View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6873A_low_171 (Length: 217)
Name: NF6873A_low_171
Description: NF6873A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6873A_low_171 |
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Alignment Details
Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 43552117 - 43551937
Alignment:
| Q |
21 |
tttattacatatttgaatttcgtaaaatttgtcatgcattttaaatttcaaccgtttgatcttaaattaacaattaaaatt-gttgaatatgattttgtt |
119 |
Q |
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| T |
43552117 |
tttattacatatttgaatttggtaaaatttgtcatgcattttaaatttcaaccgtgtgatctcaaattaacaattaaaattaattgaatctgattttgtt |
43552018 |
T |
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| Q |
120 |
attgtttaatttgagctgtttaatatcatatgaatattcgagatagcctacaaactatgaatcacgtacacagatgcaaca |
200 |
Q |
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| T |
43552017 |
attgtttaatttgaggtgtttaatatcatatgaatatacgagataacctacaacctatgaagcacgaacacatacgcaaca |
43551937 |
T |
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