View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6872A_low_332 (Length: 217)
Name: NF6872A_low_332
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6872A_low_332 |
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Alignment Details
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 47358642 - 47358771
Alignment:
| Q |
58 |
atttgtacaaagctttacaagtcaggcagacccaccagagatggcctaaaaggacagtgatgatgaaccacatgcatgcatgtttatgtttatctataat |
157 |
Q |
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| T |
47358642 |
atttatacaaagctttacaagtcaggcagacccaccagagatggcctaaaaggacagtgatgatgaaccacatgcatgcatgtttatgtttatctataat |
47358741 |
T |
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| Q |
158 |
agcaaaactttagggtactcatcatgtaat |
187 |
Q |
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| T |
47358742 |
agcaaaactttagggtactcatcatgtaat |
47358771 |
T |
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