View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6875A_low_175 (Length: 253)

Name: NF6875A_low_175
Description: NF6875A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6875A_low_175
NF6875A_low_175
[»] chr2 (38 HSPs)
chr2 (16-253)||(15890594-15890831)
chr2 (91-161)||(36449707-36449777)
chr2 (127-171)||(7939993-7940037)
chr2 (127-177)||(1366406-1366456)
chr2 (127-168)||(40947462-40947503)
chr2 (130-171)||(41078158-41078199)
chr2 (91-166)||(22298255-22298330)
chr2 (127-177)||(33476550-33476600)
chr2 (127-177)||(37199593-37199643)
chr2 (127-168)||(26196237-26196278)
chr2 (127-171)||(10357120-10357164)
chr2 (127-171)||(11051589-11051633)
chr2 (127-171)||(44332382-44332426)
chr2 (127-170)||(3044958-3045001)
chr2 (127-210)||(7939357-7939440)
chr2 (127-166)||(13873990-13874029)
chr2 (127-166)||(14014115-14014154)
chr2 (116-171)||(35175642-35175696)
chr2 (127-177)||(6229878-6229928)
chr2 (127-177)||(31597255-31597305)
chr2 (127-177)||(33146065-33146115)
chr2 (127-177)||(34173707-34173757)
chr2 (127-177)||(37009653-37009703)
chr2 (127-165)||(38910705-38910743)
chr2 (85-171)||(40768822-40768908)
chr2 (134-171)||(41521667-41521704)
chr2 (127-171)||(3515472-3515516)
chr2 (127-163)||(5475141-5475177)
chr2 (127-167)||(8313686-8313726)
chr2 (127-171)||(11796170-11796214)
chr2 (147-175)||(17449771-17449799)
chr2 (127-171)||(17829081-17829125)
chr2 (127-171)||(20894280-20894324)
chr2 (127-171)||(34173076-34173120)
chr2 (121-165)||(34579649-34579693)
chr2 (121-165)||(34585398-34585442)
chr2 (127-171)||(35899168-35899212)
chr2 (94-166)||(42706890-42706962)
[»] scaffold0068 (1 HSPs)
scaffold0068 (91-177)||(59255-59341)
[»] chr8 (38 HSPs)
chr8 (91-177)||(8438561-8438647)
chr8 (122-177)||(37266136-37266191)
chr8 (92-177)||(33452317-33452403)
chr8 (92-177)||(3075960-3076045)
chr8 (90-171)||(11140090-11140171)
chr8 (127-171)||(8437930-8437974)
chr8 (127-171)||(11141061-11141105)
chr8 (127-171)||(13422066-13422110)
chr8 (127-171)||(32905327-32905371)
chr8 (127-167)||(37304896-37304936)
chr8 (127-171)||(41311703-41311747)
chr8 (127-166)||(11760072-11760111)
chr8 (91-170)||(31846444-31846523)
chr8 (127-177)||(5551586-5551636)
chr8 (127-177)||(14094144-14094194)
chr8 (127-177)||(17564701-17564751)
chr8 (127-165)||(24778021-24778059)
chr8 (139-177)||(30354521-30354559)
chr8 (127-177)||(37836952-37837002)
chr8 (127-177)||(40791079-40791129)
chr8 (91-165)||(44284356-44284430)
chr8 (127-168)||(3075339-3075380)
chr8 (127-172)||(6099475-6099520)
chr8 (138-171)||(34923885-34923918)
chr8 (127-168)||(36016762-36016803)
chr8 (127-171)||(13421474-13421518)
chr8 (91-171)||(14093478-14093558)
chr8 (127-171)||(14363808-14363852)
chr8 (127-163)||(14879553-14879589)
chr8 (127-171)||(14880188-14880232)
chr8 (127-171)||(22934322-22934366)
chr8 (113-165)||(30991373-30991425)
chr8 (127-171)||(31739542-31739586)
chr8 (127-171)||(32904219-32904263)
chr8 (127-163)||(37872303-37872339)
chr8 (127-171)||(39998403-39998447)
chr8 (127-171)||(40791755-40791799)
chr8 (127-171)||(41312380-41312424)
[»] chr6 (27 HSPs)
chr6 (91-177)||(21802598-21802684)
chr6 (90-177)||(12767600-12767687)
chr6 (127-173)||(31881871-31881917)
chr6 (127-171)||(4125907-4125951)
chr6 (127-177)||(2522699-2522749)
chr6 (127-171)||(4100545-4100589)
chr6 (127-171)||(12026197-12026241)
chr6 (111-171)||(21847369-21847429)
chr6 (127-171)||(22022274-22022318)
chr6 (127-171)||(25527760-25527804)
chr6 (127-166)||(6936405-6936444)
chr6 (127-173)||(188431-188477)
chr6 (140-177)||(15499490-15499527)
chr6 (127-171)||(7127657-7127701)
chr6 (127-163)||(7448259-7448295)
chr6 (127-171)||(10702301-10702345)
chr6 (127-171)||(11522830-11522874)
chr6 (127-171)||(12033117-12033161)
chr6 (91-171)||(12409407-12409487)
chr6 (113-165)||(12767055-12767107)
chr6 (127-171)||(14313849-14313893)
chr6 (127-171)||(16326070-16326114)
chr6 (127-171)||(16349468-16349512)
chr6 (127-171)||(21801969-21802013)
chr6 (127-171)||(32113769-32113813)
chr6 (131-171)||(33950260-33950300)
chr6 (127-171)||(34280681-34280725)
[»] scaffold0361 (1 HSPs)
scaffold0361 (91-171)||(17148-17228)
[»] chr7 (46 HSPs)
chr7 (127-171)||(5228638-5228682)
chr7 (127-171)||(12677130-12677174)
chr7 (129-177)||(22711667-22711715)
chr7 (127-177)||(20261575-20261625)
chr7 (91-165)||(42813584-42813658)
chr7 (127-177)||(48872042-48872092)
chr7 (127-171)||(10412555-10412599)
chr7 (127-171)||(27144212-27144256)
chr7 (127-171)||(29615547-29615591)
chr7 (127-171)||(29823361-29823405)
chr7 (127-171)||(33869224-33869268)
chr7 (127-171)||(34999216-34999260)
chr7 (82-165)||(20115655-20115738)
chr7 (102-165)||(29736696-29736759)
chr7 (95-165)||(4518389-4518459)
chr7 (127-177)||(19333044-19333094)
chr7 (127-177)||(28308664-28308714)
chr7 (127-177)||(31221449-31221499)
chr7 (139-177)||(33576685-33576723)
chr7 (127-177)||(38987783-38987833)
chr7 (127-165)||(40344442-40344480)
chr7 (127-177)||(40401545-40401595)
chr7 (127-177)||(46011113-46011163)
chr7 (127-176)||(1573748-1573797)
chr7 (90-171)||(22263757-22263838)
chr7 (88-165)||(38669987-38670064)
chr7 (127-171)||(25287-25331)
chr7 (127-171)||(317309-317353)
chr7 (90-166)||(3341445-3341521)
chr7 (127-171)||(6184683-6184726)
chr7 (127-167)||(8535437-8535477)
chr7 (127-171)||(11639927-11639971)
chr7 (127-171)||(12679025-12679069)
chr7 (127-171)||(13068406-13068450)
chr7 (127-171)||(14078387-14078431)
chr7 (127-171)||(14388415-14388459)
chr7 (84-136)||(20096853-20096905)
chr7 (127-171)||(25607611-25607655)
chr7 (127-167)||(27619637-27619677)
chr7 (127-171)||(30738221-30738265)
chr7 (127-171)||(30870578-30870622)
chr7 (86-166)||(31388133-31388213)
chr7 (113-165)||(32867805-32867857)
chr7 (127-171)||(32867902-32867946)
chr7 (127-167)||(40400933-40400973)
chr7 (127-171)||(48982538-48982582)
[»] chr5 (29 HSPs)
chr5 (91-171)||(1406235-1406315)
chr5 (91-165)||(31849999-31850073)
chr5 (127-171)||(4877374-4877418)
chr5 (127-171)||(20570159-20570203)
chr5 (92-168)||(38497324-38497400)
chr5 (91-177)||(13279474-13279560)
chr5 (127-171)||(8573348-8573392)
chr5 (127-171)||(19408570-19408614)
chr5 (127-171)||(27979899-27979943)
chr5 (127-167)||(32458516-32458556)
chr5 (127-171)||(36742581-36742625)
chr5 (127-171)||(42598987-42599031)
chr5 (117-171)||(4717272-4717326)
chr5 (127-177)||(13685999-13686049)
chr5 (127-177)||(22731053-22731103)
chr5 (127-173)||(27028638-27028684)
chr5 (127-177)||(27979262-27979312)
chr5 (127-177)||(36737442-36737492)
chr5 (78-159)||(2074726-2074807)
chr5 (89-177)||(8437735-8437824)
chr5 (90-171)||(17780340-17780421)
chr5 (142-171)||(20217239-20217268)
chr5 (92-165)||(32050598-32050671)
chr5 (144-177)||(36853666-36853699)
chr5 (127-163)||(6029485-6029521)
chr5 (127-171)||(9017678-9017722)
chr5 (131-167)||(20570831-20570867)
chr5 (127-171)||(35751547-35751591)
chr5 (127-171)||(37658074-37658118)
[»] chr4 (41 HSPs)
chr4 (90-173)||(29429697-29429780)
chr4 (127-177)||(13482214-13482264)
chr4 (127-176)||(16192310-16192359)
chr4 (127-171)||(26705669-26705713)
chr4 (113-177)||(51019668-51019732)
chr4 (129-177)||(54096709-54096757)
chr4 (114-165)||(21037316-21037367)
chr4 (127-170)||(41919909-41919952)
chr4 (127-177)||(17730174-17730224)
chr4 (127-177)||(36898093-36898143)
chr4 (127-177)||(55814991-55815041)
chr4 (127-168)||(4949965-4950006)
chr4 (127-176)||(55068874-55068923)
chr4 (127-164)||(56310073-56310110)
chr4 (127-171)||(17722781-17722825)
chr4 (127-171)||(19313376-19313420)
chr4 (127-167)||(25010061-25010101)
chr4 (127-171)||(30192540-30192584)
chr4 (127-171)||(35667283-35667327)
chr4 (127-171)||(35667566-35667610)
chr4 (127-171)||(44665185-44665229)
chr4 (127-171)||(46095437-46095481)
chr4 (127-171)||(47030482-47030526)
chr4 (127-177)||(23722045-23722095)
chr4 (127-169)||(35667758-35667800)
chr4 (127-169)||(37423811-37423853)
chr4 (127-165)||(38720625-38720663)
chr4 (139-173)||(45847765-45847799)
chr4 (127-164)||(13772389-13772426)
chr4 (127-164)||(17723426-17723463)
chr4 (90-171)||(20545018-20545099)
chr4 (127-168)||(33047232-33047273)
chr4 (127-171)||(796414-796458)
chr4 (127-171)||(6233103-6233147)
chr4 (127-171)||(7166078-7166122)
chr4 (127-171)||(8192990-8193034)
chr4 (127-171)||(10155534-10155578)
chr4 (127-171)||(13771749-13771793)
chr4 (127-171)||(16960236-16960280)
chr4 (127-171)||(37708806-37708850)
chr4 (127-167)||(51268553-51268593)
[»] chr1 (35 HSPs)
chr1 (124-171)||(794747-794794)
chr1 (127-170)||(8061056-8061099)
chr1 (113-177)||(27225692-27225756)
chr1 (127-171)||(51362486-51362530)
chr1 (127-177)||(16536402-16536452)
chr1 (127-177)||(18406560-18406610)
chr1 (127-168)||(19071742-19071783)
chr1 (127-168)||(19119632-19119673)
chr1 (127-171)||(9091067-9091111)
chr1 (127-171)||(18407201-18407245)
chr1 (127-171)||(19072358-19072402)
chr1 (127-171)||(19120248-19120292)
chr1 (127-171)||(41321543-41321587)
chr1 (127-171)||(41575842-41575886)
chr1 (127-171)||(41576011-41576055)
chr1 (127-171)||(42831201-42831245)
chr1 (127-171)||(45738030-45738074)
chr1 (91-165)||(1114888-1114962)
chr1 (113-171)||(9997998-9998056)
chr1 (127-165)||(29344551-29344589)
chr1 (141-171)||(31766002-31766032)
chr1 (127-177)||(43320571-43320621)
chr1 (127-165)||(44645291-44645329)
chr1 (127-177)||(45737335-45737385)
chr1 (129-171)||(47553169-47553211)
chr1 (127-177)||(50143415-50143465)
chr1 (127-164)||(4007583-4007620)
chr1 (91-168)||(47233717-47233794)
chr1 (90-171)||(50144051-50144132)
chr1 (127-171)||(11916481-11916525)
chr1 (127-163)||(11917126-11917162)
chr1 (127-171)||(29510478-29510522)
chr1 (127-171)||(38011853-38011897)
chr1 (127-171)||(43319946-43319990)
chr1 (127-167)||(43504462-43504502)
[»] chr3 (48 HSPs)
chr3 (91-177)||(44500036-44500122)
chr3 (127-177)||(1262430-1262480)
chr3 (127-177)||(18364663-18364713)
chr3 (127-177)||(30605339-30605389)
chr3 (127-177)||(54605795-54605845)
chr3 (127-176)||(11345353-11345402)
chr3 (127-216)||(49765083-49765172)
chr3 (127-171)||(18365280-18365324)
chr3 (111-171)||(22518579-22518639)
chr3 (127-171)||(32737170-32737214)
chr3 (127-171)||(45241234-45241278)
chr3 (91-171)||(49080608-49080688)
chr3 (127-170)||(2756607-2756650)
chr3 (88-171)||(5963051-5963134)
chr3 (91-166)||(11397584-11397659)
chr3 (127-166)||(27255318-27255357)
chr3 (127-177)||(3090411-3090461)
chr3 (91-177)||(9830271-9830357)
chr3 (127-177)||(17764955-17765005)
chr3 (127-177)||(19066275-19066325)
chr3 (127-161)||(25259947-25259981)
chr3 (91-165)||(33115239-33115313)
chr3 (127-161)||(33979290-33979324)
chr3 (127-177)||(41587304-41587354)
chr3 (127-177)||(53490724-53490774)
chr3 (127-177)||(54403592-54403642)
chr3 (127-168)||(4757028-4757069)
chr3 (127-168)||(16067257-16067298)
chr3 (127-168)||(19547032-19547073)
chr3 (127-176)||(40036390-40036439)
chr3 (127-171)||(291782-291826)
chr3 (91-171)||(1364051-1364131)
chr3 (127-171)||(1763676-1763720)
chr3 (127-171)||(3089783-3089827)
chr3 (127-171)||(4558065-4558109)
chr3 (113-165)||(4757117-4757169)
chr3 (127-171)||(10887743-10887787)
chr3 (127-171)||(11055824-11055868)
chr3 (113-165)||(11388975-11389027)
chr3 (113-165)||(11581989-11582041)
chr3 (127-171)||(22129720-22129764)
chr3 (127-171)||(23309619-23309663)
chr3 (127-171)||(27638508-27638552)
chr3 (127-171)||(37183111-37183155)
chr3 (127-171)||(40927526-40927570)
chr3 (127-171)||(40974069-40974113)
chr3 (127-171)||(54606423-54606467)
chr3 (127-163)||(55204968-55205004)
[»] scaffold0115 (1 HSPs)
scaffold0115 (127-171)||(31353-31397)
[»] scaffold0034 (1 HSPs)
scaffold0034 (91-170)||(25901-25980)
[»] scaffold0189 (1 HSPs)
scaffold0189 (127-177)||(11320-11370)
[»] scaffold0051 (1 HSPs)
scaffold0051 (127-177)||(11623-11673)
[»] scaffold0368 (1 HSPs)
scaffold0368 (127-171)||(11257-11301)
[»] scaffold0289 (1 HSPs)
scaffold0289 (127-171)||(3439-3483)
[»] scaffold0003 (1 HSPs)
scaffold0003 (127-171)||(421178-421222)
[»] scaffold0340 (1 HSPs)
scaffold0340 (127-170)||(12860-12903)
[»] scaffold0695 (2 HSPs)
scaffold0695 (127-177)||(2254-2304)
scaffold0695 (91-171)||(2889-2969)
[»] scaffold0043 (1 HSPs)
scaffold0043 (88-165)||(67707-67784)
[»] scaffold2113 (1 HSPs)
scaffold2113 (127-171)||(757-801)
[»] scaffold0105 (1 HSPs)
scaffold0105 (127-171)||(19646-19690)
[»] scaffold0006 (1 HSPs)
scaffold0006 (127-171)||(161288-161332)


Alignment Details
Target: chr2 (Bit Score: 154; Significance: 9e-82; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 253
Target Start/End: Original strand, 15890594 - 15890831
Alignment:
Q  16 tggacatcaatttagatgatacaattcgaacacctcaaaaaataggatgtannnnnnnnattattattataaaatgagtaaattacactctctttttcta 115  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||| |   |||    
T  15890594 tggacatcaatttagatgatacaatttgaacacctcaaaaaataggatgcattttttttattattattataaaatgagtaaattacactctcctccccta 15890693  T
Q  116 agagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttgacgggtagaatgcatactctccttacctataagacactt 215  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||| |||| |||||||||||||||||||||| ||||||||||||||    
T  15890694 agagaatctttaattacacttccctccccttttatgttaaaatatacactcctctcttttgaagggtagaatgcatactctccttccctataagacactt 15890793  T
Q  216 gtttatgtacatatttctcagaatcagaatcacggtga 253  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  15890794 gtttatgtacatatttctctgaatcagaatcacagtga 15890831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 36449707 - 36449777
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatata 161  Q
    ||||||||||||||||| || |||||||||| ||| |||||||||| |||  |||||||||||||||||||    
T  36449707 gagtaaattacactctccttctctaagagaagcttgaattacactccccttttcttttatgttaaaatata 36449777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 7940037 - 7939993
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  7940037 aattacactctcctccccttttatgttaaaatatacactcccctc 7939993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 1366456 - 1366406
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  1366456 aattacactctcctcctctcttatgttaaaatatacatttccctctcttga 1366406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 40947462 - 40947503
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  40947462 aattacactctcctccccttttatgttaaaatatacactccc 40947503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 41078199 - 41078158
Alignment:
Q  130 tacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  41078199 tacactctcctcctctcttatgttaaaatatacactcccctc 41078158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 22298330 - 22298255
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactc 166  Q
    |||||||||||||||   | ||||||||||| ||| ||||||||||  |||| || ||||||||||||||||||||    
T  22298330 gagtaaattacactcctctcttctaagagaagcttgaattacactcctctcccctcttatgttaaaatatacactc 22298255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 33476600 - 33476550
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||  ||||||| |||||||||||||||| ||||||||||||||    
T  33476600 aattacactcatctcctctcttatgttaaaatatacgctcccctctcttga 33476550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 37199643 - 37199593
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| |||||    
T  37199643 aattacactcccctcccctcttatgttaaaatatacactcccctcccttga 37199593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 26196237 - 26196278
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  26196237 aattacactctcatcctctcttatgttaaaatatacactccc 26196278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 10357164 - 10357120
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  10357164 aattacactcccctcccctcttatgttaaaatatacactcccctc 10357120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 11051589 - 11051633
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| || ||||| |||||||||||||||||||||||||    
T  11051589 aattacactccccacctctcttatgttaaaatatacactcccctc 11051633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 44332426 - 44332382
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||| ||| || |||||||||||||||||||||||||    
T  44332426 aattacactctcatcccctcttatgttaaaatatacactcccctc 44332382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 3044958 - 3045001
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccct 170  Q
    |||||||||||||||  || ||||||||||||||||||||||||    
T  3044958 aattacactctcctcacctcttatgttaaaatatacactcccct 3045001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 7939357 - 7939440
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgacgggtagaatgcatactctccttacctataaga 210  Q
    |||||||||||||| | || |||||||||||||||||||  |||| |||||   ||| |||  ||||||||||| |||||||||    
T  7939357 aattacactctccttccctcttatgttaaaatatacacttacctcccttgaaaagtaaaatttatactctcctttcctataaga 7939440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 13874029 - 13873990
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactc 166  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  13874029 aattacactcttctcctctcttatgttaaaatatacactc 13873990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 14014154 - 14014115
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactc 166  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  14014154 aattacactcttctcctctcttatgttaaaatatacactc 14014115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 35175642 - 35175696
Alignment:
Q  116 agagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||| |||||| ||||||| ||||| || |||||||||||||||||||||||||    
T  35175642 agagaagctttaactacactc-cctcccctcttatgttaaaatatacactcccctc 35175696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 6229928 - 6229878
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||| | || ||||||||||||||||||||||||| |||||    
T  6229928 aattacactccccttccctcttatgttaaaatatacactcccctcccttga 6229878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 31597255 - 31597305
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||| ||||||||| |||||    
T  31597255 aattacactcacctcccctcttatgttaaaatataaactcccctcccttga 31597305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 33146065 - 33146115
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||| ||||| ||||| || ||||||||||||||||||||||||| |||||    
T  33146065 aattgcactcccctcccctcttatgttaaaatatacactcccctcccttga 33146115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 34173757 - 34173707
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||| ||||||| |||||    
T  34173757 aattacactcccctcccctcttatgttaaaatatacattcccctcccttga 34173707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 37009703 - 37009653
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||  |||| || ||||||||||||||||||||||||| |||||    
T  37009703 aattacactcctctcccctcttatgttaaaatatacactcccctcccttga 37009653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 38910705 - 38910743
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  38910705 aattacactcccctcctctcttatgttaaaatatacact 38910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 40768822 - 40768908
Alignment:
Q  85 taaaatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||| |||||||||||| |  | |||||| | |||  ||| ||||||| ||||||   ||||||||||||||||||||||||||||    
T  40768822 taaaaagagtaaattacatttcccttttctcaaagatgcttgaattacattctcctttccttttatgttaaaatatacactcccctc 40768908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 41521704 - 41521667
Alignment:
Q  134 ctctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||| || |||||||||||||||||||||||||    
T  41521704 ctctcctcccctcttatgttaaaatatacactcccctc 41521667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 3515516 - 3515472
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||| | ||||| || |||||||||||||||||||||||||    
T  3515516 aattacacccccctcccctcttatgttaaaatatacactcccctc 3515472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 5475177 - 5475141
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatataca 163  Q
    |||||||||||||||| || |||||||||||||||||    
T  5475177 aattacactctcctcccctcttatgttaaaatataca 5475141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 8313686 - 8313726
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcc 167  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  8313686 aattacactcccctcccctcttatgttaaaatatacactcc 8313726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 11796170 - 11796214
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||| ||||||||||||    
T  11796170 aattacactcccctcccctcttatgttaaaatgtacactcccctc 11796214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 175
Target Start/End: Original strand, 17449771 - 17449799
Alignment:
Q  147 ttatgttaaaatatacactcccctctctt 175  Q
    |||||||||||||||||||||||||||||    
T  17449771 ttatgttaaaatatacactcccctctctt 17449799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 17829081 - 17829125
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||  |||| || |||||||||||||||||||||||||    
T  17829081 aattacactccactcccctcttatgttaaaatatacactcccctc 17829125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 20894324 - 20894280
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  20894324 aattacactcccctcccctcttaagttaaaatatacactcccctc 20894280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 34173076 - 34173120
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  34173076 aattacactaccctcccctcttatgttaaaatatacactcccctc 34173120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 34579649 - 34579693
Alignment:
Q  121 atctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||| ||||||| | | |||||||||||||||||||||||||||    
T  34579649 atcttaaattacattattctcctcttttatgttaaaatatacact 34579693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 34585398 - 34585442
Alignment:
Q  121 atctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||| ||||||| | | |||||||||||||||||||||||||||    
T  34585398 atcttaaattacattattctcctcttttatgttaaaatatacact 34585442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 35899168 - 35899212
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  35899168 aattacactcccctcccctcttaagttaaaatatacactcccctc 35899212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 42706962 - 42706890
Alignment:
Q  94 taaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactc 166  Q
    ||||||||| | ||||||  ||||| || ||| ||||||||||| ||| ||| |||||||||||||| |||||    
T  42706962 taaattacattatcttttcgtaagataaacttgaattacactcttctcatctcttatgttaaaatatgcactc 42706890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 59255 - 59341
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||||||| |  ||||| |||  ||| |||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  59255 gagtaaattacactctcctcctctaaaagatgcttgaattacactctcctcccctcttatgttaaaatatacactcccctcccttga 59341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 8438647 - 8438561
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||| | ||| ||||||||||| ||| ||||||||||  || |||| |||||||||||||||||||||||||| ||||    
T  8438647 gagtaaattacacccccttcttctaagagaaacttgaattacactccacttctctcttatgttaaaatatacactcccctctattga 8438561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 37266191 - 37266136
Alignment:
Q  122 tctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||||||||||| || ||||||||||||||||||||| ||| |||||    
T  37266191 tctttaattacactctcctcccctcttatgttaaaatatacactccactcccttga 37266136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 33452403 - 33452317
Alignment:
Q  92 agtaaattacactctctttttctaagagaatctttaattacactctcctcctc-ttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||||   ||||||||||||| | | ||||||||| | |||||| |||||||||||||||||||| |  |||||||||    
T  33452403 agtaaattacactcatcttttctaagagaagcataaattacacttttctcctctttttatgttaaaatatacacacttctctcttga 33452317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 3076045 - 3075960
Alignment:
Q  92 agtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||||||| |  ||| | |||  ||| |||||||||| ||||  || |||| ||||||||||||||||||||||||||    
T  3076045 agtaaattacactctcctcctctcaaagatgcttgaattacactcccctctcctcttatattaaaatatacactcccctctcttga 3075960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 11140090 - 11140171
Alignment:
Q  90 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||| ||||||||||| | | | |||| |||  ||| |||||||||| ||||| || |||||||||||||||||||||||||    
T  11140090 tgagcaaattacactcccgtctcctaaaagatacttgaattacactcccctcccctcttatgttaaaatatacactcccctc 11140171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 8437930 - 8437974
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||    
T  8437930 aattacactccactcctctcttatgttaaaatatacactcccctc 8437974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 11141105 - 11141061
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||| || |||||||| |||||||||||||||||||||||||    
T  11141105 aattacattcccctcctctcttatgttaaaatatacactcccctc 11141061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 13422110 - 13422066
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  13422110 aattacactcccctcccctcttatgttaaaatatacactcccctc 13422066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 32905371 - 32905327
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||    
T  32905371 aattacactctcctccctttttatgttaaaatatacacttccctc 32905327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 37304936 - 37304896
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcc 167  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  37304936 aattacactctccttctcttttatgttaaaatatagactcc 37304896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 41311703 - 41311747
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||    
T  41311703 aattacactctactccccttttatgttaaaatatacattcccctc 41311747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 11760111 - 11760072
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactc 166  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  11760111 aattacattctcctcctctcttatgttaaaatatacactc 11760072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 31846444 - 31846523
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccct 170  Q
    ||||||||||||||||| ||  |||| |||   || |||||||||  ||||| || ||||||||||||||||||||||||    
T  31846444 gagtaaattacactctccttccctaaaagatgattgaattacacttccctcccctcttatgttaaaatatacactcccct 31846523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 5551586 - 5551636
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||||||||| ||||| ||||||||||| || |||| |||||    
T  5551586 aattacactctcctcctctcttatgctaaaatatacaatctcctcccttga 5551636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 14094194 - 14094144
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || |||||||||||| |||||||||||| |||||    
T  14094194 aattacactcccctcccctcttatgttaaaatttacactcccctcccttga 14094144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 17564701 - 17564751
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||  ||||| || ||||||||||||||||||||||||| |||||    
T  17564701 aattacacttccctcccctcttatgttaaaatatacactcccctcccttga 17564751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 24778021 - 24778059
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||||||||||| || |||||||||||||||||||    
T  24778021 aattacactctcctcccctcttatgttaaaatatacact 24778059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 30354559 - 30354521
Alignment:
Q  139 ctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  30354559 ctcctcttttatgttaaaatatacactcctctcccttga 30354521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 37836952 - 37837002
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||| |||||    
T  37836952 aattacactccccttctctattatgttaaaatatacattcccctcccttga 37837002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 40791079 - 40791129
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||| |||||||||| || ||||||||||||||||||| ||||| |||||    
T  40791079 aattatactctcctcccctcttatgttaaaatatacactaccctcccttga 40791129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 44284430 - 44284356
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||||||||| | |   ||||||||  ||| |||||||||| ||||| || |||||||||||||||||||    
T  44284430 gagtaaattacactcccctcccctaagagatgcttgaattacactcccctcccctcttatgttaaaatatacact 44284356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 3075339 - 3075380
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||| ||||| || ||||||||||||||||||||||    
T  3075339 aattacactcccctcccctcttatgttaaaatatacactccc 3075380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 6099520 - 6099475
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctct 172  Q
    |||||||||||||||  || ||||||||||||||||| ||||||||    
T  6099520 aattacactctcctctcctcttatgttaaaatatacaatcccctct 6099475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 34923885 - 34923918
Alignment:
Q  138 cctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||| |||||||||||||||||||||||||    
T  34923885 cctcctctcttatgttaaaatatacactcccctc 34923918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 36016803 - 36016762
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    ||||||| || |||||||| ||||||||||||||||||||||    
T  36016803 aattacaatcccctcctctcttatgttaaaatatacactccc 36016762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 13421474 - 13421518
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||| ||  || |||||||||||||||||||||||||    
T  13421474 aattacactctcatctcctcttatgttaaaatatacactcccctc 13421518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 14093478 - 14093558
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||||||   || | |||  ||| ||||||||||  ||| ||| ||| |||||||||||||||||||||    
T  14093478 gagtaaattacactctcttccccttaaagatgcttaaattacactcctctcatctcttaagttaaaatatacactcccctc 14093558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 14363808 - 14363852
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  14363808 aattacactcccctcccctcttaagttaaaatatacactcccctc 14363852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 14879553 - 14879589
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatataca 163  Q
    |||||||||||||||| || |||||||||||||||||    
T  14879553 aattacactctcctcccctcttatgttaaaatataca 14879589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 14880232 - 14880188
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||||||||||||||||||| |||||    
T  14880232 aattacactcccctcccctcttatgttaaaatatacacttccctc 14880188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 22934322 - 22934366
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  22934322 aattacactcccctcccctcttaagttaaaatatacactcccctc 22934366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 30991425 - 30991373
Alignment:
Q  113 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||| ||| ||||||| || |||||||| |||||||||||| ||||||    
T  30991425 ctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacact 30991373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 31739542 - 31739586
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||| || ||| || |||||||||||||||||||||||||    
T  31739542 aattacactgtcatcccctcttatgttaaaatatacactcccctc 31739586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 32904263 - 32904219
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||||||||||||||||||| |||||    
T  32904263 aattacactcccctcccctcttatgttaaaatatacacttccctc 32904219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 37872303 - 37872339
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatataca 163  Q
    |||||||||| |||||||| |||||||||||||||||    
T  37872303 aattacactcccctcctctcttatgttaaaatataca 37872339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 39998403 - 39998447
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||| ||||||||| |||||||||||    
T  39998403 aattacactctcctcccctcttaagttaaaatacacactcccctc 39998447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 40791799 - 40791755
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||  |||| || |||||||||||||||||||||||||    
T  40791799 aattacactcctctcccctcttatgttaaaatatacactcccctc 40791755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 41312424 - 41312380
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||||||||||||||||| |||||||    
T  41312424 aattacactcccctcccctcttatgttaaaatatacattcccctc 41312380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 21802684 - 21802598
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||||||| |  ||||| |||  ||| |||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  21802684 gagtaaattacactctcctcctctaaaagatgcttgaattacactctcctcccctcttatgttaaaatatacactcccctcccttga 21802598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 12767687 - 12767600
Alignment:
Q  90 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||||||| | | | ||||||||| ||| |||||||||| ||||| || ||||||||||||||||||| ||||| |||||    
T  12767687 tgagtaaattacactcccctctcctaagagaagcttgaattacactcccctcccctcttatgttaaaatatacacttccctcccttga 12767600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 31881871 - 31881917
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctc 173  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  31881871 aattacactcccctccccttttatgttaaaatatacactcccctctc 31881917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 4125907 - 4125951
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || |||||||||||||||||||||||||    
T  4125907 aattacactctcctcccctcttatgttaaaatatacactcccctc 4125951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 2522699 - 2522749
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||||||| || |||| |||||||||||||||||||| |||||    
T  2522699 aattacactctcctcccctcttatattaaaatatacactcccctcccttga 2522749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 4100545 - 4100589
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  4100545 aattacactcccctcccctcttatgttaaaatatacactcccctc 4100589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 12026241 - 12026197
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  12026241 aattacactcccctcccctcttatgttaaaatatacactcccctc 12026197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 21847429 - 21847369
Alignment:
Q  111 ttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||| || ||| ||||| |||||||||| || ||||||||||||||||||| |||||    
T  21847429 ttctaagaaaagcttgaattagactctcctcccctcttatgttaaaatatacacttccctc 21847369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 22022318 - 22022274
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||| ||| || |||||||||||||||||||||||||    
T  22022318 aattacactctcatcccctcttatgttaaaatatacactcccctc 22022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 25527760 - 25527804
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  25527760 aattacactctcctcccctcttaagttaaaatatacactcccctc 25527804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 6936405 - 6936444
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactc 166  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  6936405 aattacactctcctcccctcttatgttaaaatatacactc 6936444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 188477 - 188431
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctc 173  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||||    
T  188477 aattacactcccctcccctcttaagttaaaatatacactcccctctc 188431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 15499527 - 15499490
Alignment:
Q  140 tcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  15499527 tcctctcttatgttaaaatatacactcccctcccttga 15499490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 7127701 - 7127657
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| |||||| |||||||| ||||||||||||    
T  7127701 aattacactcccctccccttttaagttaaaatgtacactcccctc 7127657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 7448259 - 7448295
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatataca 163  Q
    |||||||||||||| |||| |||||||||||||||||    
T  7448259 aattacactctccttctctcttatgttaaaatataca 7448295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 10702301 - 10702345
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  10702301 aattacacttccctcccctcttatgttaaaatatacactcccctc 10702345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 11522830 - 11522874
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  11522830 aattacactcccctcccctcttaagttaaaatatacactcccctc 11522874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 12033161 - 12033117
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  12033161 aattacactcccctcccctcttaagttaaaatatacactcccctc 12033117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 12409407 - 12409487
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||| | |   ||||||||| ||| ||| |||||| ||||| ||  ||||||||||||||||||| ||||    
T  12409407 gagtaaattacactcccctcccctaagagaagcttgaatcacactcccctcccctcctatgttaaaatatacactctcctc 12409487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 12767055 - 12767107
Alignment:
Q  113 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||| ||| ||||||| |||||||| || |||||||||||| ||||||    
T  12767055 ctaagagaagcttgaattacattctcctcccctcttatgttaaaatttacact 12767107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 14313893 - 14313849
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||||||||||||||||| |||||||    
T  14313893 aattacactcccctcccctcttatgttaaaatatacaatcccctc 14313849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 16326114 - 16326070
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||| ||||||||||||||||||||    
T  16326114 aattacactcacctcccctcttatattaaaatatacactcccctc 16326070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 16349512 - 16349468
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||| ||||||||||||||||||||    
T  16349512 aattacactcacctcccctcttatattaaaatatacactcccctc 16349468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 21801969 - 21802013
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| |||||  | |||||||||||||||||||||||||    
T  21801969 aattacactcccctccattcttatgttaaaatatacactcccctc 21802013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 32113769 - 32113813
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  32113769 aattacacttccctcccctcttatgttaaaatatacactcccctc 32113813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 33950260 - 33950300
Alignment:
Q  131 acactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  33950260 acactctcctcccctcttattttaaaatatacactcccctc 33950300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 34280725 - 34280681
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  34280725 aattacactcccctcccctcttaagttaaaatatacactcccctc 34280681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 17228 - 17148
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||| | | ||||||||||| ||| |||||||||| | ||| || |||||||||||||||||||||||||    
T  17228 gagtaaattacactcccctcttctaagagaagcttgaattacactcacatcccctcttatgttaaaatatacactcccctc 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 5228682 - 5228638
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  5228682 aattacactctcctccccttttatgttaaaatatacactcccctc 5228638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 12677130 - 12677174
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || |||||||||||||||||||||||||    
T  12677130 aattacactctcctcccctcttatgttaaaatatacactcccctc 12677174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 22711667 - 22711715
Alignment:
Q  129 ttacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||||| || ||||||||||||||||||||| |||||||||    
T  22711667 ttacactctcctcccctcttatgttaaaatatacactccactctcttga 22711715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 20261625 - 20261575
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| |||||    
T  20261625 aattacactctcatcccctcttatgttaaaatatacactcccctcccttga 20261575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 42813658 - 42813584
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||||||||||| ||  || | |||  ||| |||||||||| |||||||| |||||||||||||||||||    
T  42813658 gagtaaattacactctcattccctcaaagatgcttgaattacactcccctcctctcttatgttaaaatatacact 42813584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 48872042 - 48872092
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||| || |||||||| ||||||||||||||||||||||||| |||||    
T  48872042 aattacattcccctcctctcttatgttaaaatatacactcccctcccttga 48872092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 10412599 - 10412555
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  10412599 aattacactctcctcccctcttatgttaaaatatacacttccctc 10412555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 27144212 - 27144256
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  27144212 aattacactcccctcccctcttatgttaaaatatacactcccctc 27144256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 29615547 - 29615591
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||||||||||||||||| |||||||    
T  29615547 aattacactctcctcccctcttatgttaaaatatacattcccctc 29615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 29823361 - 29823405
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  29823361 aattacactctcctcccctcttaagttaaaatatacactcccctc 29823405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 33869224 - 33869268
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||  || |||||||||||||||||||||||||    
T  33869224 aattacactctcctctcctcttatgttaaaatatacactcccctc 33869268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 34999216 - 34999260
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  34999216 aattacactcccctcccctcttatgttaaaatatacactcccctc 34999260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 20115738 - 20115655
Alignment:
Q  82 ttataaaatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||| ||| |||||||||||| |||| |||||||||| ||| ||||||||||   |  ||| ||||||| |||||||||||    
T  20115738 ttataaattgattaaattacactccctttctctaagagaagcttgaattacactcatattttctcttatgttgaaatatacact 20115655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 29736759 - 29736696
Alignment:
Q  102 actctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||| ||||||||||| ||| ||||||| |||| ||| || |||||||||||| ||||||    
T  29736759 actctcttcttctaagagaagcttgaattacattctcatcccctcttatgttaaaatctacact 29736696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 4518389 - 4518459
Alignment:
Q  95 aaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||||||||||  ||||||||| ||| ||||||| |||| ||| || | |||||||||| ||||||    
T  4518389 aaattacactctctttccctaagagaagcttaaattacattctcatcccctctaatgttaaaatctacact 4518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 19333094 - 19333044
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||  ||||||||||| |||||||||||||||| ||| ||||||    
T  19333094 aattacactcctctcctcttttaagttaaaatatacactctcctttcttga 19333044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 28308714 - 28308664
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||| ||  || ||||||||||||||||||||||||| |||||    
T  28308714 aattacactctcatctcctcttatgttaaaatatacactcccctcccttga 28308664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 31221499 - 31221449
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| |||||  | ||||||||||||||||||||||||| |||||    
T  31221499 aattacactcccctcccttcttatgttaaaatatacactcccctcccttga 31221449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 33576723 - 33576685
Alignment:
Q  139 ctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  33576723 ctcctctcttatgttaaaatatacactcccctcttttga 33576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 38987783 - 38987833
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||| |||| ||||| || ||||||||||||||||||||| |||||||||    
T  38987783 aattaaactcccctcccctcttatgttaaaatatacactccactctcttga 38987833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 40344480 - 40344442
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||||||||||| || |||||||||||||||||||    
T  40344480 aattacactctcctcccctcttatgttaaaatatacact 40344442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 40401595 - 40401545
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || |||||||||||||||||||||| || |||||    
T  40401595 aattacactcccctcccctcttatgttaaaatatacactcccttcccttga 40401545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 46011163 - 46011113
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||| |||| |||||||||||||| |||||||||| |||||    
T  46011163 aattacactccccttctctcttatgttaaaatatgcactcccctcccttga 46011113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 1573797 - 1573748
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttg 176  Q
    |||||||||| ||||| || |||||||||||||||||||| |||| ||||    
T  1573797 aattacactcccctcccctcttatgttaaaatatacactcacctcccttg 1573748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 22263757 - 22263838
Alignment:
Q  90 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| | |  ||| | |||  ||| ||||||| ||| ||||||| ||||||||||||||||||| |||||    
T  22263757 tgagtaaattacactcccctcctctcaaagatgcttgaattacattcttctcctctcttatgttaaaatatacacttccctc 22263838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 38669987 - 38670064
Alignment:
Q  88 aatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||||||||||||| | | | || | |||  ||| |||||||||||||||| || ||| |||||||||||||||    
T  38669987 aatgagtaaattacactcccctctccttaaagatgcttgaattacactctcctcccctcttaagttaaaatatacact 38670064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 25287 - 25331
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  25287 aattacactcccctcccctcttaagttaaaatatacactcccctc 25331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 317309 - 317353
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  317309 aattacactcccctcccctcttaagttaaaatatacactcccctc 317353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 3341521 - 3341445
Alignment:
Q  90 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactc 166  Q
    ||||||||||||||||  |||  || | |||  ||| |||||||||||||||  || ||||||||||||||||||||    
T  3341521 tgagtaaattacactccatttccctcaaagatgcttgaattacactctcctctcctcttatgttaaaatatacactc 3341445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 6184683 - 6184726
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  6184683 aattacactctcctcc-ctcttaagttaaaatatacactcccctc 6184726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 8535477 - 8535437
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcc 167  Q
    |||||||||| ||||| |||||||||||||||||| |||||    
T  8535477 aattacactcccctccccttttatgttaaaatatatactcc 8535437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 11639927 - 11639971
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||| ||||    
T  11639927 aattacactcccctcccctcttatgttaaaatatacactctcctc 11639971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 12679025 - 12679069
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||| |||||||||| || ||||||||||||||||| |||||||    
T  12679025 aattatactctcctcccctcttatgttaaaatatacattcccctc 12679069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 13068450 - 13068406
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||  |||||| | |||||||||||||||||||||||||    
T  13068450 aattacacttccctcctttcttatgttaaaatatacactcccctc 13068406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 14078387 - 14078431
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||| |||||| ||| || |||||||||||||||||||||||||    
T  14078387 aattaaactctcttcccctcttatgttaaaatatacactcccctc 14078431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 14388415 - 14388459
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||| |||||| ||| || |||||||||||||||||||||||||    
T  14388415 aattaaactctcttcccctcttatgttaaaatatacactcccctc 14388459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 20096905 - 20096853
Alignment:
Q  84 ataaaatgagtaaattacactctctttttctaagagaatctttaattacactc 136  Q
    ||||| ||||||||||||||||  ||||||||||||||  || ||||||||||    
T  20096905 ataaattgagtaaattacactccatttttctaagagaagtttgaattacactc 20096853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 25607655 - 25607611
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  25607655 aattacactcccctcccctcttaagttaaaatatacactcccctc 25607611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 27619677 - 27619637
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcc 167  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  27619677 aattacactcccctcccctcttatgttaaaatatacactcc 27619637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 30738221 - 30738265
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||| |||||| |||||||||||| |||| |||||||    
T  30738221 aattacactctcatcctctcttatgttaaaatttacattcccctc 30738265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 30870622 - 30870578
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||| |||||||| | ||| |||||||||||||||||||||    
T  30870622 aattacacgctcctcctttcttaggttaaaatatacactcccctc 30870578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 31388213 - 31388133
Alignment:
Q  86 aaaatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactc 166  Q
    |||| ||||||||||||||||| ||  ||||||||| ||| ||||||| | | ||  ||| |||||||||||| |||||||    
T  31388213 aaaaagagtaaattacactctccttccctaagagaagcttgaattacattattcttttctcttatgttaaaatctacactc 31388133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 32867857 - 32867805
Alignment:
Q  113 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||| ||| ||||||| || |||||||| |||||||||||| ||||||    
T  32867857 ctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacact 32867805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 32867946 - 32867902
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||  |||| || |||||||||||||||||||||||||    
T  32867946 aattacactcctctcccctcttatgttaaaatatacactcccctc 32867902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 40400933 - 40400973
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcc 167  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  40400933 aattacactctcatcccctcttatgttaaaatatacactcc 40400973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 48982582 - 48982538
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  48982582 aattacacttccctcccctcttatgttaaaatatacactcccctc 48982538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 1406315 - 1406235
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||| | || |||||||||| ||| |||||||||||| ||  || |||||||||||||||||||| ||||    
T  1406315 gagtaaattacactccccttctctaagagaagcttgaattacactctcatctcctcttatgttaaaatatacactctcctc 1406235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 31849999 - 31850073
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||||||||| | |  |||||||||  ||| |||||||||||| |||||| |||||||||||||||||||    
T  31849999 gagtaaattacactcccctcgtctaagagatgcttgaattacactctcatcctctcttatgttaaaatatacact 31850073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 4877418 - 4877374
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || |||||||||||||||||||||||||    
T  4877418 aattacactctcctcccctcttatgttaaaatatacactcccctc 4877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 20570159 - 20570203
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  20570159 aattacactcccctcctctcttatgttaaaatatacactcccctc 20570203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 38497324 - 38497400
Alignment:
Q  92 agtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||||||| | |  |||||||||| ||| ||||||||||| |||| || ||||||||||||||||| ||||    
T  38497324 agtaaattacactcccctcctctaagagaagcttgaattacactcttctcccctcttatgttaaaatatacattccc 38497400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 13279474 - 13279560
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||||| | |  |||||||||| ||| |||||||||  |||||||| |||||||||||| |||| || |||| |||||    
T  13279474 gagtaaattacactcccctcctctaagagaagcttgaattacacttccctcctctcttatgttaaaatctacattctcctcccttga 13279560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 8573392 - 8573348
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||| | || |||||||||||||||||||||||||    
T  8573392 aattacactctccttccctcttatgttaaaatatacactcccctc 8573348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 19408570 - 19408614
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  19408570 aattacactcccctcccctcttatgttaaaatatacactcccctc 19408614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 27979943 - 27979899
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||| |||||| ||| |||||||||||||||||||||||||    
T  27979943 aattacaccctcctcatctcttatgttaaaatatacactcccctc 27979899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 32458556 - 32458516
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcc 167  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  32458556 aattacactctcctccccttttatattaaaatatacactcc 32458516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 36742625 - 36742581
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  36742625 aattacactcccctcccctcttatgttaaaatatacactcccctc 36742581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 42599031 - 42598987
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  42599031 aattacactctcctccactcttatgttaaaatatacacttccctc 42598987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 4717326 - 4717272
Alignment:
Q  117 gagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||| ||| |||||||||||| |||  | |||||||||||||||||||||||||    
T  4717326 gagaagcttgaattacactctcatcccttcttatgttaaaatatacactcccctc 4717272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 13685999 - 13686049
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||| ||| || |||||||||||||||||||| ||| ||||||    
T  13685999 aattacactctcatcccctcttatgttaaaatatacactctcctttcttga 13686049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 22731103 - 22731053
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| |||||  | |||||||||||||||||||||||||| ||||    
T  22731103 aattacactcccctcccttcttatgttaaaatatacactcccctcttttga 22731053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 27028684 - 27028638
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctc 173  Q
    |||||||||| |||||||| ||||||||||||||| ||||| |||||    
T  27028684 aattacactcccctcctctcttatgttaaaatatatactcctctctc 27028638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 27979262 - 27979312
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||| ||||||| |||||    
T  27979262 aattacactcccctcccctcttatgttaaaatatacattcccctcccttga 27979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 36737492 - 36737442
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||||| ||||| |||||    
T  36737492 aattacactcccctcccctcttatgttaaaatatacacttccctcccttga 36737442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 2074807 - 2074726
Alignment:
Q  78 attattataaaatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaata 159  Q
    ||||||||  || |||||||||| |||| | ||  ||||||||| ||| |||||||||| ||||| || |||||||||||||    
T  2074807 attattatttaaagagtaaattatactccccttccctaagagaaacttgaattacactcccctcccctcttatgttaaaata 2074726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 8437735 - 8437824
Alignment:
Q  89 atgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacac-tcccctctcttga 177  Q
    ||||||||||||||||||||| |  ||||| || ||| |||||||||  ||||   | ||||||||||||||| || |||||||||||||    
T  8437735 atgagtaaattacactctcttctcttaagaaaagcttaaattacacttccctcacttcttatgttaaaatatatacttcccctctcttga 8437824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 17780340 - 17780421
Alignment:
Q  90 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||| ||||  ||| | |||  ||| |||||||||   ||||||| |||||||||||||||||||| ||||    
T  17780340 tgagtaaattacactttcttcctctcaaagatgcttgaattacactactctcctctcttatgttaaaatatacactctcctc 17780421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 171
Target Start/End: Complemental strand, 20217268 - 20217239
Alignment:
Q  142 ctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||||||||||||||||||    
T  20217268 ctcttttatgttaaaatatacactcccctc 20217239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 32050598 - 32050671
Alignment:
Q  92 agtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||||||||| | |||||| | |||  ||| |||||||||||| | |||| |||||||||||| ||||||    
T  32050598 agtaaattacactcccgttttctcaaagatgcttgaattacactctcattctctcttatgttaaaatgtacact 32050671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 36853666 - 36853699
Alignment:
Q  144 cttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||||||||||||||||||| |||||    
T  36853666 cttttatgttaaaatatacactcccctcccttga 36853699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 6029485 - 6029521
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatataca 163  Q
    |||||||||||| |||||| |||||||||||||||||    
T  6029485 aattacactctcatcctctcttatgttaaaatataca 6029521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 9017678 - 9017722
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||||||||||||||||||| |||||    
T  9017678 aattacactcccctcccctcttatgttaaaatatacacttccctc 9017722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 20570867 - 20570831
Alignment:
Q  131 acactctcctcctcttttatgttaaaatatacactcc 167  Q
    |||||||||||| || |||||||||||||||||||||    
T  20570867 acactctcctcccctcttatgttaaaatatacactcc 20570831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 35751547 - 35751591
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| | ||| || |||||||||||||||||||||||||    
T  35751547 aattacactcccttcccctcttatgttaaaatatacactcccctc 35751591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 37658118 - 37658074
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  37658118 aattacactcccctcccctcttaagttaaaatatacactcccctc 37658074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 29429780 - 29429697
Alignment:
Q  90 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctc 173  Q
    |||||||||| ||||| | ||  ||||||||  ||| |||||||||||||| |||| ||||||||||||||||||| |||||||    
T  29429780 tgagtaaattgcactccccttccctaagagatgcttgaattacactctccttctctcttatgttaaaatatacacttccctctc 29429697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 13482214 - 13482264
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  13482214 aattacactctcctcccctcttatgttaaaatatacactcccctcccttga 13482264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 16192359 - 16192310
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttg 176  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  16192359 aattacactcccctcctctcttatgttaaaatatacactcccctcacttg 16192310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 26705713 - 26705669
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  26705713 aattacactcccctcctctcttatgttaaaatatacactcccctc 26705669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 51019668 - 51019732
Alignment:
Q  113 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||  ||| |||||||||||||||| || ||||||||||||||||||| ||||| |||||    
T  51019668 ctaagagatgcttgaattacactctcctcccctcttatgttaaaatatacacttccctcccttga 51019732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 54096757 - 54096709
Alignment:
Q  129 ttacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||    
T  54096757 ttacactctcctccccttttatgttaaaatatacactcccatcccttga 54096709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 21037316 - 21037367
Alignment:
Q  114 taagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||| ||| |||||||||| |||||||| |||||||||||||||||||    
T  21037316 taagagaagcttgaattacactcccctcctctcttatgttaaaatatacact 21037367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 41919952 - 41919909
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccct 170  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  41919952 aattacactcttctcctctcttatgttaaaatatacactcccct 41919909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 17730224 - 17730174
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||||||||  |||||||||||||||||||||| ||||| |||||    
T  17730224 aattacactctcctctccttttatgttaaaatatacactaccctcccttga 17730174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 36898143 - 36898093
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||  |||||||||||||||||||||||||||| |||||    
T  36898143 aattacactcccctctccttttatgttaaaatatacactcccctcccttga 36898093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 55815041 - 55814991
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||| |||||    
T  55815041 aattacactctcctcctctcttacgttaaaatatacactcctctcccttga 55814991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 4949965 - 4950006
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  4949965 aattacactcccctcctctcttatgttaaaatatacactccc 4950006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 55068874 - 55068923
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttg 176  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| ||||    
T  55068874 aattacactcccctcccctcttatgttaaaatatacactcccctcccttg 55068923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 56310110 - 56310073
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacac 164  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  56310110 aattacactctcctcctctcttatgttaaaatatacac 56310073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 17722781 - 17722825
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  17722781 aattacactcccctcccctcttatgttaaaatatacactcccctc 17722825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 19313376 - 19313420
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||| ||| || |||||||||||||||||||||||||    
T  19313376 aattacactctcatcccctcttatgttaaaatatacactcccctc 19313420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 25010101 - 25010061
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcc 167  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  25010101 aattacactctcctcccctcttatgttaaaatatacactcc 25010061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 30192540 - 30192584
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  30192540 aattacactctcctcccctcttatgttaaaatatacacttccctc 30192584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 35667327 - 35667283
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  35667327 aattacactcccctcccctcttatgttaaaatatacactcccctc 35667283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 35667610 - 35667566
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||| |||||| || |||||||||||||||||||||||||    
T  35667610 aattacactttcctcccctcttatgttaaaatatacactcccctc 35667566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 44665229 - 44665185
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||| ||| ||||| ||||||||||||||||||||||||||||    
T  44665229 aattacgctcccctccccttttatgttaaaatatacactcccctc 44665185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 46095437 - 46095481
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  46095437 aattacactctcctcccctcttaagttaaaatatacactcccctc 46095481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 47030526 - 47030482
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  47030526 aattacactctcctcccctcttaagttaaaatatacactcccctc 47030482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 23722095 - 23722045
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||||| ||||| |||||    
T  23722095 aattacactcccctcccctcttatgttaaaatatacactaccctcccttga 23722045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 35667800 - 35667758
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccc 169  Q
    |||||||||| ||||| || |||||||||||||||||||||||    
T  35667800 aattacactcccctcccctcttatgttaaaatatacactcccc 35667758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 37423811 - 37423853
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccc 169  Q
    |||||||||| ||||| || |||||||||||||||||||||||    
T  37423811 aattacactcccctcccctcttatgttaaaatatacactcccc 37423853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 38720663 - 38720625
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  38720663 aattacactctcatcctctcttatgttaaaatatacact 38720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 173
Target Start/End: Complemental strand, 45847799 - 45847765
Alignment:
Q  139 ctcctcttttatgttaaaatatacactcccctctc 173  Q
    ||||||| |||||||||||||||||||||||||||    
T  45847799 ctcctctcttatgttaaaatatacactcccctctc 45847765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 13772426 - 13772389
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacac 164  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  13772426 aattacactctcatcctctcttatgttaaaatatacac 13772389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 17723463 - 17723426
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacac 164  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  17723463 aattacactcccctccccttttatgttaaaatatacac 17723426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 20545099 - 20545018
Alignment:
Q  90 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| | |   || |||||  ||| |||||||||| ||||| || ||||||||||||||||| |||||||    
T  20545099 tgagtaaattacactcccctcccctcagagatgcttgaattacactcccctcccctcttatgttaaaatatacattcccctc 20545018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 33047273 - 33047232
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||| ||||| || ||||||||||||||||||||||    
T  33047273 aattacactcccctcccctcttatgttaaaatatacactccc 33047232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 796414 - 796458
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  796414 aattacactcccctcccctcttaagttaaaatatacactcccctc 796458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 6233147 - 6233103
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  6233147 aattacactcccctcccctcttaagttaaaatatacactcccctc 6233103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 7166122 - 7166078
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||  |||||||| ||| |||||||||||||||||||||    
T  7166122 aattacacttccctcctctcttaagttaaaatatacactcccctc 7166078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 8193034 - 8192990
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  8193034 aattacactcccctcccctcttaagttaaaatatacactcccctc 8192990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 10155534 - 10155578
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||||  ||||| ||||||||||||||| |||||    
T  10155534 aattacactctcctccctttttaagttaaaatatacacttccctc 10155578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 13771749 - 13771793
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||| || ||| || |||||||||||||||||||||||||    
T  13771749 aattacactttcatcccctcttatgttaaaatatacactcccctc 13771793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 16960236 - 16960280
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  16960236 aattacacttccctcccctcttatgttaaaatatacactcccctc 16960280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 37708806 - 37708850
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||  |||| || |||||||||||||||||||||||||    
T  37708806 aattacactcctctcccctcttatgttaaaatatacactcccctc 37708850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 51268593 - 51268553
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcc 167  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  51268593 aattacactcctctcctctcttatgttaaaatatacactcc 51268553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 794794 - 794747
Alignment:
Q  124 tttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||    
T  794794 tttaattacactctcctcccctcttatgttaaaatatacactcccctc 794747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 8061056 - 8061099
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccct 170  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  8061056 aattacactctcctcctctcttatgttaaaatatacactcccct 8061099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 27225692 - 27225756
Alignment:
Q  113 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||  ||| |||||||||||||||| || ||||||||||||||||||| ||||| |||||    
T  27225692 ctaagagatgcttgaattacactctcctcccctcttatgttaaaatatacacttccctcccttga 27225756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 51362530 - 51362486
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||    
T  51362530 aattacactttcctccccttttatgttaaaatatacactcccctc 51362486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 16536402 - 16536452
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| |||||    
T  16536402 aattacactcccctcccctcttatgttaaaatatacactcccctcccttga 16536452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 18406560 - 18406610
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||| |||||    
T  18406560 aattacactcccctcctctcttatgttaaaatatacactaccctcccttga 18406610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 19071742 - 19071783
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  19071742 aattacactctcctcccctcttatgttaaaatatacactccc 19071783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 19119632 - 19119673
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  19119632 aattacactctcctcccctcttatgttaaaatatacactccc 19119673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 9091067 - 9091111
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||    
T  9091067 aattacattcccctccccttttatgttaaaatatacactcccctc 9091111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 18407245 - 18407201
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||||||||||||||||| |||||||    
T  18407245 aattacactctcctcccctcttatgttaaaatatacattcccctc 18407201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 19072402 - 19072358
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||    
T  19072402 aattacactcccctcctctcttatattaaaatatacactcccctc 19072358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 19120292 - 19120248
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||    
T  19120292 aattacactcccctcctctcttatattaaaatatacactcccctc 19120248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 41321543 - 41321587
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||| |||||||||||||||||||||    
T  41321543 aattacactctcctcccctcttaagttaaaatatacactcccctc 41321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 41575886 - 41575842
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  41575886 aattacactctcctcccctcttatgttaaaatatacacttccctc 41575842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 41576055 - 41576011
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||| || |||||||||||||||||||||||||||| |||||    
T  41576055 aattacattcccctcctcttttatgttaaaatatacacttccctc 41576011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 42831245 - 42831201
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  42831245 aattacactcccctccgctcttatgttaaaatatacactcccctc 42831201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 45738030 - 45738074
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  45738030 aattacactctcctcccctcttatgttaaaatatacacttccctc 45738074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 1114962 - 1114888
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||||| |||  ||| ||||||||||   || |||||||||| ||||| || |||||||||||||||||||    
T  1114962 gagtaaattatactaccttcttctaagagatgtttgaattacactcccctcccctcttatgttaaaatatacact 1114888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 9998056 - 9997998
Alignment:
Q  113 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||| ||| |||||| ||  ||||| || |||||||||||||||||||||||||    
T  9998056 ctaagagaagcttgaattacccttccctcccctcttatgttaaaatatacactcccctc 9997998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 29344551 - 29344589
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||||||||||| || |||||||||||||||||||    
T  29344551 aattacactctcctcccctcttatgttaaaatatacact 29344589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 171
Target Start/End: Complemental strand, 31766032 - 31766002
Alignment:
Q  141 cctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||||||||||||||||||    
T  31766032 cctcttttatgttaaaatatacactcccctc 31766002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 43320621 - 43320571
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| |||||||||||||||||| ||| ||||| |||||    
T  43320621 aattacactcccctccccttttatgttaaaatatagacttccctcccttga 43320571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 44645291 - 44645329
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  44645291 aattacactctcatcctctcttatgttaaaatatacact 44645329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 45737335 - 45737385
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || |||||||||||||||||||| |||| |||||    
T  45737335 aattacactcccctcccctcttatgttaaaatatacactctcctcccttga 45737385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 47553169 - 47553211
Alignment:
Q  129 ttacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||| || ||||||||||||||||| |||||||    
T  47553169 ttacactctcctcccctcttatgttaaaatatacattcccctc 47553211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 50143415 - 50143465
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||| ||||||| |||||    
T  50143415 aattacactcccctcccctcttatgttaaaatatacattcccctcccttga 50143465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 4007583 - 4007620
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacac 164  Q
    |||||||||||||||| || ||||||||||||||||||    
T  4007583 aattacactctcctcccctcttatgttaaaatatacac 4007620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 47233794 - 47233717
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||||||||   |||| |||||||  ||| ||||||| || ||| |||| ||||||||||||||||| ||||    
T  47233794 gagtaaattacactccacttttttaagagatgcttgaattacattccccttctctcttatgttaaaatatacattccc 47233717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 50144132 - 50144051
Alignment:
Q  90 tgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||||| |   || | |||  ||| |||||||||||| ||| || |||||||||||||||||||| ||||    
T  50144132 tgagtaaattacactctcctcccctcaaagatacttgaattacactctcatcccctcttatgttaaaatatacactctcctc 50144051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 11916481 - 11916525
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||    
T  11916481 aattacactcccctcctttattatgttaaaatatacacttccctc 11916525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 11917162 - 11917126
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatataca 163  Q
    ||||||||||||||||| || ||||||||||||||||    
T  11917162 aattacactctcctcctattctatgttaaaatataca 11917126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 29510522 - 29510478
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||| | || |||||||||||||||||||||||||    
T  29510522 aattacactccccttccctcttatgttaaaatatacactcccctc 29510478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 38011897 - 38011853
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  38011897 aattacactcccctccactcttaagttaaaatatacactcccctc 38011853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 43319946 - 43319990
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||  |||||||||||||||||||| |||||||    
T  43319946 aattacactcccctctccttttatgttaaaatatacattcccctc 43319990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 43504502 - 43504462
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcc 167  Q
    ||||| |||||||||| || |||||||||||||||||||||    
T  43504502 aattatactctcctcccctcttatgttaaaatatacactcc 43504462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 44500122 - 44500036
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||||||||| ||  || | |||  ||| |||||||||| ||||| || ||||||||||||||||||| |||||||||||    
T  44500122 gagtaaattacactctccttccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacacttccctctcttga 44500036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 1262430 - 1262480
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || |||||||||||||||||||| ||||||||||    
T  1262430 aattacactcccctcccctcttatgttaaaatatacactctcctctcttga 1262480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 18364663 - 18364713
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| |||||    
T  18364663 aattacactcccctcccctcttatgttaaaatatacactcccctcccttga 18364713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 30605389 - 30605339
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||||| |||||||||||    
T  30605389 aattacactcccctccactcttatgttaaaatatacacttccctctcttga 30605339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 54605795 - 54605845
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| |||||    
T  54605795 aattacactcccctcccctcttatgttaaaatatacactcccctcccttga 54605845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 11345402 - 11345353
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttg 176  Q
    |||||||||| ||||| || ||||||||||||||||||||||||| ||||    
T  11345402 aattacactcccctcccctcttatgttaaaatatacactcccctcccttg 11345353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 49765172 - 49765083
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttgacgggtagaatgcatactctccttacctataagacacttg 216  Q
    |||||||||| ||||| || ||||||||||||||||| ||||||| |||||  |||| |||  |||||| |||  ||||||||| |||||    
T  49765172 aattacactcccctcccctcttatgttaaaatatacattcccctcccttgaaaggtaaaatttatactcccctcccctataagatacttg 49765083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 18365324 - 18365280
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  18365324 aattacactcccctcccctcttatgttaaaatatacactcccctc 18365280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 22518639 - 22518579
Alignment:
Q  111 ttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||| |||||||||   |||| || ||||||||||||||||||| |||||    
T  22518639 ttctaagagaatcttgaattacacttctctcccctcttatgttaaaatatacacttccctc 22518579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 32737214 - 32737170
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||| |||||| |||||| |||||||||||||||||||||    
T  32737214 aattacactttcctccccttttaagttaaaatatacactcccctc 32737170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 45241234 - 45241278
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||    
T  45241234 aattacactcccctcctctcttatgttaaaatatacactctcctc 45241278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 49080688 - 49080608
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||||| |  ||| | |||  ||| ||||||| || ||||| || |||||||||||||||||||||||||    
T  49080688 gagtaaattacactctcctcctctcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacactcccctc 49080608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 2756650 - 2756607
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccct 170  Q
    |||||||||| ||||| || ||||||||||||||||||||||||    
T  2756650 aattacactcccctcccctcttatgttaaaatatacactcccct 2756607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 5963051 - 5963134
Alignment:
Q  88 aatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||||||| ||  || | | || ||| |||| |||||  |||| || |||||||||||||||||||||||||    
T  5963051 aatgagtaaattacactctccttccctgacacaagcttgaattgcactcctctcccctcttatgttaaaatatacactcccctc 5963134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 11397584 - 11397659
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactc 166  Q
    ||||||||||||||  |||   ||||||||| ||| |||||||||  ||||| || ||||||||||||||||||||    
T  11397584 gagtaaattacacttccttcccctaagagaagcttgaattacacttccctcccctcttatgttaaaatatacactc 11397659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 27255318 - 27255357
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactc 166  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  27255318 aattacactctcctcccctcttatgttaaaatatacactc 27255357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 3090461 - 3090411
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||| ||||| ||||| || ||||||||||||||||||||||||| |||||    
T  3090461 aattgcactcccctcccctcttatgttaaaatatacactcccctcccttga 3090411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 9830271 - 9830357
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| |||| |||   |||| |||| ||| ||||||||| || ||| || ||| ||||||||||||||||||||| |||||    
T  9830271 gagtaaattatactcccttcccctaaaagaagcttgaattacactttcatcccctcttaagttaaaatatacactcccctcccttga 9830357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 17765005 - 17764955
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||| |||| ||||| || ||||||||||||||||||||||||| |||||    
T  17765005 aattaaactcccctcccctcttatgttaaaatatacactcccctcccttga 17764955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 19066325 - 19066275
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||| |||| ||||| || ||||||||||||||||||||||||| |||||    
T  19066325 aattaaactcccctcccctcttatgttaaaatatacactcccctcccttga 19066275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 25259981 - 25259947
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatata 161  Q
    |||||||||| ||||||||||||||||||||||||    
T  25259981 aattacactcccctcctcttttatgttaaaatata 25259947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 33115313 - 33115239
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||||||||||| | |||| | |||  ||| |||||||||  ||||| || |||||||||||||||||||    
T  33115313 gagtaaattacactctcctcttctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacact 33115239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 33979324 - 33979290
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatata 161  Q
    ||||| |||||||||||||||||||||||||||||    
T  33979324 aattatactctcctcctcttttatgttaaaatata 33979290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 41587354 - 41587304
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||  |||| || ||||||||||||||||||||||||| |||||    
T  41587354 aattacactcctctcccctcttatgttaaaatatacactcccctcccttga 41587304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 53490774 - 53490724
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||||  || |||| ||||||||||||||||||||||||| |||||    
T  53490774 aattacactcatcttctctcttatgttaaaatatacactcccctcccttga 53490724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 54403592 - 54403642
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || ||||||||||||||||||| ||||| |||||    
T  54403592 aattacactcccctcccctcttatgttaaaatatacacttccctcccttga 54403642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 4757028 - 4757069
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||||||||| || ||| ||||||||||||||||||    
T  4757028 aattacactctcctcccctcttaagttaaaatatacactccc 4757069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 16067257 - 16067298
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    |||||||||||||||| || ||||||||||||||||| ||||    
T  16067257 aattacactctcctcccctcttatgttaaaatatacattccc 16067298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 19547073 - 19547032
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactccc 168  Q
    ||||||||| | ||||||| ||||||||||||||||||||||    
T  19547073 aattacactattctcctctcttatgttaaaatatacactccc 19547032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 40036439 - 40036390
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttg 176  Q
    ||||||| || ||||| || ||||||||||||||||||||||||| ||||    
T  40036439 aattacattcccctcccctcttatgttaaaatatacactcccctcccttg 40036390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 291826 - 291782
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||| ||||||| || ||||||| |||||||||||||||||    
T  291826 aattacaccctcctcccctcttatgttcaaatatacactcccctc 291782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 1364131 - 1364051
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||||||||| ||| |||| | |||   || |||||||||| | ||  || |||||||||||||||||||||||||    
T  1364131 gagtaaattacactcccttcttctcaaagatgtttgaattacactcccatctcctcttatgttaaaatatacactcccctc 1364051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 1763676 - 1763720
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||| ||||||  |||||||||||||||||||||| ||||    
T  1763676 aattacactttcctccctttttatgttaaaatatacactctcctc 1763720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 3089783 - 3089827
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  3089783 aattacacttccctcccctcttatgttaaaatatacactcccctc 3089827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 4558065 - 4558109
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  4558065 aattacactcccctcccctcttaagttaaaatatacactcccctc 4558109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 4757117 - 4757169
Alignment:
Q  113 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||| ||| ||||||| |||||||| || |||||||||||| ||||||    
T  4757117 ctaagagaagcttgaattacattctcctccactcttatgttaaaatctacact 4757169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 10887743 - 10887787
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  10887743 aattacactcccctcccctcttaagttaaaatatacactcccctc 10887787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 11055824 - 11055868
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  11055824 aattacactcccctcccctcttaagttaaaatatacactcccctc 11055868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 11389027 - 11388975
Alignment:
Q  113 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||| ||| ||||||| |||||||| || |||||||||||| ||||||    
T  11389027 ctaagagaagcttgaattacattctcctcccctcttatgttaaaatctacact 11388975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 11581989 - 11582041
Alignment:
Q  113 ctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    ||||||||| ||| ||||||| || |||||||| |||||||||||| ||||||    
T  11581989 ctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacact 11582041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 22129720 - 22129764
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  22129720 aattacactcccctcccctcttaagttaaaatatacactcccctc 22129764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 23309663 - 23309619
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| |||||||| |||  ||||||||||||||||||||    
T  23309663 aattacactcccctcctctcttaacttaaaatatacactcccctc 23309619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 27638508 - 27638552
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||  |||||||||||||||||||||||| | |||||||    
T  27638508 aattacacttccctcctcttttatgttaaaatatatattcccctc 27638552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 37183111 - 37183155
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  37183111 aattacactcccctcccctcttaagttaaaatatacactcccctc 37183155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 40927526 - 40927570
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  40927526 aattacacttccctcccctcttatgttaaaatatacactcccctc 40927570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 40974069 - 40974113
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||||||||||||||||| |||||||    
T  40974069 aattacactcccctcccctcttatgttaaaatatacaatcccctc 40974113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 54606467 - 54606423
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||  || |||||||||||||||||||||||||    
T  54606467 aattacactcccctctcctcttatgttaaaatatacactcccctc 54606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 55205004 - 55204968
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatataca 163  Q
    |||||||||| | ||||||||||||||||||||||||    
T  55205004 aattacactcacatcctcttttatgttaaaatataca 55204968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 31397 - 31353
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||    
T  31397 aattacactttcctccccttttatgttaaaatatacactcccctc 31353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 25901 - 25980
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccct 170  Q
    ||||||||||||||| | | | ||||||||| ||| ||||||||||| |||   | ||||||||||||||||||||||||    
T  25901 gagtaaattacactcccctctcctaagagaagcttgaattacactctactctcatcttatgttaaaatatacactcccct 25980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 11320 - 11370
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    ||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  11320 aattacactttcctcccctcttatgttaaaatatacactcccctcccttga 11370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 11673 - 11623
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || |||||||||| ||||||||||||||||||||    
T  11673 aattacactcacctcccctcttatgttaaattatacactcccctctcttga 11623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 11301 - 11257
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  11301 aattacactcccctccgctcttatgttaaaatatacactcccctc 11257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 3439 - 3483
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||| ||||||| || |||||||||||||||||||||||||    
T  3439 aattacacactcctcccctcttatgttaaaatatacactcccctc 3483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 421178 - 421222
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || |||||||||||||||||||||||||    
T  421178 aattacactcccctcccctcttatgttaaaatatacactcccctc 421222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 12903 - 12860
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccct 170  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||    
T  12903 aattacactctcttcctctcttatgttaaaatatacattcccct 12860  T

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Target: scaffold0695 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 2254 - 2304
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctctcttga 177  Q
    |||||||||| ||||| || |||||||||||| |||||||||||| |||||    
T  2254 aattacactcccctcccctcttatgttaaaatttacactcccctcccttga 2304  T

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Target: scaffold0695; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 2969 - 2889
Alignment:
Q  91 gagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||||||||||||   || | |||  ||| ||||||||||  ||| ||| ||| |||||||||||||||||||||    
T  2969 gagtaaattacactctcttccccttaaagatgcttaaattacactcctctcatctcttaagttaaaatatacactcccctc 2889  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 67707 - 67784
Alignment:
Q  88 aatgagtaaattacactctctttttctaagagaatctttaattacactctcctcctcttttatgttaaaatatacact 165  Q
    |||||| ||||||||||| | ||  ||||||||| | | |||||||||| ||||| || ||||| |||||||||||||    
T  67707 aatgagaaaattacactccccttccctaagagaaacatgaattacactcccctcccctcttatgataaaatatacact 67784  T

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Target: scaffold2113 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 757 - 801
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  757 aattacactcccctccactcttaagttaaaatatacactcccctc 801  T

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Target: scaffold0105 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 19690 - 19646
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    |||||||||| ||||| || ||| |||||||||||||||||||||    
T  19690 aattacactcccctcccctcttaagttaaaatatacactcccctc 19646  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 161288 - 161332
Alignment:
Q  127 aattacactctcctcctcttttatgttaaaatatacactcccctc 171  Q
    ||||||||| | |||| || |||||||||||||||||||||||||    
T  161288 aattacacttttctcccctcttatgttaaaatatacactcccctc 161332  T

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