View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6872A_low_233 (Length: 243)

Name: NF6872A_low_233
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6872A_low_233
NF6872A_low_233
[»] chr4 (48 HSPs)
chr4 (21-144)||(19634932-19635055)
chr4 (21-144)||(12479396-12479519)
chr4 (21-144)||(16234085-16234208)
chr4 (21-144)||(17092242-17092365)
chr4 (21-144)||(40475836-40475959)
chr4 (21-144)||(8389208-8389331)
chr4 (21-144)||(19775886-19776009)
chr4 (21-144)||(23958543-23958666)
chr4 (21-144)||(8050716-8050839)
chr4 (21-144)||(14301072-14301195)
chr4 (21-144)||(27714132-27714255)
chr4 (21-141)||(16250946-16251066)
chr4 (21-140)||(14683363-14683482)
chr4 (32-141)||(18224542-18224651)
chr4 (138-226)||(12479293-12479381)
chr4 (138-226)||(16234223-16234311)
chr4 (138-226)||(17092380-17092468)
chr4 (139-226)||(8389105-8389192)
chr4 (21-140)||(14162266-14162385)
chr4 (139-226)||(23958440-23958527)
chr4 (140-226)||(27714029-27714115)
chr4 (138-226)||(19776024-19776112)
chr4 (139-226)||(8050855-8050942)
chr4 (139-226)||(14301211-14301298)
chr4 (139-226)||(19634829-19634916)
chr4 (139-226)||(40475733-40475820)
chr4 (140-226)||(16352763-16352849)
chr4 (28-141)||(14188309-14188422)
chr4 (21-141)||(14696897-14697017)
chr4 (21-144)||(15144985-15145107)
chr4 (22-141)||(16219027-16219146)
chr4 (22-141)||(16222347-16222466)
chr4 (140-226)||(18224679-18224765)
chr4 (140-226)||(14683260-14683346)
chr4 (140-226)||(15145125-15145212)
chr4 (21-141)||(16131-16251)
chr4 (66-141)||(16350650-16350725)
chr4 (140-226)||(16251083-16251169)
chr4 (140-226)||(22632393-22632479)
chr4 (154-226)||(16282-16354)
chr4 (140-226)||(16218923-16219009)
chr4 (140-226)||(16222243-16222329)
chr4 (154-226)||(14188199-14188271)
chr4 (154-226)||(14696794-14696866)
chr4 (21-70)||(16352697-16352746)
chr4 (43-140)||(29450894-29450991)
chr4 (154-226)||(14848612-14848684)
chr4 (154-226)||(14162163-14162235)
[»] chr5 (49 HSPs)
chr5 (23-144)||(22350649-22350770)
chr5 (21-144)||(16359230-16359353)
chr5 (21-144)||(27521134-27521257)
chr5 (21-144)||(27666025-27666148)
chr5 (21-144)||(34569222-34569345)
chr5 (21-144)||(40711508-40711631)
chr5 (21-144)||(41773570-41773693)
chr5 (21-144)||(14997274-14997397)
chr5 (21-144)||(22330422-22330545)
chr5 (21-144)||(27613084-27613207)
chr5 (21-144)||(29473608-29473731)
chr5 (21-144)||(19772688-19772811)
chr5 (21-144)||(22137396-22137519)
chr5 (21-144)||(37289031-37289154)
chr5 (21-144)||(27682935-27683058)
chr5 (22-144)||(20803326-20803448)
chr5 (21-141)||(18781842-18781962)
chr5 (21-141)||(21882502-21882622)
chr5 (138-226)||(27612981-27613069)
chr5 (138-226)||(27666163-27666251)
chr5 (138-226)||(40711405-40711493)
chr5 (138-226)||(41773467-41773555)
chr5 (139-226)||(16359127-16359214)
chr5 (139-226)||(22330561-22330648)
chr5 (139-226)||(22350544-22350631)
chr5 (139-226)||(34569119-34569206)
chr5 (138-226)||(19772585-19772673)
chr5 (21-141)||(21342952-21343072)
chr5 (138-226)||(37289169-37289257)
chr5 (139-226)||(22137293-22137380)
chr5 (139-226)||(27521031-27521118)
chr5 (139-226)||(29473747-29473834)
chr5 (21-141)||(26736265-26736385)
chr5 (139-226)||(14997413-14997500)
chr5 (140-226)||(20803222-20803308)
chr5 (21-141)||(25429149-25429269)
chr5 (140-226)||(18781739-18781825)
chr5 (140-226)||(27683075-27683161)
chr5 (21-141)||(21336832-21336952)
chr5 (21-141)||(23473923-23474043)
chr5 (140-218)||(21343089-21343167)
chr5 (73-144)||(23525867-23525938)
chr5 (140-226)||(21882399-21882485)
chr5 (140-226)||(25429046-25429132)
chr5 (154-215)||(23473831-23473892)
chr5 (154-214)||(21336983-21337043)
chr5 (140-226)||(26736402-26736488)
chr5 (44-140)||(20311601-20311697)
chr5 (38-106)||(22505406-22505474)
[»] scaffold0431 (2 HSPs)
scaffold0431 (21-144)||(10193-10316)
scaffold0431 (139-226)||(10090-10177)
[»] scaffold0055 (2 HSPs)
scaffold0055 (21-144)||(22072-22195)
scaffold0055 (139-226)||(21969-22056)
[»] chr8 (49 HSPs)
chr8 (21-144)||(17671818-17671941)
chr8 (21-144)||(19115262-19115385)
chr8 (21-144)||(18859439-18859562)
chr8 (21-144)||(20016059-20016182)
chr8 (21-144)||(19481868-19481991)
chr8 (21-144)||(22126755-22126878)
chr8 (21-141)||(22129416-22129536)
chr8 (21-141)||(30310943-30311063)
chr8 (21-144)||(22117971-22118094)
chr8 (21-141)||(32603007-32603127)
chr8 (138-226)||(19482006-19482094)
chr8 (138-226)||(17671956-17672044)
chr8 (138-226)||(19115159-19115247)
chr8 (138-226)||(20016197-20016285)
chr8 (21-141)||(22042689-22042809)
chr8 (21-140)||(15536245-15536364)
chr8 (21-144)||(19980829-19980952)
chr8 (139-226)||(22126894-22126981)
chr8 (138-226)||(18859336-18859424)
chr8 (21-141)||(21164337-21164457)
chr8 (139-226)||(22118110-22118197)
chr8 (23-141)||(21391660-21391778)
chr8 (23-141)||(21780986-21781104)
chr8 (23-141)||(21786154-21786272)
chr8 (21-141)||(22030965-22031085)
chr8 (21-141)||(22246232-22246352)
chr8 (21-141)||(22375252-22375372)
chr8 (21-141)||(22989907-22990027)
chr8 (140-226)||(15536142-15536228)
chr8 (140-226)||(30311080-30311166)
chr8 (21-141)||(21253807-21253927)
chr8 (21-141)||(22523408-22523528)
chr8 (140-226)||(19980726-19980812)
chr8 (140-226)||(22042586-22042672)
chr8 (140-226)||(22129553-22129639)
chr8 (141-226)||(22030862-22030947)
chr8 (140-226)||(21164474-21164560)
chr8 (140-226)||(32602904-32602990)
chr8 (21-141)||(22421691-22421811)
chr8 (157-226)||(21391814-21391883)
chr8 (157-226)||(21781140-21781209)
chr8 (157-226)||(21786308-21786377)
chr8 (154-226)||(21920054-21920126)
chr8 (140-226)||(21253704-21253790)
chr8 (154-226)||(22246383-22246455)
chr8 (140-226)||(22421828-22421914)
chr8 (140-226)||(22989804-22989890)
chr8 (87-141)||(22245814-22245868)
chr8 (154-226)||(23887787-23887859)
[»] chr7 (40 HSPs)
chr7 (21-144)||(8200833-8200956)
chr7 (21-144)||(10873475-10873598)
chr7 (21-144)||(14335181-14335304)
chr7 (21-144)||(44788713-44788836)
chr7 (21-144)||(8710390-8710513)
chr7 (21-144)||(11234575-11234698)
chr7 (21-144)||(13688826-13688949)
chr7 (21-144)||(18587533-18587656)
chr7 (21-144)||(15158419-15158542)
chr7 (21-144)||(18180528-18180651)
chr7 (21-141)||(17703820-17703940)
chr7 (21-140)||(11550468-11550587)
chr7 (21-140)||(12690287-12690406)
chr7 (21-140)||(14957339-14957458)
chr7 (139-226)||(10873372-10873459)
chr7 (138-226)||(8710287-8710375)
chr7 (138-226)||(14335078-14335166)
chr7 (138-226)||(18587671-18587759)
chr7 (138-226)||(44788851-44788939)
chr7 (139-226)||(8200730-8200817)
chr7 (139-226)||(11234714-11234801)
chr7 (139-226)||(13688723-13688810)
chr7 (139-226)||(15158558-15158645)
chr7 (140-226)||(14149938-14150024)
chr7 (140-226)||(9591050-9591136)
chr7 (140-226)||(14957236-14957322)
chr7 (138-226)||(18180427-18180513)
chr7 (37-141)||(9591169-9591269)
chr7 (144-226)||(11550608-11550690)
chr7 (140-226)||(16726885-16726971)
chr7 (140-226)||(17703957-17704043)
chr7 (140-226)||(12690184-12690270)
chr7 (21-144)||(15146285-15146408)
chr7 (170-218)||(15146416-15146464)
chr7 (21-128)||(15627309-15627416)
chr7 (37-78)||(14149864-14149905)
chr7 (140-206)||(14042397-14042463)
chr7 (23-141)||(14042482-14042600)
chr7 (140-206)||(14352427-14352493)
chr7 (23-141)||(14352512-14352630)
[»] chr6 (48 HSPs)
chr6 (21-144)||(25115212-25115335)
chr6 (21-144)||(29589937-29590060)
chr6 (21-144)||(2872300-2872423)
chr6 (21-144)||(22827853-22827976)
chr6 (21-144)||(27190096-27190219)
chr6 (21-144)||(27259021-27259144)
chr6 (21-144)||(28312290-28312413)
chr6 (21-144)||(28260695-28260818)
chr6 (21-144)||(28285098-28285221)
chr6 (21-144)||(28339444-28339567)
chr6 (21-144)||(16574550-16574673)
chr6 (21-144)||(16620707-16620830)
chr6 (21-144)||(24293280-24293403)
chr6 (21-141)||(27559470-27559590)
chr6 (138-226)||(28312187-28312275)
chr6 (138-226)||(28260833-28260921)
chr6 (138-226)||(28284995-28285083)
chr6 (138-226)||(28339582-28339670)
chr6 (21-144)||(19867347-19867470)
chr6 (139-226)||(29590076-29590163)
chr6 (139-226)||(2872439-2872527)
chr6 (138-226)||(27189993-27190081)
chr6 (138-226)||(27259159-27259247)
chr6 (21-144)||(5836726-5836849)
chr6 (139-226)||(16574447-16574534)
chr6 (139-226)||(16620846-16620933)
chr6 (139-226)||(22827992-22828079)
chr6 (139-226)||(25115109-25115196)
chr6 (140-226)||(16961120-16961206)
chr6 (140-226)||(27559607-27559693)
chr6 (21-141)||(16925141-16925261)
chr6 (139-226)||(24293419-24293506)
chr6 (140-226)||(5836866-5836952)
chr6 (140-226)||(16925278-16925364)
chr6 (140-226)||(19867244-19867330)
chr6 (140-226)||(22436426-22436512)
chr6 (32-141)||(18405445-18405554)
chr6 (21-141)||(23081083-23081203)
chr6 (21-144)||(22436529-22436652)
chr6 (21-134)||(20135634-20135747)
chr6 (21-134)||(22197122-22197235)
chr6 (23-141)||(18182868-18182986)
chr6 (140-218)||(18405582-18405660)
chr6 (154-226)||(20135531-20135603)
chr6 (154-226)||(22197266-22197338)
chr6 (59-141)||(23085326-23085408)
chr6 (154-226)||(18183019-18183091)
chr6 (154-226)||(23080980-23081052)
[»] chr3 (62 HSPs)
chr3 (21-144)||(12889124-12889247)
chr3 (21-144)||(13255105-13255228)
chr3 (21-144)||(16638188-16638311)
chr3 (21-144)||(20059646-20059769)
chr3 (21-144)||(43165090-43165213)
chr3 (23-144)||(48427864-48427985)
chr3 (21-144)||(3688358-3688481)
chr3 (21-144)||(5422522-5422645)
chr3 (21-144)||(10008015-10008138)
chr3 (21-144)||(15586984-15587107)
chr3 (21-144)||(15713648-15713771)
chr3 (21-144)||(16754293-16754416)
chr3 (21-144)||(26791005-26791128)
chr3 (21-144)||(6603151-6603273)
chr3 (21-144)||(15345837-15345960)
chr3 (21-144)||(15400109-15400232)
chr3 (21-144)||(53382610-53382733)
chr3 (21-144)||(10908625-10908748)
chr3 (21-144)||(15358498-15358621)
chr3 (21-140)||(24185605-24185724)
chr3 (21-144)||(15065486-15065609)
chr3 (21-115)||(26190937-26191031)
chr3 (138-226)||(3688255-3688343)
chr3 (23-133)||(16804550-16804660)
chr3 (138-226)||(5422660-5422748)
chr3 (138-226)||(6603048-6603136)
chr3 (138-226)||(12889021-12889109)
chr3 (138-226)||(13255002-13255090)
chr3 (138-226)||(20059784-20059872)
chr3 (138-226)||(48427759-48427847)
chr3 (139-226)||(10908522-10908609)
chr3 (139-226)||(15587123-15587210)
chr3 (139-226)||(16638085-16638172)
chr3 (139-226)||(26791144-26791231)
chr3 (139-226)||(43164987-43165074)
chr3 (21-141)||(14579003-14579123)
chr3 (138-226)||(15345975-15346063)
chr3 (21-141)||(16694579-16694699)
chr3 (138-226)||(16754431-16754519)
chr3 (139-226)||(10007912-10007999)
chr3 (139-226)||(15713787-15713874)
chr3 (140-226)||(16804679-16804765)
chr3 (138-212)||(26191046-26191120)
chr3 (23-136)||(14874168-14874281)
chr3 (138-226)||(53382748-53382836)
chr3 (139-226)||(15358395-15358482)
chr3 (139-226)||(15400248-15400335)
chr3 (21-141)||(12843698-12843818)
chr3 (21-141)||(15262045-15262165)
chr3 (140-226)||(16694476-16694562)
chr3 (140-226)||(24185502-24185588)
chr3 (21-141)||(17492266-17492386)
chr3 (140-209)||(15065400-15065469)
chr3 (140-226)||(14874300-14874386)
chr3 (140-215)||(18437463-18437538)
chr3 (140-226)||(17492163-17492249)
chr3 (154-226)||(15261942-15262014)
chr3 (140-215)||(14579140-14579215)
chr3 (43-140)||(47126391-47126488)
chr3 (43-140)||(10408415-10408512)
chr3 (154-226)||(12843849-12843921)
chr3 (22-78)||(14291179-14291235)
[»] chr2 (49 HSPs)
chr2 (21-144)||(9338009-9338132)
chr2 (21-144)||(9486643-9486766)
chr2 (21-144)||(16983667-16983790)
chr2 (21-144)||(17001427-17001550)
chr2 (21-144)||(24712461-24712584)
chr2 (21-144)||(27220443-27220566)
chr2 (21-144)||(44383463-44383586)
chr2 (21-144)||(11351604-11351727)
chr2 (21-144)||(21142934-21143057)
chr2 (21-144)||(22323235-22323358)
chr2 (21-143)||(24874644-24874766)
chr2 (21-144)||(10871277-10871400)
chr2 (21-144)||(24264797-24264920)
chr2 (21-144)||(27373696-27373819)
chr2 (21-144)||(41606279-41606401)
chr2 (21-141)||(24677914-24678034)
chr2 (139-226)||(21143073-21143160)
chr2 (138-226)||(16983564-16983652)
chr2 (138-226)||(17001324-17001412)
chr2 (138-226)||(22323373-22323461)
chr2 (21-141)||(23204741-23204861)
chr2 (21-141)||(24657554-24657674)
chr2 (37-141)||(45673908-45674012)
chr2 (139-226)||(9337906-9337993)
chr2 (139-226)||(9486540-9486627)
chr2 (139-226)||(10871174-10871261)
chr2 (139-226)||(24874782-24874869)
chr2 (141-226)||(27220340-27220425)
chr2 (21-141)||(23029357-23029477)
chr2 (21-137)||(24705382-24705498)
chr2 (138-226)||(24712358-24712446)
chr2 (138-226)||(27373593-27373681)
chr2 (138-226)||(44383601-44383689)
chr2 (139-226)||(41606417-41606504)
chr2 (140-226)||(24657691-24657777)
chr2 (140-226)||(24705515-24705601)
chr2 (139-226)||(24264694-24264781)
chr2 (32-144)||(21323159-21323271)
chr2 (21-141)||(23074290-23074410)
chr2 (21-141)||(23105624-23105744)
chr2 (140-226)||(24677811-24677897)
chr2 (140-226)||(21323299-21323385)
chr2 (140-200)||(11351744-11351804)
chr2 (21-141)||(22733670-22733790)
chr2 (140-226)||(23204638-23204724)
chr2 (140-226)||(23074187-23074273)
chr2 (141-226)||(22733808-22733893)
chr2 (140-198)||(23105761-23105819)
chr2 (187-226)||(11351800-11351839)
[»] chr1 (34 HSPs)
chr1 (21-144)||(16348020-16348143)
chr1 (21-144)||(51330917-51331040)
chr1 (21-144)||(33388454-33388577)
chr1 (21-144)||(19109179-19109302)
chr1 (21-144)||(41351093-41351216)
chr1 (21-144)||(21833113-21833236)
chr1 (21-141)||(17042443-17042563)
chr1 (138-226)||(16348158-16348246)
chr1 (138-226)||(41351231-41351319)
chr1 (138-226)||(21833010-21833098)
chr1 (139-226)||(19109076-19109163)
chr1 (49-144)||(20081801-20081896)
chr1 (139-226)||(21839658-21839745)
chr1 (21-144)||(24785282-24785405)
chr1 (139-226)||(51331056-51331143)
chr1 (140-226)||(24785422-24785508)
chr1 (138-226)||(33388592-33388680)
chr1 (21-116)||(21233184-21233279)
chr1 (21-141)||(16378905-16379025)
chr1 (140-224)||(22502854-22502938)
chr1 (64-144)||(21842066-21842146)
chr1 (37-141)||(429585-429689)
chr1 (140-226)||(17042580-17042666)
chr1 (21-107)||(22502751-22502837)
chr1 (21-141)||(21751748-21751868)
chr1 (140-226)||(21233296-21233382)
chr1 (21-68)||(21839761-21839808)
chr1 (154-224)||(22359823-22359893)
chr1 (154-215)||(21751656-21751717)
chr1 (140-224)||(21861938-21862022)
chr1 (43-140)||(38910255-38910352)
chr1 (163-215)||(16378813-16378865)
chr1 (154-226)||(20140791-20140863)
chr1 (43-131)||(12200382-12200470)
[»] scaffold0044 (4 HSPs)
scaffold0044 (21-144)||(3249-3372)
scaffold0044 (21-137)||(16985-17101)
scaffold0044 (139-226)||(3146-3233)
scaffold0044 (142-226)||(16882-16966)
[»] scaffold0028 (6 HSPs)
scaffold0028 (21-144)||(11294-11417)
scaffold0028 (21-144)||(17762-17885)
scaffold0028 (21-144)||(53552-53675)
scaffold0028 (139-226)||(53449-53536)
scaffold0028 (139-226)||(11191-11278)
scaffold0028 (139-226)||(17659-17746)
[»] scaffold0109 (4 HSPs)
scaffold0109 (21-144)||(40980-41103)
scaffold0109 (139-226)||(40877-40964)
scaffold0109 (21-141)||(13483-13603)
scaffold0109 (140-226)||(13620-13706)
[»] scaffold0010 (3 HSPs)
scaffold0010 (21-141)||(14249-14369)
scaffold0010 (21-141)||(4740-4860)
scaffold0010 (153-226)||(4637-4710)
[»] scaffold0079 (4 HSPs)
scaffold0079 (21-141)||(36323-36443)
scaffold0079 (140-226)||(28800-28886)
scaffold0079 (140-217)||(36229-36306)
scaffold0079 (21-62)||(28903-28944)
[»] scaffold0017 (4 HSPs)
scaffold0017 (21-141)||(17425-17545)
scaffold0017 (140-226)||(17562-17648)
scaffold0017 (21-144)||(195194-195317)
scaffold0017 (140-218)||(195334-195412)
[»] scaffold1459 (2 HSPs)
scaffold1459 (21-144)||(1388-1511)
scaffold1459 (140-226)||(1528-1614)
[»] scaffold0259 (2 HSPs)
scaffold0259 (21-140)||(8083-8202)
scaffold0259 (140-226)||(7980-8066)
[»] scaffold0080 (10 HSPs)
scaffold0080 (21-144)||(31708-31831)
scaffold0080 (21-144)||(37174-37297)
scaffold0080 (21-141)||(10597-10717)
scaffold0080 (21-141)||(13252-13372)
scaffold0080 (21-141)||(54462-54582)
scaffold0080 (141-226)||(31606-31691)
scaffold0080 (141-226)||(37072-37157)
scaffold0080 (140-226)||(10734-10820)
scaffold0080 (140-226)||(13389-13475)
scaffold0080 (140-215)||(54370-54445)
[»] scaffold1881 (1 HSPs)
scaffold1881 (21-145)||(835-959)
[»] scaffold0550 (2 HSPs)
scaffold0550 (21-144)||(10514-10637)
scaffold0550 (140-226)||(10654-10740)
[»] scaffold0181 (2 HSPs)
scaffold0181 (21-141)||(29287-29407)
scaffold0181 (140-226)||(29424-29510)
[»] scaffold0454 (2 HSPs)
scaffold0454 (139-226)||(9662-9749)
scaffold0454 (21-68)||(9765-9812)
[»] scaffold0102 (3 HSPs)
scaffold0102 (21-144)||(50701-50824)
scaffold0102 (140-218)||(50841-50919)
scaffold0102 (22-140)||(42524-42642)
[»] scaffold0413 (2 HSPs)
scaffold0413 (21-141)||(3426-3546)
scaffold0413 (140-226)||(3323-3409)
[»] scaffold0218 (2 HSPs)
scaffold0218 (21-141)||(25071-25191)
scaffold0218 (140-200)||(25208-25268)
[»] scaffold0177 (2 HSPs)
scaffold0177 (21-141)||(11715-11835)
scaffold0177 (140-226)||(11852-11938)
[»] scaffold0560 (2 HSPs)
scaffold0560 (139-226)||(8236-8323)
scaffold0560 (21-95)||(8146-8220)
[»] scaffold0081 (4 HSPs)
scaffold0081 (21-144)||(21429-21552)
scaffold0081 (21-144)||(36853-36976)
scaffold0081 (140-226)||(21326-21412)
scaffold0081 (140-226)||(36750-36836)
[»] scaffold0022 (6 HSPs)
scaffold0022 (21-144)||(35071-35193)
scaffold0022 (140-226)||(35210-35296)
scaffold0022 (21-141)||(41457-41577)
scaffold0022 (21-141)||(75177-75297)
scaffold0022 (140-226)||(41354-41440)
scaffold0022 (140-226)||(75074-75160)
[»] scaffold0540 (1 HSPs)
scaffold0540 (21-141)||(11239-11359)
[»] scaffold0476 (2 HSPs)
scaffold0476 (21-141)||(10611-10731)
scaffold0476 (140-200)||(10534-10594)
[»] scaffold0358 (4 HSPs)
scaffold0358 (21-141)||(8775-8895)
scaffold0358 (21-115)||(17971-18065)
scaffold0358 (140-192)||(8706-8758)
scaffold0358 (140-192)||(17902-17954)
[»] scaffold0282 (2 HSPs)
scaffold0282 (21-141)||(13838-13958)
scaffold0282 (154-226)||(13989-14061)
[»] scaffold0270 (4 HSPs)
scaffold0270 (21-141)||(6698-6818)
scaffold0270 (21-141)||(13828-13948)
scaffold0270 (140-215)||(6606-6681)
scaffold0270 (140-215)||(13736-13811)
[»] scaffold0042 (2 HSPs)
scaffold0042 (21-141)||(37179-37299)
scaffold0042 (140-226)||(37316-37402)
[»] scaffold0011 (2 HSPs)
scaffold0011 (21-141)||(23892-24012)
scaffold0011 (154-214)||(24043-24103)
[»] scaffold0501 (2 HSPs)
scaffold0501 (140-226)||(12385-12471)
scaffold0501 (21-144)||(12488-12611)
[»] scaffold0393 (2 HSPs)
scaffold0393 (25-115)||(15379-15469)
scaffold0393 (140-226)||(15490-15576)
[»] scaffold0215 (1 HSPs)
scaffold0215 (140-226)||(27991-28077)
[»] scaffold0410 (1 HSPs)
scaffold0410 (56-141)||(1-86)
[»] scaffold0342 (2 HSPs)
scaffold0342 (21-141)||(14625-14745)
scaffold0342 (154-215)||(14776-14837)
[»] scaffold0333 (2 HSPs)
scaffold0333 (21-141)||(18475-18595)
scaffold0333 (140-226)||(18372-18458)
[»] scaffold0243 (2 HSPs)
scaffold0243 (21-141)||(24304-24424)
scaffold0243 (140-225)||(24441-24526)
[»] scaffold0084 (2 HSPs)
scaffold0084 (21-141)||(8048-8168)
scaffold0084 (140-226)||(7945-8031)
[»] scaffold0074 (2 HSPs)
scaffold0074 (21-141)||(5938-6058)
scaffold0074 (140-215)||(5846-5921)
[»] scaffold0040 (4 HSPs)
scaffold0040 (21-141)||(17703-17823)
scaffold0040 (21-137)||(111270-111386)
scaffold0040 (160-226)||(17600-17666)
scaffold0040 (140-215)||(111403-111478)
[»] scaffold0012 (2 HSPs)
scaffold0012 (21-141)||(216779-216899)
scaffold0012 (154-226)||(216930-217002)
[»] scaffold0001 (3 HSPs)
scaffold0001 (21-141)||(495845-495965)
scaffold0001 (154-226)||(495742-495814)
scaffold0001 (145-197)||(441441-441493)
[»] scaffold0149 (2 HSPs)
scaffold0149 (140-226)||(551-637)
scaffold0149 (21-93)||(654-726)
[»] scaffold0130 (1 HSPs)
scaffold0130 (64-141)||(8140-8217)
[»] scaffold1423 (2 HSPs)
scaffold1423 (21-141)||(737-857)
scaffold1423 (154-226)||(888-960)
[»] scaffold0621 (2 HSPs)
scaffold0621 (21-141)||(4259-4379)
scaffold0621 (140-226)||(4156-4242)
[»] scaffold0423 (1 HSPs)
scaffold0423 (37-141)||(2622-2726)
[»] scaffold0278 (2 HSPs)
scaffold0278 (21-141)||(1277-1397)
scaffold0278 (140-226)||(1174-1260)
[»] scaffold0120 (2 HSPs)
scaffold0120 (21-141)||(13909-14029)
scaffold0120 (140-200)||(8770-8830)
[»] scaffold0023 (6 HSPs)
scaffold0023 (21-141)||(151906-152026)
scaffold0023 (21-98)||(1907-1984)
scaffold0023 (154-226)||(151803-151875)
scaffold0023 (140-215)||(47460-47535)
scaffold0023 (169-226)||(2030-2087)
scaffold0023 (83-140)||(47342-47399)
[»] scaffold1985 (2 HSPs)
scaffold1985 (140-226)||(68-154)
scaffold1985 (21-71)||(1-51)
[»] scaffold0293 (1 HSPs)
scaffold0293 (32-141)||(15258-15367)
[»] scaffold0006 (2 HSPs)
scaffold0006 (32-141)||(104063-104172)
scaffold0006 (140-226)||(103949-104035)
[»] scaffold0324 (3 HSPs)
scaffold0324 (21-141)||(12573-12693)
scaffold0324 (140-226)||(12710-12795)
scaffold0324 (72-141)||(1865-1934)
[»] scaffold0312 (1 HSPs)
scaffold0312 (37-141)||(861-965)
[»] scaffold0075 (2 HSPs)
scaffold0075 (21-141)||(55829-55949)
scaffold0075 (154-226)||(55980-56052)
[»] scaffold0993 (3 HSPs)
scaffold0993 (21-140)||(807-926)
scaffold0993 (155-226)||(604-675)
scaffold0993 (21-92)||(707-778)
[»] scaffold0575 (2 HSPs)
scaffold0575 (21-139)||(4408-4526)
scaffold0575 (140-214)||(4317-4391)
[»] scaffold0031 (1 HSPs)
scaffold0031 (149-226)||(52430-52507)
[»] scaffold0529 (1 HSPs)
scaffold0529 (21-140)||(4913-5032)
[»] scaffold0077 (1 HSPs)
scaffold0077 (55-141)||(57973-58059)
[»] scaffold0908 (1 HSPs)
scaffold0908 (140-226)||(273-361)
[»] scaffold0114 (2 HSPs)
scaffold0114 (49-134)||(17714-17799)
scaffold0114 (140-226)||(17839-17925)
[»] scaffold1615 (1 HSPs)
scaffold1615 (155-226)||(1244-1315)
[»] scaffold0647 (1 HSPs)
scaffold0647 (140-226)||(7155-7241)
[»] scaffold0138 (2 HSPs)
scaffold0138 (140-226)||(6583-6669)
scaffold0138 (21-98)||(6489-6566)
[»] scaffold0122 (2 HSPs)
scaffold0122 (32-116)||(40889-40973)
scaffold0122 (140-226)||(41001-41087)
[»] scaffold0443 (1 HSPs)
scaffold0443 (43-140)||(11656-11753)
[»] scaffold0056 (1 HSPs)
scaffold0056 (38-141)||(1242-1345)
[»] scaffold0331 (1 HSPs)
scaffold0331 (140-197)||(15475-15532)
[»] scaffold1288 (1 HSPs)
scaffold1288 (22-134)||(221-333)


Alignment Details
Target: chr4 (Bit Score: 108; Significance: 2e-54; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 19634932 - 19635055
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  19634932 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 19635031  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    ||||||||||||||||||||||||    
T  19635032 ccgaacatagacaaaggacatttc 19635055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 12479396 - 12479519
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  12479396 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 12479495  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  12479496 ccaaacatagacaaaggacatttc 12479519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 16234208 - 16234085
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  16234208 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 16234109  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  16234108 ccaaacatagacaaaggacatttc 16234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 17092365 - 17092242
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  17092365 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 17092266  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  17092265 ccaaacatagacaaaggacatttc 17092242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 40475836 - 40475959
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  40475836 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 40475935  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  40475936 ccaaacatagacaaaggacatttc 40475959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 8389208 - 8389331
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  8389208 acaattaataagaacgtggttgtactctaaccagttcattcccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 8389307  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  8389308 ccaaacatagacaaaggacatttc 8389331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 19776009 - 19775886
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||    
T  19776009 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcgaaatcacga 19775910  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  19775909 ccaaacatagacaaaggacatttc 19775886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 23958543 - 23958666
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  23958543 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 23958642  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  23958643 ccaaacatagacaaaggacatttc 23958666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 8050839 - 8050716
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  8050839 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 8050740  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || ||||||||||||||| |||||    
T  8050739 ccaaacatagacaaaggaaatttc 8050716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 14301195 - 14301072
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  14301195 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 14301096  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || || ||||||||||||||||||    
T  14301095 ccaaatatagacaaaggacatttc 14301072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 27714132 - 27714255
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  27714132 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 27714231  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||| ||||||||    
T  27714232 ccaaacatagacaaaagacatttc 27714255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 16251066 - 16250946
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  16251066 acaattgatatgaacatggttgtactctaaccaatttatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 16250967  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  16250966 ccaaacatagacaaaggacat 16250946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 14683363 - 14683482
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||| ||||| ||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||    
T  14683363 acaattaatatgaacatggttgtactccaaccaattcattcccagaatcacatccatactgctcaaaggtagacaaactaaatccatttcaaaatcacga 14683462  T
Q  121 ccgaacatagacaaaggaca 140  Q
    || |||||||||||||||||    
T  14683463 ccaaacatagacaaaggaca 14683482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 18224651 - 18224542
Alignment:
Q  32 gaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacataga 131  Q
    |||| ||||||||||||||||| |||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  18224651 gaacatggttgtactctaaccaattcatacccaaaataacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacgaccaaacataga 18224552  T
Q  132 caaaggacat 141  Q
    ||||||||||    
T  18224551 caaaggacat 18224542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 12479381 - 12479293
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  12479381 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 12479293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 16234223 - 16234311
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  16234223 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 16234311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 17092380 - 17092468
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  17092380 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 17092468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 8389192 - 8389105
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  8389192 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 8389105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 14162266 - 14162385
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||  |||||||||||| |||||||||||||||||||||||| |||    
T  14162266 acaattaataagaacatggttgtactctaaccagttcatgccaagaatcacatccattccactcaaaggtaaacaaactaaatccatttcaaaatcacga 14162365  T
Q  121 ccgaacatagacaaaggaca 140  Q
     |  ||||||||||||||||    
T  14162366 tcatacatagacaaaggaca 14162385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 23958527 - 23958440
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  23958527 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 23958440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 27714115 - 27714029
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  27714115 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 27714029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 19776024 - 19776112
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||    
T  19776024 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacagtatcttgatgt 19776112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 8050855 - 8050942
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||||    
T  8050855 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacacgacggtatcttgatgt 8050942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 14301211 - 14301298
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  14301211 catttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 14301298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 19634916 - 19634829
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  19634916 catttctcttccgtcgaagaggaaagtggtgcaaagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 19634829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 40475820 - 40475733
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  40475820 catttctcttccgtcgaagaggaaagtggtgcagagtttgtatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 40475733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 16352763 - 16352849
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||    
T  16352763 atttctcttccgtcgaagaggaaagtggtgcagagttcttgtctactaagcagctgaagcaactggaacgcgatggtattttgatgt 16352849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 14188309 - 14188422
Alignment:
Q  28 ataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaaca 127  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||| |||  |||||||||||| |||||||||||||||||||||||| ||| | ||||    
T  14188309 ataagaacatggttgtactctaaccagttcataccaagaatcacattcattccactcaaaggtaaacaaactaaatccatttcaaaatcacgatcaaaca 14188408  T
Q  128 tagacaaaggacat 141  Q
     |||||||||||||    
T  14188409 aagacaaaggacat 14188422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 14696897 - 14697017
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||||||||| ||||||||||| |||    
T  14696897 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaactaaatcaatttcaaaatctcga 14696996  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||| ||||||    
T  14696997 ccaaacatagacaagggacat 14697017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 15145107 - 15144985
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| || ||||||||| ||||||||||| | || |||||||||||||||||||||||||||||||| |||    
T  15145107 acaattaatgtgaacatggttgtattccaaccagtttatacccaga-tcacatccataccgcttaaaggtagacaaactaaatccatttcaaaatcacga 15145009  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  15145008 ccaaacatagacaaaggacatttc 15144985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 16219027 - 16219146
Alignment:
Q  22 caattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgac 121  Q
    ||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||| ||||| ||||||||||| ||||    
T  16219027 caattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaaccaaatcaatttcaaaatcacgac 16219126  T
Q  122 cgaacatagacaaaggacat 141  Q
    | ||||||||||||||||||    
T  16219127 caaacatagacaaaggacat 16219146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 16222347 - 16222466
Alignment:
Q  22 caattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgac 121  Q
    ||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||| ||||| ||||||||||| ||||    
T  16222347 caattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaaccaaatcaatttcaaaatcacgac 16222446  T
Q  122 cgaacatagacaaaggacat 141  Q
    | ||||||||||||||||||    
T  16222447 caaacatagacaaaggacat 16222466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 18224679 - 18224765
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||| |||||||    
T  18224679 atttctcttccgttgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 18224765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 14683346 - 14683260
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |||||||| |||||||    
T  14683346 atttctcttccgccgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 14683260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 15145125 - 15145212
Alignment:
Q  140 atttctcttccgtcgaagaggaaagt-ggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| |||||||||||||||||| ||||||||||| || ||||| ||||||||||||||||| |||||||||||||| |||||||    
T  15145125 atttctcctccgtcgaagaggaaagtaggtgcagagttcttgtctaccaagcagctgaagcaactggaacgcgatggtattttgatgt 15145212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 16251 - 16131
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||||| |||||| |||||||| || || ||||||||| |||||||||||| |||||| ||||| ||||  ||||| |||    
T  16251 acaattaatgtgaacatggttgtactttaaccagttcataccaaggattacatccataccactcaaaggtaaacaaaccaaatcaatttagaaatcacga 16152  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  16151 tcaaacatagacaaaggacat 16131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 16350725 - 16350650
Alignment:
Q  66 aatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggacat 141  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||| ||||| |||||  |||||||||||||||||    
T  16350725 aatcacatccataccgctcaaaggtagacaaactagatccatttcgaaatcacgaccagacatagacaaaggacat 16350650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 16251083 - 16251169
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||||||||||||||||| ||| |||||||  ||||||||||| | ||||| |||||||| |||||||    
T  16251083 atttctcttccgctgaagaggaaagtggtgcagagttcttaactactaaatagctgaagcaaatggaacgtgatggtattttgatgt 16251169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 22632479 - 22632393
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||||||||||| |||||||||||| |||||||  ||||||| |||||||| |||||||    
T  22632479 atttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagttgaagcagttagaacgtgatggtattttgatgt 22632393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 16282 - 16354
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| ||| ||||||| |||||||| |||||||||||  ||||||| |||||||| |||||||    
T  16282 gaagaggaaagtggcgcaaagtttttgtctactaaacagctgaagcagttagaacgtgatggtattttgatgt 16354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 16219009 - 16218923
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| |||||||| || ||||  ||||||||||||||| ||||||| ||||| || |||||||    
T  16219009 atttctcttctgctgaagaggaaagtggcgcagagttcttgtctatcaagcagctgaagcaattagaacgtgatggaattttgatgt 16218923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 16222329 - 16222243
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| |||||||| || ||||  ||||||||||||||| ||||||| ||||| || |||||||    
T  16222329 atttctcttctgctgaagaggaaagtggcgcagagttcttgtctatcaagcagctgaagcaattagaacgtgatggaattttgatgt 16222243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 14188271 - 14188199
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||| |||||||| |  ||||| || ||||||||||||||||||||||||||||| ||||| || |||||||    
T  14188271 gaagaagaaagtggagtggagttcttgtctactaagcagctgaagcaactagaacgagatggaattttgatgt 14188199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 14696866 - 14696794
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| ||| | || || ||||||||||||||||||||| ||||||| ||||| || |||||||    
T  14696866 gaagaggaaagtggcgcaaaattcttttctactaagcagctgaagcaattagaacgtgatggaattttgatgt 14696794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 16352746 - 16352697
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatca 70  Q
    |||||||||| |||| ||||||||||||||||| |||||||| |||||||    
T  16352746 acaattaatatgaacatggttgtactctaaccaattcataccaagaatca 16352697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 29450991 - 29450894
Alignment:
Q  43 tactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggaca 140  Q
    ||||||||||| |||||||| | ||||||||||||| |  |||| || |||||||||||||| ||  ||||||| | ||| |||||||| | ||||||    
T  29450991 tactctaaccaattcataccaaaaatcacatccatacccgtcaacggcagacaaactaaatcaatcacaaaatctctaccaaacatagatataggaca 29450894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 14848612 - 14848684
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| ||| |  | || ||||||||||||||||||||| ||||||| ||||| || |||||||    
T  14848612 gaagaggaaagtggcgcaaaactcttgtctactaagcagctgaagcaattagaacgtgatggaattttgatgt 14848684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 14162235 - 14162163
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||| ||||| || | |||||| || ||||| ||||| ||||||||||||||||| ||||| || |||||||    
T  14162235 gaagaagaaagcggagtagagttcttgtctaccaagcaactgaagcaactagaacgtgatggaattttgatgt 14162163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 22350649 - 22350770
Alignment:
Q  23 aattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgacc 122  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  22350649 aattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcgcgacc 22350748  T
Q  123 gaacatagacaaaggacatttc 144  Q
     |||||||||||||||||||||    
T  22350749 aaacatagacaaaggacatttc 22350770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 16359230 - 16359353
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  16359230 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 16359329  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  16359330 ccaaacatagacaaaggacatttc 16359353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 27521134 - 27521257
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  27521134 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 27521233  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  27521234 ccaaacatagacaaaggacatttc 27521257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 27666148 - 27666025
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  27666148 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 27666049  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  27666048 ccaaacatagacaaaggacatttc 27666025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 34569222 - 34569345
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  34569222 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 34569321  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  34569322 ccaaacatagacaaaggacatttc 34569345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 40711508 - 40711631
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  40711508 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 40711607  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  40711608 ccaaacatagacaaaggacatttc 40711631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 41773570 - 41773693
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41773570 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcgcga 41773669  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || ||||||||||||| |||||||    
T  41773670 ccaaacatagacaaagtacatttc 41773693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 14997397 - 14997274
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  14997397 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 14997298  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  14997297 ccaaacatagacaaaggacatttc 14997274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 22330545 - 22330422
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  22330545 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 22330446  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  22330445 ccaaacatagacaaaggacatttc 22330422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 27613084 - 27613207
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||    
T  27613084 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaagggtagacaaactaaatccatttcaaaatcacga 27613183  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  27613184 ccaaacatagacaaaggacatttc 27613207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 29473731 - 29473608
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  29473731 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 29473632  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  29473631 ccaaacatagacaaaggacatttc 29473608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 19772688 - 19772811
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  19772688 acaattaataagaacgtggttgtactctaaccagttcatacccaggatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 19772787  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  19772788 ccaaacatagacaaaggacatttc 19772811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 22137396 - 22137519
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  22137396 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 22137495  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||| ||||||||||||||    
T  22137496 ccaaacataaacaaaggacatttc 22137519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 37289154 - 37289031
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  37289154 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 37289055  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||| ||||||||||||||||    
T  37289054 ccaaacaaagacaaaggacatttc 37289031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 27683058 - 27682935
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||||||| |||||||||||||| ||||| |||    
T  27683058 acaattaataagaacgtggttgtactctaaacagttcatacccagaatcacatccataccgctcaaaggtagacacactaaatccatttcgaaatcacga 27682959  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  27682958 ccaaacatagacaaaggacatttc 27682935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 20803326 - 20803448
Alignment:
Q  22 caattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgac 121  Q
    ||||| ||| |||| ||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  20803326 caattgatatgaacatggttgtactctaaccacttcataccaagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacgac 20803425  T
Q  122 cgaacatagacaaaggacatttc 144  Q
    | |||||||||||||||||||||    
T  20803426 caaacatagacaaaggacatttc 20803448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 18781842 - 18781962
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| |||    
T  18781842 acaattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaacttaatccatttcaaaatcacga 18781941  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  18781942 ccaaacatagacaaaggacat 18781962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 21882502 - 21882622
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||| | || ||||||||||||||||||||||| |||||||| |||    
T  21882502 acaattaatatgaacatggttgtactctaaccaattcataccaagaatcacatccataccgcttaaaggtagacaaactaaatccatctcaaaatcacga 21882601  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  21882602 ccaaacatagacaaaggacat 21882622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 27613069 - 27612981
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  27613069 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 27612981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 27666163 - 27666251
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  27666163 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 27666251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 40711493 - 40711405
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  40711493 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 40711405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 41773555 - 41773467
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  41773555 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 41773467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 16359214 - 16359127
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  16359214 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 16359127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 22330561 - 22330648
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  22330561 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 22330648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 22350631 - 22350544
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  22350631 catttctcttccgtcgaagaggagagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 22350544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 34569206 - 34569119
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  34569206 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 34569119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 19772673 - 19772585
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||||    
T  19772673 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagttgaagcaactggaacgcgacggtatcttgatgt 19772585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 21343072 - 21342952
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| |  |||| |||| |||||||||||||||||||||||| |||    
T  21343072 acaattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgttcaatggtatacaaactaaatccatttcaaaatcacga 21342973  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  21342972 tcaaacatagacaaaggacat 21342952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 37289169 - 37289257
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  37289169 acatttctcttccgtcgaagaggaaagtggtgtagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 37289257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 22137380 - 22137293
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||    
T  22137380 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctaccaagcagctgaagcaactggaacgcgacggtatcttgatgt 22137293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 27521118 - 27521031
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  27521118 catttctcttccgtcgaagaggaaagtggcgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 27521031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 29473747 - 29473834
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| |||||||    
T  29473747 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacgatatcttgatgt 29473834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 26736385 - 26736265
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| ||||| || || |||||||||||| |||||||||||| |||||| ||||| ||||||||||| |||    
T  26736385 acaattaatatgaacatggttgtactctaaccagttcattccaaggatcacatccataccactcaaaggtaaacaaaccaaatcaatttcaaaatcacga 26736286  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  26736285 tcaaacatagacaaaggacat 26736265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 14997413 - 14997500
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||  |||| |||||||    
T  14997413 catttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacagtatcttgatgt 14997500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 20803308 - 20803222
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| |||||||    
T  20803308 atttctcttccgtcgaagaggaaagtggtgcagagttcttatctaccaagcagctgaagcaactggaacgcgaaggtatcttgatgt 20803222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 25429149 - 25429269
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| ||||| || |||||||| |||    
T  25429149 acaattaatgtgaacatggttgtactctaaccagttcataccaagaattacatccataccactcaaaggtagacaaaccaaatcaatctcaaaatcacga 25429248  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||| ||||||    
T  25429249 tcaaacatagacaagggacat 25429269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 18781825 - 18781739
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||| |||||||    
T  18781825 atttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 18781739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 27683075 - 27683161
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| | ||||| |||||||    
T  27683075 atttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgaaggaactggaacgcaacggtatcttgatgt 27683161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 21336952 - 21336832
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||| | || || |||||||||||||||    
T  21336952 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaatccaagtcaatttcaaaatcgcga 21336853  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || |||||||||||| |||||    
T  21336852 ccaaacatagacaaaagacat 21336832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 23473923 - 23474043
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || || |||||  |||||||||||| |||||| || || ||||||||||| |||    
T  23473923 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacgtccattccactcaaaggtaaacaaaccaagtcaatttcaaaatctcga 23474022  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  23474023 ccaaacatagacaaaggacat 23474043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 21343089 - 21343167
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtat 218  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  21343089 atttctattccgttgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtat 21343167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 23525867 - 23525938
Alignment:
Q  73 tccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggacatttc 144  Q
    |||||| | |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  23525867 tccataccgctcaaaggtagacaaactaaatccatctcaaaatcacgaccaaacatagacaaaggacatttc 23525938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 21882485 - 21882399
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| |||||| | |||||||||||||||||||| || ||||| ||||||||||||||||| ||||| |||||||| |||||||    
T  21882485 atttctcctccgtctaggaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactggaacgtgatggtattttgatgt 21882399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 25429132 - 25429046
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||||||||||| ||||| ||||||||||||||  ||||||| |||||||| |||||||    
T  25429132 atttctcttctgctgaagaggaaagtggcgcagagtttttgtctaccaagcagctgaagcagttagaacgtgatggtattttgatgt 25429046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 23473892 - 23473831
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    ||||| |||||||||||||| || || ||||||||||||||||||||| ||||||| |||||    
T  23473892 gaagaagaaagtggtgcagaattcttgtctactaagcagctgaagcaattagaacgtgatgg 23473831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 21336983 - 21337043
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatg 214  Q
    ||||| |||||||| |||||||| || ||||||||||||||||||||| ||||||| ||||    
T  21336983 gaagaagaaagtggcgcagagttcttgtctactaagcagctgaagcaattagaacgtgatg 21337043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 26736402 - 26736488
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||| | ||||| ||||  ||||||||||||||| ||||||| | ||| || |||||||    
T  26736402 atttctcttctgctgaagaggaaagtggcgcaaaatttttgtctatgaagcagctgaagcaattagaacgtggtggaattttgatgt 26736488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 20311601 - 20311697
Alignment:
Q  44 actctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggaca 140  Q
    |||| ||||| |||||||| || |||||||||||| ||||||| |  | ||| ||||| |||| | ||||||| | ||| ||||| |||||||||||    
T  20311601 actccaaccagttcatacctagtatcacatccataccactcaacgacaaacagactaagtccactgcaaaatctctaccaaacatcgacaaaggaca 20311697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 22505406 - 22505474
Alignment:
Q  38 ggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatcca 106  Q
    |||| ||||||||||| ||||| || | ||||||||||||| |  |||| |||| ||||||||||||||    
T  22505406 ggttatactctaaccaattcattccaaaaatcacatccatacccgtcaacggtaaacaaactaaatcca 22505474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 10193 - 10316
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  10193 acaattaataaaaacgtggttgtactctaaccagttcatacccagaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 10292  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  10293 ccaaacatagacaaaggacatttc 10316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 10177 - 10090
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||    
T  10177 catttctcttccctcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactgggacgcgatggtatcttgatgt 10090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 22072 - 22195
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  22072 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 22171  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  22172 ccaaacatagacaaaggacatttc 22195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 22056 - 21969
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  22056 catttctcttccgtcgaaaaggaaagtggtgcagagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 21969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 6e-52; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 17671941 - 17671818
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  17671941 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 17671842  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  17671841 ccaaacatagacaaaggacatttc 17671818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 19115262 - 19115385
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  19115262 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 19115361  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  19115362 ccaaacatagacaaaggacatttc 19115385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 18859439 - 18859562
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| |||    
T  18859439 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacttccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 18859538  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  18859539 ccaaacatagacaaaggacatttc 18859562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 20016182 - 20016059
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||    
T  20016182 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaacccatttcaaaatcacga 20016083  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  20016082 ccaaacatagacaaaggacatttc 20016059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 19481991 - 19481868
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||    
T  19481991 acaattaataagaacgtgattgtactctaaccagttcatacccagaatcacatccataccactcaaaggtaggcaaactaaatccatttcaaaatcacga 19481892  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    |  |||||||||||||||||||||    
T  19481891 ctaaacatagacaaaggacatttc 19481868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 22126878 - 22126755
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||| |||||||||||||||||||||||| ||||| |||    
T  22126878 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccgctcagaggtagacaaactaaatccatttcgaaatcacga 22126779  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  22126778 ccaaacatagacaaaggacatttc 22126755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 22129536 - 22129416
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  22129536 acaattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 22129437  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  22129436 ccaaacatagacaaaggacat 22129416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 30311063 - 30310943
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  30311063 acaattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 30310964  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  30310963 ccaaacatagacaaaggacat 30310943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 22118094 - 22117971
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| | |||| |||||||||||||||||||||||| ||||| |||    
T  22118094 acaattaataaaaatgtggttgtactctaaccagttcatacccagaatcacatccataccgctcagaggtagacaaactaaatccatttcgaaatcacga 22117995  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  22117994 ccaaacatagacaaaggacatttc 22117971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 32603007 - 32603127
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | |    
T  32603007 acaattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacaa 32603106  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  32603107 ccaaacatagacaaaggacat 32603127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 19482006 - 19482094
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  19482006 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 19482094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 17671956 - 17672044
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  17671956 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 17672044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 19115247 - 19115159
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  19115247 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 19115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 20016197 - 20016285
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  20016197 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 20016285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 22042689 - 22042809
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| |||||||| |||||||| |||||||| ||||||||||||||| |  |||||||||||||||||||||||||||||||||| |||    
T  22042689 acaattgatatgaacatggttgtattctaaccaattcatacctagaatcacatccataccgttcaaaggtagacaaactaaatccatttcaaaatcacga 22042788  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  22042789 ccaaacatagacaaaggacat 22042809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 15536245 - 15536364
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| ||| |||||| |||||||| |||| | ||||||||||||||||||||||||||||||||||| |||    
T  15536245 acaattaatatgaacatggttgtactctaaccaattcgtacccaaaatcacattcataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 15536344  T
Q  121 ccgaacatagacaaaggaca 140  Q
    || || ||||||||||||||    
T  15536345 ccaaatatagacaaaggaca 15536364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 19980829 - 19980952
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| |||||||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| |||    
T  19980829 acaattaatgtgaacatggttgtattccaaccagttcatacccagaatcacatccataccgctcaagggtagacaaactaaatccatctcaaaatcacga 19980928  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  19980929 ccaaacatagacaaaggacatttc 19980952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 22126894 - 22126981
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  22126894 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 22126981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 18859424 - 18859336
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| |||||||    
T  18859424 acatttctcttccgtcgaagaggaaagtggtgcagagtttttgtcaactaagcagctgaagcaactggaacgcgatggtatcttgatgt 18859336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 21164457 - 21164337
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||| || ||||| |||    
T  21164457 acaattaatgtgaacatggttgtattccaaccagttcatacccagaatcacatccataccactcaaaggtagacaaactaagtccatctcgaaatcacga 21164358  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  21164357 ccaaacatagacaaaggacat 21164337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 22118110 - 22118197
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  22118110 catttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 22118197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 21391778 - 21391660
Alignment:
Q  23 aattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgacc 122  Q
    |||||||  |||| |||||||| || ||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||| |    
T  21391778 aattaatgtgaacatggttgtattccaaccagttcatacccagaatcacatccataccactcaaaggtagaaaaactaaatccatctcaaaatcacgatc 21391679  T
Q  123 gaacatagacaaaggacat 141  Q
     ||||||||||||||||||    
T  21391678 aaacatagacaaaggacat 21391660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 21781104 - 21780986
Alignment:
Q  23 aattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgacc 122  Q
    |||||||  |||| |||||||| || ||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||| |    
T  21781104 aattaatgtgaacatggttgtattccaaccagttcatacccagaatcacatccataccactcaaaggtagaaaaactaaatccatctcaaaatcacgatc 21781005  T
Q  123 gaacatagacaaaggacat 141  Q
     ||||||||||||||||||    
T  21781004 aaacatagacaaaggacat 21780986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 21786272 - 21786154
Alignment:
Q  23 aattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgacc 122  Q
    |||||||  |||| |||||||| || ||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||| |    
T  21786272 aattaatgtgaacatggttgtattccaaccagttcatacccagaatcacatccataccactcaaaggtagaaaaactaaatccatctcaaaatcacgatc 21786173  T
Q  123 gaacatagacaaaggacat 141  Q
     ||||||||||||||||||    
T  21786172 aaacatagacaaaggacat 21786154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 22030965 - 22031085
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||| ||||||||| | || ||| |||||||||||||||||||||| |||||  ||    
T  22030965 acaattgatatgaacatggttgtactctaaccaattcatacccagaattacatccataccgcttaaatgtagacaaactaaatccatttcgaaatcatga 22031064  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  22031065 ccaaacatagacaaaggacat 22031085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 22246352 - 22246232
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||| ||||| |||| ||||||||||||||||| |||||||| || || |||||||| ||||||||||||| |||||| ||||  ||||||||||| |||    
T  22246352 acaactaatatgaacatggttgtactctaaccaattcataccaaggattacatccatttcactcaaaggtaaacaaaccaaattaatttcaaaatctcga 22246253  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  22246252 ccaaacatagacaaaggacat 22246232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 22375372 - 22375252
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||| ||||| ||||||||||| | |    
T  22375372 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaaccaaatcaatttcaaaatctcta 22375273  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  22375272 ccaaacatagacaaaggacat 22375252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 22989907 - 22990027
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||| |||||||||||| |||||| || || ||||||||||| |||    
T  22989907 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccataccactcaaaggtaaacaaaccaagtcaatttcaaaatcacga 22990006  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||| ||||||    
T  22990007 ccaaacatagacaagggacat 22990027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 15536228 - 15536142
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||| |||||||    
T  15536228 atttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 15536142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 30311080 - 30311166
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||| |||||||    
T  30311080 atttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 30311166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 21253807 - 21253927
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || |||||  ||||||| |||||||||| |||| ||||||||||||||||||| |||||||| |||||||| |||    
T  21253807 acaattaatgtgaacatggttgtattccaaccagctcataccaagaatcacatgcataccactcaaaggtagacaaaccaaatccatctcaaaatcacga 21253906  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  21253907 tcaaacatagacaaaggacat 21253927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 22523408 - 22523528
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||| |||||||||||| |||||| ||||| |||||||||||  ||    
T  22523408 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccataccactcaaaggtaaacaaaccaaatcaatttcaaaatcaaga 22523507  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || |||||||| |||| ||||    
T  22523508 ccaaacatagaaaaagaacat 22523528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 19980812 - 19980726
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||| |||||||| |||||||    
T  19980812 atttctcctccgtcgaagaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactggaacgggatggtattttgatgt 19980726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 22042672 - 22042586
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||||| | |||||||||||||| |||||||    
T  22042672 atttctcttccgctgaagaggaaagtggtgcagagttcttaactactaagcagctgaagcaaatggaacgcgatggtattttgatgt 22042586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 22129553 - 22129639
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||||||| |||||||    
T  22129553 atttctcttccgctgaagaggaaagtggtgcagaattcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 22129639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 22030947 - 22030862
Alignment:
Q  141 tttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||  || ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  22030947 tttctcttccgctgaggaggaaagtggtgcatagtttttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 22030862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 21164474 - 21164560
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| || |||||||||||||||||||||||||| || ||||||||||||||||||||| | |||||||||| ||| |||||||    
T  21164474 atttctcctcagtcgaagaggaaagtggtgcagagttcttgtctactaagcagctgaagcaattggaacgcgatgatattttgatgt 21164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 32602990 - 32602904
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||| ||||||||||||| ||||||||||| |||||||||||| | |||||||||||||| |||||||    
T  32602990 atttctcttccgctgaagaggaaggtggtgcagagttcttatctactaaacagctgaagcaaatggaacgcgatggtattttgatgt 32602904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 22421811 - 22421691
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||| ||||| | ||||| || ||||| ||||||||| |||||||||||| |||||| || || ||||||||||| |||    
T  22421811 acaattaatatgaacatggttgtacactaactagttcatgccaagaattacatccataccactcaaaggtaaacaaaccaagtcaatttcaaaatcacga 22421712  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | |||||||| |||||||||    
T  22421711 tcaaacatagataaaggacat 22421691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 21391814 - 21391883
Alignment:
Q  157 gaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  ||||||| |||||||| |||||||    
T  21391814 gaggaaagtggtgcagagtttttgtctactaagcagctgaagcagttagaacgtgatggtatcttgatgt 21391883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 21781140 - 21781209
Alignment:
Q  157 gaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  ||||||| |||||||| |||||||    
T  21781140 gaggaaagtggtgcagagtttttgtctactaagcagctgaagcagttagaacgtgatggtatcttgatgt 21781209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 21786308 - 21786377
Alignment:
Q  157 gaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  ||||||| |||||||| |||||||    
T  21786308 gaggaaagtggtgcagagtttttgtctactaagcagctgaagcagttagaacgtgatggtattttgatgt 21786377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 21920054 - 21920126
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||| || ||||| |||||||    
T  21920054 gaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagttagaacgtgacggtattttgatgt 21920126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 21253790 - 21253704
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||||  | ||||| ||||| || |||||||    
T  21253790 atttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagttggaacgtgatggcattttgatgt 21253704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 22246383 - 22246455
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||| | || || ||||||||||||||||||||| ||||||| ||||| || |||||||    
T  22246383 gaagaggaaagtggtgcataattcttgtctactaagcagctgaagcaattagaacgtgatggaattttgatgt 22246455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 22421828 - 22421914
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  ||||||| |||||| |||||||| || ||||||||||||||||||||| | ||||| ||||| || |||||||    
T  22421828 atttctcttctgctgaagaggtaagtggcgcagagttcttgtctactaagcagctgaagcaattggaacgtgatggaattttgatgt 22421914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 22989890 - 22989804
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||  ||| |||| || ||||||||||||||||||||| ||||||| ||||| || |||||||    
T  22989890 atttctcttctgctgaagaggaaagtgacgcatagttcttgtctactaagcagctgaagcaattagaacgtgatggaatcttgatgt 22989804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 22245868 - 22245814
Alignment:
Q  87 aggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggacat 141  Q
    ||||| |||||| ||||  ||||||||||| ||||| ||||||||||||||||||    
T  22245868 aggtaaacaaaccaaattaatttcaaaatctcgaccaaacatagacaaaggacat 22245814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 23887859 - 23887787
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||| |||||||| |||||||| ||| |||||||||||||||| ||  |||| || ||||| || |||||||    
T  23887859 gaagaagaaagtggagcagagttcttaactactaagcagctgaatcagttagatcgtgatggaatcttgatgt 23887787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 6e-52; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 8200833 - 8200956
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  8200833 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 8200932  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  8200933 ccaaacatagacaaaggacatttc 8200956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 10873475 - 10873598
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  10873475 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 10873574  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  10873575 ccaaacatagacaaaggacatttc 10873598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 14335181 - 14335304
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  14335181 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 14335280  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  14335281 ccaaacatagacaaaggacatttc 14335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 44788836 - 44788713
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  44788836 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 44788737  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  44788736 ccaaacatagacaaaggacatttc 44788713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 8710390 - 8710513
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  8710390 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 8710489  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  8710490 ccaaacatagacaaaggacatttc 8710513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 11234698 - 11234575
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  11234698 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 11234599  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  11234598 ccaaacatagacaaaggacatttc 11234575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 13688826 - 13688949
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  13688826 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 13688925  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  13688926 ccaaacatagacaaaggacatttc 13688949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 18587656 - 18587533
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||    
T  18587656 acaattaataagaacgtgattgtactctaaccagttcatacccagaatcacatccataccactcaaaggtagacaaactaaatccatttcgaaatcacga 18587557  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  18587556 ccaaacatagacaaaggacatttc 18587533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 15158542 - 15158419
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||    
T  15158542 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccattttgaaatcacga 15158443  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  15158442 ccaaacatagacaaaggacatttc 15158419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 18180528 - 18180651
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||    
T  18180528 acaattgatgagaacgtggttgtactctaaccagttcatacccagaatcacatccataccactcaagggtagacaaactaaatccatttcaaaatcacga 18180627  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  18180628 ccaaacatagacaaaggacatttc 18180651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 17703940 - 17703820
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| |||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  17703940 acaattgatatgaacatggttgtattctaaccaattcatacccagaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 17703841  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  17703840 ccaaacatagacaaaggacat 17703820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 11550587 - 11550468
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  11550587 acaattaatatgaacatggttgtactccaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 11550488  T
Q  121 ccgaacatagacaaaggaca 140  Q
    || |||||||||||||||||    
T  11550487 ccaaacatagacaaaggaca 11550468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 12690287 - 12690406
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| || |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  12690287 acaattaatatgaacatgcttgtactccaaccaattcatacccagaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 12690386  T
Q  121 ccgaacatagacaaaggaca 140  Q
    || |||||||||||||||||    
T  12690387 ccaaacatagacaaaggaca 12690406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 14957339 - 14957458
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||| ||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  14957339 acaattaatatgaacatggttgtactccaaccaattcatacccaaaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 14957438  T
Q  121 ccgaacatagacaaaggaca 140  Q
    || |||||||||||||||||    
T  14957439 ccaaacatagacaaaggaca 14957458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 10873459 - 10873372
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  10873459 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 10873372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 8710375 - 8710287
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  8710375 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 8710287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 14335166 - 14335078
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  14335166 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 14335078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 18587671 - 18587759
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  18587671 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 18587759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 44788851 - 44788939
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  44788851 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 44788939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 8200817 - 8200730
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  8200817 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 8200730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 11234714 - 11234801
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  11234714 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 11234801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 13688810 - 13688723
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  13688810 catttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 13688723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 15158558 - 15158645
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  15158558 catttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 15158645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 14149938 - 14150024
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||    
T  14149938 atttctcttccgctgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggagcgcgatggtattttgatgt 14150024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 9591136 - 9591050
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||| |||||||    
T  9591136 atttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 9591050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 14957322 - 14957236
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |||||||| |||||||    
T  14957322 atttctcttccgccgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 14957236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 18180513 - 18180427
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||| ||||| |||||||    
T  18180513 acatttctcttccgtcgaagaggaaagtggtgcagag--tttgtctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 18180427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 9591169 - 9591269
Alignment:
Q  37 tggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaag 136  Q
    ||||||||||||||||| |||||||| ||||||||||||||| | |||||||||    |||||||||||||||||||||| ||||| |||||||| ||||    
T  9591169 tggttgtactctaaccaattcatacctagaatcacatccataccgctcaaaggt----aaactaaatccatttcaaaatcacgaccaaacatagataaag 9591264  T
Q  137 gacat 141  Q
    |||||    
T  9591265 gacat 9591269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 11550608 - 11550690
Alignment:
Q  144 ctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |||||||| |||||||    
T  11550608 ctcttccgccgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 11550690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 16726885 - 16726971
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||| |||||||    
T  16726885 atttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagaagctgaagcaaatggaacgcgatggtattttgatgt 16726971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 17703957 - 17704043
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||| |||||||    
T  17703957 atttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagaagctgaagcaaatggaacgcgatggtattttgatgt 17704043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 12690270 - 12690184
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||| | ||||| |||||||| |||||||    
T  12690270 atttctcttccgccgaagaagaatgtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 12690184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 15146408 - 15146285
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||| |  || ||||||||| |||||||||||| |||||| | ||| || ||||||||  ||    
T  15146408 acaattaatgtgaacatggttgtactctaaccagttcataccaactattacatccataccactcaaaggtaaacaaaccatatcaatctcaaaatcaaga 15146309  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
     | |||||||| ||||||||||||    
T  15146308 tcaaacatagataaaggacatttc 15146285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 15146416 - 15146464
Alignment:
Q  170 cagagtttttatctactaagcagctgaagcaactagaacgcgatggtat 218  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  15146416 cagagtttttgtctactaagcagctgaagcaactggaacgcgatggtat 15146464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 15627309 - 15627416
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||| ||||| ||||| |||||||| || || ||||||||  |||||||| | | |||||||||||| |||||||| || |||    
T  15627309 acaattaatatgaacatggttatactccaaccagttcataccaaggattacatccattccactcaaatgcaaacaaactaaatcaatttcaaagtctcga 15627408  T
Q  121 ccgaacat 128  Q
    || |||||    
T  15627409 ccaaacat 15627416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 14149905 - 14149864
Alignment:
Q  37 tggttgtactctaaccatttcatacccagaatcacatccata 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  14149905 tggttgtactctaaccaattcatacccagaatcacatccata 14149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 14042463 - 14042397
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactaga 206  Q
    |||||||||| |  ||||| |||||||| |||||||| || ||||||||||||||||||||| ||||    
T  14042463 atttctcttctgctgaagaagaaagtggcgcagagttcttgtctactaagcagctgaagcaattaga 14042397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 14042482 - 14042600
Alignment:
Q  23 aattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgacc 122  Q
    |||||||  |||| |||||||| |||||||| ||||| |   | || ||||||||| |||| ||||||| |||||| || || |||||||||||  || |    
T  14042482 aattaatgtgaacatggttgtattctaaccagttcatgctagggattacatccataccactaaaaggtaaacaaaccaagtcaatttcaaaatcatgatc 14042581  T
Q  123 gaacatagacaaaggacat 141  Q
     ||||||||||||||||||    
T  14042582 aaacatagacaaaggacat 14042600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 14352493 - 14352427
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactaga 206  Q
    |||||||||| |  ||||| |||||||| |||||||| || ||||||||||||||||||||| ||||    
T  14352493 atttctcttctgctgaagaagaaagtggcgcagagttcttgtctactaagcagctgaagcaattaga 14352427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 14352512 - 14352630
Alignment:
Q  23 aattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgacc 122  Q
    |||||||  |||| |||||||| |||||||| ||||| |   | || ||||||||| |||| ||||||| |||||| || || |||||||||||  || |    
T  14352512 aattaatgtgaacatggttgtattctaaccagttcatgctagggattacatccataccactaaaaggtaaacaaaccaagtcaatttcaaaatcatgatc 14352611  T
Q  123 gaacatagacaaaggacat 141  Q
     ||||||||||||||||||    
T  14352612 aaacatagacaaaggacat 14352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 6e-52; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 25115212 - 25115335
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||    
T  25115212 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccactcaagggtagacaaactaaatccatttcaaaatcacga 25115311  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  25115312 ccaaacatagacaaaggacatttc 25115335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 29590060 - 29589937
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  29590060 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 29589961  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  29589960 ccaaacatagacaaaggacatttc 29589937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 2872423 - 2872300
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  2872423 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 2872324  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  2872323 ccaaacatagacaaaggacatttc 2872300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 22827976 - 22827853
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  22827976 acaattaataagaacgtggttgtactctaagcaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 22827877  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  22827876 ccaaacatagacaaaggacatttc 22827853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 27190096 - 27190219
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  27190096 acaattaataagaacgtgattgtactctaaccagttcatacccagaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 27190195  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || || ||||||||||||||||||    
T  27190196 ccaaatatagacaaaggacatttc 27190219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 27259144 - 27259021
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  27259144 acaattaataagaacgtgattgtactctaaccagttcatacccagaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 27259045  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || || ||||||||||||||||||    
T  27259044 ccaaatatagacaaaggacatttc 27259021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 28312290 - 28312413
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  28312290 acaattaataagaacgtgattgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 28312389  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  28312390 ccaaacatagacaaaggacatttc 28312413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 28260818 - 28260695
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| ||||||| |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  28260818 acaattaataagaacgtgattgtactttaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 28260719  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  28260718 ccaaacatagacaaaggacatttc 28260695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 28285098 - 28285221
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| ||||||| |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  28285098 acaattaataagaacgtgattgtactttaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 28285197  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  28285198 ccaaacatagacaaaggacatttc 28285221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 28339567 - 28339444
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| ||||||| |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  28339567 acaattaataagaacgtgattgtactttaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 28339468  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  28339467 ccaaacatagacaaaggacatttc 28339444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 16574550 - 16574673
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||| |||    
T  16574550 acaattaataaggacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtaggcaaactaaatccatttcgaaatcacga 16574649  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  16574650 ccaaacatagacaaaggacatttc 16574673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 16620830 - 16620707
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||| |||    
T  16620830 acaattaataaggacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtaggcaaactaaatccatttcgaaatcacga 16620731  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  16620730 ccaaacatagacaaaggacatttc 16620707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 24293403 - 24293280
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||    
T  24293403 acaactaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccattttgaaatcacga 24293304  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  24293303 ccaaacatagacaaaggacatttc 24293280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 27559590 - 27559470
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| |||    
T  27559590 acaattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaagtagacaaactaaatccatttcaaaatcacga 27559491  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  27559490 ccaaacatagacaaaggacat 27559470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 28312275 - 28312187
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  28312275 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 28312187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 28260833 - 28260921
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  28260833 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatgatatcttgatgt 28260921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 28285083 - 28284995
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  28285083 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatgatatcttgatgt 28284995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 28339582 - 28339670
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  28339582 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatgatatcttgatgt 28339670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 19867347 - 19867470
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||| || ||||| |||    
T  19867347 acaattaatgtgaacatggttgtattccaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatctcgaaatcacga 19867446  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  19867447 ccaaacatagacaaaggacatttc 19867470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 29590076 - 29590163
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  29590076 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 29590163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 2872439 - 2872527
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttt-tatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  2872439 catttctcttccgtcgaagaggaaagtggtgcagagttttttatctactaagcagctgaagcaactagaacgcgacggtatcttgatgt 2872527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 27190081 - 27189993
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  27190081 acatttctcttctgtcgaagaggaaagtggtgcagagtttttgtctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 27189993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 27259159 - 27259247
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  27259159 acatttctcttctgtcgaagaggaaagtggtgcagagtttttgtctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 27259247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 5836849 - 5836726
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| || |||||||||||||| ||| |||| ||||| ||||||||| | |||||||| |||||||||||||||||||||||||| |||    
T  5836849 acaattaatatgaacatgattgtactctaaccaattcctaccaagaataacatccataccgctcaaagggagacaaactaaatccatttcaaaatcacga 5836750  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||| ||||||||||||    
T  5836749 ccaaacatagaaaaaggacatttc 5836726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 16574534 - 16574447
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  16574534 catttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 16574447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 16620846 - 16620933
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  16620846 catttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 16620933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 22827992 - 22828079
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||| ||| |||||||    
T  22827992 catttctcttccgtcgaagaggaaagtggtgaagagtttttatctactaagcaggtgaagcaactggaacgcgatgatatcttgatgt 22828079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 25115196 - 25115109
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  25115196 catttctcttccgtcgaggaggaaagtggtgcaaagtttttatccactaagcagctgaagcaactggaacgcgatggtatcttgatgt 25115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 16961120 - 16961206
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  16961120 atttctcctcagtcgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaactggaacgtgatggtatattgatgt 16961206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 27559607 - 27559693
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||| |||||||    
T  27559607 atttctcttccgtcgaagaggaaagtggtgcaaagttcttatctactaagcaggtgaagcaactggaacgcgatggtattttgatgt 27559693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 16925261 - 16925141
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||| || || || |||||| |||||||||| | |||||||||||||||||||||||| |||    
T  16925261 acaattgatatgaacatggttgtactctaaccaattcataccaaggatgacgtccataccactcaaaggcaaacaaactaaatccatttcaaaatcacga 16925162  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || |||||||| |||||||||    
T  16925161 ccaaacatagaaaaaggacat 16925141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 24293419 - 24293506
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||| |||||||    
T  24293419 catttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgatgcaactggaacgtgacggtatcttgatgt 24293506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 5836866 - 5836952
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  5836866 atttctcttcagtcgaagaggaaagtggtgcagaattcttatctactaaacagctgaagcaactggaacgcgatggtattttgatgt 5836952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 16925278 - 16925364
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |  | ||||||||||| |||||||    
T  16925278 atttctcttccatcgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatgtagcgcgatggtattttgatgt 16925364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 19867330 - 19867244
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| |||||||||||||||||||||| |||||| || ||||| ||||||||||| |||||||||||||||||||| |||||||    
T  19867330 atttctcctccgtcgaagaggaaagtggtgtagagttcttgtctaccaagcagctgaaacaactagaacgcgatggtattttgatgt 19867244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 22436512 - 22436426
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||| |||||||| |||||||    
T  22436512 atttctctttcgtcgaagaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactggaacgtgatggtattttgatgt 22436426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 18405554 - 18405445
Alignment:
Q  32 gaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacataga 131  Q
    |||| ||||||||||||||||| |||||||| ||||| ||||||||| |||||||||| |||||||| ||||  ||||||||||| | | | ||||||||    
T  18405554 gaacatggttgtactctaaccagttcataccaagaattacatccataccactcaaaggcagacaaaccaaattaatttcaaaatcacaatcaaacataga 18405455  T
Q  132 caaaggacat 141  Q
    ||| ||||||    
T  18405454 caagggacat 18405445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 23081083 - 23081203
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| || |||||||||||||| |||||||| || || ||||||||| || ||||||||| |||||| || || |||||| |||| |||    
T  23081083 acaattaatatgaacatgattgtactctaaccagttcataccaaggattacatccataccaatcaaaggtaaacaaaccaagtcaatttcataatcacga 23081182  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  23081183 tcaaacatagacaaaggacat 23081203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 22436529 - 22436652
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| ||||| ||  ||||| |||||||||| |  ||||| | ||| || |||||||| |||    
T  22436529 acaattaatatgaacatggttgtactctaaccaattcataccaagaatgacgcccataccactcaaaggcaagcaaaccatatcaatctcaaaatcacga 22436628  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || ||||||||||||| |||||||    
T  22436629 ccaaacatagacaaagaacatttc 22436652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 20135634 - 20135747
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||| | | |||||| || || ||||||||  |||||||||||| |||||| ||||| ||||||||||| ||     
T  20135634 acaattaatatgaacatggttgtactctaactagtccataccaaggattacatccattccactcaaaggtaaacaaaccaaatcaatttcaaaatctcgg 20135733  T
Q  121 ccgaacatagacaa 134  Q
    || |||||||||||    
T  20135734 ccaaacatagacaa 20135747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 22197235 - 22197122
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||| | | |||||| || || ||||||||  |||||||||||| |||||| ||||| ||||||||||| ||     
T  22197235 acaattaatatgaacatggttgtactctaactagtccataccaaggattacatccattccactcaaaggtaaacaaaccaaatcaatttcaaaatctcgg 22197136  T
Q  121 ccgaacatagacaa 134  Q
    || |||||||||||    
T  22197135 ccaaacatagacaa 22197122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 18182986 - 18182868
Alignment:
Q  23 aattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgacc 122  Q
    |||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  ||| |||||||| |||||    ||| ||||||||||| |||||    
T  18182986 aattaatatgaacatggttgtactctaaccaattcataccaaggattacatccattccacacaaaggtaaacaaaacgtatcaatttcaaaatctcgacc 18182887  T
Q  123 gaacatagacaaaggacat 141  Q
     | |||||||||| |||||    
T  18182886 aagcatagacaaatgacat 18182868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 18405582 - 18405660
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtat 218  Q
    |||||||||| |  |||||||||||||| ||| ||||||| ||||| ||||||||||||||  ||||||| ||||||||    
T  18405582 atttctcttctgctgaagaggaaagtggcgcaaagtttttgtctaccaagcagctgaagcagttagaacgtgatggtat 18405660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 20135603 - 20135531
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||| |||||||| |||||||| || ||||||||||||||||||||| ||||||  ||||| || |||||||    
T  20135603 gaagaagaaagtggagcagagttcttgtctactaagcagctgaagcaattagaacatgatggaattttgatgt 20135531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 22197266 - 22197338
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||| |||||||| |||||||| || ||||||||||||||||||||| ||||||  ||||| || |||||||    
T  22197266 gaagaagaaagtggagcagagttcttgtctactaagcagctgaagcaattagaacatgatggaattttgatgt 22197338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 23085408 - 23085326
Alignment:
Q  59 tacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggacat 141  Q
    |||| ||||| ||||||||  |||||||||| | |||||| ||||| ||||||||||| | ||| |||||||| |||||||||    
T  23085408 taccaagaattacatccattccactcaaaggcaaacaaaccaaatcaatttcaaaatctctaccaaacatagataaaggacat 23085326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 18183019 - 18183091
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||| |||||||| |||||||| || ||||||||| ||||||||||| ||| ||| ||||| || |||||||    
T  18183019 gaagaagaaagtggagcagagttcttgtctactaagtagctgaagcaattaggacgtgatggaattttgatgt 18183091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 23081052 - 23080980
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| ||| | ||||  ||||| |||||| |||||||| ||||||| ||||| || |||||||    
T  23081052 gaagaggaaagtggcgcaaaattttggtctaccaagcagttgaagcaattagaacgtgatggaattttgatgt 23080980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 12889124 - 12889247
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  12889124 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 12889223  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  12889224 ccaaacatagacaaaggacatttc 12889247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 13255105 - 13255228
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  13255105 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 13255204  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  13255205 ccaaacatagacaaaggacatttc 13255228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 16638188 - 16638311
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  16638188 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 16638287  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  16638288 ccaaacatagacaaaggacatttc 16638311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 20059769 - 20059646
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  20059769 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 20059670  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  20059669 ccaaacatagacaaaggacatttc 20059646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 43165090 - 43165213
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  43165090 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 43165189  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  43165190 ccaaacatagacaaaggacatttc 43165213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 48427864 - 48427985
Alignment:
Q  23 aattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgacc 122  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  48427864 aattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacgacc 48427963  T
Q  123 gaacatagacaaaggacatttc 144  Q
     |||||||||||||||||||||    
T  48427964 aaacatagacaaaggacatttc 48427985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 3688358 - 3688481
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  3688358 acaattaataagaacgtggttgtactgtaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 3688457  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  3688458 ccaaacatagacaaaggacatttc 3688481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 5422645 - 5422522
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  5422645 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 5422546  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||| ||||||||    
T  5422545 ccaaacatagacaaaagacatttc 5422522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 10008015 - 10008138
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||| |||||||||    
T  10008015 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcgcga 10008114  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  10008115 ccaaacatagacaaaggacatttc 10008138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 15587107 - 15586984
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||    
T  15587107 acaattaataagaacgtgattgtactctaaccagttcatacccagaatcacatccataccattcaaaggtagacaaactaaatccatttcaaaatcacga 15587008  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  15587007 ccaaacatagacaaaggacatttc 15586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 15713771 - 15713648
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  15713771 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 15713672  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  15713671 ccaaacatagacaaaggacatttc 15713648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 16754416 - 16754293
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  16754416 acaattaataagaacgtgattgtactctaaccagttcatacccagaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 16754317  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||| ||||||||||    
T  16754316 ccaaacatagacagaggacatttc 16754293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 26791128 - 26791005
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  26791128 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 26791029  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  26791028 ccaaacatagacaaaggacatttc 26791005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 6603151 - 6603273
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  6603151 acaattaataagaacgtgattgtactc-aaccagttcatacccagaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 6603249  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  6603250 ccaaacatagacaaaggacatttc 6603273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 15345960 - 15345837
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||| |||    
T  15345960 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccttaccgctcaaaggtagacaaactaaatccatttcgaaatcacga 15345861  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  15345860 ccaaacatagacaaaggacatttc 15345837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 15400232 - 15400109
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | |||||||| |||||||||||||||||||||||||| |||    
T  15400232 acaattaataagaacgtggttgtactctaaccagttcatacccagaattacatccataccgctcaaaggcagacaaactaaatccatttcaaaatcacga 15400133  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  15400132 ccaaacatagacaaaggacatttc 15400109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 53382733 - 53382610
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||| ||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  53382733 acaattaataagaacgtgattgtactccaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 53382634  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  53382633 ccaaacatagacaaaggacatttc 53382610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 10908625 - 10908748
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||| ||||  |||    
T  10908625 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatgacga 10908724  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  10908725 ccaaacatagacaaaggacatttc 10908748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 15358498 - 15358621
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||| ||||||||| | |||||||| |||||||||||||||||||||||||| |||    
T  15358498 acaattaataagaacgtggttgcactctaactagttcatacccagaattacatccataccgctcaaaggcagacaaactaaatccatttcaaaatcacga 15358597  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  15358598 ccaaacatagacaaaggacatttc 15358621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 24185605 - 24185724
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  24185605 acaattaatatgaacatggttgtactccaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 24185704  T
Q  121 ccgaacatagacaaaggaca 140  Q
    || |||||||||||||||||    
T  24185705 ccaaacatagacaaaggaca 24185724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 15065486 - 15065609
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||| |||||||| |||    
T  15065486 acaattgatatgaacatggttgtactctaaccaattcataccaagaatcacatccataccgctcaaaggtagacaaactaaatccatctcaaaatcacga 15065585  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  15065586 ccaaacatagacaaaggacatttc 15065609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 26191031 - 26190937
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaat 115  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26191031 acaattaataagaacgtggttgtactctaaccagttcatacctagaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaat 26190937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 3688343 - 3688255
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  3688343 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 3688255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 16804660 - 16804550
Alignment:
Q  23 aattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgacc 122  Q
    |||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  16804660 aattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacgacc 16804561  T
Q  123 gaacatagaca 133  Q
     ||||||||||    
T  16804560 aaacatagaca 16804550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 5422660 - 5422748
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  5422660 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 5422748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 6603136 - 6603048
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  6603136 acatttctcttccgtcgaagaggaaagtggtgcagagtttttgtctactaagcagctgaagcaactggaacgcgatggtattttgatgt 6603048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 12889109 - 12889021
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  12889109 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 12889021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 13255090 - 13255002
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  13255090 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 13255002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 20059784 - 20059872
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  20059784 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 20059872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 48427847 - 48427759
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  48427847 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 48427759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 10908609 - 10908522
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  10908609 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 10908522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 15587123 - 15587210
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  15587123 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 15587210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 16638172 - 16638085
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  16638172 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 16638085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 26791144 - 26791231
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  26791144 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 26791231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 43165074 - 43164987
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  43165074 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 43164987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 14579123 - 14579003
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||| |||||||||| | |||||| ||||| ||||||||||| |||    
T  14579123 acaattaatatgaacatggttgtactctaaccagttcatacctagaatcacatccataccactcaaaggcaaacaaaccaaatcaatttcaaaatcacga 14579024  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  14579023 tcaaacatagacaaaggacat 14579003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 15345975 - 15346063
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  15345975 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 15346063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 16694579 - 16694699
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||| ||| | ||||| | | ||||||||||||||||||||||||||||||||||| |||    
T  16694579 acaattgatatgaacatggttgtactctaaccaattcatacccataattaaatccaaaccgctcaaaggtagacaaactaaatccatttcaaaatcacga 16694678  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  16694679 ccaaacatagacaaaggacat 16694699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 16754431 - 16754519
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  16754431 acatttctcttccgtcgaggaggaaagtggtgcagagtttttgtctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 16754519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 10007999 - 10007912
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||    
T  10007999 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcaactgaagcaactggaacgcgacggtatcttgatgt 10007912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 15713787 - 15713874
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| |||||||    
T  15713787 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacgatatcttgatgt 15713874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 16804679 - 16804765
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  16804679 atttctcttccgttgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 16804765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 26191046 - 26191120
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcga 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26191046 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcga 26191120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 14874281 - 14874168
Alignment:
Q  23 aattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgacc 122  Q
    |||||||| |||| ||||| ||||| ||||| ||||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||||| |||||    
T  14874281 aattaatatgaacatggttctactcgaaccagttcatacccagaatcacatacataccgctcaaaggtagacaaactaaatccatctcaaaatcacgacc 14874182  T
Q  123 gaacatagacaaag 136  Q
     |||||||||||||    
T  14874181 aaacatagacaaag 14874168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 53382748 - 53382836
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||| |||||||    
T  53382748 acatttctcttccgtcgaagaggaaagtggtgcagagtttttgtctaccaaacagctgaagcaactggaacgcgatggtatcttgatgt 53382836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 15358482 - 15358395
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  15358482 catttttcttccgtcgaagaggagagtggtgcagagtttttatctactaagcagctgaagcaactggaacacgatggtatcttgatgt 15358395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 15400248 - 15400335
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  15400248 catttttcttccgtcgaagagaagagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 15400335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 12843818 - 12843698
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||| || ||||||||| |||||||||||| |||||| || || ||||||||||| |||    
T  12843818 acaattaatatgaacatggttgtactctaaccagttcatacccaggattacatccataccactcaaaggtaaacaaaccaagtcaatttcaaaatcacga 12843719  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | |||||| |||||||||||    
T  12843718 tcaaacataaacaaaggacat 12843698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 15262045 - 15262165
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||| ||| || || ||||||||  |||||||||||| |||||| ||||| ||||||||||| |||    
T  15262045 acaattaatatgaacatggttgtactctaaccagttcacaccaaggattacatccattccactcaaaggtaaacaaaccaaatcaatttcaaaatctcga 15262144  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  15262145 ccaaacatagacaaaggacat 15262165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 16694562 - 16694476
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||| |||||||    
T  16694562 atttctcttccgctgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 16694476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 24185588 - 24185502
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |||||||| |||||||    
T  24185588 atttctcttccgccgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 24185502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 17492266 - 17492386
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| ||||| || |||||||| |||    
T  17492266 acaattaatgtgaacatggttgtactctaaccagttcataccaagaattacatccataccactcaaaggtagacaaaccaaatcaatctcaaaatcacga 17492365  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | |||||| |||| ||||||    
T  17492366 tcaaacataaacaagggacat 17492386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 15065469 - 15065400
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacg 209  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  15065469 atttctcttccgtcgaagaggaaagtggtgcagagttcttatctaccaagcagctgaagcaactggaacg 15065400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 14874300 - 14874386
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| || ||||||||||||| |||||||||||| || | ||||||||||||||||||||| ||||| ||||||||||||||||    
T  14874300 atttctcctcagtcgaagaggaaattggtgcagagttcttgtttactaagcagctgaagcaactggaacgtgatggtatattgatgt 14874386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 18437538 - 18437463
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  18437538 atttctcttctgctgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcagttagaacgtgatgg 18437463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 17492249 - 17492163
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| || |||||||| ||||||||||||||||||||  ||||||| |||||||| |||||||    
T  17492249 atttctcttctgctgaagaggaaagtggcgcggagtttttgtctactaagcagctgaagcagttagaacgtgatggtattttgatgt 17492163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 15262014 - 15261942
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||| || |||||||    
T  15262014 gaagaagaaagtggcgcagagtttttgtctactaagcagctgaagcaattagaacgtgatggaattttgatgt 15261942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 14579140 - 14579215
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    |||||||||| |  |||||||||||||| ||||| ||||||||||||||||||||||||||  ||||||| |||||    
T  14579140 atttctcttctgctgaagaggaaagtggcgcagaatttttatctactaagcagctgaagcagttagaacgagatgg 14579215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 47126391 - 47126488
Alignment:
Q  43 tactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggaca 140  Q
    ||||||||||| |||||||| | ||||||||||||| |  |||| || |||||||||||||| ||| ||||||| | ||| |||||||| | ||||||    
T  47126391 tactctaaccaattcataccaaaaatcacatccatacccgtcaacggcagacaaactaaatcaattacaaaatctctaccaaacatagatataggaca 47126488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 10408415 - 10408512
Alignment:
Q  43 tactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggaca 140  Q
    ||||||||||| |||||||| | ||||||||||||| |  |||| || |||||||||||||| ||  ||||||| | ||| |||||||| | ||||||    
T  10408415 tactctaaccaattcataccaaaaatcacatccatacccgtcaacggcagacaaactaaatcaatcacaaaatctctaccaaacatagatataggaca 10408512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 12843849 - 12843921
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| ||| | || || ||||||||||||| ||||||  ||||||| ||||| || |||||||    
T  12843849 gaagaggaaagtggcgcataattcttgtctactaagcagcagaagcagttagaacgtgatggaattttgatgt 12843921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 14291235 - 14291179
Alignment:
Q  22 caattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccata 78  Q
    ||||||||| |||| ||||| ||||||||||| ||||| || | |||||||||||||    
T  14291235 caattaatatgaacatggttatactctaaccagttcatcccaaaaatcacatccata 14291179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 9338009 - 9338132
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  9338009 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 9338108  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  9338109 ccaaacatagacaaaggacatttc 9338132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 9486643 - 9486766
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  9486643 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 9486742  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  9486743 ccaaacatagacaaaggacatttc 9486766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 16983667 - 16983790
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  16983667 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 16983766  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  16983767 ccaaacatagacaaaggacatttc 16983790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 17001427 - 17001550
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  17001427 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 17001526  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  17001527 ccaaacatagacaaaggacatttc 17001550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 24712461 - 24712584
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  24712461 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 24712560  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  24712561 ccaaacatagacaaaggacatttc 24712584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 27220443 - 27220566
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  27220443 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 27220542  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  27220543 ccaaacatagacaaaggacatttc 27220566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 44383586 - 44383463
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  44383586 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 44383487  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  44383486 ccaaacatagacaaaggacatttc 44383463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 11351727 - 11351604
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  11351727 acaattaatatgaacatggttgtactctaaccaattcatacccagaatcacatccatatcgctcaaaggtagacaaactaaatccatttcaaaatcacga 11351628  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  11351627 ccaaacatagacaaaggacatttc 11351604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 21143057 - 21142934
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  21143057 acaattaataagaacgtggttgtactctaaccagttcatacctagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 21142958  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  21142957 ccaaacatagacaaaggacatttc 21142934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 22323358 - 22323235
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  22323358 acaattaataagaacgtggttgtactctaaccagttcatacctaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 22323259  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  22323258 ccaaacatagacaaaggacatttc 22323235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 24874766 - 24874644
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  24874766 acaattaataagaatgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 24874667  T
Q  121 ccgaacatagacaaaggacattt 143  Q
    || ||||||||||||||||||||    
T  24874666 ccaaacatagacaaaggacattt 24874644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 10871277 - 10871400
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  10871277 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 10871376  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||| ||||||||    
T  10871377 ccaaacatagacaaacgacatttc 10871400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 24264797 - 24264920
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  24264797 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 24264896  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||| ||||||||||||||    
T  24264897 ccaaacataaacaaaggacatttc 24264920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 27373696 - 27373819
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||| |||    
T  27373696 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtaggcaaactaaatccatttcgaaatcacga 27373795  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  27373796 ccaaacatagacaaaggacatttc 27373819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 41606401 - 41606279
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| ||||| |||    
T  41606401 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaagatagacaaactaaatccatttcgaaatcacga 41606302  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || ||||||||| |||||||||||    
T  41606301 ccaaacatagac-aaggacatttc 41606279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 24677914 - 24678034
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| |||    
T  24677914 acaattaatgtgaacatggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatctcaaaatcacga 24678013  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  24678014 ccaaacatagacaaaggacat 24678034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 21143073 - 21143160
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  21143073 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 21143160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 16983652 - 16983564
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  16983652 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 16983564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 17001412 - 17001324
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  17001412 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 17001324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 22323373 - 22323461
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  22323373 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 22323461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 23204741 - 23204861
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| |||    
T  23204741 acaattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccattacaaaatcacga 23204840  T
Q  121 ccgaacatagacaaaggacat 141  Q
    ||   ||||||||||||||||    
T  23204841 ccatccatagacaaaggacat 23204861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 24657674 - 24657554
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||| ||| |||||| | ||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  24657674 acaattgatatgaacatggttgtactctacccaattcatatcaagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 24657575  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  24657574 ccaaacatagacaaaggacat 24657554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 45674012 - 45673908
Alignment:
Q  37 tggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaag 136  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||| ||||| ||||||||||||     
T  45674012 tggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaattcatttcaaaatcacgaccaaacatagacaaaa 45673913  T
Q  137 gacat 141  Q
    |||||    
T  45673912 gacat 45673908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 9337993 - 9337906
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  9337993 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 9337906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 9486627 - 9486540
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  9486627 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 9486540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 10871261 - 10871174
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  10871261 catttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 10871174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 24874782 - 24874869
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  24874782 catttctcttccgtcgaagaggagagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 24874869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 27220425 - 27220340
Alignment:
Q  141 tttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  27220425 tttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 27220340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 23029477 - 23029357
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||| || ||||| |||    
T  23029477 acaattaatgtgaacatggttgtattccaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatctcgaaatcacga 23029378  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  23029377 ccaaacatagacaaaggacat 23029357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 24705498 - 24705382
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||| ||||||| ||  ||| ||||||||||||||||||||||||||||||||||||| |||    
T  24705498 acaattgatatgaacatggttgtactctaaccaattcataccaagaatcatattaataccactcaaaggtagacaaactaaatccatttcaaaatcacga 24705399  T
Q  121 ccgaacatagacaaagg 137  Q
    || ||||||||||||||    
T  24705398 ccaaacatagacaaagg 24705382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 24712446 - 24712358
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  24712446 acatttctcttccgtcgaagaggagagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 24712358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 27373681 - 27373593
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  27373681 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 27373593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 44383601 - 44383689
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  44383601 acatttctcttccgtcgaagaggaaagtggtgtagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 44383689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 41606417 - 41606504
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  41606417 catttctcttccgtcgaagaggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 41606504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 24657691 - 24657777
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  24657691 atttctcttccgtcgaagaggaaagtggagcagagttcttatctactaagcagctgaagcaactggaacgcgatggtattttgatgt 24657777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 24705515 - 24705601
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  24705515 atttctcttccgtcgaagaggaaagtggtgcagagttcttatctaccaagcagctgaagcaactggaacgcgatggtattttgatgt 24705601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 24264781 - 24264694
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  24264781 catttctcttccgtcgaagaggaaagtggtgcggagtttctatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 24264694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 21323271 - 21323159
Alignment:
Q  32 gaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacataga 131  Q
    |||| |||||||| |  ||||| |||||||||||||||||||||| | | |||||||||||||||||||||||||| || ||||| ||||| ||||||||    
T  21323271 gaacatggttgtattgcaaccaattcatacccagaatcacatccacaccgctcaaaggtagacaaactaaatccatctcgaaatcacgaccaaacataga 21323172  T
Q  132 caaaggacatttc 144  Q
    |||||||||||||    
T  21323171 caaaggacatttc 21323159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 23074290 - 23074410
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| ||||| || ||||||||  ||    
T  23074290 acaattaatgtgaacatggttgtactctaaccaattcataccaagaattacatccataccactcaaaggtagacaaaccaaatcaatctcaaaatcaaga 23074389  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  23074390 tcaaacatagacaaaggacat 23074410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 23105744 - 23105624
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| ||||||||||||| |||||||||| |  ||||||||||||||||||||||||| |||||||| |||    
T  23105744 acaattaatgtgaacatggttgtattccaaccagttcatacccagaaacacatccataccgatcaaaggtagacaaactaaatccatctcaaaatcacga 23105645  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  23105644 tcaaacatagacaaaggacat 23105624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 24677897 - 24677811
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||| ||||||||| |||||||    
T  24677897 atttctcctccgtcgaagaggaaagtggtgcaaagttcttatctaccaagcagctgaagcaactggaacacgatggtattttgatgt 24677811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 21323299 - 21323385
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| || ||||||||||||||||| |||||||| || ||||| ||||||||||||||||| |||||||||||||| |||||||    
T  21323299 atttctcctcagtcgaagaggaaagtggcgcagagttcttgtctaccaagcagctgaagcaactggaacgcgatggtattttgatgt 21323385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 11351744 - 11351804
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagca 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  11351744 atttctcttccgtcgaagaggaaagtggtgcagagttcttatctaccaagcagctgaagca 11351804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 22733790 - 22733670
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||||||||||||  ||||||| ||||| ||||||||| ||||||||| ||||||||| ||||| || | |||||| |||    
T  22733790 acaattaatgtgaacatggttgtactctaaccaggtcataccaagaattacatccataccactcaaagctagacaaaccaaatcaatctgaaaatcacga 22733691  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||| ||||||    
T  22733690 tcaaacatagacaagggacat 22733670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 23204724 - 23204638
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  |||||||| |||| ||||||||| ||||||||||||||| |||||||| | |||||||||||||| |||||||    
T  23204724 atttctcttccgctgaagaggagagtgatgcagagttcttatctactaagcagttgaagcaaatggaacgcgatggtatcttgatgt 23204638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 23074273 - 23074187
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||| ||||||||||||| ||||||||||||||  ||||||| |||||||| |||||||    
T  23074273 atttctcttctgctgaagaggaaagtggcgcaaagtttttatctaccaagcagctgaagcagttagaacgtgatggtattttgatgt 23074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 22733808 - 22733893
Alignment:
Q  141 tttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||||   |||||| |||||||| |||||||    
T  22733808 tttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagtaagaacgtgatggtattttgatgt 22733893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 23105761 - 23105819
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaag 198  Q
    |||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||    
T  23105761 atttctcttctgatgaagaggaaagtggcgcagagtttttgtctactaagcagctgaag 23105819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 226
Target Start/End: Original strand, 11351800 - 11351839
Alignment:
Q  187 aagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  11351800 aagcagctgaagcaactggaacgcgatggtattttgatgt 11351839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 16348143 - 16348020
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  16348143 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 16348044  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  16348043 ccaaacatagacaaaggacatttc 16348020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 51331040 - 51330917
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  51331040 acaattaataagaacgtggttgtactctaaccagttcatacccaaaatcacatccataccactcaaaggtagacaaactaaatccatttcaaaatcacga 51330941  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  51330940 ccaaacatagacaaaggacatttc 51330917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 33388577 - 33388454
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  33388577 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 33388478  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  33388477 ccaaacatagacaaaggacatttc 33388454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 19109179 - 19109302
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  ||    
T  19109179 acaattaataagaacgtgattgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcatga 19109278  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  19109279 ccaaacatagacaaaggacatttc 19109302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 41351216 - 41351093
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||    
T  41351216 acaattaataagaacgtgattgtactctaaccagttcatacccagaatcacatccataccactcaaaggtaggcaaactaaatccatttcaaaatcacga 41351117  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    |  |||||||||||||||||||||    
T  41351116 ctaaacatagacaaaggacatttc 41351093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 21833113 - 21833236
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||    
T  21833113 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccattttgaaatcacga 21833212  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||| ||||||||||||    
T  21833213 ccaaacatagataaaggacatttc 21833236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 17042563 - 17042443
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  17042563 acaattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 17042464  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  17042463 ccaaacatagacaaaggacat 17042443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 16348158 - 16348246
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  16348158 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 16348246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 41351231 - 41351319
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  41351231 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 41351319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 21833098 - 21833010
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  21833098 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 21833010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 19109163 - 19109076
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  19109163 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 19109076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 20081896 - 20081801
Alignment:
Q  49 aaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggacatttc 144  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  20081896 aaccagttcatacccagaatcacatccataccactcaaaggtagacaaactaaatccatctcaaaatcacgaccaaacatagacaaaggacatttc 20081801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 21839745 - 21839658
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  21839745 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 21839658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 24785405 - 24785282
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||| ||| ||||||||| | ||||||||||||||||| | ||||||||||||||| |||    
T  24785405 acaattgatatgaacatggttgtactctaaccaattcatacccataattacatccataccgctcaaaggtagacaaaccagatccatttcaaaatcacga 24785306  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  24785305 ccaaacatagacaaaggacatttc 24785282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 51331056 - 51331143
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  51331056 catttcttttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 51331143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 24785422 - 24785508
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  24785422 atttctcttccgtcgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaactggaacgcgatggtattttgatgt 24785508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 33388592 - 33388680
Alignment:
Q  138 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  33388592 acatttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 33388680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 21233279 - 21233184
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatc 116  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  21233279 acaattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatc 21233184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 16378905 - 16379025
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||| || ||||||||  | |||||||||| |||||| ||||| || |||||||| |||    
T  16378905 acaattaatatgaacatggttgtactctaaccaattcatacccaggattacatccattccgctcaaaggtaaacaaaccaaatcaatctcaaaatcacga 16379004  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  16379005 ccaaacatagacaaaggacat 16379025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 22502854 - 22502938
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgat 224  Q
    ||||||| ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||| |||||    
T  22502854 atttctcctccgttgaagaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactagaacgcgatggtattttgat 22502938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 21842066 - 21842146
Alignment:
Q  64 agaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggacatttc 144  Q
    ||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  21842066 agaatcacatccataccgctcaaaggcagacaaactaaatccatttcaaaatcacgaccaaacatagacaaatgacatttc 21842146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 429689 - 429585
Alignment:
Q  37 tggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaag 136  Q
    |||||||| || ||||| |||||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||| | | | ||||||||||||     
T  429689 tggttgtattccaaccaattcataccaagaatcacatccataccactcaaatgtagacaaaccaaatccatctcaaaatcactatcaaacatagacaaat 429590  T
Q  137 gacat 141  Q
    |||||    
T  429589 gacat 429585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 17042580 - 17042666
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||| | |||| |||| |||| |||||||    
T  17042580 atttctcttccgctgaagaggaaagtggtgcagagttcttatctgctaagcagctgaagcaaatggaacacgatagtattttgatgt 17042666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 22502837 - 22502751
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccat 107  Q
    |||||||||  |||| |||||||| || ||||| |||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  22502837 acaattaatgtgaacatggttgtattccaaccagttcatacccagaatcacatccattccgctcaaaggtagacaaactaaatccat 22502751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 21751748 - 21751868
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||| | || || || ||||||||||||||| |||||||||||| |||||| | ||| || |||||||  |||    
T  21751748 acaattaatgtgaacatggttgtactctaacgagttgatgccaagaatcacatccataccactcaaaggtaaacaaaccatatcaatctcaaaattacga 21751847  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  21751848 tcaaacatagacaaaggacat 21751868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 21233296 - 21233382
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  |||||||||||||||||| ||||  ||||||||| ||||||||||||| |  ||||||||||||| |||||||    
T  21233296 atttctcttccgctgaagaggaaagtggtgcaaagttcgtatctactatgcagctgaagcaaatgaaacgcgatggtattttgatgt 21233382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 21839761 - 21839808
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaat 68  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21839761 acaattaataagaacgtggttgtactctaaccagttcatacccagaat 21839808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 22359823 - 22359893
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgat 224  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |  ||||||| |||||||| |||||    
T  22359823 gaagagaaaagtggtgcagagtttttgtctactaagcagctgaagtagttagaacgtgatggtattttgat 22359893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 21751717 - 21751656
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||||  ||||||| |||||    
T  21751717 gaagaggaaagtggcgcagagtttttgtctactaaacagctgaagcagttagaacgtgatgg 21751656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 21861938 - 21862022
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgat 224  Q
    |||||||||| |  ||||| ||| |||| |||||||| |||||||| ||||||||||||||| ||||||| ||||| || |||||    
T  21861938 atttctcttctgctgaagaagaatgtggcgcagagttcttatctacgaagcagctgaagcaattagaacgtgatggaatcttgat 21862022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 38910352 - 38910255
Alignment:
Q  43 tactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggaca 140  Q
    ||||||||||| |||||||| | ||||||||||||| |  |||| || |||||||||||||| ||  ||||||| | ||| |||||||| | ||||||    
T  38910352 tactctaaccaattcataccaaaaatcacatccatacccgtcaacggcagacaaactaaatcaatcacaaaatctctaccaaacatagatataggaca 38910255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 16378865 - 16378813
Alignment:
Q  163 agtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    ||||| ||| ||||||| ||||||||||||||||||||| ||||||| |||||    
T  16378865 agtggagcaaagtttttgtctactaagcagctgaagcaattagaacgtgatgg 16378813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 20140863 - 20140791
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| ||| | ||  | ||||||||||||||||||||  ||||||| |||||||| |||||||    
T  20140863 gaagaggaaagtggcgcataattcatgtctactaagcagctgaagcagttagaacgtgatggtattttgatgt 20140791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 12200382 - 12200470
Alignment:
Q  43 tactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacataga 131  Q
    ||||||||||| |||||||| | ||||||||||||| |  |||| || ||||| |||||||| ||  ||||||| | ||| ||||||||    
T  12200382 tactctaaccaattcataccaaaaatcacatccatacccgtcaacggcagacacactaaatcaatcacaaaatctctaccaaacataga 12200470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 100; Significance: 1e-49; HSPs: 4)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 3249 - 3372
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||    
T  3249 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaatcacga 3348  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  3349 ccaaacatagacaaaggacatttc 3372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 137
Target Start/End: Original strand, 16985 - 17101
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| ||||  |||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  16985 acaattgatatgaacacggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 17084  T
Q  121 ccgaacatagacaaagg 137  Q
    |  |||||||| |||||    
T  17085 ctaaacatagataaagg 17101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 3233 - 3146
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  3233 catttctcttccgtcgaagaggaaagtggtgcgaagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 3146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 16966 - 16882
Alignment:
Q  142 ttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||| |||||||    
T  16966 ttctcttccgtcgaagaggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaatgcgatggtattttgatgt 16882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 100; Significance: 1e-49; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 11294 - 11417
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||    
T  11294 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaaccaaatccatttcaaaatcacga 11393  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  11394 ccaaacatagacaaaggacatttc 11417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 17762 - 17885
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||    
T  17762 acaattaataagaacgtggttgtactctaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaaccaaatccatttcaaaatcacga 17861  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  17862 ccaaacatagacaaaggacatttc 17885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 53552 - 53675
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||    
T  53552 acaattaataagaacgtggttgtactccaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaaccaaatccatttcaaaatcacga 53651  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  53652 ccaaacatagacaaaggacatttc 53675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 53536 - 53449
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  53536 catttctcttccgtcgaagaggaaagtggtgcaaagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 53449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 11278 - 11191
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  11278 catttctcttccgtcgaagaggagagtggtgcagagtttttatctactaagcagctgaagcgactggaacgcgatggtatcttgatgt 11191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 17746 - 17659
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||| |||||||    
T  17746 catttctcttccgtcgaagaggagagtggtgcagagtttttatctactaagcagctgaagcgactggaatgcgatggtatcttgatgt 17659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 92; Significance: 8e-45; HSPs: 4)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 40980 - 41103
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  40980 acaatttataagaatgtggttgtactctaaccagttcatacccaaaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 41079  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  41080 ccaaacatagacaaaggacatttc 41103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 40964 - 40877
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  40964 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaggcagctgaagcaactggaacgcgatggtatcttgatgt 40877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 13603 - 13483
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  13603 acaatttatatgaacatggttgtactctaaccaattcatacccaaaatcacatccataacgctcaaaggtagacaaactaaatccatttcaaaatcacga 13504  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || | ||| || |||||||||    
T  13503 ccaaccattgataaaggacat 13483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 13620 - 13706
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||||||| |||||||    
T  13620 atttctcttccgctgaagaggaaagtggtgcagaattcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 13706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 89; Significance: 5e-43; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 14249 - 14369
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  14249 acaattgatatgaacatggttgtactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 14348  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  14349 ccaaacatagacaaaggacat 14369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 4740 - 4860
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||| || ||||||||  |||||||||||| ||||||||| || |||||||| ||  ||    
T  4740 acaattaatatgaacatggttgtactctaaccagttcatacccaggattacatccattccactcaaaggtaaacaaactaagtcaatttcaaactcttga 4839  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || |||| |||||||||||||    
T  4840 ccaaacaaagacaaaggacat 4860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 4710 - 4637
Alignment:
Q  153 cgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||| || ||||| ||||| || || ||||||||||||||||||||| ||||||||||||| || |||||||    
T  4710 cgaagaagagagtggagcagaattcttgtctactaagcagctgaagcaattagaacgcgatggaattttgatgt 4637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 36323 - 36443
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||||||||||| ||||||||||||||| |||    
T  36323 acaattaatatgaacatggttgtactctaaccaattcataccaagaatcacatccataccgctcaaaggtagacaaactagatccatttcaaaatcacga 36422  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  36423 ccaaacatagacaaaggacat 36443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 28886 - 28800
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||    
T  28886 atttctcttccgtcgaagaggaaagtggtgcagagttcttgtctactaagcagctgaagcaactggaacgcgatggtattttgatgt 28800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 36306 - 36229
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggta 217  Q
    ||||||||||||||||||||||||||||||||||||| || | ||| ||||||||||||||||| |||||||||||||    
T  36306 atttctcttccgtcgaagaggaaagtggtgcagagttcttgtttaccaagcagctgaagcaactggaacgcgatggta 36229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 28903 - 28944
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacc 62  Q
    |||||||||| |||| ||||||||||||||||| ||||||||    
T  28903 acaattaatatgaacatggttgtactctaaccaattcatacc 28944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 17545 - 17425
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  17545 acaattgatatgaacatggttgtactctaaccaattcataccaagaatcacatccatatcgctcaaaggtagacaaactaaatccatttcaaaatcacga 17446  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || |||||||| |||||||||    
T  17445 ccaaacatagataaaggacat 17425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 17562 - 17648
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||| |||||||    
T  17562 atttctcttccgtcgaagaggaaagtggtgcagagttcttatctactaagaagctgaagcaattggaacgcgatggtattttgatgt 17648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 195317 - 195194
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| |  || || |||||||||||||||||||||| | | |||||||||||| ||||||||||||| || ||||| ||     
T  195317 acaattaatgtgaacatggttgtattgcaatcagttcatacccagaatcacatccacaccgctcaaaggtagagaaactaaatccatctcgaaatcacgt 195218  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  195217 ccaaacatagacaaaggacatttc 195194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 195334 - 195412
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtat 218  Q
    ||||||| || |||||||||||||||||||||||||| || ||||| ||||||||||||||| ||||||||||||||||    
T  195334 atttctcctcagtcgaagaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaattagaacgcgatggtat 195412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 1511 - 1388
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| |||||||||| |||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| |||    
T  1511 acaattgatatgaacatggttgtactgtaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatctcaaaatcacga 1412  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  1411 ccaaacatagacaaaggacatttc 1388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 1528 - 1614
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||  ||||||||||||| |||||||    
T  1528 atttctcttccatcgaagaggaaagtggtgtagagtttctatctactaagcagctgaagcaactgcaacgcgatggtattttgatgt 1614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 8083 - 8202
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  8083 acaattaatatgaacatggttgtactccaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 8182  T
Q  121 ccgaacatagacaaaggaca 140  Q
    || ||||||||||| |||||    
T  8183 ccaaacatagacaacggaca 8202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 8066 - 7980
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| | ||||| |||||||| |||||||    
T  8066 atttctcttccgccgaagaggatagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 7980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 84; Significance: 5e-40; HSPs: 10)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 31708 - 31831
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||| | | |||||||||||||||||||||||||| |||||||| |||    
T  31708 acaattaatatgaacatggttgtactctaaccaattcatacctagaatcacatccaaaccgctcaaaggtagacaaactaaatccatatcaaaatcacga 31807  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  31808 ccaaacatagacaaaggacatttc 31831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 37174 - 37297
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||| | | |||||||||||||||||||||||||| |||||||| |||    
T  37174 acaattaatatgaacatggttgtactctaaccaattcatacctagaatcacatccaaaccgctcaaaggtagacaaactaaatccatatcaaaatcacga 37273  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  37274 ccaaacatagacaaaggacatttc 37297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 10717 - 10597
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  10717 acaatttatatgaacatggttgtactctaaccaattcatacccataatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 10618  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || |||||||  |||||||||    
T  10617 ccaaacatagttaaaggacat 10597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 13372 - 13252
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  13372 acaatttatatgaacatggttgtactctaaccaattcatacccataatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 13273  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || |||||||  |||||||||    
T  13272 ccaaacatagttaaaggacat 13252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 54462 - 54582
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| ||||| || ||||||||||||||| |||||||||||| ||||||||||||||| |||||||| |||    
T  54462 acaattaatatgaacatggttgtactctaaccagttcatgccaagaatcacatccataccactcaaaggtaaacaaactaaatccatctcaaaatcacga 54561  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | |||||||| |||||||||    
T  54562 tcaaacatagaaaaaggacat 54582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 31691 - 31606
Alignment:
Q  141 tttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||| || |||||||||||||||||||||||||| || |||||||||||||||| || ||| |||||||||||||| |||||||    
T  31691 tttctcctctgtcgaagaggaaagtggtgcagagttcttgtctactaagcagctgatgcgactggaacgcgatggtattttgatgt 31606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 37157 - 37072
Alignment:
Q  141 tttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||| || |||||||||||||||||||||||||| || |||||||||||||||| || ||| |||||||||||||| |||||||    
T  37157 tttctcctctgtcgaagaggaaagtggtgcagagttcttgtctactaagcagctgatgcgactggaacgcgatggtattttgatgt 37072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 10734 - 10820
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  |||||||||||||||||| | || |||||||||||| || |||||||| | |||||||||||||| |||||||    
T  10734 atttctcttccgctgaagaggaaagtggtgcaaaattcttatctactaagtagatgaagcaaatggaacgcgatggtattttgatgt 10820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 13389 - 13475
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||  |||||||||||||||||| | || |||||||||||| || |||||||| | |||||||||||||| |||||||    
T  13389 atttctcttccgctgaagaggaaagtggtgcaaaattcttatctactaagtagatgaagcaaatggaacgcgatggtattttgatgt 13475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 54445 - 54370
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    |||||||||| |  |||||||||||||| ||||||||||| |||||||||||| |||||||  ||||||| |||||    
T  54445 atttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagttgaagcagttagaacgtgatgg 54370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 145
Target Start/End: Complemental strand, 959 - 835
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| |||||| |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  959 acaattgatatgaacatggttgcactctaaccaattcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacga 860  T
Q  121 ccgaacatagacaaaggacatttct 145  Q
    || |||||| | |||||||||||||    
T  859 ccaaacatatataaaggacatttct 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 10637 - 10514
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||| ||||| |||| || |||||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||| |||||||| |||    
T  10637 acaactaatatgaacatgattgtactctaaccaattcatacccagaattacatccataccgctcaaaggtagacaaactaaatccatctcaaaatcacga 10538  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  10537 ccaaacatagacaaaggacatttc 10514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 10654 - 10740
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| || |||||||||||||||||||||||||| || ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  10654 atttctcctctgtcgaagaggaaagtggtgcagagttcttgtctactaagaagctgaagcaactggaacgcgatggtatattgatgt 10740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 29407 - 29287
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||| ||||||||||||||||| | |||||| |||||||||||||||||||||||||||| |||    
T  29407 acaattgatatgaacatggttgtactctaaccaattcatatccagaatcacatccataccgctcaaatgtagacaaactaaatccatttcaaaatcacga 29308  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || |||||||| |||||||||    
T  29307 ccaaacatagataaaggacat 29287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 29424 - 29510
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||| |||||||    
T  29424 atttctcttccgtcgaagaggaaagtggtgcagagttcttatctactaagcagctgaagaaactggagcgcgatggtattttgatgt 29510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 9749 - 9662
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  9749 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 9662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 9765 - 9812
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaat 68  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9765 acaattaataagaacgtggttgtactctaaccagttcatacccagaat 9812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 50824 - 50701
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| | |||||| |||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||||| |||    
T  50824 acaattaatgtgaacatggttgtattttaaccagttcatacccataatcacatccataccgctcaaaggtagacaaactaaatccatctcaaaatcacga 50725  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  50724 ccaaacatagacaaaggacatttc 50701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 50841 - 50919
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtat 218  Q
    ||||||| || |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  50841 atttctcctcagtcgaagaggaaagtggtgcagagttcttgtctactaagcagctgaagcaactagaacgcgatggtat 50919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 42524 - 42642
Alignment:
Q  22 caattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgac 121  Q
    ||||||||| ||||  |||| ||||||||||| ||||| || | ||| ||||||||| |  |||| |||| ||||||||| || | |||||| || | ||    
T  42524 caattaatatgaactcggttatactctaaccagttcatcccaaaaattacatccatacctgtcaatggtaaacaaactaagtcgacttcaaagtctctac 42623  T
Q  122 cgaacatagacaaaggaca 140  Q
    | ||||||||||| |||||    
T  42624 caaacatagacaacggaca 42642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 3426 - 3546
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||| |||    
T  3426 acaattaatgtgaacatggttgtactctaaccagttcataccaagaattacatccataccactcaaaggtagacaaaccaaatcaatttcaaaatcacga 3525  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  3526 tcaaacatagacaaaggacat 3546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 3409 - 3323
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| |||||||||||||||||||| |||||||||||  |||||||  |||| || |||||||    
T  3409 atttctcttctgcggaagaggaaagtggcgcagagtttttatctactaaacagctgaagcagttagaacgttatggaattttgatgt 3323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 25191 - 25071
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||| | |||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||| |||    
T  25191 acaattaatgtgaacatggttgtactctaactagttcatacccagaatcacatccataccactcaaaggtaaacaaactaaatccatctcaaaatcacga 25092  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | |||||||| |||||||||    
T  25091 tcaaacatagataaaggacat 25071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 25208 - 25268
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagca 200  Q
    |||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  25208 atttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagca 25268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 11835 - 11715
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||| ||| |||| ||||||||||||||||| |||||||||| ||||||||||||| | ||||| |||||||||||||||| |||||||||||| |||    
T  11835 acaattgatatgaacatggttgtactctaaccaattcatacccataatcacatccataccgctcaagggtagacaaactaaattcatttcaaaatcacga 11736  T
Q  121 ccgaacatagacaaaggacat 141  Q
    |  |||||||| |||||||||    
T  11735 ctaaacatagataaaggacat 11715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 11852 - 11938
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||||| |||||||    
T  11852 atttctcttctgtcgaagaggaaagtggtgtagagttcttatctactaagcagctgaagtaactggaacgcgatggtattttgatgt 11938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 8236 - 8323
Alignment:
Q  139 catttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||    
T  8236 catttctctttcgttgaagaggaaagtggtgcagagtttttatctactaagcagctgaagaaactggaacgcgatggtatcttgatgt 8323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 8220 - 8146
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagaca 95  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  8220 acaatgaataagaacgtggttgtactctaaccaattcatacccagaatcacatccataccactcaaaggtagaca 8146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 21429 - 21552
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||||| || ||||| |||    
T  21429 acaattaatgtgaacatggttgtattccaaccagttcatacgcagaatcacatccataccgctcaaaggtagacaaactaaatccatctcgaaatcacga 21528  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || ||||||||||||||| |||||    
T  21529 ccaaacatagacaaaggaaatttc 21552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 36853 - 36976
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||||| || ||||| |||    
T  36853 acaattaatgtgaacatggttgtattccaaccagttcatacgcagaatcacatccataccgctcaaaggtagacaaactaaatccatctcgaaatcacga 36952  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || ||||||||||||||| |||||    
T  36953 ccaaacatagacaaaggaaatttc 36976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 21412 - 21326
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||  ||||||||||||||||||||||    
T  21412 atttctcctccgtcgaagaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaacaggaacgcgatggtatattgatgt 21326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 36836 - 36750
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||  ||||||||||||||||||||||    
T  36836 atttctcctccgtcgaagaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaacaggaacgcgatggtatattgatgt 36750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 68; Significance: 2e-30; HSPs: 6)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 35193 - 35071
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| || ||||||||| ||||||||||| | || |||||||||||||||||||||||||||||||| |||    
T  35193 acaattaatgtgaacatggttgtattccaaccagtttatacccaga-tcacatccataccgcttaaaggtagacaaactaaatccatttcaaaatcacga 35095  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  35094 ccaaacatagacaaaggacatttc 35071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 35210 - 35296
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||| |||||||    
T  35210 atttctcctccgtcgaagaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactggaacgcgatggtattttgatgt 35296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 41457 - 41577
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||| | |||||| | || || ||||||||| |||||||||||| ||||||||| || ||||||||||| |||    
T  41457 acaattaatatgaacatggttgtactctaacaaattcatatcaaggattacatccataccactcaaaggtaaacaaactaagtcaatttcaaaatcacga 41556  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  41557 tcaaacatagacaaaggacat 41577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 75177 - 75297
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||| | |||||| | || || ||||||||| |||||||||||| ||||||||| || ||||||||||| |||    
T  75177 acaattaatatgaacatggttgtactctaacaaattcatatcaaggattacatccataccactcaaaggtaaacaaactaagtcaatttcaaaatcacga 75276  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  75277 tcaaacatagacaaaggacat 75297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 41440 - 41354
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| |||||||| || ||||||||||||||||||||| ||||| | ||||| || |||||||    
T  41440 atttctcttctgctgaagaggaaagtggcgcagagttcttgtctactaagcagctgaagcaattagaatgtgatggaatcttgatgt 41354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 75160 - 75074
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| |||||||| || ||||||||||||||||||||| ||||| | ||||| || |||||||    
T  75160 atttctcttctgctgaagaggaaagtggcgcagagttcttgtctactaagcagctgaagcaattagaatgtgatggaatcttgatgt 75074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 11359 - 11239
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| |||||||| |||    
T  11359 acaattaatgtgaacatggttgtattccaaccagttcataccaagaatcacatccataccactgaaaggtagacaaaccaaatccatctcaaaatcacga 11260  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  11259 tcaaacatagacaaaggacat 11239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 10611 - 10731
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||||||||| ||||||||||| |||    
T  10611 acaattaatgtgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaactaaatcaatttcaaaatcacga 10710  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||| ||||||    
T  10711 ccaaacatagacaatggacat 10731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 10594 - 10534
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagca 200  Q
    |||||||||| |  |||||||||||| | | ||||||||| ||||||||||||||||||||    
T  10594 atttctcttctgcggaagaggaaagtagcgtagagtttttgtctactaagcagctgaagca 10534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 65; Significance: 1e-28; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 8775 - 8895
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||| | |    
T  8775 acaattaatgtgaacatggttgtattccaaccagttcataccaagaatcacatccataccactcaaaggtaaacaaactaaatccatctcaaaatcacaa 8874  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  8875 tcaaacatagacaaaggacat 8895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 17971 - 18065
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaat 115  Q
    |||||||||  |||| |||||||| || ||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  17971 acaattaatgtgaacatggttgtattccaaccagttcataccaagaatcacatccataccactcaaaggtaaacaaactaaatccatctcaaaat 18065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 8758 - 8706
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcag 192  Q
    |||||||||| |  |||||||||||||| ||||| ||||| ||||||||||||    
T  8758 atttctcttctgctgaagaggaaagtggcgcagattttttgtctactaagcag 8706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 17954 - 17902
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcag 192  Q
    |||||||||| |  |||||||||||||| ||||| ||||| ||||||||||||    
T  17954 atttctcttctgctgaagaggaaagtggcgcagattttttgtctactaagcag 17902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 13958 - 13838
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||||||||| |||| |||||| |||    
T  13958 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaactaaatcaattttaaaatctcga 13859  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||| ||||||    
T  13858 ccaaacatagacaatggacat 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 13989 - 14061
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| ||| | || || ||||||||||||||||||| | ||||||| ||||| || |||||||    
T  13989 gaagaggaaagtggcgcataattcttgtctactaagcagctgaagctattagaacgtgatggaattttgatgt 14061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 65; Significance: 1e-28; HSPs: 4)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 6698 - 6818
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||| || || ||||||||||| |||    
T  6698 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaaccaagtcaatttcaaaatctcga 6797  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  6798 ccaaacatagacaaaggacat 6818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 13828 - 13948
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||| || || ||||||||||| |||    
T  13828 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaaccaagtcaatttcaaaatctcga 13927  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  13928 ccaaacatagacaaaggacat 13948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 6681 - 6606
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    |||||||||| |  ||||||||||||||  ||||||| |||||||| ||||||||||||||| ||||||| |||||    
T  6681 atttctcttctgctgaagaggaaagtggcacagagttcttatctaccaagcagctgaagcaattagaacgtgatgg 6606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 13811 - 13736
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    |||||||||| |  ||||||||||||||  ||||||| |||||||| ||||||||||||||| ||||||| |||||    
T  13811 atttctcttctgctgaagaggaaagtggcacagagttcttatctaccaagcagctgaagcaattagaacgtgatgg 13736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 37299 - 37179
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| |||||||||||||||||||||||| | |||||||||||||||||||| ||||| |  ||||| |||    
T  37299 acaattaatgtgaacatggttgtattccaaccagttcatacccagaatcacatccataccgctcaaaggtagacaaactaagtccatcttgaaatcacga 37200  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  37199 ccaaacatagacaaaggacat 37179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 37316 - 37402
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| || |||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||    
T  37316 atttctcctcagtcgaagaggaaagtggtgcagagttcttgtctactaagcagctgaagcaactggaacgcgatggtattttgatgt 37402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 24012 - 23892
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||| ||||| ||||||||||| |||    
T  24012 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaaccaaatcaatttcaaaatctcga 23913  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||| ||||    
T  23912 ccaaacatagacaaagaacat 23892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 24043 - 24103
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatg 214  Q
    |||||||||||||| |||||||| || ||||| ||||||||||||||| ||||||| ||||    
T  24043 gaagaggaaagtggcgcagagttcttgtctaccaagcagctgaagcaattagaacgtgatg 24103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 12471 - 12385
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| |||||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||| |||||||    
T  12471 atttctcctccgtcaaagaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactagaacgcgatggtattttgatgt 12385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 12488 - 12611
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||| ||| ||||| || |||||| |||||||||| |  ||||| | ||| || |||||||| |||    
T  12488 acaattaatatgaacatggttgtactctaaccaattcagaccaagaatgacgtccataccactcaaaggcaagcaaaccatatcaatctcaaaatcacga 12587  T
Q  121 ccgaacatagacaaaggacatttc 144  Q
    || |||||||||||||||||||||    
T  12588 ccaaacatagacaaaggacatttc 12611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 15469 - 15379
Alignment:
Q  25 ttaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaat 115  Q
    |||||| |||| ||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  15469 ttaatatgaacatggttgtactctaaccaattcatacctagaatcacatccataccgctcaaaggtagacaaactaaatccatttcgaaat 15379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 15490 - 15576
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||||    
T  15490 atttctctttcgtcgaagaggaaagtggtgcagagttcttatctaccaagcagctgaagcaactggaacgtgatggtattttgatgt 15576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 27991 - 28077
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||| |||||||    
T  27991 atttctcttccgtagaagaggaaagtggtgcagagttcttatctaccaagcagctgaagcaactgaaacgcgatggtattttgatgt 28077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 141
Target Start/End: Original strand, 1 - 86
Alignment:
Q  56 tcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggacat 141  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  1 tcatacccagaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcatgaccaaacatagataaaggacat 86  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 14745 - 14625
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| ||||| || || || || |||||  |||||||||||| |||||| ||||| ||||||||||| |||    
T  14745 acaattaatatgaacatggttgtactctaaccagttcattccaaggattacttccattccactcaaaggtaaacaaaccaaatcaatttcaaaatctcga 14646  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  14645 ccaaacatagacaaaggacat 14625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 14776 - 14837
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    |||||||||||||| ||| | || || ||||||||||||||||||||| ||||||| |||||    
T  14776 gaagaggaaagtggcgcataattcttgtctactaagcagctgaagcaattagaacgtgatgg 14837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 18475 - 18595
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||| || || ||||||||| |||||||||||| |||||| ||||| ||||||||||| | |    
T  18475 acaattaatgtgaacatggttgtactctaaccagttcataccaaggattacatccataccactcaaaggtaaacaaaccaaatcaatttcaaaatcacaa 18574  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  18575 tcaaacatagacaaaggacat 18595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 18458 - 18372
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||||||||||| |||||||||||||||||| |  ||||||| ||||| || |||||||    
T  18458 atttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagtagttagaacgtgatggaattttgatgt 18372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 24424 - 24304
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| ||||| || ||||||||||||||| |||||||||||| |||||| ||||| ||   |||||| |||    
T  24424 acaattaatatgaacatggttgtactctaaccagttcatgccaagaatcacatccataccactcaaaggtaaacaaaccaaatcaatcctaaaatcacga 24325  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  24324 tcaaacatagacaaaggacat 24304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 24441 - 24526
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatg 225  Q
    |||||||||| |  |||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||| ||||| || ||||||    
T  24441 atttctcttctgctgaagagaaaagtggtgcagagtttttgtctactaagcagctgaagcagttagaacgtgatggaattttgatg 24526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 8048 - 8168
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||| ||||| ||||||||| ||||||| ||||||||||| ||||  || |||||||| |||    
T  8048 acaattaatgtgaacatggttgtactctaaccagttcataccaagaattacatccatagcactcaacggtagacaaaccaaatgaatctcaaaatcacga 8147  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  8148 tcaaacatagacaaaggacat 8168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 8031 - 7945
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||||||||||| || | |||||||||||||||  ||||||| |||||||| |||||||    
T  8031 atttctcttctgctgaagaggaaagtggcgcagagtttttgtcaattaagcagctgaagcagttagaacgtgatggtattttgatgt 7945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 5938 - 6058
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||||| |||| |||||||||| ||||||||||| || ||||||||  |||||||||||| |||||| ||||| ||||||| ||| |||    
T  5938 acaattaatatgaacgttgttgcactctaaccagttcatacccaggattacatccattccactcaaaggtaaacaaaccaaatcaatttcaacatctcga 6037  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||| ||||||||||||    
T  6038 ccaaacattgacaaaggacat 6058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 5921 - 5846
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    |||| ||||| || ||||| |||||||| |||||||| |||||||||||||||||||||||| ||||||| |||||    
T  5921 atttttcttcggttgaagaagaaagtggagcagagttcttatctactaagcagctgaagcaattagaacgtgatgg 5846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 17703 - 17823
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| || |||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||| ||||| |||||||| || |||    
T  17703 acaattaatatgaacatgattgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaaccaaatcaatttcaaagtctcga 17802  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||||||||    
T  17803 ccaaacatagacaaaggacat 17823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 111386 - 111270
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| ||||| || ||||||||||||||| |||||||||||| |||||| || || ||||||||||| |||    
T  111386 acaattaatatgaacatggttgtactctaaccagttcatgccaagaatcacatccataccactcaaaggtaaacaaaccaagtcaatttcaaaatcacga 111287  T
Q  121 ccgaacatagacaaagg 137  Q
     | |||||| |||||||    
T  111286 tcaaacataaacaaagg 111270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 17666 - 17600
Alignment:
Q  160 gaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| || |||||||    
T  17666 gaaagtggagcagagtttttgtctactaagtagctgaagcaattagaacgcgatggaattttgatgt 17600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 111403 - 111478
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    |||||||||| |  ||| |||||||||| ||||||||||| ||||||||||||||||||||  ||||||| |||||    
T  111403 atttctcttctgctgaaaaggaaagtggcgcagagtttttgtctactaagcagctgaagcagttagaacgtgatgg 111478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 216899 - 216779
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||| ||||| |||| |||||| |||    
T  216899 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaaccaaatcaattttaaaatctcga 216800  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || | ||||||||||||||||    
T  216799 ccaatcatagacaaaggacat 216779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 216930 - 217002
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||| ||||||||| ||| | || || ||||||||||||||||| ||| ||||||||||||| || |||||||    
T  216930 gaagcggaaagtggcgcaaaattcttgtctactaagcagctgaaacaattagaacgcgatgggattttgatgt 217002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 495845 - 495965
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||| ||||| |||| |||||| |||    
T  495845 acaattaatatgaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaaccaaatcaatttaaaaatctcga 495944  T
Q  121 ccgaacatagacaaaggacat 141  Q
    || ||||||||||||| ||||    
T  495945 ccaaacatagacaaagaacat 495965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 495814 - 495742
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||| |||||||| |||||||| || ||||| ||||||||||||||| ||||||| ||||| || |||||||    
T  495814 gaagatgaaagtggcgcagagttcttgtctaccaagcagctgaagcaattagaacgtgatggaattttgatgt 495742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 441493 - 441441
Alignment:
Q  145 tcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaa 197  Q
    ||||| |||||||| || ||||| |||||||| || |||||||||||||||||    
T  441493 tcttctgtcgaagaagagagtggagcagagttcttgtctactaagcagctgaa 441441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 637 - 551
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| || |||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||| |||||||    
T  637 atttctcctcagtcgaagaggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactggaacgcgatggtattttgatgt 551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 654 - 726
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtaga 93  Q
    |||||||||  |||| |||||||| || ||||| |||||||||||||||||||||||| | ||||||||||||    
T  654 acaattaatgtgaacatggttgtattccaaccagttcatacccagaatcacatccataccgctcaaaggtaga 726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 8217 - 8140
Alignment:
Q  64 agaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggacat 141  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  8217 agaatcacatccataccgctcaaaggtagacaaactaaatccatttcaaaatcacgaccaaacatagacaaagaacat 8140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 857 - 737
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||| ||||||||||||| |||||||||| ||||||||||||| ||| |||||||| |||||| | ||| || |||||||| |||    
T  857 acaattaatgtgaacatggatgtactctaaccagttcatacccataatcacatccataccacccaaaggtaaacaaaccatatcaatctcaaaatcacga 758  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  757 tcaaacatagacaaaggacat 737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 888 - 960
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| | | ||||||||||||| ||||||||||||||  ||||||| ||||| || |||||||    
T  888 gaagaggaaagtggcgaaaagtttttatctacaaagcagctgaagcagttagaacgtgatggcattttgatgt 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 4259 - 4379
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| ||  | || |||||||||| |||| |||||||||||| |||||| ||||| || |||||||| |||    
T  4259 acaattaatatgaacatggttgtactctaaccaatttttgccaagaatcacattcataccactcaaaggtaaacaaaccaaatcgatctcaaaatcacga 4358  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  4359 tcaaacatagacaaaggacat 4379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 4242 - 4156
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  ||||||||||||||  |||||||||| ||||||||||||||||||||  ||||||  ||||| || |||||||    
T  4242 atttctcttctgctgaagaggaaagtggcacagagtttttgtctactaagcagctgaagcagttagaacatgatggaatcttgatgt 4156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 2726 - 2622
Alignment:
Q  37 tggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaag 136  Q
    |||||||| || ||||| |||||||| ||||||||||||||| |||||||||||| |||||| ||||| || |||||||| ||| | |||||||||||||    
T  2726 tggttgtattccaaccagttcataccaagaatcacatccataccactcaaaggtaaacaaaccaaatctatctcaaaatcacgatcaaacatagacaaag 2627  T
Q  137 gacat 141  Q
    |||||    
T  2626 gacat 2622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 1277 - 1397
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| | || ||||||||||||||||| ||||| || |||||||||||| || |||||||||||| |||||| ||||| || |||||||| |||    
T  1277 acaattaatatggacatggttgtactctaaccagttcatgccaagaatcacatccgtaccactcaaaggtaaacaaaccaaatcaatctcaaaatcacga 1376  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | | ||||||||||||||||    
T  1377 tcaagcatagacaaaggacat 1397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 1260 - 1174
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| | ||||||||| |||||||||||| |||||||  ||||||| ||||| || |||||||    
T  1260 atttctcttctgctgaagaggaaagtggcgtagagtttttgtctactaagcagttgaagcagttagaacgtgatggaatcttgatgt 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 13909 - 14029
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| ||||| || ||||| || |||    
T  13909 acaattaatgtgaacatggttgtactctaaccagttcataccaagaattacatccataccactcaaaggtagacaaaccaaatcaatctcaaagtcacga 14008  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | || |||||||||| ||||    
T  14009 tcaaaaatagacaaagaacat 14029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 8830 - 8770
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagca 200  Q
    |||||||||| |  |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  8830 atttctcttctgctgaagaggaaagtggcgcagagtttttgtctaccaagcagctgaagca 8770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 57; Significance: 6e-24; HSPs: 6)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 151906 - 152026
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||| || ||||| |||||||| ||||||||||||||| |||| ||||||| |||||| ||||| || |||||||| |||    
T  151906 acaattaatgtgaacatggttgtattccaaccagttcataccaagaatcacatccataccactaaaaggtaaacaaaccaaatcaatctcaaaatcacga 152005  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  152006 tcaaacatagacaaaggacat 152026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 1984 - 1907
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaac 98  Q
    |||||||||| |||| ||||||||||||||||| ||||||||| | || ||||||||| |||||||||| | ||||||    
T  1984 acaattaatatgaacatggttgtactctaaccaattcataccctggattacatccataccactcaaagggaaacaaac 1907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 151875 - 151803
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||  | ||||| ||||| || |||||||    
T  151875 gaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagttggaacgtgatggcattttgatgt 151803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 47460 - 47535
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatgg 215  Q
    |||||||||| |  |||||||||||||| ||||||||||  ||||||||||||||||||||  ||||||| |||||    
T  47460 atttctcttctgctgaagaggaaagtggcgcagagttttagtctactaagcagctgaagcagttagaacgtgatgg 47535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 2030 - 2087
Alignment:
Q  169 gcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||| ||||||||||| |||||||||||| ||||||| |||||||| |||||||    
T  2030 gcagagttcttatctactaaacagctgaagcaattagaacgtgatggtattttgatgt 2087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 47399 - 47342
Alignment:
Q  83 tcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggaca 140  Q
    |||||||||||||||| ||||| ||||||||||| ||| | |||||||||||| ||||    
T  47399 tcaaaggtagacaaaccaaatcaatttcaaaatcacgatcaaacatagacaaaagaca 47342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1985 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold1985
Description:

Target: scaffold1985; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 68 - 154
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| || | ||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  68 atttctcatcagacgaagaggaaagtggtgcagagttcatatctactaagcagctgaagcaaatggaacgagatggtatattgatgt 154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1985; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 51 - 1
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcac 71  Q
    |||||||||| |||| ||||||||||| ||||| |||||||||||||||||    
T  51 acaattaatatgaacatggttgtactccaaccaattcatacccagaatcac 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 15258 - 15367
Alignment:
Q  32 gaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacataga 131  Q
    |||| ||||||||||||||||| |||||||| || || ||||||||  |||||||||||| |||||| ||||| ||||||||||| ||||| | | ||||    
T  15258 gaacatggttgtactctaaccagttcataccaaggattacatccattccactcaaaggtaaacaaaccaaatcaatttcaaaatctcgaccaatcgtaga 15357  T
Q  132 caaaggacat 141  Q
    ||||||||||    
T  15358 caaaggacat 15367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 104063 - 104172
Alignment:
Q  32 gaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacataga 131  Q
    |||| ||||||||||||||||| ||||||||||  || ||||||||  |||||||||||| |||||| || || ||||||||||| ||| | ||||||||    
T  104063 gaacatggttgtactctaaccagttcatacccatgattacatccatgccactcaaaggtaaacaaaccaagtcaatttcaaaatcacgatcaaacataga 104162  T
Q  132 caaaggacat 141  Q
    ||||||||||    
T  104163 caaaggacat 104172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 104035 - 103949
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||| ||||| || |||||||    
T  104035 atttctcttctgctgaagaggaaagtggcgcagagtttttgtctaccaagcagctgaagcaattagaacgtgatggaattttgatgt 103949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 12693 - 12573
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||||||||||||||| | ||| || ||||| | ||||||| ||||||||||||  ||||| ||||| ||||||||||  |||    
T  12693 acaattaatatgaacatggttgtactctaaccagtgcatgccaagaattatatccataccactcaaaggtaagcaaaccaaatcaatttcaaaattacga 12594  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  12593 tcaaacatagacaaaggacat 12573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 12710 - 12795
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  ||||||||||||||||||||||| | |||||||||||||||||||||  ||||||| ||||| || |||||||    
T  12710 atttctcttctgctgaagaggaaagtggtgcagagttct-atctactaagcagctgaagcagttagaacgtgatggaatcttgatgt 12795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 1865 - 1934
Alignment:
Q  72 atccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggacat 141  Q
    ||||||| | |||||||||| |||||| | ||| || |||||||| ||| | ||||||||||||||||||    
T  1865 atccataccgctcaaaggtaaacaaaccatatcaatctcaaaatcacgatcaaacatagacaaaggacat 1934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 861 - 965
Alignment:
Q  37 tggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaag 136  Q
    |||||||| || ||||| |||||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||||||| | | | ||||||||||||     
T  861 tggttgtattccaaccaattcataccaagaatcacatccataccactcaaatgtagacaaaccaaatccatctcaaaatcactatcaaacatagacaaat 960  T
Q  137 gacat 141  Q
    |||||    
T  961 gacat 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 55949 - 55829
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| |||||||||| |||||| |||||||| || || ||||||||| |||||||||||| |||||| ||||| ||||  ||||| |||    
T  55949 acaattaatgtgaacatggttgtactttaaccagttcataccaaggattacatccataccactcaaaggtaaacaaaccaaatcaatttagaaatcacga 55850  T
Q  121 ccgaacatagacaaaggacat 141  Q
     | ||||||||||||||||||    
T  55849 tcaaacatagacaaaggacat 55829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 55980 - 56052
Alignment:
Q  154 gaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||||||| ||| ||||||| |||||||| |||||||||||  ||||||| |||||||| |||||||    
T  55980 gaagaggaaagtggcgcaaagtttttgtctactaaacagctgaagcagttagaacgtgatggtattttgatgt 56052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 807 - 926
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||||| || || ||||||||| |||||||| ||| |||||| || || || |||||||| |||    
T  807 acaattaatgtgaacatggttgtactctaaccagttcataccaaggattacatccataccactcaaacgtaaacaaaccaattcaatctcaaaatcacga 906  T
Q  121 ccgaacatagacaaaggaca 140  Q
     | |||||||||||||||||    
T  907 tcaaacatagacaaaggaca 926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 675 - 604
Alignment:
Q  155 aagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||||  ||||||| ||||| || |||||||    
T  675 aagaggagagtggcgcagagtttttgtctactaagcagctgaagcagttagaacgtgatggaattttgatgt 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 707 - 778
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtag 92  Q
    |||||||||  |||| | ||||||||||||||| |||||||| || || ||||||||| |||||||| ||||    
T  707 acaattaatgtgaacatagttgtactctaaccagttcataccaaggattacatccataccactcaaacgtag 778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 4408 - 4526
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||  |||| ||||||||||||||||| |||||  | ||||| ||||||||| ||| |||||||| |||||| ||||| |||||||||||  ||    
T  4408 acaattaatgtgaacatggttgtactctaaccagttcatgacaagaattacatccataccacacaaaggtaaacaaaccaaatcaatttcaaaatcatga 4507  T
Q  121 ccgaacatagacaaaggac 139  Q
     | ||||||||||||||||    
T  4508 tcaaacatagacaaaggac 4526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 4391 - 4317
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatg 214  Q
    |||||||||| |  |||||||||||| | |||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  4391 atttctcttctgctgaagaggaaagttgcgcagagttcttatctactaaacagctgaagcaattagaacgtgatg 4317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 52430 - 52507
Alignment:
Q  149 ccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||||||||||| |||||| || ||||| |||||||||||||| || |||||||||||||| |||||||    
T  52430 ccgtcgaagaggaaagtggtgtagagttcttgtctaccaagcagctgaagcagctggaacgcgatggtatgttgatgt 52507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 4913 - 5032
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcga 120  Q
    |||||||||| |||| ||||| ||||| ||||| |||||||| || || ||||||||  |||||||||  | |||||||||||| |||||||| || |||    
T  4913 acaattaatatgaacatggttatactccaaccagttcataccaaggattacatccattccactcaaagacaaacaaactaaatcaatttcaaagtctcga 5012  T
Q  121 ccgaacatagacaaaggaca 140  Q
    || ||||| |||||||||||    
T  5013 ccaaacatcgacaaaggaca 5032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 58059 - 57973
Alignment:
Q  55 ttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggacat 141  Q
    |||||||| || |||||||||||  | |||||||||| |||||| ||||| ||||||||||| ||||| ||||||||||||||||||    
T  58059 ttcataccaaggatcacatccattccgctcaaaggtaaacaaaccaaatcaatttcaaaatctcgaccaaacatagacaaaggacat 57973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 273 - 361
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttat--ctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||||||||||| |  |||| |||||||||||||||||||||||| ||||||| |||||||    
T  273 atttctcttctgctgaagaggaaagtggcgcagagtttttttgtctaccaagcagctgaagcaactagaacgcaatggtattttgatgt 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 17799 - 17714
Alignment:
Q  49 aaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaa 134  Q
    ||||| |||||||| | ||||||||||||| ||||||||||||  |||||||||||||| |||||||| ||| | |||||||||||    
T  17799 aaccagttcataccaataatcacatccataccactcaaaggtaagcaaactaaatccatctcaaaatcacgatcaaacatagacaa 17714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 17839 - 17925
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||||  | ||||| ||||| || |||||||    
T  17839 atttctcttctgctgaagaggaaagtggcgcagagtttttgtctactaagcagctgaagcagttggaacgtgatggcattttgatgt 17925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 1244 - 1315
Alignment:
Q  155 aagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||  ||||||| |||||||| |||||||    
T  1244 aagaggaaagtggcgcagagtttttgtctactaagtagctgaagcagttagaacgtgatggtattttgatgt 1315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 7155 - 7241
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| | ||| ||||| ||||||||||||||||||||  ||||||| |||||||| |||||||    
T  7155 atttctcttctgctgaagaggaaagtggcggagaatttttgtctactaagcagctgaagcagttagaacgtgatggtattttgatgt 7241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 6583 - 6669
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| | |||||| |||||||||||||||||||||||  ||||||| ||||| || |||||||    
T  6583 atttctcttctgctgaagaggaaagtggcgtagagttcttatctactaagcagctgaagcagttagaacgtgatggaattttgatgt 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 6566 - 6489
Alignment:
Q  21 acaattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaac 98  Q
    |||||||||| |||| |||||||||| |||||| |||||||| || || ||||||||| |||||||||||| ||||||    
T  6566 acaattaatatgaacatggttgtactataaccagttcataccaaggattacatccataccactcaaaggtaaacaaac 6489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 40973 - 40889
Alignment:
Q  32 gaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatc 116  Q
    |||| ||||||||||||||||| |||||||| ||||| | ||||||| |||||||||||| |||||| | ||| || ||||||||    
T  40973 gaacatggttgtactctaaccagttcataccaagaattaaatccataccactcaaaggtaaacaaaccatatcaatctcaaaatc 40889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 41001 - 41087
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaagcaactagaacgcgatggtatattgatgt 226  Q
    |||||||||| |  |||||||||||||| ||| ||||||| |||||||| ||  ||||| |  ||||||| |||||||| |||||||    
T  41001 atttctcttctgctgaagaggaaagtggcgcaaagtttttgtctactaaacatttgaagtagttagaacgtgatggtattttgatgt 41087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 11656 - 11753
Alignment:
Q  43 tactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaaggaca 140  Q
    ||||||||||| |||||||| | ||||||||||||| |  |||| || |||||||||||||| ||  ||||||| | ||| |||||||| | ||||||    
T  11656 tactctaaccaattcataccaaaaatcacatccatacccgtcaacggcagacaaactaaatcaatcacaaaatctctaccaaacatagatataggaca 11753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 1345 - 1242
Alignment:
Q  38 ggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgaccgaacatagacaaagg 137  Q
    |||| ||||||||||| ||||| || | ||| ||||||||| |  |||| |||| ||||||||| |||| |||||| || | ||| ||||||||||| ||    
T  1345 ggttatactctaaccagttcatcccaaaaataacatccatacccgtcaacggtaaacaaactaagtccacttcaaagtctctaccaaacatagacaacgg 1246  T
Q  138 acat 141  Q
    ||||    
T  1245 acat 1242  T

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Target: scaffold0331 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 15475 - 15532
Alignment:
Q  140 atttctcttccgtcgaagaggaaagtggtgcagagtttttatctactaagcagctgaa 197  Q
    |||| ||||| |||||||| || ||||| |||||||| || |||||||||||||||||    
T  15475 atttttcttctgtcgaagaagagagtggagcagagttcttgtctactaagcagctgaa 15532  T

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Target: scaffold1288 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 333 - 221
Alignment:
Q  22 caattaataagaacgtggttgtactctaaccatttcatacccagaatcacatccatatcactcaaaggtagacaaactaaatccatttcaaaatcgcgac 121  Q
    ||||||||| ||||  |||| ||| ||||||| ||||| || | ||||||||||||| |  |||| |||| ||||||||| || | |||||| || | ||    
T  333 caattaatatgaactcggttataccctaaccagttcatcccaaaaatcacatccatacccgtcaacggtaaacaaactaagtcgacttcaaagtctctac 234  T
Q  122 cgaacatagacaa 134  Q
    | |||||||||||    
T  233 caaacatagacaa 221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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