View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6874A_low_292 (Length: 203)
Name: NF6874A_low_292
Description: NF6874A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6874A_low_292 |
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Alignment Details
Target: chr4 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 3446088 - 3445973
Alignment:
| Q |
21 |
ggtaggtgggtgaacaaattatgttttgaagcatcaaattgatttgacatcatgggaaactatagatattctttgctggctagtcacagttttaatgtca |
120 |
Q |
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| T |
3446088 |
ggtaggtgggtgaacaaaatatgttttgaagcatcaaattgatttgacatcatgggaaactatagatattcttcgctggctagacacagttttaatgtca |
3445989 |
T |
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| Q |
121 |
taatcacaagtgatca |
136 |
Q |
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|||||||||||||||| |
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| T |
3445988 |
taatcacaagtgatca |
3445973 |
T |
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