttttaaaagcatacgtcaaggctgatcaagggcatacaggttattgcaaattccctcttgcatgcattaaagcatacata 251  Q
     ||||||  |||   | |||||  |||| ||  | || || |  || || ||  |||| ||  |||||||| |||||||||| |||| ||| || |||||    
T  3343249 agtgtcctccatctcttcctttcaaaaaacacccatctagaccaattaatggtctacaagtagttgcaaatgccctcttgcaagcataaaaacaaacata 3343348  T
Q  252 tc--ctttcaaacactggccctgcatctccaactgcacatttaatcctatcagtgctacctggattactcctcatcaattcctcagcataatttctaaga 349  Q
    |   || ||||| || ||||| ||||| | | ||  ||| ||||||  | || |||| || ||||| ||||||| ||||||||||||||| ||||| |||    
T  3343349 tattctctcaaaaacaggcccagcatcactatctttacacttaatcaaaacactgcttccaggattgctcctcaacaattcctcagcatagtttctcaga 3343448  T
Q  350 tgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttagccctata 411  Q
    || |||||||||||||||||  ||||||| || ||||| |||||||| ||||||||||||||    
T  3343449 tgcgaatattgctcatctatggcaccatggataagttctaaagccttcttcttagccctata 3343510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 29921336 - 29921477
Alignment:
Q  1 atgaaagaccgcttctttgcttgaataccgttcaagtcacccaaaagaaggtcaagaaaccaatcccatgaatcctttgttttagcttctactattacaa 100  Q
    |||||||||| ||| ||||||||||| || ||||| | |  ||| ||||| ||||||||||| || ||||  |||||||||| | ||||||||| | |||    
T  29921336 atgaaagaccacttttttgcttgaatgccattcaaattagtcaatagaagatcaagaaaccagtctcatgcttcctttgtttcaacttctactactgcaa 29921435  T
Q  101 atgcaataggcagcatctggttgttcccatctttcccaattg 142  Q
    ||||| | |||||| | || || ||| |||||||||||||||    
T  29921436 atgcatttggcagcgtttgattattctcatctttcccaattg 29921477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 26358625 - 26358571
Alignment:
Q  325 caattcctcagcataatttctaagatgagaatattgctcatctattccaccatga 379  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||  ||||||||    
T  26358625 caattcctcagcataattcttaagatgagcatattgctcatctatagcaccatga 26358571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1171 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold1171
Description:

Target: scaffold1171; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 305 - 411
Target Start/End: Original strand, 134 - 240
Alignment:
Q  305 ctacctggattactcctcatcaattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttag 404  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||| ||||| | ||||||||||||||| |||||||| || ||||| |||||||| |||||||    
T  134 ctaccaggattgctcctcaacaattcctcagcatagtttctcagatgcgcatattgctcatctatgccaccatggataagttctaaagccttcttcttag 233  T
Q  405 ccctata 411  Q
    |||||||    
T  234 ccctata 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 411
Target Start/End: Original strand, 25201 - 25301
Alignment:
Q  311 ggattactcctcatcaattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttagccctat 410  Q
    ||||| ||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||  ||||||| || ||||| |||||||| |||||||||||||    
T  25201 ggattgctcctcaacaattcctcagcatagtttctcagatgcgaatattgctcatctatggcaccatggataagttctaaagccttcttcttagccctat 25300  T
Q  411 a 411  Q
    |    
T  25301 a 25301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 24940 - 25031
Alignment:
Q  52 tcaagaaaccaatcccatgaatcctttgttttagcttctactattacaaatgcaataggcagcatctggttgttcccatctttcccaattgc 143  Q
    ||||||||| | ||||||||||||||||| | |||||| |||| | |||||||||| || | ||| || ||||| |||||||||||||||||    
T  24940 tcaagaaacaagtcccatgaatcctttgtctcagcttccactactgcaaatgcaattggtaacatttgattgttgccatctttcccaattgc 25031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 411
Target Start/End: Complemental strand, 17099220 - 17099120
Alignment:
Q  311 ggattactcctcatcaattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttagccctat 410  Q
    ||||| ||||||| ||||||||||||||| ||||| ||||| |||||||||||||||||  ||||||| || ||||| |||||||| |||||||||||||    
T  17099220 ggattgctcctcaacaattcctcagcatagtttctcagatgcgaatattgctcatctatggcaccatggataagttctaaagccttcttcttagccctat 17099121  T
Q  411 a 411  Q
    |    
T  17099120 a 17099120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 17099481 - 17099390
Alignment:
Q  52 tcaagaaaccaatcccatgaatcctttgttttagcttctactattacaaatgcaataggcagcatctggttgttcccatctttcccaattgc 143  Q
    ||||||||||| ||||||||||||||||| | |||||| |||| | |||||||||| || | ||| || ||||| |||||||||||||||||    
T  17099481 tcaagaaaccagtcccatgaatcctttgtctcagcttccactactgcaaatgcaattggtaacatttgattgttgccatctttcccaattgc 17099390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 26071919 - 26072007
Alignment:
Q  55 agaaaccaatcccatgaatcctttgttttagcttctactattacaaatgcaataggcagcatctggttgttcccatctttcccaattgc 143  Q
    |||||||||||||| || ||||| |||| ||| || || |   |||||||||| |||| |||||| || ||||||||||| ||||||||    
T  26071919 agaaaccaatcccaagattccttggtttcagcctccacaacagcaaatgcaatgggcatcatctgattattcccatctttaccaattgc 26072007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 411
Target Start/End: Original strand, 20590372 - 20590472
Alignment:
Q  311 ggattactcctcatcaattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttagccctat 410  Q
    ||||| ||||||| ||||||||||||||| ||||| ||||| | ||||||||||||||| |||||||| || ||||| |||||||| |||||||||||||    
T  20590372 ggattgctcctcaacaattcctcagcatagtttctcagatgcgcatattgctcatctatgccaccatggataagttctaaagccttcttcttagccctat 20590471  T
Q  411 a 411  Q
    |    
T  20590472 a 20590472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 20590090 - 20590202
Alignment:
Q  31 ttcaagtcacccaaaagaaggtcaagaaaccaatcccatgaatcctttgttttagcttctactattacaaatgcaataggcagcatctggttgttcccat 130  Q
    |||||||||||||| |  || || |||||||| ||||||| ||||||||||| |||||| |||| | |||||||||| || | ||| || ||||| ||||    
T  20590090 ttcaagtcacccaataacagttccagaaaccagtcccatgcatcctttgtttaagcttccactactgcaaatgcaattggtaacatttgattgttaccat 20590189  T
Q  131 ctttcccaattgc 143  Q
    |||||||||||||    
T  20590190 ctttcccaattgc 20590202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 411
Target Start/End: Original strand, 11332537 - 11332735
Alignment:
Q  215 ttgcaaattccctcttgcatgcattaaagcatacata--tcctttcaaacactggccctgcatctccaactgcacatttaatcctatcagtgctacctgg 312  Q
    |||||||| || ||||||||||||  ||||| |||||  | |||| ||| ||||| ||| |||| || | |||||| |||||| |  |||||||||| |     
T  11332537 ttgcaaatgccatcttgcatgcatagaagcacacatacattctttaaaaaactggtcctccatcacctaatgcacacttaatcttcacagtgctaccaga 11332636  T
Q  313 attactcctcatcaattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttagccctata 411  Q
    ||| |||||| | ||||||| |||||||| ||| | ||| | |||||||||||||||  ||||||| || || |||||| |||| ||||||||||||||    
T  11332637 attgctcctcctaaattccttagcataatatctcatatgcgcatattgctcatctatggcaccatgtataagctccaaatccttcttcttagccctata 11332735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 411
Target Start/End: Complemental strand, 14767173 - 14767073
Alignment:
Q  311 ggattactcctcatcaattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaaagccttattcttagccctat 410  Q
    ||||| ||||||| |||||||| |||||| ||| | | |||   |||||||||||||||  ||||||| || |||||||||||||| ||||||| |||||    
T  14767173 ggattgctcctcaacaattccttagcatagtttttcaaatgcacatattgctcatctatggcaccatggataagttccaaagccttcttcttagtcctat 14767074  T
Q  411 a 411  Q
    |    
T  14767073 a 14767073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 14767455 - 14767343
Alignment:
Q  31 ttcaagtcacccaaaagaaggtcaagaaaccaatcccatgaatcctttgttttagcttctactattacaaatgcaataggcagcatctggttgttcccat 130  Q
    ||||||||| |||| |  || ||||||||| | || ||||  |||||||||| ||||||||||| | |||||||||| || | ||| || ||||| ||||    
T  14767455 ttcaagtcagccaataacagttcaagaaacgagtctcatgcttcctttgtttcagcttctactactgcaaatgcaattggtaacatttgattgtttccat 14767356  T
Q  131 ctttcccaattgc 143  Q
    ||||| |||||||    
T  14767355 ctttctcaattgc 14767343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 271654 - 271719
Alignment:
Q  325 caattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaa 390  Q
    |||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||| ||||||    
T  271654 caattcctcagcataattcctaagatgagcatattgctcatctatagcaccatgaatcatttccaa 271719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 390
Target Start/End: Complemental strand, 180608 - 180543
Alignment:
Q  325 caattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatcagttccaa 390  Q
    |||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||| ||||||    
T  180608 caattcctcagcataattcctaagatgagcatattgctcatctatagcaccatgaatcatttccaa 180543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 180880 - 180792
Alignment:
Q  55 agaaaccaatcccatgaatcctttgttttagcttctactattacaaatgcaataggcagcatctggttgttcccatctttcccaattgc 143  Q
    |||||||||||||| || ||||| |||| ||| || || |   |||||||||| |||| |||||| || ||||||||||| ||||||||    
T  180880 agaaaccaatcccaagattccttggtttcagcctccacaacagcaaatgcaatgggcatcatctgattattcccatctttaccaattgc 180792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 20895060 - 20895118
Alignment:
Q  325 caattcctcagcataatttctaagatgagaatattgctcatctattccaccatgaatca 383  Q
    |||||||||||||||||| |||||||||| |||||||||||||||  ||||||||||||    
T  20895060 caattcctcagcataattcctaagatgagcatattgctcatctatagcaccatgaatca 20895118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 20894788 - 20894876
Alignment:
Q  55 agaaaccaatcccatgaatcctttgttttagcttctactattacaaatgcaataggcagcatctggttgttcccatctttcccaattgc 143  Q
    ||||| |||||||| || ||||| |||| ||| || || |  ||||||||||| |||| |||||| || ||||||||||| ||||||||    
T  20894788 agaaaacaatcccaagattccttggtttcagcctccacaacaacaaatgcaatgggcatcatctgattattcccatctttaccaattgc 20894876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University