View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6874A_low_213 (Length: 230)
Name: NF6874A_low_213
Description: NF6874A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6874A_low_213 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37701546 - 37701769
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37701546 |
aatgaggtggaagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
37701645 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37701646 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagccgcgggaatctcacccgtc |
37701745 |
T |
 |
| Q |
201 |
atttggttccttgagaggtccaac |
224 |
Q |
| |
|
| ||||||| |||||||||||| |
|
|
| T |
37701746 |
aaacggttcctggagaggtccaac |
37701769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 37394186 - 37393963
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||| |||||||||||||||||| |
|
|
| T |
37394186 |
aatgcggtggaagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtattcccttcataagaatcatttccaaatgtatcaaa |
37394087 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | |||||||||||| || |
|
|
| T |
37394086 |
ttgttgacctgtaggtatgactccctcaaggtggttttgtgaaaggtttaagaatgagaggaaattcaaatttgtcaaagccacgggaatctcacccttc |
37393987 |
T |
 |
| Q |
201 |
atttggttccttgagaggtccaac |
224 |
Q |
| |
|
| |||||||||||||||||||||| |
|
|
| T |
37393986 |
aattggttccttgagaggtccaac |
37393963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37531960 - 37532183
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||| ||| |
|
|
| T |
37531960 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaa |
37532059 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||||||| || |
|
|
| T |
37532060 |
ctgttgacctttaggtatgattccctcaaggtggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttc |
37532159 |
T |
 |
| Q |
201 |
atttggttccttgagaggtccaac |
224 |
Q |
| |
|
| |||||| | ||||||||||||| |
|
|
| T |
37532160 |
aattggttgcatgagaggtccaac |
37532183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37593064 - 37593287
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||| ||| |
|
|
| T |
37593064 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaa |
37593163 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||||||| || |
|
|
| T |
37593164 |
ctgttgacctttaggtatgattccctcaaggtggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttc |
37593263 |
T |
 |
| Q |
201 |
atttggttccttgagaggtccaac |
224 |
Q |
| |
|
| |||||| | ||||||||||||| |
|
|
| T |
37593264 |
aattggttgcatgagaggtccaac |
37593287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37638606 - 37638829
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||| ||| |
|
|
| T |
37638606 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaa |
37638705 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
|||||| ||| ||||||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||||||| || |
|
|
| T |
37638706 |
ctgttgacctttaggtatgattccctcaagatggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttc |
37638805 |
T |
 |
| Q |
201 |
atttggttccttgagaggtccaac |
224 |
Q |
| |
|
| |||||| | ||||||||||||| |
|
|
| T |
37638806 |
aattggttgcatgagaggtccaac |
37638829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37710367 - 37710590
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||||||||||| ||| |
|
|
| T |
37710367 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatggaaatccacacaacattgtatttccttcaaaagaatcatttccaaatgtattaaa |
37710466 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
|||||| ||| ||||||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||||||| || |
|
|
| T |
37710467 |
ctgttgacctttaggtatgattccctcaagatggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttc |
37710566 |
T |
 |
| Q |
201 |
atttggttccttgagaggtccaac |
224 |
Q |
| |
|
| |||||| | ||||||||||||| |
|
|
| T |
37710567 |
aattggttgcatgagaggtccaac |
37710590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 37402298 - 37402075
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||| ||||||||| ||| |
|
|
| T |
37402298 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaattggaatccacacaacattgtatttccttcaaaagaatcattttcaaatgtattaaa |
37402199 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
|||||| ||| ||||||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
37402198 |
ctgttgacctttaggtatgattccctcaagatggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtc |
37402099 |
T |
 |
| Q |
201 |
atttggttccttgagaggtccaac |
224 |
Q |
| |
|
| |||||| | ||||||||||||| |
|
|
| T |
37402098 |
aattggttgcatgagaggtccaac |
37402075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 37383613 - 37383407
Alignment:
| Q |
14 |
atcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgta |
113 |
Q |
| |
|
|||||| ||| ||||||||||||| |||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||| |||||||||| |||||| |
|
|
| T |
37383613 |
atcttcatcagttttgcatgattttgacaatggaaatccacataacattgtatttccttcaaaggaatcatttccaaatgtaccaaactgttgacctgta |
37383514 |
T |
 |
| Q |
114 |
ggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttggttccttg |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||| ||| ||||||||||| |
|
|
| T |
37383513 |
ggtatgattccctcaaggtggttttgtgaaagattcaagaaagagagaaaattcaaatttgtcaaagccaaaggaatctcacccttcaattggttccttg |
37383414 |
T |
 |
| Q |
214 |
agaggtc |
220 |
Q |
| |
|
||||||| |
|
|
| T |
37383413 |
agaggtc |
37383407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37822764 - 37822987
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||| |||||||||||||| ||| |
|
|
| T |
37822764 |
aatgaggtggccgatcttcctcatttttgcatgatttagacaatggaaatccacataacattgtatttccttcaaaagaatcatttccaaatgtattaaa |
37822863 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
|||||| ||| ||||||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||||||| || |
|
|
| T |
37822864 |
ctgttgacctttaggtatgattccctcaagatggttttgtgaaaggtttaagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttc |
37822963 |
T |
 |
| Q |
201 |
atttggttccttgagaggtccaac |
224 |
Q |
| |
|
| |||||| | ||||||||||||| |
|
|
| T |
37822964 |
aattggttgcatgagaggtccaac |
37822987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 37427922 - 37428138
Alignment:
| Q |
13 |
gatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttggcctgt |
112 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
37427922 |
gatcttcatcatttttgcatgatttagacaatatgaatccacataacattgtattcccttcataggaatcatttccaaatgtatcaaactgttggccggt |
37428021 |
T |
 |
| Q |
113 |
aggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc--att---tggt |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| | ||||||||||| ||| ||| |||| |
|
|
| T |
37428022 |
aggtatgattccctcaaggtggttttgtgagagattcaagaatgataggaaattcaaattttccaaagcggtgggaatctcacctgtcaaattaaatggt |
37428121 |
T |
 |
| Q |
208 |
tccttgagaggtccaac |
224 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
37428122 |
tccttgagaggtccaac |
37428138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 37434570 - 37434789
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
|||| ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| |||| |
|
|
| T |
37434570 |
aatgtggtggcagatctttctcgtttttgcatgatttagacaatgggaatccacataacattgtatttccttcataggaatcattttcaaatgtagcaaa |
37434669 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
||||| || |||||||||| ||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||| | |||||| ||||||||| |
|
|
| T |
37434670 |
ttgttgacccgtaggtatgactccctcaaggtggttgtttgaaaggttcaagaatgataggaaattcaaatttgtcaaagccacaggaatttcacccgtc |
37434769 |
T |
 |
| Q |
201 |
atttggttccttgagaggtc |
220 |
Q |
| |
|
| ||||| |||||||||| |
|
|
| T |
37434770 |
aactggttttttgagaggtc |
37434789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37695455 - 37695678
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
|||| ||||| |||||||| |||||||||||| || ||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||| |||| ||| |
|
|
| T |
37695455 |
aatgtggtggtagatcttcatcatttttgcataatctagacaatgggaatccacataacatagtattcccttcataggaatcatttccaaacgtattaaa |
37695554 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||||||||||||| || |||| ||||||||| ||||||||||||||||| | ||||||||| |||||| |
|
|
| T |
37695555 |
ctgttgacctttaggtatgattccctcaaggtggttttgtgaaagttttaagactgagaggaagttcaaatttgtcaaagccacaggaatctctcccgtc |
37695654 |
T |
 |
| Q |
201 |
atttggttccttgagaggtccaac |
224 |
Q |
| |
|
| |||||| | ||||||||||||| |
|
|
| T |
37695655 |
aattggttacatgagaggtccaac |
37695678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 37439935 - 37440150
Alignment:
| Q |
6 |
ggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgtt |
105 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
37439935 |
ggtggaagatcttcctcatttttgcatggcttagacaatggatatccacataacattgtattcccttcataggaatcatttccaaatgtaccaaactgtt |
37440034 |
T |
 |
| Q |
106 |
ggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttg |
205 |
Q |
| |
|
| |||| |||||||||||||||| |||||||||||||||| || |||| ||||||||||||||||||||||||| | ||||| ||||| |||| ||| |
|
|
| T |
37440035 |
gacctgcaggtatgattccctcatggtggttttgtgaaaggtttaagacagagaggaaattcaaatttgtcaaagtcacgggaatttcaccggtcaattg |
37440134 |
T |
 |
| Q |
206 |
gttccttgagaggtcc |
221 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
37440135 |
gtttcttgagaggtcc |
37440150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 16846962 - 16846740
Alignment:
| Q |
1 |
aatgaggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaa |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
|
|
| T |
16846962 |
aatgtggtggcagatcttcctcatttttt-atgatttagacgatgggaatccacacaacattgtatttccttcataggaatcatttccaaatgtagaaaa |
16846864 |
T |
 |
| Q |
101 |
ctgttggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtc |
200 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||| | ||||||||| |||||| |
|
|
| T |
16846863 |
ttgttgacctgtaggtatgactccctcaaggtggttttttgaaaggttcaagaaagaaaggaaattcaaatttgtcaaagccacaggaatctctcccgtc |
16846764 |
T |
 |
| Q |
201 |
atttggttccttgagaggtccaac |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
16846763 |
atttggttccttgagaggtccaac |
16846740 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 7 - 224
Target Start/End: Complemental strand, 16844290 - 16844073
Alignment:
| Q |
7 |
gtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgttg |
106 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||| |||||||| |||||||||||||| ||| ||||| |
|
|
| T |
16844290 |
gtggcagatcttcctcatttttgcatgaattagagaatggcaatccacacaacattgtattcccttgataggaatcatttccaaatgtattaaattgttg |
16844191 |
T |
 |
| Q |
107 |
gcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttgg |
206 |
Q |
| |
|
||||||||||||||||| | || ||||||||||||||| || ||||| || |||||||||||||||| |||||| | ||||||| ||||||| |||| |
|
|
| T |
16844190 |
acctgtaggtatgattcctttaaagtggttttgtgaaaggtttaagaaagaaaggaaattcaaatttgccaaagcctcaagaatctctcccgtcaattgg |
16844091 |
T |
 |
| Q |
207 |
ttccttgagaggtccaac |
224 |
Q |
| |
|
|| | ||||||||||||| |
|
|
| T |
16844090 |
ttgcatgagaggtccaac |
16844073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 6 - 224
Target Start/End: Complemental strand, 24219026 - 24218808
Alignment:
| Q |
6 |
ggtggcagatcttcctcatttttgcatgatttagacaatgggaatccacacaacattgtatttccttcataggaattatttccaaatgtatcaaactgtt |
105 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||| |||||||||||| | ||| |||| |
|
|
| T |
24219026 |
ggtggccgatcttcatcatttttgcatgattttgacaatggaaatccacataacattgcatttccttcataggaatcatttccaaatgtgttaaattgtt |
24218927 |
T |
 |
| Q |
106 |
ggcctgtaggtatgattccctcaaggtggttttgtgaaagattcaagaatgagaggaaattcaaatttgtcaaagcaataggaatctcacccgtcatttg |
205 |
Q |
| |
|
|||| |||||||||||||||| || |||||||||||||| || || || |||||||||||||||||||||||||| |||||||||| ||| ||| | |
|
|
| T |
24218926 |
ggccggtaggtatgattcccttgagatggttttgtgaaaggtttaaaaaagagaggaaattcaaatttgtcaaagccataggaatcttaccactcaagtt |
24218827 |
T |
 |
| Q |
206 |
gttccttgagaggtccaac |
224 |
Q |
| |
|
||| ||||||||||||||| |
|
|
| T |
24218826 |
gtttcttgagaggtccaac |
24218808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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