View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6872A_low_245 (Length: 241)
Name: NF6872A_low_245
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6872A_low_245 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 2727702 - 2727939
Alignment:
| Q |
1 |
ataaaaaatcattacactatcggtgcatatacggaattagatccttatagttat--ggaagtttcacgtgctacaattcataccttcctaatccaaatgg |
98 |
Q |
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| T |
2727702 |
ataaaaaatctttacactgtcggtgcatatacggaattaaatccttatagttatatggaagtttcacgtgctacaattcataccttcctaatccaaatgg |
2727801 |
T |
|
| Q |
99 |
caagttagggccaccaacagaattatttctagatgtcctaaggagtaaagtaccaagcaatatcaaaggaaatgccaaatttcccaaaagatcaagcaat |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
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| T |
2727802 |
caagttagggccaccaacagaattatttctagatgtcctaaggagtaaagtaccaagcaatatcaaaggaaatgccaaatttcccaaaagatcaagtatt |
2727901 |
T |
|
| Q |
199 |
gcaactccccaatttgtatccataggataaacaccaaa |
236 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
2727902 |
gcaactccccaatttgtatccataggataaacaccaaa |
2727939 |
T |
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