View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6872A_low_314 (Length: 225)
Name: NF6872A_low_314
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6872A_low_314 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 14 - 205
Target Start/End: Complemental strand, 40225587 - 40225396
Alignment:
| Q |
14 |
aacaatatccccttatcctttcatctctgttcccttcttccattacaaaaattcattgaagcttggttaagaaatagctttgtcttttcaccatcattct |
113 |
Q |
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| T |
40225587 |
aacactatacccttatcctttcatctctgttcccttcttccattacaaaaattcattgaagcttggttaagaaatagctttgtcttttcaccatcattct |
40225488 |
T |
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| Q |
114 |
ctcattaaactcaaaccttacgttacgcccacgctcttggtcaatttttgtaagtaattttttcctccacttatatatttggtgctatagct |
205 |
Q |
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| T |
40225487 |
ctcattaaactcaaaccttacgttacgcccacgttcttggtcaatttttgtaagtaattttttcctccacttatatatttggtgctatagct |
40225396 |
T |
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