View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6874A_low_222 (Length: 230)
Name: NF6874A_low_222
Description: NF6874A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6874A_low_222 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 18260087 - 18260311
Alignment:
| Q |
7 |
tatggtgttagcatctggagttttagggatcaagataagagagtttgcattgtagttgggaaggagcgatccagtcttgaagaattctaccacagcttca |
106 |
Q |
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| T |
18260087 |
tatggtgtcagcatatggagttttagggatcaagataagagagtttgcattgtagttgggaaggagccatccagtcttgaagaattctaccacagcttca |
18260186 |
T |
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| Q |
107 |
tacacatctttctgaactatatcccaataggtttggaaaaagcaagcaccaaa-ccatgaggccctggtgcaccatcatgattcaaataaaaaatagcat |
205 |
Q |
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| T |
18260187 |
tacacatctttcttaactatattccaataggtttggaaaaagcaagcaccaaacccatgaggccctggtgcaccatcatgattcaaataaaaaatagcat |
18260286 |
T |
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| Q |
206 |
ttttaacttcacttggattaggaat |
230 |
Q |
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||||||||||||||||||||||||| |
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| T |
18260287 |
ttttaacttcacttggattaggaat |
18260311 |
T |
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