View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6872A_low_179 (Length: 252)
Name: NF6872A_low_179
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6872A_low_179 |
 | |
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| [»] chr8 (2 HSPs) |
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| [»] chr3 (4 HSPs) |
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| [»] chr7 (2 HSPs) |
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| [»] chr2 (4 HSPs) |
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| [»] chr1 (4 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0051 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0897 (1 HSPs) |
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| [»] scaffold0319 (2 HSPs) |
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| [»] scaffold0304 (2 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 1729971 - 1730217
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
1729971 |
ctgaaacgaagcggaaacgggtgtccccgcctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtct |
1730070 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
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|
| T |
1730071 |
agcggaatcaagtctgacatcgttaagcaccctcagcagtacatcgaagtacagggcggtcacagagccagcgtccatagcattcttcagcaaaccttgg |
1730170 |
T |
|
| Q |
206 |
acggtaggaatgcagggctcagggtccagcatgaactgggtacacct |
252 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||| |||||||| |
|
|
| T |
1730171 |
acggtaggaatacagggctcagggtacagcatgaactgagtacacct |
1730217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 22338649 - 22338586
Alignment:
| Q |
125 |
ccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcat |
188 |
Q |
| |
|
||||| || |||||||||| ||||| ||||| || ||| |||||||||||||||||||||||| |
|
|
| T |
22338649 |
ccgtcgagtgccctcagcatgacatcaaagtagagcgcgctcacagagccagcatccatagcat |
22338586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 10787153 - 10787399
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||||||||| |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| | |
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|
| T |
10787153 |
ctgaaacgaagcggaaacgggtgtccccgcctgttatctctctgcgatagcgcgcaacgttttttgtctccaaaagagaccagaaatcatgaaaaagtct |
10787252 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || || ||| |||||| |
|
|
| T |
10787253 |
agcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcgtccatagcattctgcaacaagccttgg |
10787352 |
T |
|
| Q |
206 |
acggtaggaatgcagggctcagggtccagcatgaactgggtacacct |
252 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10787353 |
acggtaggaatgcagggctcagggtctagcatgaactgggtacacct |
10787399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 6 - 252
Target Start/End: Complemental strand, 14688640 - 14688394
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||||||||| |||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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|
| T |
14688640 |
ctgaaacgaagcggaaacgggtgtccccgcccgttatatctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccaaaaatcatgaaaaagtgt |
14688541 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
|||||||||| || ||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||| ||||| |||||||||| |
|
|
| T |
14688540 |
agcggtatcaggtgtgataccgtcaagcgccctcagcagcacgtcgaaatacagggcggtcacagagccagcatccatggcattcttcaacaaaccttgg |
14688441 |
T |
|
| Q |
206 |
acggtaggaatgcagggctcagggtccagcatgaactgggtacacct |
252 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14688440 |
atggtagggatgcagggctcagggtccagcatgaactgggtgcacct |
14688394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 252
Target Start/End: Complemental strand, 7360642 - 7360396
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| ||| |||||| ||||||| | |||||||| ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
7360642 |
ctgaaacgaaacggaaagaggtgtccacgcctgttatgtctctacgatagcgcgcgacgtttcgtgtctccaaaagagacaagaaatcatgaaaaagtgc |
7360543 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
||||| |||| || |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
7360542 |
agcggcatcaggtgtgacaccgtcaagcgccctcagcagtacgtcgaagtacagagcggtcacagagccagcatccatggcattcttcaagaaaccttgg |
7360443 |
T |
|
| Q |
206 |
acggtaggaatgcagggctcagggtccagcatgaactgggtacacct |
252 |
Q |
| |
|
| |||||| | |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7360442 |
atggtagggacgcagggctcaggatccagcatgaactgggtacacct |
7360396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 10157934 - 10158154
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||||| || |||| |||||| || |||||||| |||||||| ||||| || || | ||||||||||||||||| || |||| |||||| |
|
|
| T |
10157934 |
ctgaaacgaagcgaaagtgggagtcccctcccgttatctccctgcgataacgcgcaacattcttcgtctccaaaagagaccaaaagtcattgaaaagttc |
10158033 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
|| ||||| | || ||||||||||||||||| || |||||| ||||| || ||| |||| |||||| |||||||||||| ||| ||| || | | |
|
|
| T |
10158034 |
agttatatcaggagagataccgtcaagcgccctcaacattacatcaaagtaaagcgcgctcacggagccatcatccatagcattcttgagcgaatacttg |
10158133 |
T |
|
| Q |
206 |
acggtaggaatgcagggctca |
226 |
Q |
| |
|
|| ||||||||||| |||||| |
|
|
| T |
10158134 |
acagtaggaatgcatggctca |
10158154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 6 - 252
Target Start/End: Complemental strand, 14329171 - 14328925
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||||||||| |||||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
14329171 |
ctgaaacgaagcggaaacgggtgtccacacccgttatgtctctgcgatagcgcgcgacgtttcgtgtctccaaaagagaccagaaatcatgaaaaagtgt |
14329072 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
||||| |||| || ||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||| | |
|
|
| T |
14329071 |
agcggcatcaggtgtgataccgtcaagcgccctcagcagtacgtcgaagtacagagcggtcacagagccagcatccatggcattcttcagcaaaccttag |
14328972 |
T |
|
| Q |
206 |
acggtaggaatgcagggctcagggtccagcatgaactgggtacacct |
252 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14328971 |
atggtagggatgcagggctcagggtccagcatgaactgggtacacct |
14328925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 18166800 - 18166572
Alignment:
| Q |
13 |
gaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttctt-gtctccaaaagagaccagaaatcatgaaaaagtgtagcggt |
111 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||| |||||||| ||||| || ||| || ||||||||||||||||| || |||| || ||| |||||| |
|
|
| T |
18166800 |
gaagcggaaatgggagtcccctcctgttatctccctgcgataacgcgcaacatttttttgtctccaaaagagaccaaaagtcattgaagagttcagcggt |
18166701 |
T |
|
| Q |
112 |
atcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttggacggta |
211 |
Q |
| |
|
|||| | ||| |||||||||||| ||||||| |||||| ||||| || ||||||||||| |||||||||||||| | | | ||||||| | ||||||| |
|
|
| T |
18166700 |
atcaggagtgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcctaagcaaacgcttgacggta |
18166601 |
T |
|
| Q |
212 |
ggaatgcagggctcagggtccagcatgaa |
240 |
Q |
| |
|
|||||||| |||||| ||||||||||| |
|
|
| T |
18166600 |
ggaatgcatggctcaacatccagcatgaa |
18166572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 151; Significance: 5e-80; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 24954705 - 24954951
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||||||||| ||||||| | |||||||| |||| ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
24954705 |
ctgaaacgaagcggaaacaggtgtccacgcctgttatgtctcgacgatatcgcgcgacgtttcgtgtctccagaagagaccagaaatcatgaaaaagtgt |
24954804 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
||||| |||| || ||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| ||||||||| |||||| |
|
|
| T |
24954805 |
agcggcatcaggtgtgataccgtcaagcgccctcagcagtacgtcgaagtacagagcggtcacagagccagcatccatggcattcttcagcaagccttgg |
24954904 |
T |
|
| Q |
206 |
acggtaggaatgcagggctcagggtccagcatgaactgggtacacct |
252 |
Q |
| |
|
| |||||| ||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
24954905 |
atggtagggatgcaaggctcagggtccaacatgaactgggtacacct |
24954951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 23621632 - 23621413
Alignment:
| Q |
7 |
tgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgta |
106 |
Q |
| |
|
||||| |||||||||||||| |||||| ||||||||||| |||||||| ||||| || ||| ||||||||||||||||||| || ||| || ||| | |
|
|
| T |
23621632 |
tgaaacgaagcggaaatgggagtcccctcctgttatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcaatgaagagttca |
23621533 |
T |
|
| Q |
107 |
gcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgga |
206 |
Q |
| |
|
||||| ||| | ||| |||||||||||| ||||||| |||||| ||||| || ||||||||||| |||||||||||||||| | | ||||||| || | |
|
|
| T |
23621532 |
gcggtgtcaggagtgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcattcctaagcaaacgtttaa |
23621433 |
T |
|
| Q |
207 |
cggtaggaatgcagggctca |
226 |
Q |
| |
|
||||||||||||| |||||| |
|
|
| T |
23621432 |
cggtaggaatgcatggctca |
23621413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 23196021 - 23195795
Alignment:
| Q |
14 |
aagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgtagcggtat |
113 |
Q |
| |
|
||||||||||||| |||||| ||| ||||||| |||||||| ||||| || ||| ||||||||||||||||||| || |||| || ||| |||||||| |
|
|
| T |
23196021 |
aagcggaaatgggagtcccctcctattatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcattgaagagttcagcggtat |
23195922 |
T |
|
| Q |
114 |
caagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttggacggtagg |
213 |
Q |
| |
|
|| | ||| |||||||||||| ||||||| |||||| ||||| || ||||||||||| ||||||||||||| | | | ||||||| | ||||||||| |
|
|
| T |
23195921 |
caggagtgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagtgttcctaagcaaacacttgacggtagg |
23195822 |
T |
|
| Q |
214 |
aatgcagggctcagggtccagcatgaa |
240 |
Q |
| |
|
|||||| |||||| |||||||||||| |
|
|
| T |
23195821 |
aatgcatggctcaacgtccagcatgaa |
23195795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 22643330 - 22643556
Alignment:
| Q |
13 |
gaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgtagcggta |
112 |
Q |
| |
|
|||| ||||||||| ||||| |||||| |||| |||||||| |||| || ||| ||||||||||||||||||| || |||| || ||| ||||||| |
|
|
| T |
22643330 |
gaagtggaaatgggactcccctcctgttgtctccctgcgataatgcgcaacattttttgtctccaaaagagaccaaaagtcattgaagagttcagcggta |
22643429 |
T |
|
| Q |
113 |
tcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttggacggtag |
212 |
Q |
| |
|
|||| ||| |||||||||||| ||||||| |||||| ||||| || ||||||||||| ||||||||||| || | | | ||||||| | ||| ||| |
|
|
| T |
22643430 |
tcaaaa-tgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatggcgttcctaagcaaacgcttgacaatag |
22643528 |
T |
|
| Q |
213 |
gaatgcagggctcagggtccagcatgaa |
240 |
Q |
| |
|
||||||| |||||| ||||||||||| |
|
|
| T |
22643529 |
gaatgcatggctcaacatccagcatgaa |
22643556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 92 - 252
Target Start/End: Complemental strand, 41375532 - 41375372
Alignment:
| Q |
92 |
tcatgaaaaagtgtagcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgct |
191 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
41375532 |
tcatgaaaaagtctagcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcgtccatagcattct |
41375433 |
T |
|
| Q |
192 |
tcagcaaaccttggacggtaggaatgcagggctcagggtccagcatgaactgggtacacct |
252 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41375432 |
tcagcaagccttggacggtaggaatgcagggctcagggtccagcatgaactgggtacacct |
41375372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 226
Target Start/End: Original strand, 22080977 - 22081190
Alignment:
| Q |
13 |
gaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgtagcggta |
112 |
Q |
| |
|
|||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| |
|
|
| T |
22080977 |
gaagcggaaacgggtatccccgcctgttatctccctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaagagttcagcagta |
22081076 |
T |
|
| Q |
113 |
tcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttggacggtag |
212 |
Q |
| |
|
||| || ||| ||| |||||||||||||||||||| |||||||| || ||||||||||| ||||||||||| || | ||| || ||||||| |||||||| |
|
|
| T |
22081077 |
tcaggtgtgataccatcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagaaaacctttgacggtag |
22081176 |
T |
|
| Q |
213 |
gaatgcagggctca |
226 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
22081177 |
gaatgcatggctca |
22081190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 41375593 - 41375531
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttc |
68 |
Q |
| |
|
|||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
41375593 |
ctgaaacgaagcggaaacgggtgtccccgcctgttatctctctgcgatagcgcgcgacgtttc |
41375531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 22799852 - 22799786
Alignment:
| Q |
122 |
acaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcat |
188 |
Q |
| |
|
||||| |||||||||||||||| ||||| ||||| || ||| |||||||||||||||||||||||| |
|
|
| T |
22799852 |
acaccatcaagcgccctcagcatgacatcaaagtagagcgcgctcacagagccagcatccatagcat |
22799786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 225
Target Start/End: Original strand, 38909 - 39128
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
||||||||||||||||||||| ||| | ||| ||||||| |||||||| ||||| || ||| | ||||||||||||||||| || |||| |||||| |
|
|
| T |
38909 |
ctgaaatgaagcggaaatgggaatcctctcctattatctccctgcgataacgcgcaacatttttcgtctccaaaagagaccaaaagtcattgaaaagttc |
39008 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
|||||||||| | ||| |||||||||||| ||||||| |||||| ||||| || ||||||||||| |||||||||||||| | | | ||||||| || | |
|
|
| T |
39009 |
agcggtatcaggagtgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcctaagcaaacgtttg |
39108 |
T |
|
| Q |
206 |
acggtaggaatgcagggctc |
225 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
39109 |
acggtaggaatgcatggctc |
39128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 225
Target Start/End: Complemental strand, 32829 - 32610
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
||||||||||||||||||||| ||| | ||| ||||||| |||||||| ||||| || ||| | ||||||||||||||||| || |||| |||||| |
|
|
| T |
32829 |
ctgaaatgaagcggaaatgggaatcctctcctattatctccctgcgataacgcgcaacatttttcgtctccaaaagagaccaaaagtcattgaaaagttc |
32730 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
|||||||||| | ||| |||||||||||| ||||||| |||||| ||||| || ||||||||||| |||||||||||||| | | | ||||||| || | |
|
|
| T |
32729 |
agcggtatcaggagtgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcctaagcaaacgtttg |
32630 |
T |
|
| Q |
206 |
acggtaggaatgcagggctc |
225 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
32629 |
acggtaggaatgcatggctc |
32610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 226
Target Start/End: Original strand, 74440 - 74653
Alignment:
| Q |
13 |
gaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgtagcggta |
112 |
Q |
| |
|
|||||| ||| |||||||||| ||||||||||| |||||||||||||| || ||| | ||||||||||||||||| || |||| || ||| ||||||| |
|
|
| T |
74440 |
gaagcgaaaacgggtgtcccctcctgttatctccctgcgatagcgcgcaacatttttcgtctccaaaagagaccaaaactcattgaagagttcagcggta |
74539 |
T |
|
| Q |
113 |
tcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttggacggtag |
212 |
Q |
| |
|
||| || ||| ||||||||| || |||| || |||||| ||||| || ||||||||||| |||||||||||||| | ||| |||||| | |||||||| |
|
|
| T |
74540 |
tcaggtgtgataccgtcaagtgctctcaccattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcttaagcaaatgcttgacggtag |
74639 |
T |
|
| Q |
213 |
gaatgcagggctca |
226 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
74640 |
gaatgcatggctca |
74653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 14562410 - 14562190
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||||||||||||| ||||| ||| ||||||| |||||||| ||||| || ||| | ||||||||||||||||| || |||| |||||| |
|
|
| T |
14562410 |
ctgaaacgaagcggaaatgggaatcccctcctattatctccctgcgataacgcgcaacatttttcgtctccaaaagagaccaaaagtcattgaaaagttc |
14562311 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
|| || |||| | ||| |||||||| ||||||||||| |||||| ||||| || ||| ||||||||||||| |||||||||| | | ||||||| | | |
|
|
| T |
14562310 |
agtggcatcaggagtgataccgtcaatcgccctcagcattacatcaaagtaaagagcgctcacagagccagcgtccatagcattcctaagcaaacgcttg |
14562211 |
T |
|
| Q |
206 |
acggtaggaatgcagggctca |
226 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
14562210 |
acggtaggaatgcatggctca |
14562190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 13284552 - 13284332
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||||| |||| || |||||| || |||||||| |||||||| || || || || | ||||||||||||||||| || |||| || ||| |
|
|
| T |
13284552 |
ctgaaacgaagcgaaaataggagtcccctcccgttatctccctgcgataacgagcaacattcttcgtctccaaaagagaccaaaagtcattgaagagttc |
13284453 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
|| ||||||| | ||| |||||||||||||||||||| |||||| ||||| || ||| ||||||||||||| |||||||| | | | ||||||| | | |
|
|
| T |
13284452 |
agtggtatcaggagtgataccgtcaagcgccctcagcattacatcaaagtaaagagcgctcacagagccagcgtccatagcgttcctaagcaaacgcttg |
13284353 |
T |
|
| Q |
206 |
acggtaggaatgcagggctca |
226 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
13284352 |
acggtaggaatgcatggctca |
13284332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 14742024 - 14741960
Alignment:
| Q |
122 |
acaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagc |
186 |
Q |
| |
|
||||| |||||||||||||||| ||||| ||||| || ||| |||||||||||||||||||||| |
|
|
| T |
14742024 |
acaccatcaagcgccctcagcatgacatcaaagtagagcgcgctcacagagccagcatccatagc |
14741960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 28618 - 28838
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||||| ||||||| |||||| ||||||||||| |||||||| ||||| || ||| | ||||||||||||||||| || ||| || ||| |
|
|
| T |
28618 |
ctgaaacgaagcgaaaatgggagtcccctcctgttatctccctgcgataacgcgcaacatttttcgtctccaaaagagaccaaaagtcaatgaagagttc |
28717 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
|| ||||||| | ||| |||||||||||||||||||| |||||| ||||| || ||| | ||||||||||| |||||||| | | | ||||||| | | |
|
|
| T |
28718 |
agtggtatcatgagtgataccgtcaagcgccctcagcattacatcaaagtaaagagcgcttacagagccagcgtccatagcgttcctaagcaaacgcttg |
28817 |
T |
|
| Q |
206 |
acggtaggaatgcagggctca |
226 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
28818 |
acggtaggaatgcatggctca |
28838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 35983 - 36203
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||||| || |||| |||||| ||||||||||| |||||||| ||||| || || |||||||||||||||||||||| |||| || ||| |
|
|
| T |
35983 |
ctgaaacgaagcgaaagtgggagtcccctcctgttatctccctgcgataacgcgcaacattctttgtctccaaaagagaccagaagtcattgaagagttc |
36082 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
|| | ||||| | ||| |||||||||||||||||||| |||||| ||||| || ||| | || || ||||| |||||||||| | | ||||||| || | |
|
|
| T |
36083 |
agtgatatcaggagtgataccgtcaagcgccctcagcattacatcaaagtaaagagcgtttacggaaccagcgtccatagcattcctaagcaaacgtttg |
36182 |
T |
|
| Q |
206 |
acggtaggaatgcagggctca |
226 |
Q |
| |
|
|| ||||||||||| |||||| |
|
|
| T |
36183 |
acagtaggaatgcatggctca |
36203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0897 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0897
Description:
Target: scaffold0897; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 4015 - 3789
Alignment:
| Q |
14 |
aagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgtagcggtat |
113 |
Q |
| |
|
|||| |||||||| ||||| ||||||||||| |||||||| ||||| || ||| ||||||||||||||||||| || |||| || ||| |||||||| |
|
|
| T |
4015 |
aagcagaaatgggaatcccctcctgttatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcattgaagagttcagcggtat |
3916 |
T |
|
| Q |
114 |
caagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttggacggtagg |
213 |
Q |
| |
|
|| | ||| ||||| ||||| ||||||| |||||| ||||| || ||||||||||| ||||||||||| || | ||| |||| || | || |||||| |
|
|
| T |
3915 |
caggagtgatgccgtcgagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatggcgttcttaagcagacgcttgatggtagg |
3816 |
T |
|
| Q |
214 |
aatgcagggctcagggtccagcatgaa |
240 |
Q |
| |
|
|||||| |||||| ||||||||||| |
|
|
| T |
3815 |
aatgcatggctcaacatccagcatgaa |
3789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 19401 - 19621
Alignment:
| Q |
6 |
ctgaaatgaagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgt |
105 |
Q |
| |
|
|||||| |||| ||||||||| ||||| ||||||||||| |||||||| ||||| || ||| ||||||||||||||||||| || |||| |||||| |
|
|
| T |
19401 |
ctgaaacgaagtggaaatgggaatcccctcctgttatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcattgaaaagttc |
19500 |
T |
|
| Q |
106 |
agcggtatcaagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttgg |
205 |
Q |
| |
|
|| || |||| | ||| |||||||| |||| |||| | |||||| ||||| || ||| ||||||||||||| |||||||||| | ||||||| | | |
|
|
| T |
19501 |
agtggcatcaggagtgataccgtcaatcgccatcagaattacatcaaagtaaagagcgctcacagagccagcgtccatagcatttctaagcaaacgcttg |
19600 |
T |
|
| Q |
206 |
acggtaggaatgcagggctca |
226 |
Q |
| |
|
|||||| ||||||| |||||| |
|
|
| T |
19601 |
acggtacgaatgcatggctca |
19621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 13680 - 13782
Alignment:
| Q |
124 |
accgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttggacggtaggaatgcagggc |
223 |
Q |
| |
|
|||||||| ||||||||||| |||||| ||||| || ||| ||||||||||||| |||||||||| | | ||||||| | ||||||||||||||| ||| |
|
|
| T |
13680 |
accgtcaatcgccctcagcattacatcaaagtaaagagcgctcacagagccagcgtccatagcattcctaagcaaacgcttgacggtaggaatgcatggc |
13779 |
T |
|
| Q |
224 |
tca |
226 |
Q |
| |
|
||| |
|
|
| T |
13780 |
tca |
13782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0304
Description:
Target: scaffold0304; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 12452 - 12240
Alignment:
| Q |
14 |
aagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgtagcggtat |
113 |
Q |
| |
|
|||| |||||||| || || ||||||||||| |||||||| ||||| || ||| ||||||||||||||||||| || |||| |||||| || ||||| |
|
|
| T |
12452 |
aagcagaaatgggaatcgcctcctgttatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcattgaaaagttcagtggtat |
12353 |
T |
|
| Q |
114 |
caagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttggacggtagg |
213 |
Q |
| |
|
|| | ||| | |||||||||||||||||| ||||| ||||| || ||| ||||||||||||| |||||||||| | | || |||| | || |||||| |
|
|
| T |
12352 |
caggagtgatatcgtcaagcgccctcagcattacatgaaagtaaagagcgctcacagagccagcgtccatagcattcctaagaaaacgcttgatggtagg |
12253 |
T |
|
| Q |
214 |
aatgcagggctca |
226 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
12252 |
aatgcatggctca |
12240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 18203 - 17991
Alignment:
| Q |
14 |
aagcggaaatgggtgtccccacctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtgtagcggtat |
113 |
Q |
| |
|
|||| |||||||| || || ||||||||||| |||||||| ||||| || ||| ||||||||||||||||||| || |||| |||||| || ||||| |
|
|
| T |
18203 |
aagcagaaatgggaatcgcctcctgttatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcattgaaaagttcagtggtat |
18104 |
T |
|
| Q |
114 |
caagtctgacaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttggacggtagg |
213 |
Q |
| |
|
|| | ||| | |||||||||||||||||| ||||| ||||| || ||| ||||||||||||| |||||||||| | | || |||| | || |||||| |
|
|
| T |
18103 |
caggagtgatatcgtcaagcgccctcagcattacatgaaagtaaagagcgctcacagagccagcgtccatagcattcctaagaaaacgcttgatggtagg |
18004 |
T |
|
| Q |
214 |
aatgcagggctca |
226 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
18003 |
aatgcatggctca |
17991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 2215 - 2149
Alignment:
| Q |
122 |
acaccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcat |
188 |
Q |
| |
|
||||| |||||||||||||||| ||||| ||||| || || |||||||||||||||||||||||| |
|
|
| T |
2215 |
acaccatcaagcgccctcagcatgacatcaaagtagagcacgctcacagagccagcatccatagcat |
2149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 19030232 - 19030131
Alignment:
| Q |
125 |
ccgtcaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcatgcttcagcaaaccttggacggtaggaatgcagggct |
224 |
Q |
| |
|
|||||||| |||||||||| |||||| || || || ||| || ||||||||||||||||| ||| | | || |||| | ||||||||||||||| |||| |
|
|
| T |
19030232 |
ccgtcaagtgccctcagcattacatcaaaatagagtgcgctcgcagagccagcatccataacattcctaagaaaacgcttgacggtaggaatgcatggct |
19030133 |
T |
|
| Q |
225 |
ca |
226 |
Q |
| |
|
|| |
|
|
| T |
19030132 |
ca |
19030131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 121823 - 121771
Alignment:
| Q |
136 |
cctcagcagtacatcgaagtacagggcggtcacagagccagcatccatagcat |
188 |
Q |
| |
|
||||||||| ||||| || || || ||| |||||||||||||||||||||||| |
|
|
| T |
121823 |
cctcagcaggacatcaaaatagagcgcgctcacagagccagcatccatagcat |
121771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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