View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6873A_low_17 (Length: 404)
Name: NF6873A_low_17
Description: NF6873A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6873A_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 4 - 350
Target Start/End: Complemental strand, 19822384 - 19822038
Alignment:
| Q |
4 |
attaacacaaatcagacaaaaattaatcaaaagcatattttacacatcaaagtcactatttataaaattaattgaagtaaacacgtatgttcttataatn |
103 |
Q |
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| T |
19822384 |
attaacacaaatcagacaaaaattaatcaaaagcatattttacacatcaaagtcactatttataaaattaattgaagtaaacacgtatgttcttataata |
19822285 |
T |
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| Q |
104 |
nnnnnnntgaaataaataaacggttcagaattgtattacccttgcaatcatggatatcccctcattgctataacggttttttcaaattttaaaagagagt |
203 |
Q |
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| T |
19822284 |
aaaaaaatgaaataaataaacggtttagaattgtattacccatgcaatcatggatatcccctcattgctataacggttttttcaaattttaaaagagagt |
19822185 |
T |
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| Q |
204 |
gtaggaaaaagtagaaaccaaataatgcttttcaaattaatccatagttaataaaacctcatccaaatattcttttagtttgaatcagccttttagtttt |
303 |
Q |
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| T |
19822184 |
gtaggaaaaagtagaaaccaaataatgcttttcaaattaatacatagctaataaaacctcatccaaatattcttttagtttgaatcagccttttagtttt |
19822085 |
T |
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| Q |
304 |
atcaatgttttattttgcatttcacacaaagtttagcagaggattgg |
350 |
Q |
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| T |
19822084 |
atcaatgttttattttgcatttcacacaaagtttagcagaggattgg |
19822038 |
T |
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