View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6872A_low_261 (Length: 234)
Name: NF6872A_low_261
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6872A_low_261 |
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Alignment Details
Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 32096357 - 32096526
Alignment:
| Q |
48 |
aacattaccataacatcaagcaacaatccttctctatgcaaacactcaatctccaacaaagcatcactctcaataatcgaaacctgaaccgacgaaacaa |
147 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32096357 |
aacattaccataacgtcaagcaacaatccttctctatgcaaacactcaatctccaacaaagcatcactctcaataatcgaaacctgaaccgacgaaacaa |
32096456 |
T |
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| Q |
148 |
cctccgtctcaactgctttcgctctcgtggctccacactcttccacaatcctcacctttttcttttctgt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32096457 |
cctccgtctcaactgctttcgctctcgtggctccacactcttccacaatcctcacctttttcttatctgt |
32096526 |
T |
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