View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6875A_low_144 (Length: 272)

Name: NF6875A_low_144
Description: NF6875A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6875A_low_144
NF6875A_low_144
[»] chr5 (11 HSPs)
chr5 (20-214)||(22042553-22042746)
chr5 (214-265)||(29186292-29186343)
chr5 (213-265)||(20398649-20398701)
chr5 (214-265)||(20372927-20372978)
chr5 (214-265)||(24956860-24956911)
chr5 (214-265)||(24965323-24965374)
chr5 (214-247)||(19223555-19223588)
chr5 (213-265)||(28843939-28843991)
chr5 (213-265)||(43598060-43598112)
chr5 (213-265)||(43603552-43603604)
chr5 (213-265)||(43609044-43609096)
[»] chr2 (12 HSPs)
chr2 (212-265)||(20372327-20372380)
chr2 (214-265)||(14582925-14582976)
chr2 (214-265)||(15944571-15944622)
chr2 (214-265)||(15953086-15953137)
chr2 (214-265)||(20621518-20621569)
chr2 (214-265)||(35138593-35138644)
chr2 (214-265)||(35146929-35146980)
chr2 (214-265)||(41233858-41233909)
chr2 (214-264)||(17687413-17687463)
chr2 (214-247)||(25483601-25483634)
chr2 (214-247)||(25491207-25491240)
chr2 (214-247)||(42249487-42249520)
[»] chr8 (9 HSPs)
chr8 (214-265)||(17664654-17664705)
chr8 (214-265)||(17683810-17683861)
chr8 (212-265)||(4839796-4839849)
chr8 (214-265)||(17973565-17973616)
chr8 (214-265)||(26873618-26873669)
chr8 (214-265)||(26876068-26876119)
chr8 (214-265)||(30938282-30938333)
chr8 (214-247)||(4582204-4582237)
chr8 (213-265)||(39845619-39845671)
[»] chr7 (6 HSPs)
chr7 (214-265)||(10439937-10439988)
chr7 (214-247)||(30244775-30244808)
chr7 (214-265)||(4941591-4941642)
chr7 (214-265)||(4952411-4952462)
chr7 (214-265)||(12978455-12978506)
chr7 (214-265)||(18304406-18304457)
[»] chr6 (10 HSPs)
chr6 (214-265)||(15391625-15391676)
chr6 (213-265)||(5004060-5004112)
chr6 (213-265)||(5489133-5489185)
chr6 (214-265)||(5994699-5994750)
chr6 (214-265)||(23925335-23925386)
chr6 (213-264)||(25550294-25550345)
chr6 (214-265)||(33298085-33298136)
chr6 (213-264)||(35091691-35091742)
chr6 (214-247)||(13490193-13490226)
chr6 (214-247)||(30824561-30824594)
[»] chr3 (10 HSPs)
chr3 (213-251)||(28470245-28470283)
chr3 (213-265)||(50824351-50824403)
chr3 (213-265)||(50851457-50851509)
chr3 (214-265)||(2211239-2211290)
chr3 (214-265)||(17628265-17628316)
chr3 (214-247)||(30508-30541)
chr3 (214-247)||(8197728-8197761)
chr3 (214-247)||(14538637-14538670)
chr3 (214-247)||(17919199-17919232)
chr3 (214-247)||(27341367-27341400)
[»] chr4 (8 HSPs)
chr4 (214-251)||(21532332-21532369)
chr4 (214-265)||(12996476-12996527)
chr4 (214-265)||(52295604-52295655)
chr4 (214-247)||(8094314-8094347)
chr4 (214-247)||(8103120-8103153)
chr4 (214-247)||(10638328-10638361)
chr4 (214-247)||(12428510-12428543)
chr4 (214-247)||(27343723-27343756)
[»] scaffold0497 (1 HSPs)
scaffold0497 (214-265)||(10993-11044)
[»] scaffold0156 (1 HSPs)
scaffold0156 (214-265)||(35370-35421)
[»] scaffold0016 (1 HSPs)
scaffold0016 (214-265)||(23464-23515)
[»] scaffold0002 (1 HSPs)
scaffold0002 (214-265)||(121228-121279)
[»] chr1 (4 HSPs)
chr1 (214-265)||(31539954-31540005)
chr1 (214-265)||(31548523-31548574)
chr1 (214-265)||(35104078-35104129)
chr1 (214-247)||(21498930-21498963)
[»] scaffold0048 (1 HSPs)
scaffold0048 (213-247)||(7661-7695)
[»] scaffold0991 (1 HSPs)
scaffold0991 (214-247)||(405-438)
[»] scaffold0431 (1 HSPs)
scaffold0431 (214-247)||(139-172)
[»] scaffold0111 (1 HSPs)
scaffold0111 (214-247)||(33035-33068)
[»] scaffold0083 (1 HSPs)
scaffold0083 (214-247)||(15813-15846)
[»] scaffold0039 (1 HSPs)
scaffold0039 (214-247)||(40865-40898)
[»] scaffold0015 (1 HSPs)
scaffold0015 (214-247)||(192528-192561)


Alignment Details
Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 22042553 - 22042746
Alignment:
Q  20 tgtgcacattgaagaagtataacaacactgcagagtagtaaaacaaaataaaattagcagttaggaaaactgaaaatatagaatacctgatatggaagat 119  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| |    |  ||||||||||||| |||||||||||||||||||||||||||||||    
T  22042553 tgtgcacattgaagaagtataacaacagtgcagagtagtataacaacagtgcag-agcagttaggaaagctgaaaatatagaatacctgatatggaagat 22042651  T
Q  120 gtacagtttcaaaacctcccagaacttgtcttttaagcacatcacgatatccagccatttcaagtggaaagagtagttaaagatgatgtagttat 214  Q
    ||||||||||||||||||| |||| |||||||||||| ||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  22042652 gtacagtttcaaaacctcctagaatttgtcttttaagtacaacacgatatccagccatttgaagtggaaagagttgttaaagatgatgtagttat 22042746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 29186343 - 29186292
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||||||| || || |||||||    
T  29186343 tgtcataccccaaattttgaccacttttctctatccttacccattttattcg 29186292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 20398701 - 20398649
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  20398701 atgtcataccccaaattttgaccacttttctctattcttaccgattttattcg 20398649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 20372978 - 20372927
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  20372978 tgtcataccccaaattttgaccacttttctctattcttaccgattttattcg 20372927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 24956911 - 24956860
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  24956911 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 24956860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 24965374 - 24965323
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  24965374 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 24965323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 19223555 - 19223588
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  19223555 tgtcataccccaaattttgaccacttttctctat 19223588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 28843939 - 28843991
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||| ||||||||||||||||| |||||| ||| || || |||||||    
T  28843939 atgtcataccccaaattttgaccactttcctctattcttacccattttattcg 28843991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 43598112 - 43598060
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||| ||||||||||||||||| |||||| ||| || || |||||||    
T  43598112 atgtcataccccaaattttgaccactttcctctattcttacccattttattcg 43598060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 43603604 - 43603552
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||| ||||||||||||||||| |||||| ||| || || |||||||    
T  43603604 atgtcataccccaaattttgaccactttcctctattcttacccattttattcg 43603552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 43609096 - 43609044
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||| ||||||||||||||||| |||||| ||| || || |||||||    
T  43609096 atgtcataccccaaattttgaccactttcctctattcttacccattttattcg 43609044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 20372380 - 20372327
Alignment:
Q  212 tatgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||||| ||||||||||||||||||||||||||||||| || |||||||    
T  20372380 tatgtcataccccaaattttgaccacttttctctatccttgcccattttattcg 20372327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 14582925 - 14582976
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  14582925 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 14582976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 15944622 - 15944571
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  15944622 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 15944571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 15953137 - 15953086
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  15953137 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 15953086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 20621518 - 20621569
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  20621518 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 20621569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 35138593 - 35138644
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  35138593 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 35138644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 35146929 - 35146980
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  35146929 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 35146980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 41233909 - 41233858
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  41233909 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 41233858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 17687463 - 17687413
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattc 264  Q
    ||||||||| |||||||||||||||||||||||| ||| || || ||||||    
T  17687463 tgtcataccccaaattttgaccacttttctctattcttacccattttattc 17687413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 25483601 - 25483634
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  25483601 tgtcataccccaaattttgaccacttttctctat 25483634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 25491207 - 25491240
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  25491207 tgtcataccccaaattttgaccacttttctctat 25491240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 42249520 - 42249487
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  42249520 tgtcataccccaaattttgaccacttttctctat 42249487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 17664705 - 17664654
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| ||||||||||||||||||||||||||||||| || |||||||    
T  17664705 tgtcataccccaaattttgaccacttttctctatccttgcccattttattcg 17664654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 17683861 - 17683810
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| ||||||||||||||||||||||||||||||| || |||||||    
T  17683861 tgtcataccccaaattttgaccacttttctctatccttgcccattttattcg 17683810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 4839849 - 4839796
Alignment:
Q  212 tatgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||||| |||||||||||| ||||||||||| ||| ||||| |||||||    
T  4839849 tatgtcataccccaaattttgaccgcttttctctattcttacctattttattcg 4839796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 17973565 - 17973616
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  17973565 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 17973616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 26873669 - 26873618
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  26873669 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 26873618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 26876119 - 26876068
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  26876119 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 26876068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 30938282 - 30938333
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  30938282 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 30938333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 4582204 - 4582237
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    |||||||||| |||||||||||||||||||||||    
T  4582204 tgtcataccttaaattttgaccacttttctctat 4582237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 39845671 - 39845619
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||| ||||||||||||||||| |||||| ||| || || |||||||    
T  39845671 atgtcataccccaaattttgaccactttcctctattcttacccattttattcg 39845619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 10439937 - 10439988
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| |||||| || |||||||    
T  10439937 tgtcataccccaaattttgaccacttttctctattcttgcccattttattcg 10439988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 30244775 - 30244808
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||||||||||||||||||||||||||||    
T  30244775 tgtcatacctcaaattttgaccacttttctctat 30244808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 4941642 - 4941591
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  4941642 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 4941591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 4952462 - 4952411
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||||||||||||||||||||| ||||| ||| || || |||||||    
T  4952462 tgtcatacctcaaattttgaccacttttatctattcttacccattttattcg 4952411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 12978455 - 12978506
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  12978455 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 12978506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 18304457 - 18304406
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  18304457 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 18304406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 15391676 - 15391625
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||| | ||||||||||||||||||||||||||||||| || |||||||    
T  15391676 tgtcatatcccaaattttgaccacttttctctatccttgcccattttattcg 15391625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 5004060 - 5004112
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  5004060 atgtcataccccaaattttgaccacttttctctattcttacccattttattcg 5004112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 5489185 - 5489133
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  5489185 atgtcataccccaaattttgaccacttttctctattcttacccattttattcg 5489133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 5994699 - 5994750
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  5994699 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 5994750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 23925335 - 23925386
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  23925335 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 23925386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 25550294 - 25550345
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattc 264  Q
    |||||||||| |||||||||||||||||||||||| ||| || || ||||||    
T  25550294 atgtcataccccaaattttgaccacttttctctattcttacccattttattc 25550345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 33298085 - 33298136
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| ||| |||||||||||||||||||||||| || || |||||||    
T  33298085 tgtcataccccaacttttgaccacttttctctatccttacccattttattcg 33298136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 35091742 - 35091691
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattc 264  Q
    |||||||||| |||||||||||||||||||||||| ||| || || ||||||    
T  35091742 atgtcataccccaaattttgaccacttttctctattcttacccattttattc 35091691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 13490193 - 13490226
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  13490193 tgtcataccccaaattttgaccacttttctctat 13490226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 30824594 - 30824561
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  30824594 tgtcataccccaaattttgaccacttttctctat 30824561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 28470283 - 28470245
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatcctt 251  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  28470283 atgtcataccccaaattttgaccacttttctctatcctt 28470245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 50824351 - 50824403
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  50824351 atgtcataccccaaattttgaccacttttctctattcttacccattttattcg 50824403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 50851509 - 50851457
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  50851509 atgtcataccccaaattttgaccacttttctctattcttacccattttattcg 50851457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 2211239 - 2211290
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    |||||||||  ||||||||||||||||||||||| ||| ||||| |||||||    
T  2211239 tgtcataccctaaattttgaccacttttctctattcttacctattttattcg 2211290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 17628265 - 17628316
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  17628265 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 17628316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 30541 - 30508
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  30541 tgtcataccccaaattttgaccacttttctctat 30508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 8197761 - 8197728
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  8197761 tgtcataccccaaattttgaccacttttctctat 8197728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 14538670 - 14538637
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  14538670 tgtcataccccaaattttgaccacttttctctat 14538637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 17919199 - 17919232
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  17919199 tgtcataccccaaattttgaccacttttctctat 17919232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 27341400 - 27341367
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  27341400 tgtcataccccaaattttgaccacttttctctat 27341367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 21532369 - 21532332
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatcctt 251  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  21532369 tgtcataccccaaattttgaccacttttctctatcctt 21532332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 12996476 - 12996527
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  12996476 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 12996527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 52295604 - 52295655
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  52295604 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 52295655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 8094347 - 8094314
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  8094347 tgtcataccccaaattttgaccacttttctctat 8094314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 8103153 - 8103120
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  8103153 tgtcataccccaaattttgaccacttttctctat 8103120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 10638328 - 10638361
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  10638328 tgtcataccccaaattttgaccacttttctctat 10638361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 12428543 - 12428510
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  12428543 tgtcataccccaaattttgaccacttttctctat 12428510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 27343756 - 27343723
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  27343756 tgtcataccccaaattttgaccacttttctctat 27343723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 10993 - 11044
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  10993 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 11044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 35421 - 35370
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  35421 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 35370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 23464 - 23515
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  23464 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 23515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 121228 - 121279
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  121228 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 121279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000006; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 31539954 - 31540005
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  31539954 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 31540005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 31548523 - 31548574
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  31548523 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 31548574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 35104129 - 35104078
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctatccttgcctatattattcg 265  Q
    ||||||||| |||||||||||||||||||||||| ||| || || |||||||    
T  35104129 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 35104078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 21498963 - 21498930
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  21498963 tgtcataccccaaattttgaccacttttctctat 21498930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 7695 - 7661
Alignment:
Q  213 atgtcatacctcaaattttgaccacttttctctat 247  Q
    |||||||||| ||||||||||||||||||||||||    
T  7695 atgtcataccccaaattttgaccacttttctctat 7661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 438 - 405
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  438 tgtcataccccaaattttgaccacttttctctat 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 139 - 172
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  139 tgtcataccccaaattttgaccacttttctctat 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 33035 - 33068
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  33035 tgtcataccccaaattttgaccacttttctctat 33068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 15813 - 15846
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  15813 tgtcataccccaaattttgaccacttttctctat 15846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 40898 - 40865
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  40898 tgtcataccccaaattttgaccacttttctctat 40865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 192528 - 192561
Alignment:
Q  214 tgtcatacctcaaattttgaccacttttctctat 247  Q
    ||||||||| ||||||||||||||||||||||||    
T  192528 tgtcataccccaaattttgaccacttttctctat 192561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University