View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6872A_low_209 (Length: 247)
Name: NF6872A_low_209
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6872A_low_209 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 43331451 - 43331687
Alignment:
| Q |
1 |
atcacttcttgttactattccctcctttctttcttgataagaacattgtcgcctaaccaacaattttatacattgcataaatgcaaaaccatatataatc |
100 |
Q |
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| T |
43331451 |
atcacctcttgttacttttccctcctttctttcttgataagaacattgtcgcctaaccaacaattttatacattgcataaatgcaaaaccatatataatc |
43331550 |
T |
|
| Q |
101 |
attgaccactaactaaaaagagaggccttttataaaatcaatttgataaagatagaggaaaggaccacacattcttgttttagagtgattttaaccgaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
43331551 |
attgaccactaactaaaaagagaggccttttataaaatcaatttgataaagatagaggaaaggaccacacatccttgttttagagtgattttaaccgaac |
43331650 |
T |
|
| Q |
201 |
actgaacactcataaacttttttcttagattggaaca |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
43331651 |
actgaacactcataaacttttttcttagattggaaca |
43331687 |
T |
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