View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6874A_low_273 (Length: 210)
Name: NF6874A_low_273
Description: NF6874A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6874A_low_273 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 40389985 - 40390164
Alignment:
| Q |
16 |
acatcaaatgcagcaaatctggacctgctccatccacaccacagaatttctgttattaaagacaaaactagatcaacagatttatacttccccggaatct |
115 |
Q |
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| T |
40389985 |
acatcaaatgcagcaaatctggacctgctccatccacaccacagaatctctgttattaaagacaaaactagatcaacagatttatacttccccggaatct |
40390084 |
T |
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| Q |
116 |
aaattaaaccaaactaattacaactcacactcctatcttatcatccaccctttcctttatgatttgtttgtttgatattc |
195 |
Q |
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| T |
40390085 |
aaattaaaccaaactaattacaactcaaactcctatcttatcatccaccctttcctttatgatttgtttgtttgatattc |
40390164 |
T |
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