View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6872A_low_93 (Length: 311)
Name: NF6872A_low_93
Description: NF6872A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6872A_low_93 |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 44999145 - 44999347
Alignment:
| Q |
1 |
agaggcacacaaaccaagctatgggcgcaacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatatagaaggaagg |
100 |
Q |
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| T |
44999145 |
agaggcacacaaaccaagctatgggcgcaacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatatagaaggaagg |
44999244 |
T |
|
| Q |
101 |
aaaaaataaataaataaagaaatgtgagaacgttatatagaaaggggaacctccattgccacaatccactgaggacaatttgatccataaactccaattc |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44999245 |
aaaaaataaataaat----aaatgtgagaacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataaactccaattc |
44999340 |
T |
|
| Q |
201 |
gtgagcc |
207 |
Q |
| |
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||||||| |
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| T |
44999341 |
gtgagcc |
44999347 |
T |
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