View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6872A_low_63 (Length: 345)
Name: NF6872A_low_63
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6872A_low_63 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 19 - 345
Target Start/End: Complemental strand, 2730795 - 2730469
Alignment:
| Q |
19 |
atcagaaaatggtctcgagagagagtggcaaggaggagaagagtatggcttcaagtgtttggaatcccccttcatgcatgagaggaagggttcttcaagc |
118 |
Q |
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| T |
2730795 |
atcataaaatggtctcgagagaaagtggcaaggaggagaagagtatggcttcaagtgtttggaatcccccttcatgcatgagaggaagggttcttcaacc |
2730696 |
T |
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| Q |
119 |
ttcttgattcaaagttcagtgaattcatagattttacggtgatacaattcaaaggaaccatctagatgtggcatagatcctagtgtttttctcttaaaac |
218 |
Q |
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| T |
2730695 |
ttcttgattcaaagttcagagaattcatagattttacagtgatacaattcaaaggaaccatctagatgtggcatagatcctagtgtttttctcttaaaat |
2730596 |
T |
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| Q |
219 |
ggggttgataggtggatctttcaccatttcaattgtaggtaaaaggtacaagatatgggtgaaggaagaagatttacggtggatgaatgggcggaggaac |
318 |
Q |
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| T |
2730595 |
ggggttaataggtggatctttcaccatttcaattgtaggtataaggtacaagatatgggtgaaggaagaagatttacggtggatgaatgggcggaggaac |
2730496 |
T |
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| Q |
319 |
aacggtgaaggtagttcgattgagggt |
345 |
Q |
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| T |
2730495 |
aacagtgaaggtagttcgattgagggt |
2730469 |
T |
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