View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6875A_low_203 (Length: 248)
Name: NF6875A_low_203
Description: NF6875A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6875A_low_203 |
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Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 34092829 - 34093069
Alignment:
| Q |
1 |
gattaggacttttctcaatgagaaactttgccaaagtcagattgatattgaataattggctaaacaaatctcacattatatatacacaaccacttgaaat |
100 |
Q |
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| T |
34092829 |
gattaggacttttctcaataagaaactttgccaaagtcagattgatattgaataattggcaaaacaaatctcacattatatatacacaaccacttgaaat |
34092928 |
T |
|
| Q |
101 |
aaaagaaacaattacattgtatgcaaatcattatcgttggctattagagcatatattaattcaaagatgaaaaagacattggtagctagaaaaatgaaga |
200 |
Q |
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| T |
34092929 |
aaaagaaacaattacattgtatgcaaatcattatcgttggctattagagcatatattaattcaaagatgaaaaagacattggtagctagaaaaatgaaga |
34093028 |
T |
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| Q |
201 |
agaggcattaggttaggtatatgtgatgatgtccatctcat |
241 |
Q |
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| T |
34093029 |
agaggcattaggttaggtaaatgtgatgatgtccacctcat |
34093069 |
T |
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