View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6873A_low_132 (Length: 244)
Name: NF6873A_low_132
Description: NF6873A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6873A_low_132 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 36970266 - 36970043
Alignment:
| Q |
1 |
tgtgctaattagcacaaattaaaggtaatttttgcagaaggtatgtttcgaaatcgaaatcctatataattccatgagattattgtgaagattgttgtaa |
100 |
Q |
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| T |
36970266 |
tgtgctaattagcacaaattaaaggtaatttttgcagaaggtatgtttcgaaatcgaaatcctatataattccatgagattattgtgaagattgttgtaa |
36970167 |
T |
|
| Q |
101 |
ttaattagcaaaatatgtctttaaaaagaatgttgggaaatttttgtaagggttagtaaatttgaccaatctagatccagcttactaatatcgttcaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36970166 |
ttaattagcaaaatatgtctttaaaaagaatgttgggaaatttttgtaagggttagtaaatttgaccaatctagatccagcttactaatatcgttcaaat |
36970067 |
T |
|
| Q |
201 |
tttgctaggttttgaattgagttg |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
36970066 |
tttgctaggttttgaattgagttg |
36970043 |
T |
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