View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6875A_low_130 (Length: 280)

Name: NF6875A_low_130
Description: NF6875A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6875A_low_130
NF6875A_low_130
[»] chr5 (13 HSPs)
chr5 (15-272)||(25542776-25543033)
chr5 (15-272)||(14192795-14193052)
chr5 (24-272)||(17871620-17871868)
chr5 (15-272)||(37372915-37373172)
chr5 (15-272)||(8428557-8428814)
chr5 (15-268)||(27881063-27881316)
chr5 (15-272)||(39883162-39883419)
chr5 (20-272)||(3689961-3690213)
chr5 (20-272)||(3876574-3876826)
chr5 (15-203)||(37261294-37261482)
chr5 (15-162)||(24629954-24630101)
chr5 (15-162)||(10025042-10025189)
chr5 (15-162)||(30346637-30346784)
[»] chr4 (8 HSPs)
chr4 (15-272)||(1860656-1860913)
chr4 (15-272)||(49710152-49710408)
chr4 (15-272)||(35855886-35856143)
chr4 (15-272)||(38518075-38518332)
chr4 (15-272)||(49786811-49787068)
chr4 (121-272)||(13337320-13337471)
chr4 (15-162)||(55559131-55559278)
chr4 (209-272)||(618207-618270)
[»] scaffold0017 (1 HSPs)
scaffold0017 (15-272)||(186534-186790)
[»] chr8 (6 HSPs)
chr8 (15-272)||(25218548-25218805)
chr8 (15-272)||(7821817-7822074)
chr8 (15-272)||(21113727-21113984)
chr8 (15-272)||(30307156-30307413)
chr8 (15-233)||(31978549-31978767)
chr8 (15-272)||(25209030-25209272)
[»] chr7 (9 HSPs)
chr7 (15-272)||(5828538-5828795)
chr7 (15-272)||(21070045-21070302)
chr7 (15-272)||(12785961-12786218)
chr7 (15-272)||(7036699-7036956)
chr7 (15-272)||(9001128-9001385)
chr7 (15-272)||(12781131-12781389)
chr7 (24-272)||(22843792-22844040)
chr7 (15-162)||(42232063-42232210)
chr7 (165-210)||(18939139-18939184)
[»] chr2 (11 HSPs)
chr2 (15-272)||(24269053-24269310)
chr2 (15-272)||(27192468-27192725)
chr2 (15-272)||(27842282-27842539)
chr2 (15-272)||(21395349-21395606)
chr2 (15-271)||(27509353-27509609)
chr2 (15-272)||(17683812-17684069)
chr2 (23-272)||(24245812-24246061)
chr2 (15-272)||(28666155-28666412)
chr2 (15-272)||(37824989-37825246)
chr2 (15-272)||(41920156-41920413)
chr2 (15-216)||(35609664-35609865)
[»] scaffold0134 (1 HSPs)
scaffold0134 (15-272)||(5243-5499)
[»] chr6 (8 HSPs)
chr6 (15-272)||(2202162-2202419)
chr6 (15-272)||(18344104-18344361)
chr6 (24-272)||(30881315-30881563)
chr6 (15-272)||(10187523-10187780)
chr6 (15-272)||(15333622-15333879)
chr6 (17-272)||(29640011-29640266)
chr6 (17-272)||(31510182-31510437)
chr6 (15-163)||(12517367-12517515)
[»] chr1 (11 HSPs)
chr1 (15-272)||(2453100-2453357)
chr1 (15-272)||(2329148-2329402)
chr1 (18-272)||(37390135-37390389)
chr1 (15-272)||(16042004-16042261)
chr1 (15-270)||(36207194-36207449)
chr1 (15-272)||(18148667-18148924)
chr1 (15-272)||(6310977-6311235)
chr1 (15-213)||(48238519-48238717)
chr1 (42-272)||(48775318-48775548)
chr1 (15-162)||(52500648-52500795)
chr1 (156-272)||(48233498-48233614)
[»] scaffold1139 (1 HSPs)
scaffold1139 (42-272)||(1006-1236)
[»] scaffold0262 (1 HSPs)
scaffold0262 (18-272)||(18988-19242)
[»] chr3 (13 HSPs)
chr3 (15-272)||(10110579-10110836)
chr3 (15-272)||(10000386-10000643)
chr3 (15-263)||(50410151-50410399)
chr3 (15-272)||(32750-33007)
chr3 (15-272)||(13530018-13530275)
chr3 (15-272)||(52918045-52918301)
chr3 (15-272)||(10968765-10969021)
chr3 (15-266)||(10237535-10237785)
chr3 (48-272)||(11368659-11368884)
chr3 (17-272)||(11362239-11362495)
chr3 (15-210)||(46913050-46913245)
chr3 (19-203)||(10038623-10038807)
chr3 (15-182)||(47692948-47693115)
[»] scaffold0090 (1 HSPs)
scaffold0090 (15-272)||(48919-49176)
[»] scaffold0073 (2 HSPs)
scaffold0073 (15-272)||(31912-32168)
scaffold0073 (15-241)||(19436-19662)
[»] scaffold0002 (1 HSPs)
scaffold0002 (15-272)||(321319-321576)
[»] scaffold0356 (1 HSPs)
scaffold0356 (15-272)||(17859-18109)
[»] scaffold0550 (1 HSPs)
scaffold0550 (15-272)||(555-812)
[»] scaffold0003 (2 HSPs)
scaffold0003 (42-272)||(182817-183047)
scaffold0003 (17-272)||(165511-165767)
[»] scaffold0025 (1 HSPs)
scaffold0025 (43-241)||(16691-16889)
[»] scaffold0118 (1 HSPs)
scaffold0118 (42-162)||(28727-28847)
[»] scaffold0888 (1 HSPs)
scaffold0888 (15-133)||(24-142)
[»] scaffold1424 (1 HSPs)
scaffold1424 (15-91)||(1627-1703)
[»] scaffold0107 (1 HSPs)
scaffold0107 (217-268)||(39937-39988)


Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 25543033 - 25542776
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| |||||||||  ||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25543033 tggacatcataattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 25542934  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25542933 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 25542834  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||  ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  25542833 catcaacatatttgttgtgtccgatatgagaaaatcttcaggaatttctaccttcatt 25542776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 14193052 - 14192795
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14193052 tggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 14192953  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  14192952 caactgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 14192853  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| |||||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  14192852 catcaacagatttgttgtgtccgatatgagcaaatcttcagaaatttctaccttcatt 14192795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 24 - 272
Target Start/End: Complemental strand, 17871868 - 17871620
Alignment:
Q  24 gaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaactgaat 123  Q
    ||||||||||  ||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  17871868 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 17871769  T
Q  124 caagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacgg 223  Q
    |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  17871768 caagcgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacgg 17871669  T
Q  224 atttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  17871668 atttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatt 17871620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 37372915 - 37373172
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||| ||||  |||||  ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||    
T  37372915 tggacatcagaattatcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcataaattggttaacatgct 37373014  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37373015 caactgaatcaagcgttggtgcgagtattcccctttcttcgaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 37373114  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||| |||  ||||| || |||||||||||||||||||||||||||    
T  37373115 catcaacggatttgttatgtctgatatcagcaaatcttcaggaatttctaccttcatt 37373172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 8428814 - 8428557
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||||||| |||||  |||||  ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  8428814 tggacatcagaatattcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 8428715  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||| |||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8428714 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 8428615  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||    
T  8428614 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatt 8428557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 15 - 268
Target Start/End: Original strand, 27881063 - 27881316
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| |||||||||  ||||| |||| |||||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||    
T  27881063 tggacatcataattttcacccgatctacaaatagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 27881162  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    || |||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27881163 cagctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 27881262  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctacctt 268  Q
    ||||||||||||||||| || |||||| || |||||||||||| ||||||||||    
T  27881263 catcaacggatttgttgggtccgatatcagcaaatcttcaggagtttctacctt 27881316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 39883162 - 39883419
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| |||| ||||  ||||| ||||||||||||||||||||||||||||||||||||| | ||||||  ||||||||| |||||||||||||||    
T  39883162 tggacatcataattgtcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcaacgacatcataaattcgttaacatgct 39883261  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||  || |||||||||||||||||| |||||||||||||||||||||||||||    
T  39883262 caactgaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagatcgggatacacaaagtctataagtga 39883361  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||| |||||| || ||||||| |||||| ||||||||||||    
T  39883362 catcaacggatttgttgtgtccgatatcagcaaatctttaggaatatctaccttcatt 39883419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 20 - 272
Target Start/End: Original strand, 3689961 - 3690213
Alignment:
Q  20 atcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaact 119  Q
    |||||||||||| |  ||||  ||||| ||||||||||||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||     
T  3689961 atcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaacc 3690060  T
Q  120 gaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatca 219  Q
    |||||||||||||||||||||||||   ||||||| ||||| || |||||||||| ||||||||||||||||||||| |||||||| || ||||||||||    
T  3690061 gaatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtcaccaatgttatcattcaaatcgggatatacaaagtccattagtgacatca 3690160  T
Q  220 acggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||| ||||||||| |  |||||||| |||||||  ||||||||||||||||||    
T  3690161 acgaatttgttgtatcggatatgagcaaatctttgggaatttctaccttcatt 3690213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 272
Target Start/End: Complemental strand, 3876826 - 3876574
Alignment:
Q  20 atcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaact 119  Q
    |||||||||||| |  ||||  ||||| ||||||||||||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||     
T  3876826 atcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaacc 3876727  T
Q  120 gaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatca 219  Q
    |||||||||||||||||||||||||   ||||||| ||||| || ||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||    
T  3876726 gaatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtccccaatgttatcattcaaatcgggatatacaaagtccattagtgacatca 3876627  T
Q  220 acggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||| ||||||||| |  |||||||| |||||||  ||||||||||||||||||    
T  3876626 acgaatttgttgtatcggatatgagcaaatctttgggaatttctaccttcatt 3876574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 37261294 - 37261482
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| |||||||||  ||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||| |||||    
T  37261294 tggacatcaaaattttcacccgatcgacaaacagaatcagagcttaaatactatttctcttcacctggaatcagtgacatcatatattcattaatatgct 37261393  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaag 203  Q
    ||||||||||||| ||||| || |||||||| |||||||| |||||||  ||||||  ||||||||||||||||| |||||||||||||    
T  37261394 caactgaatcaagtgttggcgcaagtattcccctttcttgaaaaaataacgggtcattaaggttatcattcaaattgggatacacaaag 37261482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 24630101 - 24629954
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  || |  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  24630101 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 24630002  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaata 162  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24630001 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 24629954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 10025042 - 10025189
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  || |  ||||||||||||||| ||||||||||||||||||||| | |||||| |||||||||||||||||||||||| |    
T  10025042 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacttggaatcaatgacatcatatattcgttaacatgtt 10025141  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaata 162  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10025142 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 10025189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 30346784 - 30346637
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  || |  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  30346784 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 30346685  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaata 162  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  30346684 caacttaatcaagtgttggtgcgagtattcccctttcttggaaaaata 30346637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 1860656 - 1860913
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  1860656 tggacatcagaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcacccagaatcagtgacatcatatattcgttaacatgct 1860755  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1860756 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 1860855  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| |||||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  1860856 catcaacagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatt 1860913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 49710152 - 49710408
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  49710152 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 49710251  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49710252 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 49710351  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||| ||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  49710352 catcaa-ggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatt 49710408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 35855886 - 35856143
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  |||||  ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  35855886 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 35855985  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35855986 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 35856085  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||    
T  35856086 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatt 35856143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 38518075 - 38518332
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  |||||  ||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  38518075 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 38518174  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  38518175 caattgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacaaagtctataagtga 38518274  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||    
T  38518275 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatt 38518332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 49787068 - 49786811
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||||||||||||| ||||||  ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||    
T  49787068 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaatatgct 49786969  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||| |||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  49786968 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 49786869  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||    
T  49786868 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatt 49786811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 121 - 272
Target Start/End: Original strand, 13337320 - 13337471
Alignment:
Q  121 aatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 220  Q
    |||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  13337320 aatcaagcgttgatgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgacataaa 13337419  T
Q  221 cggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  13337420 cggatttgttgtgtccgatatcagcaaatcttcatgaatttctaccttcatt 13337471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 55559278 - 55559131
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  || |  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  55559278 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 55559179  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaata 162  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  55559178 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 55559131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 618270 - 618207
Alignment:
Q  209 aagtgacatcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  618270 aagtgacatgaacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatt 618207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 186534 - 186790
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||||||||| |||  ||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  186534 tggacatcagaattt-cacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 186632  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    || |||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186633 cagctgaatcaagcgttggtgcgagtattcccctttattggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 186732  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  186733 catcaacagatttgttgtgtacgatatgagcaaatcttcaggaatttctaccttcatt 186790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 25218805 - 25218548
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  25218805 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 25218706  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25218705 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 25218606  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||    
T  25218605 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatt 25218548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 7821817 - 7822074
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  |||||  ||| ||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||||||    
T  7821817 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctgaaatcagcgacatcataaattcgttaacatgct 7821916  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  7821917 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcggaatacacaaagtctataagtga 7822016  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  7822017 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatt 7822074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 21113984 - 21113727
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  || |  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  21113984 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 21113885  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  21113884 caactgaatcaagcgttggtgcaagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtga 21113785  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| |||||||||||| |||||| || |||||||||||||||||||||||||||    
T  21113784 catcaacagatttgttgtgtccgatataagcaaatcttcaggaatttctaccttcatt 21113727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 30307156 - 30307413
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  |||||  ||| |||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  30307156 tggacatcagaattttcacccgatctaaaaatagaatcggagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 30307255  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||| |||| |||||||||||||||||||||||||||    
T  30307256 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcgttcagatcgggatacacaaagtctataagtga 30307355  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||| ||||||    
T  30307356 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctacattcatt 30307413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 233
Target Start/End: Complemental strand, 31978767 - 31978549
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||| |||||||| |  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||| |||||||    
T  31978767 tggacatctgaattttcccccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgct 31978668  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  31978667 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtga 31978568  T
Q  215 catcaacggatttgttgtg 233  Q
    ||||||| |||||||||||    
T  31978567 catcaacagatttgttgtg 31978549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 25209272 - 25209030
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||||||||||| |  |||||  ||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  25209272 tggacatcagaattttcgcccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 25209173  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||               |||||||||||||||    
T  25209172 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatt---------------aaagtctataagtga 25209088  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||  || || || |||||||||||||||||||||||||||    
T  25209087 catcaacggatttgttgtgtctgacatcagcaaatcttcaggaatttctaccttcatt 25209030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 5828795 - 5828538
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5828795 tggacatcataattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 5828696  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5828695 caactgagtcaagtgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 5828596  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||  |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  5828595 catcaaaagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatt 5828538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 21070302 - 21070045
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||  |||||||||  ||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  21070302 tggacatctaaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcaccaggaatcagtgacatcatatattcgttaacatgct 21070203  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  21070202 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcaggttaccaaggttatcattcagatcgggatacacaaagtctataagtga 21070103  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  21070102 catcaacggatttgttgtgtctgatatgagcaaatcttcaggaatttctaccttcatt 21070045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 12786218 - 12785961
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||||||||||||| ||||||  ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  12786218 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 12786119  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||| |||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  12786118 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 12786019  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  12786018 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatt 12785961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 7036699 - 7036956
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  |||||  ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  7036699 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 7036798  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7036799 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaagtagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 7036898  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||  ||||| ||  ||||||||||||||||||||||||||    
T  7036899 catcaacggatttgttgtgtctgatatcagcgaatcttcaggaatttctaccttcatt 7036956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 9001385 - 9001128
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  9001385 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 9001286  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||  ||||||||||||||||| ||| ||||||||| |||||||||||||| ||    
T  9001285 caactgaatcaagcgttagtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcaatcagatcgggataaacaaagtctataagaga 9001186  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||| |||||| |  ||||||||| |||||||||||||||||    
T  9001185 catcaacggatttgttgtgtccgatatcaacaaatcttcaagaatttctaccttcatt 9001128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 12781389 - 12781131
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaac-agaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgc 113  Q
    |||||||||||||||||||  |||||  |||  |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  12781389 tggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 12781290  T
Q  114 tcaactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtg 213  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12781289 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtg 12781190  T
Q  214 acatcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||||   |||| || |||||||||||||||||||||||||||    
T  12781189 acatcaacggatttgttgtgtcttatatcagcaaatcttcaggaatttctaccttcatt 12781131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 22843792 - 22844040
Alignment:
Q  24 gaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaactgaat 123  Q
    ||||||||||  ||||  ||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  22843792 gaattttcacccgatcgacaaacagaaacagaacttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 22843891  T
Q  124 caagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacgg 223  Q
    |||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| |    
T  22843892 caagcgttggtgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacag 22843991  T
Q  224 atttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||  |||||||| ||||||||| |||||||||||||||||    
T  22843992 atttgttgtgtcagatatgagcaaatcttcaagaatttctaccttcatt 22844040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 42232063 - 42232210
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  || |  |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  42232063 tggacatcagaattttcacccgagcgacaaacaaaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 42232162  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaata 162  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  42232163 caactgaatcaagcgttggtgagagtattcccctttcttggaaaaata 42232210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 18939139 - 18939184
Alignment:
Q  165 gggtcaccaaggttatcattcaaatcgggatacacaaagtctataa 210  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||    
T  18939139 gggttaccaaagttatcattcaaatcgggatacacaaagtttataa 18939184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 24269310 - 24269053
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  || |  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  24269310 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 24269211  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24269210 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 24269111  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  24269110 catcaacagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatt 24269053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 27192468 - 27192725
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| || ||||||  ||||  |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  27192468 tggacatcaaaaatttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgct 27192567  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27192568 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27192667  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| |||||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  27192668 catcaacagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatt 27192725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 27842282 - 27842539
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| || ||||||  ||||  |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  27842282 tggacatcaaaaatttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgct 27842381  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27842382 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27842481  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| |||||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  27842482 catcaacagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatt 27842539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 21395349 - 21395606
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  21395349 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 21395448  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||| ||    
T  21395449 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatatacaaagtctataagcga 21395548  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  21395549 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatt 21395606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 271
Target Start/End: Original strand, 27509353 - 27509609
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||| |||||||||||  ||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27509353 tggacattagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 27509452  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27509453 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27509552  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcat 271  Q
     ||||||| ||||||||||| ||| ||||| ||||||| ||||||||||||||||||    
T  27509553 tatcaacgaatttgttgtgtccgacatgagcaaatctttaggaatttctaccttcat 27509609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 17684069 - 17683812
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| |||||||||  ||||  |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17684069 tggacatcaaaattttcacccgatcgacaaacaaaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 17683970  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17683969 caattgaatcaagcgttggagcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 17683870  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||| | |||||||  ||| ||||||||||||||||||||||    
T  17683869 catcaacggatttgttgtgtccaatatgagcgaatattcaggaatttctaccttcatt 17683812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 23 - 272
Target Start/End: Original strand, 24245812 - 24246061
Alignment:
Q  23 agaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaactgaa 122  Q
    |||||||||||  ||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24245812 agaattttcacccgatcgacaaacagaatcagatcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 24245911  T
Q  123 tcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacg 222  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  24245912 tcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaggtctataagtgacatccacg 24246011  T
Q  223 gatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||| || |||||| ||||||| |||||||||||||||||||    
T  24246012 gatttgttgtgtccgttatgagcaaatctttaggaatttctaccttcatt 24246061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 28666412 - 28666155
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||||||||||||| ||||||  ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  28666412 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 28666313  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||| |||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  28666312 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 28666213  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  28666212 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatt 28666155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 37825246 - 37824989
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||||||||||||| ||||||  ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  37825246 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 37825147  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||| |||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  37825146 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacagagtctataagtga 37825047  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  37825046 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatt 37824989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 41920413 - 41920156
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  |||||  ||| |||||||||| ||||||||||||| ||||||||| ||||||  ||||||||| |||||||||||||||    
T  41920413 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttatcttcacctggaatcaacgacatcataaattcgttaacatgct 41920314  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
     || |||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41920313 taattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 41920214  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||    
T  41920213 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatt 41920156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 35609664 - 35609865
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  35609664 tggacatcagaattttcactcgatcgacaaacataatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatact 35609763  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  35609764 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaatgttatcattcaaatcggaatacacaaagtctataagtga 35609863  T
Q  215 ca 216  Q
    ||    
T  35609864 ca 35609865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 5499 - 5243
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  5499 tggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagtgacatcatatattcgttaacatgct 5400  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5399 caactgaatcaagcgttggtgcgagtattcccctttcttgg-aaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 5301  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||  |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  5300 catcaatagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatt 5243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 2202419 - 2202162
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  2202419 tggacatcagaattttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 2202320  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    | ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2202319 ctactgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 2202220  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||||    
T  2202219 catcaacggatttattgtgttcgatatgagcaaatcttcgggaatttctacattcatt 2202162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 18344104 - 18344361
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| |||||||||  ||||  |||| ||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||    
T  18344104 tggacatcaaaattttcacccgatcgacaaatagaatcaaagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgtcaacatgct 18344203  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18344204 caactgaatcaagcgttggtgcaagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 18344303  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  18344304 catgaacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatt 18344361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 30881315 - 30881563
Alignment:
Q  24 gaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaactgaat 123  Q
    ||||||||||  ||||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  30881315 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 30881414  T
Q  124 caagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacgg 223  Q
    |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  30881415 caagcgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacgg 30881514  T
Q  224 atttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  30881515 atttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatt 30881563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 10187523 - 10187780
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| |||||||||  ||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10187523 tggacatcaaaattttcacccgatcgacaaacagaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10187622  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||| ||||||||| ||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10187623 caattgaatcaagtgttggagcgagtattcccttttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 10187722  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||| |||||| | ||||||| |||| ||||||||||||||||||||||    
T  10187723 catcaacggattttttgtgtccaatatgagcaaatattcaggaatttctaccttcatt 10187780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 15333622 - 15333879
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  15333622 tggacatcagaattttcacctgatctacaaacagaatcagagcctaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 15333721  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||| |||||||||||||||||  ||| ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  15333722 caactgaatcaagtgttggtgcgagtattcccatttgttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctattagtga 15333821  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||  || |||||| |  |||||||||||||||||||||||||||    
T  15333822 catcaacggatttgttacgtacgatatcaacaaatcttcaggaatttctaccttcatt 15333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 17 - 272
Target Start/End: Complemental strand, 29640266 - 29640011
Alignment:
Q  17 gacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctca 116  Q
    |||||||||||||||||  |||||  ||| ||||| |||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  29640266 gacatcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctca 29640167  T
Q  117 actgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgaca 216  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  29640166 actgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcaggatacacaaagtctataagtgaca 29640067  T
Q  217 tcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||| ||||||||||| | ||||| || |||||||||||||||||||||||||||    
T  29640066 tcaacagatttgttgtggttgatatcagcaaatcttcaggaatttctaccttcatt 29640011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 17 - 272
Target Start/End: Complemental strand, 31510437 - 31510182
Alignment:
Q  17 gacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctca 116  Q
    |||||||||||||||||  |||||  ||| ||||| |||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  31510437 gacatcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctca 31510338  T
Q  117 actgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgaca 216  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  31510337 actgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagttggtcaccaaggttatcattcagattaggatacacaaagtctataagtgaca 31510238  T
Q  217 tcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||| ||||||||||| | ||||| || ||||||| || ||||||||||||||||    
T  31510237 tcaacagatttgttgtggttgatatcagcaaatcttaagaaatttctaccttcatt 31510182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 12517367 - 12517515
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  12517367 tggacatcagaattttcaccccatcatcaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 12517466  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatag 163  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||    
T  12517467 caactgaatcaagcgttggtgcaaatattcccctttcttggaaaaatag 12517515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 2453357 - 2453100
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  2453357 tggacatcagaattttcacccgatcgacaaatagaatcagagcctaaatactctttctcttcacctggaattagtgacatcatatattcgttaacatgct 2453258  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  2453257 caactcaataaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcggaattcacaaagtctataagtga 2453158  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2453157 catcaacggatttgttgtgttcgatatgagcaaatcttcaggaatttctaccttcatt 2453100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 2329148 - 2329402
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2329148 tggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 2329247  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    | ||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||   ||||||||||||    
T  2329248 cgactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtggatcaccaaggttatcattcaaatcgggatacac---gtctataagtga 2329344  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  2329345 catcaacggatttgttgtgtccgatatgagaaaatcttcaggaatttctaccttcatt 2329402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 37390389 - 37390135
Alignment:
Q  18 acatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaa 117  Q
    ||||||||||||||||  |||||  ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  37390389 acatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaa 37390290  T
Q  118 ctgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacat 217  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37390289 ctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacat 37390190  T
Q  218 caacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||  ||||| || |||||||||||||||||||||||||||    
T  37390189 caacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatt 37390135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 16042004 - 16042261
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||    
T  16042004 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 16042103  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||  || |||||||||||||||||| || ||||||||||||||||||||| ||    
T  16042104 caactgaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagattgggatacacaaagtctataagcga 16042203  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  16042204 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatt 16042261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 15 - 270
Target Start/End: Original strand, 36207194 - 36207449
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| |||||||||  ||||  |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36207194 tggacatcataattttcacccgatcgacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 36207293  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||  ||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36207294 caactgaatcaattgttggggcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 36207393  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttca 270  Q
    ||||||||||||||||||||  |||||||| ||||| |||||||||||||||||||    
T  36207394 catcaacggatttgttgtgtcggatatgagaaaatcatcaggaatttctaccttca 36207449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 18148667 - 18148924
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||| ||||||||||   ||||  |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18148667 tggacataagaattttcatccgatcgacaaacagaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 18148766  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  18148767 caaatgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaattgagatacacaaagtcgataagtga 18148866  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| |||||||||||| ||||||||| |||||||||  ||||||||||||||||    
T  18148867 catcaacagatttgttgtgtccgatatgagaaaatcttcataaatttctaccttcatt 18148924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 6311235 - 6310977
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaac-agaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgc 113  Q
    |||||||||||||||||||  |||||  |||  |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  6311235 tggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 6311136  T
Q  114 tcaactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtg 213  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6311135 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtg 6311036  T
Q  214 acatcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||||  ||||| ||  ||||||||||||||||||||||||||    
T  6311035 acatcaacggatttgttgtgtctgatatcagcgaatcttcaggaatttctaccttcatt 6310977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 48238717 - 48238519
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| | |||||||  ||||  ||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  48238717 tggacatcaaagttttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgttaacatgct 48238618  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48238617 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtg 48238519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 42 - 272
Target Start/End: Complemental strand, 48775548 - 48775318
Alignment:
Q  42 caaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagta 141  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48775548 caaactgaatcagagcttaaatactctttctcttcacctggaatcatttacatcatatattcgttaacatgctcaaccgaatcaagcgttggtgcgagta 48775449  T
Q  142 ttcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggatttgttgtgttcgatat 241  Q
    ||||  ||||||||||||| ||  ||||||||| |||||||||| |||||||||| ||||||| ||| ||||||||||| | |||||||||||  |||||    
T  48775448 ttcccttttcttggaaaaagagcaggtcaccaatgttatcattctaatcgggatatacaaagtgtattagtgacatcaaagaatttgttgtgtcggatat 48775349  T
Q  242 gagtaaatcttcaggaatttctaccttcatt 272  Q
    ||| |||||||| ||||||||||||||||||    
T  48775348 gagcaaatcttcgggaatttctaccttcatt 48775318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 52500648 - 52500795
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  || |  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  52500648 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 52500747  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaata 162  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  52500748 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 52500795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 156 - 272
Target Start/End: Original strand, 48233498 - 48233614
Alignment:
Q  156 aaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggatttgttgtgttcgatatgagtaaatcttcag 255  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  48233498 aaaaatagagggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcagcggatttgttgtgttcgatatgagtaaatcttcag 48233597  T
Q  256 gaatttctaccttcatt 272  Q
    |||||||||||||||||    
T  48233598 gaatttctaccttcatt 48233614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1139 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold1139
Description:

Target: scaffold1139; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 42 - 272
Target Start/End: Original strand, 1006 - 1236
Alignment:
Q  42 caaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagta 141  Q
    |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  1006 caaacaaaatcagagcttaaatactctttctcttcacttggaatcagtgacatcatatattcgttaacatgctcgactgaattaagcgttggtgcgagta 1105  T
Q  142 ttcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggatttgttgtgttcgatat 241  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1106 ttcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggatttgttgtgtccgatat 1205  T
Q  242 gagtaaatcttcaggaatttctaccttcatt 272  Q
    ||| |||||||||||||||||||||||||||    
T  1206 gagcaaatcttcaggaatttctaccttcatt 1236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 18988 - 19242
Alignment:
Q  18 acatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaa 117  Q
    ||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18988 acatcagaattttcactcgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaa 19087  T
Q  118 ctgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacat 217  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  19088 ctgaatcaagcgttggtgcgagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtgacat 19187  T
Q  218 caacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||  ||||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  19188 caacatatttgttgtgtccgatatgagcaaatcttcagaaatttctaccttcatt 19242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 10110579 - 10110836
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10110579 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10110678  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  10110679 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10110778  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| ||||||||| ||  |||||||| |||||||||||||||||||||||||||    
T  10110779 catcaacagatttgttgcgtctgatatgagcaaatcttcaggaatttctaccttcatt 10110836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 10000386 - 10000643
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10000386 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10000485  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  10000486 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10000585  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
     |||||| |||||||||  |  |||||||| |||||||||||||||||||||||||||    
T  10000586 tatcaacagatttgttgcatctgatatgagcaaatcttcaggaatttctaccttcatt 10000643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 263
Target Start/End: Original strand, 50410151 - 50410399
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  50410151 tggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatatttgttaacatgct 50410250  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    | ||||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50410251 cgactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtgggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtga 50410350  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttct 263  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  50410351 catcagcggatttgttgtgtccgatatgagaaaatcttcaggaatttct 50410399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 32750 - 33007
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  |||||  ||| |||||||||| ||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||    
T  32750 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 32849  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  32850 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtccataagtga 32949  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  32950 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatt 33007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 13530018 - 13530275
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||| || ||||||||| |||||  ||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||    
T  13530018 tggacaccaaaattttcacctgatcgacaagcagaaccagagcttaaatactctttctcttcacctggactcagtgacatcatatattcgttaaaatgct 13530117  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13530118 caactgaatgaagtgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 13530217  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||  |||||||  ||||||||  |||||||||||||||||    
T  13530218 catcaacggatttgttgtgtctgatatgaccaaatcttctagaatttctaccttcatt 13530275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 52918045 - 52918301
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52918045 tggacatcagaattttcacccgatcgacaaacaaaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 52918144  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||     
T  52918145 caactgaatcaagcgttggtgcgggtattcccctttcttggaaaaatagcgagtcaccaaggttatcattcaaatcgggatacacgaagtctataagtgg 52918244  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| |||||||||||| || ||   | ||||| |||||||||||||||||||||    
T  52918245 catcaacagatttgttgtgtccggtaacggcaaatc-tcaggaatttctaccttcatt 52918301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 10969021 - 10968765
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10969021 tggacatcagaattttcacccgatcgacaaacaaaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10968922  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
     |||||||||||||||||||||||||||||| ||| ||| |||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||     
T  10968921 aaactgaatcaagcgttggtgcgagtattccccttgcttagaaaaatagcaggtcacgaagtttatcattcaaatcgggatacacaaagtctataagtgg 10968822  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||| |||||| || ||||| |||| ||||||||||||||||    
T  10968821 catcaacggatttgttgtgtccgatatcagcaaatc-tcagaaatttctaccttcatt 10968765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 15 - 266
Target Start/End: Original strand, 10237535 - 10237785
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||  |||||| ||||| ||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  10237535 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaa-tactctttctcttcacctggaatcagtaacatcatatattcgttaacatgct 10237633  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  10237634 caactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10237733  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctacc 266  Q
    ||||||| ||||||||| ||  |||||||| || ||||||||||||||||||    
T  10237734 catcaacagatttgttgcgtctgatatgagcaattcttcaggaatttctacc 10237785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 48 - 272
Target Start/End: Original strand, 11368659 - 11368884
Alignment:
Q  48 gaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtattcctc 147  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||      
T  11368659 gaatcagagcttaaatactctttctcttcacctggaatcactgacatcatatattcgttaacatgctcaaccgaatcaagcgttggtgcgagtattccct 11368758  T
Q  148 tttcttgg-aaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggatttgttgtgttcgatatgagta 246  Q
    |||||||| ||||| || |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||| |    
T  11368759 tttcttggaaaaaagagcgggtcaccaatgttatcattcaaatcgggatatacaaagtctatgagtgacatcaacggatttgttgtgtcggatatgagca 11368858  T
Q  247 aatcttcaggaatttctaccttcatt 272  Q
    ||||||| ||||||||||| ||||||    
T  11368859 aatcttcgggaatttctacattcatt 11368884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 17 - 272
Target Start/End: Original strand, 11362239 - 11362495
Alignment:
Q  17 gacatcagaattttcacatgatcttcaaacagaatcagagcttaaatac-tctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctc 115  Q
    ||||||||| ||||| |  ||||  ||||| ||||||||||||||| |  ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  11362239 gacatcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctc 11362338  T
Q  116 aactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 215  Q
    ||| ||||||||||||||||||||||||||  |||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||| ||||||    
T  11362339 aaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgac 11362438  T
Q  216 atcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| ||||||||| |  ||||||||||||||||| ||||||||  ||||||||    
T  11362439 atcaacgaatttgttgtatcggatatgagtaaatcttcgggaatttcccccttcatt 11362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 46913050 - 46913245
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||||||||| | |  ||||  |||||| ||||| |||||||||||| ||| ||||||||| ||||  |||||||||||||||||||||||||||    
T  46913050 tggacatcagaatttccccccgatcgacaaacataatcaaagcttaaatactatttttcttcacctggaattggtgacatcatatattcgttaacatgct 46913149  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataa 210  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  46913150 caactgaatcaagcgttggtgcgagtattctcctttcttggaaaaatagcgggtcgccaaagttatcattcaaatcgggatacacaaagtctataa 46913245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 203
Target Start/End: Original strand, 10038623 - 10038807
Alignment:
Q  19 catcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaac 118  Q
    |||||||||||||||  ||||  |||||||||| |||||||||||| | ||||||||||||| |||||||||||||||||||||| |||| ||||||||     
T  10038623 catcagaattttcacccgatcgacaaacagaatgagagcttaaataatatttctcttcacctggaatcagtgacatcatatattcattaatatgctcaat 10038722  T
Q  119 tgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaag 203  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  10038723 tgaatcaagtgttggcgcgagtattcccctttcttggaaaaatagcgggtcactaaggttatcattcaaattgggatacacaaag 10038807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 47692948 - 47693115
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||    ||||  ||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||    
T  47692948 tggacatcagaattttcgtccgatcgacaaacagaatcagaggttaaatactctttctcttcacctggaattagtgacatcatgtattcgttaacatgct 47693047  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatca 182  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||| | ||||||||||||||||||    
T  47693048 caactgaatcaagcgttggtgcgaggattcccctttcttgggaaaattgtgggtcaccaaggttatca 47693115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 49176 - 48919
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||||||||||||| ||||||  ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  49176 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 49077  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||| |||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  49076 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 48977  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  48976 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatt 48919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 186; Significance: 1e-101; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 31912 - 32168
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||| |||||||  |||||||| |||||||||||||||    
T  31912 tggacatcagaattttcacccgatctacaaacagaatcagagtttaaatactctttctcttcacctggaatcagcaacatcataaattcgttaacatgct 32011  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32012 caactgaatcaagcgttggtgcaagtatccc-ctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 32110  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  32111 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatt 32168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 15 - 241
Target Start/End: Original strand, 19436 - 19662
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||| |||||||    
T  19436 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgct 19535  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  19536 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtga 19635  T
Q  215 catcaacggatttgttgtgttcgatat 241  Q
    ||||||| |||||||||||| ||||||    
T  19636 catcaacagatttgttgtgtccgatat 19662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 321576 - 321319
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||  |||||| || |||||| |||||||||||||||    
T  321576 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagcgatatcataaattcgttaacatgct 321477  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  321476 caactgaatcaagcattggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacaaaaagtctataagtga 321377  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||| ||| |||||| || |||||||||||||||||||||||||||    
T  321376 catcaacggatttgttttgtccgatatcagcaaatcttcaggaatttctaccttcatt 321319  T

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Target: scaffold0356 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 18109 - 17859
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    ||||||||| |||||||||  ||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18109 tggacatcataattttcacccgatcggcaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 18010  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||| ||||||||||||||||||||||||| ||||||||       || || |||||||||||||||||||||||||||||||||||||||||||||||    
T  18009 caactaaatcaagcgttggtgcgagtattcccctttcttg-------agcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 17917  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||    
T  17916 catcaacggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatt 17859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 812 - 555
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||||||||||||||||||   |||| ||||||||||||||| ||||||||||||||| ||||||| ||||||| ||||||||| |||| ||||||||||    
T  812 tggacatcagaattttcacccaatctacaaacagaatcagaggttaaatactctttcttttcacctggaatcagcgacatcataaattcattaacatgct 713  T
Q  115 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 214  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  712 caactgaatcaagcgttggtgcgagtattcccctttattggaaaaatagctggtcaccaaggttatcatttagatcgggatacacaaagtttataagtga 613  T
Q  215 catcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||||| ||||||||||  ||||| || |||||||||||||||||||||||||||    
T  612 catcaacgggtttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatt 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 42 - 272
Target Start/End: Original strand, 182817 - 183047
Alignment:
Q  42 caaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagta 141  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  182817 caaactgaatcagagcttaaatactctttctcttcacttggaatcactgacatcatatattcgttaacatgctcaaccgaatcaagcgttggtgcgagta 182916  T
Q  142 ttcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggatttgttgtgttcgatat 241  Q
    ||||  ||||||||||||| || |||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| |  |||||    
T  182917 ttcccttttcttggaaaaagagtgggtcaccaatgatatcattcaaatcgggatatacaaagtctattagtgacatcaacgaatttgttgtatcggatat 183016  T
Q  242 gagtaaatcttcaggaatttctaccttcatt 272  Q
    ||| |||||||| ||||||||||||||||||    
T  183017 gagcaaatcttcgggaatttctaccttcatt 183047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 17 - 272
Target Start/End: Original strand, 165511 - 165767
Alignment:
Q  17 gacatcagaattttcacatgatcttcaaacagaatcagagcttaaatac-tctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctc 115  Q
    ||||||||| ||||| |  ||||  ||||| ||||||||||||||| |  ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  165511 gacatcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctc 165610  T
Q  116 aactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 215  Q
    ||| ||||||||||||||||||||||||||  |||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||| ||||||    
T  165611 aaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgac 165710  T
Q  216 atcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctaccttcatt 272  Q
    ||||||| ||||||||| |  ||||||||||||||||| ||||||||  ||||||||    
T  165711 atcaacgaatttgttgtatcggatatgagtaaatcttcgggaatttcccccttcatt 165767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 43 - 241
Target Start/End: Original strand, 16691 - 16889
Alignment:
Q  43 aaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagtat 142  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||| ||| ||| ||| ||||||||||||||||||    
T  16691 aaacagaatcatagcttaaaaactctttctcttcacctagaatcagtgaaatcatatatgcgttaacatactccactaaattaagcgttggtgcgagtat 16790  T
Q  143 tcctctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggatttgttgtgttcgatat 241  Q
    ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16791 tcccctttcttggaaaaatagcgggtcaccaaagttatcattcaaatcgggatacacaaagtctataagtgacatcaacggatttgttgtgtccgatat 16889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 28847 - 28727
Alignment:
Q  42 caaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgctcaactgaatcaagcgttggtgcgagta 141  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28847 caaacagaatcagagtttaaatactttttctcttcacctggaatcagtgacatcatatattcgttaacatgttcaactgaatcaagcgttggtgcgagta 28748  T
Q  142 ttcctctttcttggaaaaata 162  Q
    |||| ||||||||||||||||    
T  28747 ttcccctttcttggaaaaata 28727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 142 - 24
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtgacatcatatattcgttaacatgct 114  Q
    |||| ||||||||||||||  ||||  || ||| |||||||||||||||||||||||||  |||||  ||||||||||||| ||||||||||||||||||    
T  142 tggaaatcagaattttcacccgatcgacatacaaaatcagagcttaaatactctttctcgccacctgaaatcagtgacatcgtatattcgttaacatgct 43  T
Q  115 caactgaatcaagcgttgg 133  Q
    |||||||||||||| ||||    
T  42 caactgaatcaagccttgg 24  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1424 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1424
Description:

Target: scaffold1424; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 1627 - 1703
Alignment:
Q  15 tggacatcagaattttcacatgatcttcaaacagaatcagagcttaaatactctttctcttcaccttgaatcagtga 91  Q
    ||||||||| |||||||||  ||||   ||||| |||||||| |||||||| |||||||||||||| ||||||||||    
T  1627 tggacatcaaaattttcacccgatcgataaacataatcagagtttaaatacgctttctcttcacctggaatcagtga 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 39937 - 39988
Alignment:
Q  217 tcaacggatttgttgtgttcgatatgagtaaatcttcaggaatttctacctt 268  Q
    |||||||||||||||||| |||||| || ||||||||| |||||||||||||    
T  39937 tcaacggatttgttgtgtccgatatcagcaaatcttcaagaatttctacctt 39988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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