View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6873A_low_157 (Length: 227)
Name: NF6873A_low_157
Description: NF6873A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6873A_low_157 |
 |  |
|
| [»] scaffold0182 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 106; Significance: 3e-53; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21714094 - 21714307
Alignment:
| Q |
1 |
tatattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacaga |
100 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||| | |
|
|
| T |
21714094 |
tatattgaatgaaggatggcatcccaaactattaaagaaaaatttgtggagctacaaaaatcaatgcaaacaccccaaaattcacgaccgaagatacaaa |
21714193 |
T |
 |
| Q |
101 |
gggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccaacatgacaatccaaatctgaa |
200 |
Q |
| |
|
||||| || | | ||| |||| |||||| ||||||| ||||||| || ||||| |||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
21714194 |
gggtggttgaccgtttcagaaatagaacaaattttgagaagcattactcacccaagtttgtgtcattaggtcctatccatcatgacaatccaaatctgaa |
21714293 |
T |
 |
| Q |
201 |
gataggagagaagt |
214 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
21714294 |
gaaaggagagaagt |
21714307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 21788152 - 21788361
Alignment:
| Q |
13 |
atgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatc |
112 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||| || ||||| |||||| |||| |
|
|
| T |
21788152 |
atgatggcatcccaaactattaatgaaaaatttgtggagttacaaaaatcaaagcaaacaccccaaaattcacgaccgaaaatacaaagggtggcagagt |
21788251 |
T |
 |
| Q |
113 |
atctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccaacatgacaatccaaatctgaagataggagagaa |
212 |
Q |
| |
|
|||||| |||| ||| || |||||| ||||||| || |||||| |||| | ||||||||||| |||||||| ||||| ||||| |||||||||| |
|
|
| T |
21788252 |
atctcagaaatagaaaaaactttgagaagcattactcgcccaagttgttgtcggtaggtcctatccatcatgacaacacaaatttgaagttaggagagaa |
21788351 |
T |
 |
| Q |
213 |
gttcaagctt |
222 |
Q |
| |
|
|| ||||||| |
|
|
| T |
21788352 |
gtacaagctt |
21788361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 21651991 - 21652179
Alignment:
| Q |
12 |
aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagat |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||| |||||| || | |
|
|
| T |
21651991 |
aatgatggcatcccaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaacaccccaaaattcacgaccaaagatacaaagggtgccacag |
21652090 |
T |
 |
| Q |
112 |
catctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccaacatgacaatccaaatctgaa |
200 |
Q |
| |
|
|||||| |||| ||| | ||||||| ||||||| || ||||| || ||| | ||||||||||| ||||||||| ||||| |||| |
|
|
| T |
21652091 |
tatctcagaaatagaaacaattttgagaaacattacacccccaagtttgtttcaataggtcctatccatcatgacaatacaaatatgaa |
21652179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 21628036 - 21628258
Alignment:
| Q |
1 |
tatattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacaga |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||| || || || | |||||||||||||||| |||| |||||||||||||||| | |
|
|
| T |
21628036 |
tatattgaaagaatgatggcatcccaaactattaaagaaaaatttgtggagttaaaaaattcaaagcaaacaccccgaaatgcacgaccaaagatacaaa |
21628135 |
T |
 |
| Q |
101 |
gggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccaacatgacaatccaaatctgaa |
200 |
Q |
| |
|
||||| | |||||||||| |||| || | ||||| | | ||||| || ||||| |||||| | ||||||||||| |||| || | |||||||||| |
|
|
| T |
21628136 |
gggtggccgatcatctcagaaataaaaaagattttgggaagtattactcacccaagtttgtgtcaataggtcctatccatcatggcagtacaaatctgaa |
21628235 |
T |
 |
| Q |
201 |
gataggagagaagttcaagcttg |
223 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
21628236 |
cataggagagaagtacaagcttg |
21628258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 67 - 222
Target Start/End: Original strand, 21646720 - 21646875
Alignment:
| Q |
67 |
caaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcat |
166 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| || | |||||| |||| |||||| ||||||| |||||||| || |||||||||||| |
|
|
| T |
21646720 |
caaacaccccaaaattcacgaccaaagatacaaagggtgccacagtatctcagaaatagaacaaaatttgaggagcattacacccccaagttggtgtcaa |
21646819 |
T |
 |
| Q |
167 |
ttggtcctatccaacatgacaatccaaatctgaagataggagagaagttcaagctt |
222 |
Q |
| |
|
| ||||||||||| |||||||||||||| ||||||||||||||||| | ||||||| |
|
|
| T |
21646820 |
taggtcctatccatcatgacaatccaaagctgaagataggagagaaatacaagctt |
21646875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 21704554 - 21704775
Alignment:
| Q |
1 |
tatattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacaga |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| || || || | |||||||||||||| | |||| |||||||||||||||| | |
|
|
| T |
21704554 |
tatattgaatgaatgatggcatcccaaactattaaagaaaaatttgtcgagttaaaaaattcaaagcaaacacctccaaatgcacgaccaaagatacaaa |
21704653 |
T |
 |
| Q |
101 |
gggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccaacatgacaatccaaatctgaa |
200 |
Q |
| |
|
||||| ||| |||||| || | ||| || |||||| ||||||| || ||||| ||||| | ||||||||||| ||||||||||||| |||||| |
|
|
| T |
21704654 |
gggtgcaagagtatctcagaagtagaaaaaactttgagcagcattactcacccaagttagtgtcgataggtcctatccatcatgacaatccaactctgaa |
21704753 |
T |
 |
| Q |
201 |
gataggagagaagttcaagctt |
222 |
Q |
| |
|
| |||||||||||| ||||||| |
|
|
| T |
21704754 |
gttaggagagaagtacaagctt |
21704775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 21785315 - 21785538
Alignment:
| Q |
2 |
atattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagataca |
98 |
Q |
| |
|
|||||||| ||||||| |||||||||||| || || ||||| ||||| ||||| || | |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21785315 |
atattgaatcaatgatgacatcccaaactacccttgaaaaaaaaattgtggagctagaaaattcaaagcaaataccccaaaattcacgaccaaagataca |
21785414 |
T |
 |
| Q |
99 |
gagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccaacatgacaatccaaatctg |
198 |
Q |
| |
|
|||||| ||| |||| | |||| | | || |||||| ||||||| || ||||| |||||| | ||||||||||| |||||||||||||||||| |
|
|
| T |
21785415 |
aagggtgcaagagtatctaagaaataggaaaaactttgagaagcattactcacccaagttagtgtcaataggtcctatccatcatgacaatccaaatctg |
21785514 |
T |
 |
| Q |
199 |
aagataggagagaagttcaagctt |
222 |
Q |
| |
|
|||| ||||||||||| ||||||| |
|
|
| T |
21785515 |
aagacaggagagaagtacaagctt |
21785538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 21763978 - 21764077
Alignment:
| Q |
3 |
tattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagg |
102 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
21763978 |
tattgaatgaatgatggcatcccaaactcttaaagaaaaatttgtggagctacaa---tcaaagcaaacaccccaaaattcacgacccaagatacaaagg |
21764074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 21771873 - 21771976
Alignment:
| Q |
2 |
atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagag |
101 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||| |||| |||||||| || |
|
|
| T |
21771873 |
atattgaatgaatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaataccccaaaattcaagaccgaagatacaaag |
21771972 |
T |
 |
| Q |
102 |
ggtg |
105 |
Q |
| |
|
|||| |
|
|
| T |
21771973 |
ggtg |
21771976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 21725808 - 21725911
Alignment:
| Q |
2 |
atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagag |
101 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| | ||||||||||| |||| |||||||| || |
|
|
| T |
21725808 |
atattgaatgaatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaatatcccaaaattcaagaccgaagatacaaag |
21725907 |
T |
 |
| Q |
102 |
ggtg |
105 |
Q |
| |
|
|||| |
|
|
| T |
21725908 |
ggtg |
21725911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 21808405 - 21808181
Alignment:
| Q |
1 |
tatattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatac |
97 |
Q |
| |
|
||||||||| |||||||| ||||||||||| || || |||| ||||| ||||| || | ||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
21808405 |
tatattgaatgaatgatggaatcccaaactacccttgaaaaaaagattgtggagctaaaaaattcaaatcaaataccccaaaattcacgaccaaagatac |
21808306 |
T |
 |
| Q |
98 |
agagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccaacatgacaatccaaatct |
197 |
Q |
| |
|
| |||||| | || |||||| |||| |||||| | ||||| ||||||| || |||||||| ||| | ||||||||||| |||| ||| |||||| |
|
|
| T |
21808305 |
aaagggtggctgagtatctcagaaatagaacaaatcttgagaagcattactcacccaagttggtatcaataggtcctatccatcatggaaatataaatct |
21808206 |
T |
 |
| Q |
198 |
gaagataggagagaagttcaagctt |
222 |
Q |
| |
|
|||| |||||||||||| ||||||| |
|
|
| T |
21808205 |
gaagttaggagagaagtacaagctt |
21808181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 222
Target Start/End: Original strand, 21681622 - 21681782
Alignment:
| Q |
62 |
caaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggt |
161 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| |||||| || || |||||||| |||||| ||| ||| |||||||| || ||||| || |
|
|
| T |
21681622 |
caaatcaaacaccccaaaattcacgaccaaagatacaaagggtgccacggtatgtcaaaaatagaacaaaatttaaggagcattacagccccaagtttgt |
21681721 |
T |
 |
| Q |
162 |
gtcatttggtcctatccaacatgacaatccaaatctgaagataggagagaagttcaagctt |
222 |
Q |
| |
|
|||| | ||||||||||| |||| |||| || |||| ||| |||||||||||| ||||||| |
|
|
| T |
21681722 |
gtcaataggtcctatccatcatggcaatacagatctaaagttaggagagaagtacaagctt |
21681782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 21745532 - 21745651
Alignment:
| Q |
90 |
aaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccaacatgacaat |
189 |
Q |
| |
|
||||||||| |||||| ||| ||||||| |||| |||||| ||||||| ||||||| || |||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
21745532 |
aaagatacaaagggtggtagaccatctcataaatagaacaaattttgagaagcattactcacccaagttggtgtcattaggtcctatccatcatgacaat |
21745631 |
T |
 |
| Q |
190 |
ccaaatctgaagataggaga |
209 |
Q |
| |
|
|||||||| |||| |||||| |
|
|
| T |
21745632 |
ccaaatctaaagacaggaga |
21745651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 21664006 - 21664230
Alignment:
| Q |
1 |
tatattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatac |
97 |
Q |
| |
|
||||||||| |||||||||||||||||||| || || ||||| ||||| ||||| || | |||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
21664006 |
tatattgaaagaatgatggcatcccaaactacccttgaaaaaaaaattgtggagctagaaaattcaaagcaaataccccaaagttcacgaccaaagatac |
21664105 |
T |
 |
| Q |
98 |
agagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccaacatgacaatccaaatct |
197 |
Q |
| |
|
| |||||| || | |||||| ||| ||| || |||||| | ||||| || ||||| ||||| | ||||||||||| |||| |||| || |||| |
|
|
| T |
21664106 |
aaagggtgccacacaatctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggcaatacagatct |
21664205 |
T |
 |
| Q |
198 |
gaagataggagagaagttcaagctt |
222 |
Q |
| |
|
|||| |||||| ||||| ||||||| |
|
|
| T |
21664206 |
gaagttaggagggaagtacaagctt |
21664230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 21992081 - 21992206
Alignment:
| Q |
1 |
tatattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatac |
97 |
Q |
| |
|
||||||||| ||||||||||||||||||| || |||||||| ||||| ||||| || | |||||||||| |||||||||||||||| || |||||| |
|
|
| T |
21992081 |
tatattgaatgaatgatggcatcccaaacttcccttgaagaaaaaattgtggagctagaaaattcaaagcaaataccccaaaattcacgaacacagatac |
21992180 |
T |
 |
| Q |
98 |
agagggtgacagatcatctcaaaaat |
123 |
Q |
| |
|
| |||||| |||| ||||||||||| |
|
|
| T |
21992181 |
aaagggtggcagagtatctcaaaaat |
21992206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21741017 - 21741087
Alignment:
| Q |
1 |
tatattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaac |
71 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| ||| ||||||||| |
|
|
| T |
21741017 |
tatattgaatgaatgatggcatcccaaactattaaagaaaaaattgtggagctacaaaaattaaagcaaac |
21741087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 222
Target Start/End: Original strand, 15713595 - 15713755
Alignment:
| Q |
62 |
caaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggt |
161 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |||||| ||| |||||| ||| | | || || |||| |||||||| || |||||||| |
|
|
| T |
15713595 |
caaagcaaacaccccaaagttcacgaccaaagatacaaagggtgccaggctatctcagaaaaagtaaaaattatgagatgcattacgcacctaagttggt |
15713694 |
T |
 |
| Q |
162 |
gtcatttggtcctatccaacatgacaatccaaatctgaagataggagagaagttcaagctt |
222 |
Q |
| |
|
||| | || |||||||| ||||||||| ||||||| ||| ||| ||||||| ||||||| |
|
|
| T |
15713695 |
ttcaataggccctatccatcatgacaatacaaatctaaagtcaggggagaagtacaagctt |
15713755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 21623257 - 21623325
Alignment:
| Q |
154 |
aagttggtgtcatttggtcctatccaacatgacaatccaaatctgaagataggagagaagttcaagctt |
222 |
Q |
| |
|
|||||||||||| | ||||||||||| |||| |||| ||||||||||| |||||||||||| ||||||| |
|
|
| T |
21623257 |
aagttggtgtcaataggtcctatccatcatggcaatacaaatctgaagttaggagagaagtacaagctt |
21623325 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 21764126 - 21764194
Alignment:
| Q |
154 |
aagttggtgtcatttggtcctatccaacatgacaatccaaatctgaagataggagagaagttcaagctt |
222 |
Q |
| |
|
|||||| ||||| | ||||||||||| ||||||| || |||||||| |||||||||||| ||||||| |
|
|
| T |
21764126 |
aagttgttgtcaataggtcctatccatcatgacagatcagatctgaagttaggagagaagtacaagctt |
21764194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 25223 - 25442
Alignment:
| Q |
3 |
tattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagg |
102 |
Q |
| |
|
||||||| |||||||||| |||||||| ||||||||||| ||| | |||||||| ||||||||||||||||||||||||||| ||| |||||||| ||| |
|
|
| T |
25223 |
tattgaatgaatgatggcagcccaaactcttaaagaaaaaattgaggagctacaaaaatcaaagcaaacaccccaaaattcaccacccaagatacaaagg |
25322 |
T |
 |
| Q |
103 |
gtgacagatcatctcaaaaatcgaacaagttttgagg-tgcattacattccgaagttggtgtcatttggtcctatccaacatgacaatccaaatctgaag |
201 |
Q |
| |
|
||| || || | | || ||| | ||| ||||||| | | |||| || |||||||||||| | ||||||||||| ||||||||| |||||||||| |
|
|
| T |
25323 |
gtggcatattaccgcagaaagataccaa-atttgaggaagtactacaaacccaagttggtgtcaataggtcctatccatcatgacaataaaaatctgaag |
25421 |
T |
 |
| Q |
202 |
ataggagagaagttcaagctt |
222 |
Q |
| |
|
|||||||||||| ||||||| |
|
|
| T |
25422 |
ttaggagagaagtacaagctt |
25442 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 34446 - 34514
Alignment:
| Q |
2 |
atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaa |
70 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| |
|
|
| T |
34446 |
atattgaatgaatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaa |
34514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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