View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6875A_low_206 (Length: 247)

Name: NF6875A_low_206
Description: NF6875A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6875A_low_206
NF6875A_low_206
[»] chr4 (39 HSPs)
chr4 (11-236)||(25091540-25091765)
chr4 (11-236)||(10356376-10356601)
chr4 (11-236)||(53630414-53630639)
chr4 (11-236)||(42875684-42875909)
chr4 (11-236)||(19610211-19610436)
chr4 (71-241)||(11425825-11425995)
chr4 (70-236)||(15115109-15115275)
chr4 (11-236)||(16998412-16998637)
chr4 (70-232)||(37019561-37019723)
chr4 (75-236)||(6633541-6633701)
chr4 (75-236)||(46001535-46001695)
chr4 (70-191)||(9924085-9924207)
chr4 (60-152)||(15613061-15613153)
chr4 (63-162)||(21156-21256)
chr4 (70-188)||(14549695-14549813)
chr4 (70-184)||(19434558-19434672)
chr4 (63-152)||(51993532-51993621)
chr4 (11-123)||(9639010-9639122)
chr4 (11-123)||(25513851-25513963)
chr4 (11-101)||(40230328-40230418)
chr4 (11-123)||(10694185-10694297)
chr4 (11-123)||(10907951-10908063)
chr4 (70-189)||(11478652-11478772)
chr4 (11-123)||(12424230-12424342)
chr4 (11-101)||(19022366-19022456)
chr4 (66-123)||(2424382-2424439)
chr4 (70-193)||(9870443-9870568)
chr4 (158-224)||(26921708-26921774)
chr4 (11-101)||(44023547-44023633)
chr4 (63-162)||(21062601-21062701)
chr4 (71-123)||(35811376-35811428)
chr4 (63-121)||(32466186-32466244)
chr4 (70-127)||(14186955-14187011)
chr4 (70-123)||(15008963-15009016)
chr4 (70-123)||(16296938-16296991)
chr4 (70-123)||(40620532-40620585)
chr4 (63-119)||(13847205-13847261)
chr4 (66-108)||(14186067-14186109)
chr4 (70-123)||(14631135-14631188)
[»] chr1 (35 HSPs)
chr1 (11-236)||(19676598-19676823)
chr1 (14-236)||(21045992-21046214)
chr1 (70-236)||(42912936-42913102)
chr1 (11-236)||(20633571-20633799)
chr1 (44-236)||(16058287-16058478)
chr1 (70-231)||(51324396-51324557)
chr1 (70-195)||(24723350-24723475)
chr1 (70-175)||(13302849-13302955)
chr1 (63-162)||(42697744-42697844)
chr1 (70-232)||(21168825-21168986)
chr1 (70-195)||(7051921-7052046)
chr1 (70-161)||(4595852-4595944)
chr1 (70-193)||(7320593-7320716)
chr1 (11-123)||(28476674-28476786)
chr1 (70-152)||(21239048-21239130)
chr1 (70-123)||(12327742-12327795)
chr1 (70-123)||(51336479-51336532)
chr1 (11-123)||(12710867-12710979)
chr1 (63-162)||(45755480-45755580)
chr1 (14-193)||(22350646-22350820)
chr1 (11-101)||(41225394-41225484)
chr1 (11-101)||(41226647-41226737)
chr1 (70-123)||(29763631-29763684)
chr1 (70-123)||(46197744-46197797)
chr1 (75-141)||(45499374-45499439)
chr1 (58-123)||(8275976-8276041)
chr1 (70-123)||(50001476-50001529)
chr1 (13-61)||(20588700-20588748)
chr1 (13-61)||(20593238-20593286)
chr1 (140-195)||(44822090-44822145)
chr1 (70-119)||(635003-635052)
chr1 (70-123)||(17901793-17901846)
chr1 (70-123)||(50544872-50544925)
chr1 (71-123)||(22145666-22145718)
chr1 (67-107)||(24727383-24727423)
[»] chr7 (67 HSPs)
chr7 (11-236)||(12465200-12465425)
chr7 (11-236)||(8851099-8851324)
chr7 (11-236)||(12322870-12323095)
chr7 (11-236)||(12372161-12372386)
chr7 (11-236)||(32433529-32433754)
chr7 (17-236)||(13147418-13147637)
chr7 (11-236)||(11067355-11067580)
chr7 (70-236)||(14180397-14180563)
chr7 (11-236)||(16999320-16999548)
chr7 (63-236)||(20214034-20214207)
chr7 (71-236)||(20620173-20620338)
chr7 (17-236)||(46386038-46386253)
chr7 (32-236)||(12127124-12127328)
chr7 (70-236)||(20586239-20586405)
chr7 (75-236)||(10277215-10277375)
chr7 (11-195)||(47974760-47974944)
chr7 (70-236)||(24269946-24270112)
chr7 (11-175)||(12754553-12754716)
chr7 (11-123)||(32160140-32160252)
chr7 (70-183)||(14218894-14219008)
chr7 (11-119)||(8488034-8488142)
chr7 (11-119)||(8513693-8513801)
chr7 (63-183)||(35771433-35771554)
chr7 (16-83)||(16214514-16214581)
chr7 (12-123)||(43276685-43276796)
chr7 (12-101)||(15119248-15119337)
chr7 (56-183)||(4071759-4071887)
chr7 (70-193)||(15095636-15095759)
chr7 (70-193)||(48807324-48807448)
chr7 (70-193)||(8135237-8135359)
chr7 (12-123)||(19283056-19283167)
chr7 (66-231)||(33002053-33002210)
chr7 (63-152)||(10658843-10658932)
chr7 (75-200)||(25943041-25943166)
chr7 (32-133)||(44374833-44374934)
chr7 (32-133)||(44383698-44383799)
chr7 (70-193)||(15140143-15140266)
chr7 (56-175)||(15289052-15289172)
chr7 (11-123)||(19195611-19195725)
chr7 (66-123)||(4690658-4690715)
chr7 (71-170)||(16078282-16078382)
chr7 (56-123)||(18955330-18955397)
chr7 (11-101)||(58353-58443)
chr7 (70-192)||(15623950-15624071)
chr7 (70-193)||(13698637-13698761)
chr7 (56-152)||(36704556-36704652)
chr7 (56-123)||(18990847-18990914)
chr7 (75-141)||(13744662-13744728)
chr7 (12-117)||(18074588-18074693)
chr7 (113-193)||(13132363-13132443)
chr7 (70-191)||(12557853-12557974)
chr7 (11-61)||(14160796-14160846)
chr7 (70-123)||(29052181-29052234)
chr7 (56-193)||(11054642-11054780)
chr7 (193-236)||(25942358-25942401)
chr7 (70-123)||(3287744-3287797)
chr7 (70-123)||(16250221-16250274)
chr7 (70-123)||(16550004-16550057)
chr7 (70-123)||(16615605-16615658)
chr7 (66-123)||(43745656-43745713)
chr7 (70-123)||(18874664-18874717)
chr7 (70-123)||(20252181-20252234)
chr7 (70-123)||(38299748-38299801)
chr7 (66-119)||(48212722-48212775)
chr7 (72-143)||(14928290-14928362)
chr7 (72-143)||(15351756-15351828)
chr7 (111-191)||(41284963-41285043)
[»] chr6 (32 HSPs)
chr6 (11-236)||(7827859-7828084)
chr6 (11-236)||(19655171-19655396)
chr6 (11-236)||(23150227-23150452)
chr6 (70-236)||(15890711-15890877)
chr6 (11-236)||(18703451-18703680)
chr6 (11-236)||(18709386-18709615)
chr6 (12-236)||(27125419-27125642)
chr6 (70-221)||(27329980-27330131)
chr6 (70-221)||(27390720-27390871)
chr6 (72-162)||(24267810-24267900)
chr6 (70-232)||(19235015-19235176)
chr6 (74-195)||(18585733-18585854)
chr6 (70-231)||(28948466-28948628)
chr6 (11-101)||(31734729-31734819)
chr6 (70-232)||(30673401-30673556)
chr6 (70-189)||(18928614-18928734)
chr6 (63-123)||(15998889-15998949)
chr6 (164-232)||(19167930-19167998)
chr6 (71-146)||(27572122-27572198)
chr6 (56-152)||(31731889-31731986)
chr6 (63-123)||(12041612-12041672)
chr6 (11-123)||(20410452-20410564)
chr6 (60-152)||(24550157-24550249)
chr6 (71-189)||(19401028-19401146)
chr6 (11-61)||(17318106-17318156)
chr6 (70-141)||(19167852-19167923)
chr6 (70-123)||(15173452-15173505)
chr6 (70-123)||(15900653-15900706)
chr6 (70-193)||(23501601-23501725)
chr6 (75-115)||(29625191-29625231)
chr6 (65-123)||(23658089-23658147)
chr6 (66-123)||(21683070-21683127)
[»] chr3 (51 HSPs)
chr3 (11-236)||(17047013-17047238)
chr3 (11-236)||(17044853-17045078)
chr3 (11-224)||(22306523-22306736)
chr3 (17-236)||(11259318-11259537)
chr3 (11-236)||(40812720-40812941)
chr3 (12-236)||(17538993-17539217)
chr3 (70-236)||(40807883-40808049)
chr3 (70-245)||(49900608-49900783)
chr3 (11-236)||(17693954-17694179)
chr3 (70-236)||(17518872-17519038)
chr3 (70-236)||(17533734-17533900)
chr3 (11-236)||(15931448-15931672)
chr3 (11-234)||(41172311-41172534)
chr3 (70-236)||(44274305-44274471)
chr3 (11-236)||(35354489-35354714)
chr3 (86-236)||(50348041-50348191)
chr3 (75-236)||(10311415-10311575)
chr3 (70-236)||(10563596-10563761)
chr3 (11-220)||(14508749-14508959)
chr3 (11-134)||(17541423-17541546)
chr3 (70-231)||(19568207-19568368)
chr3 (11-123)||(14152339-14152451)
chr3 (70-191)||(33565018-33565140)
chr3 (96-188)||(35064566-35064658)
chr3 (56-175)||(16050875-16050994)
chr3 (70-231)||(9510915-9511076)
chr3 (70-231)||(9518890-9519051)
chr3 (70-193)||(11563654-11563778)
chr3 (172-236)||(35064681-35064745)
chr3 (178-236)||(5200277-5200335)
chr3 (70-193)||(42323970-42324094)
chr3 (70-191)||(35960927-35961049)
chr3 (56-152)||(11885542-11885639)
chr3 (71-193)||(49968859-49968981)
chr3 (67-152)||(12509346-12509431)
chr3 (70-183)||(13185834-13185948)
chr3 (70-123)||(15446867-15446920)
chr3 (70-123)||(15566744-15566797)
chr3 (70-175)||(24177735-24177840)
chr3 (11-193)||(45530544-45530725)
chr3 (88-193)||(37038978-37039085)
chr3 (70-112)||(5200242-5200284)
chr3 (11-56)||(17325561-17325606)
chr3 (70-139)||(36528851-36528920)
chr3 (14-101)||(50350759-50350846)
chr3 (70-123)||(16979912-16979965)
chr3 (70-123)||(17208524-17208577)
chr3 (71-123)||(22652773-22652825)
chr3 (72-170)||(22758835-22758933)
chr3 (74-152)||(14250085-14250163)
chr3 (32-92)||(50347596-50347656)
[»] scaffold0737 (2 HSPs)
scaffold0737 (11-236)||(4654-4879)
scaffold0737 (75-123)||(5821-5869)
[»] scaffold0407 (1 HSPs)
scaffold0407 (11-236)||(11215-11439)
[»] scaffold0064 (1 HSPs)
scaffold0064 (11-236)||(58633-58858)
[»] scaffold0001 (3 HSPs)
scaffold0001 (11-236)||(31881-32106)
scaffold0001 (11-236)||(37188-37413)
scaffold0001 (11-236)||(77574-77799)
[»] chr2 (42 HSPs)
chr2 (14-236)||(24780783-24781005)
chr2 (11-236)||(24436535-24436760)
chr2 (14-239)||(5031072-5031297)
chr2 (11-236)||(9975816-9976041)
chr2 (70-236)||(17307373-17307539)
chr2 (70-236)||(24516073-24516239)
chr2 (11-223)||(22251388-22251600)
chr2 (70-236)||(40912207-40912373)
chr2 (66-236)||(19201195-19201365)
chr2 (11-236)||(2523687-2523912)
chr2 (75-236)||(37270587-37270747)
chr2 (108-236)||(27484514-27484642)
chr2 (119-236)||(36841151-36841268)
chr2 (11-185)||(27852605-27852776)
chr2 (70-193)||(25142133-25142257)
chr2 (73-195)||(1383545-1383667)
chr2 (70-195)||(357809-357934)
chr2 (70-193)||(3539766-3539890)
chr2 (63-170)||(25046070-25046178)
chr2 (15-101)||(24718041-24718127)
chr2 (44-195)||(22501897-22502050)
chr2 (44-195)||(22509831-22509984)
chr2 (58-162)||(44072518-44072622)
chr2 (63-162)||(5986137-5986237)
chr2 (11-123)||(21369293-21369405)
chr2 (12-101)||(14179669-14179758)
chr2 (70-188)||(22259974-22260091)
chr2 (11-61)||(36841289-36841339)
chr2 (63-152)||(14694296-14694386)
chr2 (11-61)||(31521231-31521281)
chr2 (70-123)||(21080968-21081021)
chr2 (70-123)||(21915624-21915677)
chr2 (70-123)||(25184189-25184242)
chr2 (63-193)||(19358820-19358951)
chr2 (11-61)||(20916369-20916419)
chr2 (140-194)||(24884399-24884453)
chr2 (86-183)||(18390229-18390326)
chr2 (70-123)||(21315475-21315528)
chr2 (70-123)||(21335265-21335318)
chr2 (66-123)||(23610626-23610683)
chr2 (79-123)||(18357975-18358019)
chr2 (70-193)||(18388189-18388312)
[»] scaffold1283 (1 HSPs)
scaffold1283 (11-236)||(408-633)
[»] chr8 (49 HSPs)
chr8 (13-236)||(42817849-42818072)
chr8 (17-229)||(19140659-19140870)
chr8 (71-245)||(20083638-20083812)
chr8 (66-236)||(5761421-5761590)
chr8 (85-236)||(5082226-5082377)
chr8 (75-236)||(6573060-6573221)
chr8 (11-236)||(39935947-39936175)
chr8 (75-236)||(6202664-6202824)
chr8 (70-236)||(6101752-6101918)
chr8 (75-236)||(37292593-37292753)
chr8 (135-245)||(20178593-20178704)
chr8 (70-225)||(20397509-20397656)
chr8 (12-123)||(18761448-18761559)
chr8 (70-231)||(22532131-22532292)
chr8 (70-231)||(22536816-22536977)
chr8 (70-193)||(45469218-45469342)
chr8 (56-151)||(17906834-17906929)
chr8 (70-239)||(31722492-31722661)
chr8 (66-231)||(39694272-39694437)
chr8 (56-138)||(23889784-23889866)
chr8 (11-101)||(36306019-36306109)
chr8 (66-123)||(4380612-4380669)
chr8 (63-162)||(19700121-19700221)
chr8 (70-161)||(20022039-20022131)
chr8 (70-152)||(36727037-36727120)
chr8 (11-101)||(21579146-21579236)
chr8 (56-152)||(23899972-23900069)
chr8 (56-147)||(22254741-22254833)
chr8 (70-193)||(22317910-22318033)
chr8 (63-138)||(22583652-22583727)
chr8 (67-152)||(23419411-23419497)
chr8 (14-118)||(22258249-22258353)
chr8 (11-111)||(23943766-23943866)
chr8 (63-152)||(23948233-23948323)
chr8 (75-141)||(36305837-36305903)
chr8 (70-123)||(26454708-26454761)
chr8 (66-123)||(36732407-36732464)
chr8 (70-108)||(17158962-17159000)
chr8 (70-108)||(23479097-23479135)
chr8 (71-175)||(17218649-17218754)
chr8 (12-101)||(18834444-18834533)
chr8 (70-107)||(19880838-19880875)
chr8 (75-115)||(34758875-34758915)
chr8 (32-123)||(22208269-22208360)
chr8 (11-61)||(29762808-29762858)
chr8 (70-123)||(12577880-12577932)
chr8 (70-119)||(22610266-22610315)
chr8 (70-123)||(25657513-25657566)
chr8 (121-193)||(42265559-42265631)
[»] scaffold1633 (1 HSPs)
scaffold1633 (12-236)||(1092-1316)
[»] scaffold0077 (2 HSPs)
scaffold0077 (12-236)||(34226-34450)
scaffold0077 (64-152)||(5921-6009)
[»] scaffold1941 (1 HSPs)
scaffold1941 (70-236)||(25-191)
[»] scaffold0334 (1 HSPs)
scaffold0334 (70-236)||(405-571)
[»] scaffold0080 (2 HSPs)
scaffold0080 (16-236)||(21738-21958)
scaffold0080 (11-61)||(58827-58877)
[»] scaffold0241 (2 HSPs)
scaffold0241 (70-236)||(3069-3235)
scaffold0241 (129-236)||(2451-2558)
[»] scaffold0020 (3 HSPs)
scaffold0020 (71-236)||(143498-143663)
scaffold0020 (64-236)||(168992-169164)
scaffold0020 (11-101)||(174243-174333)
[»] scaffold1766 (1 HSPs)
scaffold1766 (64-236)||(689-861)
[»] scaffold0632 (1 HSPs)
scaffold0632 (70-236)||(1052-1218)
[»] scaffold0207 (1 HSPs)
scaffold0207 (70-236)||(13391-13557)
[»] scaffold0111 (2 HSPs)
scaffold0111 (74-236)||(5270-5432)
scaffold0111 (72-231)||(12534-12693)
[»] scaffold0026 (1 HSPs)
scaffold0026 (70-236)||(146610-146776)
[»] chr5 (27 HSPs)
chr5 (75-222)||(7484903-7485050)
chr5 (70-236)||(21300043-21300209)
chr5 (70-232)||(20566445-20566599)
chr5 (85-236)||(19921525-19921676)
chr5 (70-220)||(31622028-31622170)
chr5 (71-195)||(36508633-36508757)
chr5 (11-101)||(26762424-26762514)
chr5 (12-123)||(23199148-23199259)
chr5 (11-101)||(21398584-21398674)
chr5 (56-189)||(21617913-21618047)
chr5 (70-123)||(6551289-6551342)
chr5 (70-195)||(31456888-31457013)
chr5 (67-152)||(10954060-10954145)
chr5 (56-152)||(20469161-20469258)
chr5 (63-157)||(25249820-25249915)
chr5 (63-157)||(25313604-25313699)
chr5 (56-193)||(21405613-21405751)
chr5 (75-141)||(22111810-22111876)
chr5 (70-123)||(17011728-17011781)
chr5 (74-123)||(30616614-30616663)
chr5 (71-123)||(266038-266090)
chr5 (70-179)||(10774663-10774771)
chr5 (140-194)||(17876132-17876186)
chr5 (70-123)||(18744874-18744927)
chr5 (175-224)||(22111715-22111764)
chr5 (70-123)||(29448840-29448893)
chr5 (111-191)||(31251931-31252011)
[»] scaffold0004 (5 HSPs)
scaffold0004 (66-236)||(328283-328455)
scaffold0004 (75-224)||(75691-75834)
scaffold0004 (79-226)||(72841-72980)
scaffold0004 (75-152)||(110144-110222)
scaffold0004 (71-119)||(73091-73139)
[»] scaffold0019 (1 HSPs)
scaffold0019 (11-175)||(24071-24235)
[»] scaffold0047 (1 HSPs)
scaffold0047 (11-232)||(78955-79161)
[»] scaffold0036 (1 HSPs)
scaffold0036 (11-184)||(78125-78298)
[»] scaffold0149 (2 HSPs)
scaffold0149 (70-210)||(29572-29711)
scaffold0149 (70-195)||(21539-21664)
[»] scaffold0956 (1 HSPs)
scaffold0956 (12-158)||(2520-2666)
[»] scaffold0285 (1 HSPs)
scaffold0285 (70-232)||(19652-19806)
[»] scaffold0113 (1 HSPs)
scaffold0113 (70-197)||(35418-35543)
[»] scaffold0213 (1 HSPs)
scaffold0213 (14-123)||(19207-19316)
[»] scaffold0037 (3 HSPs)
scaffold0037 (56-231)||(112951-113127)
scaffold0037 (71-189)||(81501-81619)
scaffold0037 (56-231)||(117792-117960)
[»] scaffold0230 (1 HSPs)
scaffold0230 (74-195)||(6688-6809)
[»] scaffold0371 (2 HSPs)
scaffold0371 (11-101)||(10386-10476)
scaffold0371 (11-96)||(3901-3986)
[»] scaffold0112 (1 HSPs)
scaffold0112 (70-232)||(2787-2942)
[»] scaffold0083 (3 HSPs)
scaffold0083 (66-231)||(10750-10913)
scaffold0083 (66-146)||(5040-5120)
scaffold0083 (70-123)||(1937-1990)
[»] scaffold0395 (1 HSPs)
scaffold0395 (11-91)||(11921-12001)
[»] scaffold0174 (4 HSPs)
scaffold0174 (75-226)||(5167-5310)
scaffold0174 (75-226)||(11287-11430)
scaffold0174 (75-225)||(19605-19754)
scaffold0174 (70-123)||(5454-5507)
[»] scaffold0074 (1 HSPs)
scaffold0074 (11-104)||(1957-2050)
[»] scaffold0075 (1 HSPs)
scaffold0075 (63-162)||(60855-60955)
[»] scaffold0628 (1 HSPs)
scaffold0628 (70-239)||(1057-1226)
[»] scaffold0220 (1 HSPs)
scaffold0220 (56-152)||(19924-20021)
[»] scaffold0040 (1 HSPs)
scaffold0040 (70-195)||(106050-106175)
[»] scaffold0671 (1 HSPs)
scaffold0671 (63-170)||(4892-5000)
[»] scaffold0002 (1 HSPs)
scaffold0002 (63-170)||(398514-398622)
[»] scaffold0123 (1 HSPs)
scaffold0123 (60-193)||(7205-7340)
[»] scaffold0802 (1 HSPs)
scaffold0802 (70-191)||(4708-4830)
[»] scaffold0156 (1 HSPs)
scaffold0156 (77-195)||(16532-16650)
[»] scaffold0028 (1 HSPs)
scaffold0028 (72-193)||(3053-3174)
[»] scaffold0008 (1 HSPs)
scaffold0008 (67-192)||(135500-135625)
[»] scaffold0100 (1 HSPs)
scaffold0100 (70-222)||(26633-26779)
[»] scaffold0431 (1 HSPs)
scaffold0431 (11-123)||(5633-5745)
[»] scaffold0251 (1 HSPs)
scaffold0251 (58-188)||(20073-20202)
[»] scaffold0010 (1 HSPs)
scaffold0010 (63-162)||(126297-126395)
[»] scaffold0256 (1 HSPs)
scaffold0256 (56-141)||(1831-1917)
[»] scaffold1256 (1 HSPs)
scaffold1256 (66-123)||(2195-2252)
[»] scaffold0203 (1 HSPs)
scaffold0203 (70-123)||(17939-17992)
[»] scaffold0175 (1 HSPs)
scaffold0175 (70-193)||(8571-8695)
[»] scaffold0032 (1 HSPs)
scaffold0032 (70-123)||(61847-61900)
[»] scaffold0589 (1 HSPs)
scaffold0589 (63-162)||(4345-4445)
[»] scaffold0379 (2 HSPs)
scaffold0379 (75-188)||(10741-10846)
scaffold0379 (11-54)||(11016-11059)
[»] scaffold0162 (1 HSPs)
scaffold0162 (11-101)||(23832-23922)
[»] scaffold0516 (1 HSPs)
scaffold0516 (66-119)||(5300-5353)
[»] scaffold0071 (1 HSPs)
scaffold0071 (70-123)||(15272-15325)
[»] scaffold0041 (1 HSPs)
scaffold0041 (76-125)||(5712-5761)
[»] scaffold0065 (1 HSPs)
scaffold0065 (63-162)||(52536-52636)
[»] scaffold0056 (2 HSPs)
scaffold0056 (60-183)||(67060-67184)
scaffold0056 (66-123)||(18275-18332)
[»] scaffold0042 (1 HSPs)
scaffold0042 (63-174)||(29336-29448)
[»] scaffold0848 (1 HSPs)
scaffold0848 (71-193)||(2021-2143)
[»] scaffold0625 (1 HSPs)
scaffold0625 (56-123)||(5846-5913)
[»] scaffold0003 (1 HSPs)
scaffold0003 (70-157)||(96364-96451)
[»] scaffold0261 (1 HSPs)
scaffold0261 (158-224)||(6620-6686)
[»] scaffold0515 (1 HSPs)
scaffold0515 (70-123)||(5029-5082)
[»] scaffold0436 (1 HSPs)
scaffold0436 (70-123)||(8960-9013)
[»] scaffold0306 (1 HSPs)
scaffold0306 (70-123)||(5029-5082)
[»] scaffold0138 (2 HSPs)
scaffold0138 (70-123)||(21097-21150)
scaffold0138 (70-123)||(34112-34165)
[»] scaffold0057 (1 HSPs)
scaffold0057 (70-123)||(69852-69905)
[»] scaffold0853 (1 HSPs)
scaffold0853 (12-123)||(2396-2506)
[»] scaffold0151 (1 HSPs)
scaffold0151 (56-170)||(31062-31175)
[»] scaffold0107 (1 HSPs)
scaffold0107 (12-91)||(13493-13572)
[»] scaffold0819 (1 HSPs)
scaffold0819 (70-179)||(5311-5419)
[»] scaffold0601 (1 HSPs)
scaffold0601 (71-108)||(196-233)
[»] scaffold0034 (1 HSPs)
scaffold0034 (70-123)||(29215-29268)
[»] scaffold0017 (1 HSPs)
scaffold0017 (74-123)||(26727-26776)
[»] scaffold0439 (1 HSPs)
scaffold0439 (115-194)||(12323-12403)
[»] scaffold0125 (1 HSPs)
scaffold0125 (12-56)||(28618-28662)
[»] scaffold0859 (1 HSPs)
scaffold0859 (86-193)||(4612-4718)
[»] scaffold0676 (1 HSPs)
scaffold0676 (44-123)||(2881-2960)
[»] scaffold0205 (1 HSPs)
scaffold0205 (72-162)||(30615-30705)
[»] scaffold0414 (1 HSPs)
scaffold0414 (11-101)||(11100-11190)
[»] scaffold0058 (1 HSPs)
scaffold0058 (70-108)||(6383-6421)
[»] scaffold0046 (1 HSPs)
scaffold0046 (70-108)||(21776-21814)
[»] scaffold1186 (1 HSPs)
scaffold1186 (70-123)||(2020-2073)
[»] scaffold0577 (1 HSPs)
scaffold0577 (70-179)||(9004-9112)
[»] scaffold0462 (1 HSPs)
scaffold0462 (70-123)||(11223-11276)
[»] scaffold0061 (2 HSPs)
scaffold0061 (70-123)||(14585-14638)
scaffold0061 (70-123)||(23643-23696)
[»] scaffold0007 (1 HSPs)
scaffold0007 (70-198)||(158821-158949)
[»] scaffold0005 (1 HSPs)
scaffold0005 (70-123)||(186195-186248)
[»] scaffold0116 (1 HSPs)
scaffold0116 (121-193)||(35514-35586)


Alignment Details
Target: chr4 (Bit Score: 178; Significance: 4e-96; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 25091765 - 25091540
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  25091765 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 25091666  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  25091665 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 25091566  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  25091565 ccgttgaatttgtgtagaattgatgt 25091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 10356376 - 10356601
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||   ||||  |||||||||| || ||||||||||||||||||||||||||    
T  10356376 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaattctaagttg 10356475  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  10356476 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggtagttaatagagtagaaaat 10356575  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  10356576 ccgttgaatttgtgtagaattgatgt 10356601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 53630414 - 53630639
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||  |||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  53630414 cagagaaaagaagaatcttgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 53630513  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  53630514 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 53630613  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
     |||||||||||||||||||||||||    
T  53630614 tcgttgaatttgtgtagaattgatgt 53630639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 42875909 - 42875684
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||  ||||   |||  ||||||||||||| |||||||||| | |||||||||||||    
T  42875909 cagagaagagaagaatcttgtgagaagaggagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaactttatataattctaagttg 42875810  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||| || |||||||||||||||||| ||||||||||||||||||||    
T  42875809 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgttaatagagtagaaaat 42875710  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  42875709 ccgttgaatttgtgtagaattgatgt 42875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 19610436 - 19610211
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||| | ||||    |||  ||||||||||||| |||||||||||||||||| |||||||    
T  19610436 cagaaaagagaagaatcttgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttg 19610337  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  19610336 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgttaatagagtagaaaat 19610237  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||| ||||||||||||||||||||    
T  19610236 ccgttaaatttgtgtagaattgatgt 19610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 71 - 241
Target Start/End: Complemental strand, 11425995 - 11425825
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatta 170  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 11425896  T
Q  171 agttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatc 241  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11425895 ggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatc 11425825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 15115275 - 15115109
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  15115275 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 15115176  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15115175 attttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 15115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 16998637 - 16998412
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| || | ||||   ||||||| ||||    |||  ||||||||| ||| ||||||||||||||||||||||||||    
T  16998637 cagagaagagaagaatcttgtgagaagagaaacaattccgtagagtccgatcatctaatttaaggtaagagtgagactaactttctctaattctaagttg 16998538  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  16998537 tataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 16998438  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
     |||||||||||||||| ||||||||    
T  16998437 tcgttgaatttgtgtagtattgatgt 16998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 37019723 - 37019561
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||  |||||    
T  37019723 ctaaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgagaatt 37019624  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 232  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37019623 aggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattg 37019561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 6633541 - 6633701
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||  |||||| |||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 6633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 46001535 - 46001695
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||  |||||| |||    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 46001634  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  46001635 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 46001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 9924207 - 9924085
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| |||| || |||||| | |||    
T  9924207 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaat 9924108  T
Q  169 taagttttgaagttgtaattggt 191  Q
    || |||| |||||||||||||||    
T  9924107 taggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 15613153 - 15613061
Alignment:
Q  60 attgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||  |||| ||||||||||| |||||||    
T  15613153 attgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagtt 15613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 21256 - 21156
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    |||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||| |||    
T  21256 gattaacctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatt 21157  T
Q  162 t 162  Q
    |    
T  21156 t 21156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 14549813 - 14549695
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||| ||  |||| || || ||||||||||||| ||  ||||| ||||||    
T  14549813 ctaaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaatt 14549714  T
Q  170 aagttttgaagttgtaatt 188  Q
    | |||| ||||||||||||    
T  14549713 aggtttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 19434558 - 19434672
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| |   ||||| ||||||    
T  19434558 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatt 19434657  T
Q  170 aagttttgaagttgt 184  Q
    |||||| ||||||||    
T  19434658 aagtttagaagttgt 19434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 51993621 - 51993532
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagtt 152  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||||||||| |||||||    
T  51993621 gattaacctaaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 51993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 9639122 - 9639010
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||    ||| |||||||||||||| ||||| |||||||||||  | |||||    
T  9639122 cagagaagagaagaatcttgtgagaagaggagaaatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaataatgagttg 9639023  T
Q  111 tataattctgaaa 123  Q
    | |||||||||||    
T  9639022 tgtaattctgaaa 9639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 25513963 - 25513851
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  |||    ||| ||||||||| |||| ||||| |||||||||||  | |||||    
T  25513963 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagttg 25513864  T
Q  111 tataattctgaaa 123  Q
    |||||||||||||    
T  25513863 tataattctgaaa 25513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 40230418 - 40230328
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||    ||| |||||||||||||| |||||||||||| ||||    
T  40230418 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 10694185 - 10694297
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||| ||||    |||  ||||||||||||| |||||| |||||||||||||||||      
T  10694185 cagagaagagaagaatctcgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaa 10694284  T
Q  111 tataattctgaaa 123  Q
    | |||||||||||    
T  10694285 tttaattctgaaa 10694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 10907951 - 10908063
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||| ||||    |||  ||||||||||||| |||||| |||||||||||||||||      
T  10907951 cagagaagagaagaatctcgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaa 10908050  T
Q  111 tataattctgaaa 123  Q
    | |||||||||||    
T  10908051 tttaattctgaaa 10908063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 11478652 - 11478772
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||| |||| || ||||||| ||| |||| || |||||| | |||    
T  11478652 ctaaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaat 11478751  T
Q  169 taagttttgaagttgtaattg 189  Q
    || |||| ||| |||||||||    
T  11478752 taggtttagaacttgtaattg 11478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 12424230 - 12424342
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||    |||  ||||||||||||| ||||| |||||||||||  |  ||||    
T  12424230 cagagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttg 12424329  T
Q  111 tataattctgaaa 123  Q
    |||||||||||||    
T  12424330 tataattctgaaa 12424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 19022456 - 19022366
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| ||||    ||| ||||||||| |||| |||||||||||||||||    
T  19022456 cagagaagagaataatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 2424382 - 2424439
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  2424382 taacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaa 2424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 9870443 - 9870568
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttagg-aa 167  Q
    ||||| |||||||| |||||||||||  ||||||||||||||||||||||| ||||||  |||  |||| |||||||||||||| || |||||| || ||    
T  9870443 ctaagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaa 9870542  T
Q  168 ttaagttttgaagttgtaattggttg 193  Q
    ||| | || |||||||||||||||||    
T  9870543 ttagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 26921708 - 26921774
Alignment:
Q  158 aatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 224  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  26921708 aatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccaatgaatttgtg 26921774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 44023547 - 44023633
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| |    ||| || |||||||||||||| ||||||| |||| ||||    
T  44023547 cagagaagagaagaatcttgtgaaaagaggagcaatcttgtagagtcc----gatcaatctaaggtaagggtgcgactaaccttctttaat 44023633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 21062701 - 21062601
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||  ||||| | || ||||||  |||| || || ||||||||||||| |||| |||    
T  21062701 gattagcctaaggtaagggtgggactaactttctctaattctaagtgttataactatgaaaattggatttaacaagtggtaggttgtagttttgaggatt 21062602  T
Q  162 t 162  Q
    |    
T  21062601 t 21062601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 35811376 - 35811428
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  35811376 taaggtaagggtgggactaactttctctaattctaagtggtataattttgaaa 35811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 32466186 - 32466244
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga 121  Q
    ||||||||||||||||||||| ||||||  |||| |||||||||||||| |||||||||    
T  32466186 gattaacctaaggtaagggtgagactaatcttctttaattctaagttgtgtaattctga 32466244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 14187011 - 14186955
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattga 127  Q
    |||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||    
T  14187011 ctaaggtaagggtgggagtaactttctctaattctaag-tgtatgattctgaaattga 14186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 15009016 - 15008963
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  15009016 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 15008963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 16296991 - 16296938
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  16296991 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 16296938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 40620585 - 40620532
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| || |||||||||||||||||||||  | |||||||||||    
T  40620585 ctaaggtaagggtgggaataactttctctaattctaagtattttaattctgaaa 40620532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 13847261 - 13847205
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||||||| ||||| |||||||||||  |  |||||||||||||    
T  13847261 gattaacctaaggtaagggtgagactagctttctctaataatgggttgtataattct 13847205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 14186109 - 14186067
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagt 108  Q
    |||||||||||||||||| || ||||||||| |||||||||||    
T  14186109 taacctaaggtaagggtgggagtaactttctttaattctaagt 14186067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 14631188 - 14631135
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  14631188 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14631135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 19676823 - 19676598
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  19676823 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 19676724  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  19676723 tataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 19676624  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  19676623 ccgttgaatttgtgtagaattgatgt 19676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 21045992 - 21046214
Alignment:
Q  14 agaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtat 113  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||||    |||  ||||||||||||| |||||||||||||||||||||||||||||    
T  21045992 agaagagaagaatcttgtgagaagaggtgcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 21046091  T
Q  114 aattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccg 213  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21046092 aattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccg 21046191  T
Q  214 ttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||    
T  21046192 ttgaatttgtgtagaattgatgt 21046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 42913102 - 42912936
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||    
T  42913102 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttaggaatt 42913003  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42913002 aggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 42912936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 20633571 - 20633799
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||    |||  |||| |||||||| ||||||||| ||||||||||||||||    
T  20633571 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagttg 20633670  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtag---ttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaa 207  Q
    ||||||||||||||||| |||||||||||||||||| |||   ||||| |||||| ||||||| |||||||||||||||||||||||||||||| || ||    
T  20633671 tataattctgaaattgagtttagcatgttgtaggttatagttattatgggaatttgggaattaggttttgaagttgtaattggttgttaatagaataaaa 20633770  T
Q  208 aatccgttgaatttgtgtagaattgatgt 236  Q
    |||  ||||||||||||||||||||||||    
T  20633771 aataagttgaatttgtgtagaattgatgt 20633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 44 - 236
Target Start/End: Original strand, 16058287 - 16058478
Alignment:
Q  44 aatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtag 143  Q
    ||||||||||||| ||||    ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 16058386  T
Q  144 gttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||  ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16058387 gttgtagttatggaaatttgggaatt-aggtttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 16058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 51324557 - 51324396
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| || ||| || ||||||    
T  51324557 ctaaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattgggaatt 51324458  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    | ||||  ||||||||||||||||||   | |||||||||||  ||||||| ||||||||||    
T  51324457 aggtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtagaatt 51324396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 195
Target Start/End: Original strand, 24723350 - 24723475
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||| || || |||| |||||||| ||  |||||  |||||    
T  24723350 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgagaatt 24723449  T
Q  170 aagttttgaagttgtaattggttgtt 195  Q
    | |||| |||||||||||||||||||    
T  24723450 atgtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 13302955 - 13302849
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||||||||||||| || |||||| |||||    
T  13302955 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaat 13302856  T
Q  169 taagttt 175  Q
    || ||||    
T  13302855 taggttt 13302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 42697844 - 42697744
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||  |||| ||||||||||||||||||| |||| |||    
T  42697844 gattaacctaaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatt 42697745  T
Q  162 t 162  Q
    |    
T  42697744 t 42697744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 21168986 - 21168825
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||||||||  | ||||||||||||||| || ||||||||||||| ||||||| ||||||||||||| | ||||   | || |||||| |||||     
T  21168986 ctaaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgggaata 21168887  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 232  Q
    | |||||||| | ||  || ||| ||||||||||||||||||| ||||||||||||| |||||    
T  21168886 aggttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgtacaattg 21168825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 195
Target Start/End: Original strand, 7051921 - 7052046
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||| || ||||| |   ||||| ||||||    
T  7051921 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttgggaatt 7052020  T
Q  170 aagttttgaagttgtaattggttgtt 195  Q
    | |||| ||| |||||||||||||||    
T  7052021 aggtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 4595852 - 4595944
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||| |||| || |||| || |||||||||||||||| || |||||    
T  4595852 ctaaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttgggaatt 4595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 7320593 - 7320716
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| ||||||| | | |||||||||||| |||| ||||||||| |||| |||| || ||||||| |||||||| || |||||| |||||    
T  7320593 ctaaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaat 7320691  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || |||| || ||||||||||||||    
T  7320692 tatgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 28476674 - 28476786
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||||| || |    ||| |||||||||||||| |||||  ||||||||||  | |||||    
T  28476674 cagagaagggaagaatcttgtgagaagaggagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagttg 28476773  T
Q  111 tataattctgaaa 123  Q
    |||||||||||||    
T  28476774 tataattctgaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 152
Target Start/End: Original strand, 21239048 - 21239130
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||||||||||||    
T  21239048 ctaaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 12327742 - 12327795
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  12327742 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaa 12327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 51336532 - 51336479
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  51336532 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 51336479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 12710979 - 12710867
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||| | ||    ||| ||||||||| | || ||||| |||||||||||  |  ||||    
T  12710979 cagagaagagaagaatcttatgagaagaggagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggactagctttctctaatattgggttg 12710880  T
Q  111 tataattctgaaa 123  Q
    |||||||||||||    
T  12710879 tataattctgaaa 12710867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 45755580 - 45755480
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||||||||||||||||||| ||||||| |||| ||||| |||||| ||| |||||| ||| ||  |||| || |||||||||||||||| ||||||||    
T  45755580 gattaacctaaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttgagaatt 45755481  T
Q  162 t 162  Q
    |    
T  45755480 t 45755480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 22350820 - 22350646
Alignment:
Q  14 agaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtat 113  Q
    |||| ||||||||||| ||||| | |||||||||||||||||| ||||  ||    |||||||||||||| ||||||| |||  ||||||| |||  |||    
T  22350820 agaaaagaagaatcttatgagaga-ggagcaatcttgtagagtccgatcaat----ctaaggtaagggtgggactaaccttcaataattctgagta-tat 22350727  T
Q  114 aattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttg 193  Q
     ||||||||| |||| |||| || |||||||||||||||| || |||||| ||||||| | || ||||||| || ||||||    
T  22350726 gattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 22350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 41225394 - 41225484
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| ||||    |||  ||||||||||||| ||||||| |||| ||||    
T  41225394 cagagaagagaagaatcttgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41225484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 41226647 - 41226737
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| ||||    |||  ||||||||||||| ||||||| |||| ||||    
T  41226647 cagagaagagaagaatcttgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41226737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 29763631 - 29763684
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  29763631 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29763684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 46197744 - 46197797
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  46197744 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 46197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 45499439 - 45499374
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 141  Q
    ||||||||| || ||||| ||||||||| || ||||||||||||||||||||| |||||||| ||||    
T  45499439 gtaagggtg-gattaactctctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 8275976 - 8276041
Alignment:
Q  58 cgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||| ||||| ||||||||||||||||||||| |||| ||||||  | ||| ||||||||||||||    
T  8275976 cgatcgattatcctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaa 8276041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 50001529 - 50001476
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| |||||||||||| |||||||||||  | |||||||||||    
T  50001529 ctaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 50001476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 20588748 - 20588700
Alignment:
Q  13 gagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgat 61  Q
    ||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  20588748 gagaagagaagaatactgtgagaagaggagcaatcttgtagagtccgat 20588700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 20593286 - 20593238
Alignment:
Q  13 gagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgat 61  Q
    ||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  20593286 gagaagagaagaatactgtgagaagaggagcaatcttgtagagtccgat 20593238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 44822090 - 44822145
Alignment:
Q  140 gtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgtt 195  Q
    ||||||||||||| ||  ||||| ||||||| |||| |||||||||||||||||||    
T  44822090 gtaggttgtagttctggaaatttgggaattaggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 635003 - 635052
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||| ||||| |||||||||||  || |||||||||||||    
T  635003 ctaaggtaagggtgagactagctttctctaataataggttgtataattct 635052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 17901793 - 17901846
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  17901793 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 17901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 50544925 - 50544872
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  50544925 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 50544872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 22145666 - 22145718
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||||||||||| |||||||||||||||||  |  ||||| |||||||||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaa 22145718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 24727423 - 24727383
Alignment:
Q  67 aacctaaggtaagggtgtgactaactttctctaattctaag 107  Q
    ||||||||||||||||| ||||||| |||| ||||||||||    
T  24727423 aacctaaggtaagggtgggactaaccttctttaattctaag 24727383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 174; Significance: 1e-93; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 12465200 - 12465425
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  12465200 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 12465299  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  12465300 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 12465399  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  12465400 ccgttgaatttgtgtagaattgatgt 12465425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 8851099 - 8851324
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  8851099 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 8851198  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| |||||    
T  8851199 tataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgttaatagagtataaaat 8851298  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    | ||||||||||||||||||||||||    
T  8851299 ctgttgaatttgtgtagaattgatgt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 12322870 - 12323095
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    |||  |||||||||||||  |||||||||||||||||||||||||    
T  12322870 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagttg 12322969  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  12322970 tataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgttaatagaatagaaaat 12323069  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  12323070 ccgttgaatttgtgtagaattgatgt 12323095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 12372386 - 12372161
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  12372386 cagagaagagaagaatcttgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 12372287  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  12372286 tataattctgaaattgagtttagcatgttgcaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 12372187  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
     |||||||||||||||||||||||||    
T  12372186 tcgttgaatttgtgtagaattgatgt 12372161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 32433529 - 32433754
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  32433529 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 32433628  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  32433629 tataattctgaaattgagtttagcatgttgtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaat 32433728  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
      ||||||||||||||||| ||||||    
T  32433729 tagttgaatttgtgtagaagtgatgt 32433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 13147418 - 13147637
Alignment:
Q  17 agagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataat 116  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  13147418 agagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataat 13147517  T
Q  117 tctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttg 216  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  13147518 tctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccgttg 13147617  T
Q  217 aatttgtgtagaattgatgt 236  Q
    ||||||||||||| ||||||    
T  13147618 aatttgtgtagaagtgatgt 13147637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 11067580 - 11067355
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  11067580 cagagaagagaagaatattgtgagaagaggagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 11067481  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||| || ||||||||||||||||||||||||||||    
T  11067480 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgttaatagagtagaaaat 11067381  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
     ||||||||||||| |||| ||||||    
T  11067380 tcgttgaatttgtggagaagtgatgt 11067355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 14180397 - 14180563
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||| ||||||    
T  14180397 ctaaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 14180496  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14180497 atgttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 14180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 16999548 - 16999320
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattcta--agt 108  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||    |||  ||||||||||||| |||||||||||||||||||||  |||    
T  16999548 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataagt 16999449  T
Q  109 tgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttagg-aattaagttttgaagttgtaattggttgttaatagagtagaa 207  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||| |||||| || ||||| |||||||||||||||| |||||||||||||||||||    
T  16999448 tgtataattctgaaattgagtttagcatgttatatgttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgttaatagagtagaa 16999349  T
Q  208 aatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||||    
T  16999348 aatccgttgaatttgtgtagaattgatgt 16999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 20214207 - 20214034
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaattt 162  Q
    |||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  20214207 gattaatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 20214108  T
Q  163 aggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20214107 gggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 20214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 20620338 - 20620173
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatta 170  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||| |||||||    
T  20620338 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatta 20620239  T
Q  171 agttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20620238 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20620173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 46386038 - 46386253
Alignment:
Q  17 agagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataat 116  Q
    |||||| ||||||||||||| | |||||||||||||| |||||||  ||    ||||| |||||||  ||||||||||||||||||||||||||||||||    
T  46386038 agagaataatcttgtgagaagatgagcaatcttgtagtgttcgatcaat----ctaagataagggtaggactaactttctctaattctaagttgtataat 46386133  T
Q  117 tctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttg 216  Q
    ||||||||||| ||||  ||||||||||||||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  46386134 tctgaaattgagtttaatatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaattccgttg 46386233  T
Q  217 aatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||    
T  46386234 aatttgtgtagaattgatgt 46386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 32 - 236
Target Start/End: Original strand, 12127124 - 12127328
Alignment:
Q  32 gagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgatttt 131  Q
    ||||| ||||||||||| ||||||  ||||    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  12127124 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 12127223  T
Q  132 agcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    | ||||||||||||| ||||||||  ||||| ||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  12127224 aacatgttgtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtagaatt 12127323  T
Q  232 gatgt 236  Q
     ||||    
T  12127324 tatgt 12127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 20586405 - 20586239
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||  | || |    
T  20586405 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaaact 20586306  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20586305 agggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20586239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 10277375 - 10277215
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||  |||||| |||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 10277215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 47974760 - 47974944
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47974760 cagagaagaaaagaatcttgtgagaagaggagcaatattgtagagttcgatcgattaacctaaggtaagggtgagactaactttctctaattctaagttg 47974859  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgtt 195  Q
    ||| ||||||||| ||  |||| || || ||||||||||||| ||  ||||| ||||||| |||| |||||||||||||||||||    
T  47974860 tatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 24269946 - 24270112
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| | ||||   | || ||| || ||||||    
T  24269946 ctaaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttgggaatt 24270045  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  24270046 aggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattgatgt 24270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 12754553 - 12754716
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||     
T  12754553 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttc-atcgattaacctaaggtaagggtgggactaactttctctaattctaagtta 12754651  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttt 175  Q
    ||| ||||||||| ||  |||| || || |||||||||||| |||  ||||| ||||||| ||||    
T  12754652 tatgattctgaaactggatttaacaggtggtaggttgtagtaatggaaatttgggaattatgttt 12754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 32160140 - 32160252
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||      
T  32160140 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtaagactaactttctctaattctaagtaa 32160239  T
Q  111 tataattctgaaa 123  Q
    | |||||||||||    
T  32160240 tttaattctgaaa 32160252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 70 - 183
Target Start/End: Original strand, 14218894 - 14219008
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||||||||||||| ||||||||| |||||    
T  14218894 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaat 14218993  T
Q  169 taagttttgaagttg 183  Q
    || |||| |||||||    
T  14218994 taggtttagaagttg 14219008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 8488034 - 8488142
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| | || |||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||  |  ||||    
T  8488034 cagagaagagaagaatcttgtgagaagaagaacaatcttgtaaagttcgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttg 8488133  T
Q  111 tataattct 119  Q
    |||||||||    
T  8488134 tataattct 8488142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 8513693 - 8513801
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| | || |||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||  |  ||||    
T  8513693 cagagaagagaagaatcttgtgagaataagaacaatcttgtaaagttcgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttg 8513792  T
Q  111 tataattct 119  Q
    |||||||||    
T  8513793 tataattct 8513801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 183
Target Start/End: Original strand, 35771433 - 35771554
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| |||| || |||| || |||||||||||||||| ||  ||||    
T  35771433 gattaacctaaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatt 35771532  T
Q  162 taggaattaagttttgaagttg 183  Q
    | ||||||| |||| |||||||    
T  35771533 tgggaattaggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 16214581 - 16214514
Alignment:
Q  16 aagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtg 83  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  16214581 aagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtg 16214514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 43276685 - 43276796
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| |||||||||||||||||  |  |||||    
T  43276685 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgt 43276784  T
Q  112 ataattctgaaa 123  Q
    ||||||||||||    
T  43276785 ataattctgaaa 43276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 15119248 - 15119337
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||  ||||||| |||| ||||    
T  15119248 agagaagagaagaatattgtgagaagaggagcaatcttgtagagtttgatcgattaacctaaggtaagggtaggactaaccttctttaat 15119337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 56 - 183
Target Start/End: Complemental strand, 4071887 - 4071759
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttat 154  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||||||||||||| |    
T  4071887 ttcgatcgattaacctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagtttt 4071788  T
Q  155 gagaatttaggaattaagttttgaagttg 183  Q
    | | ||||  |||||| |||| |||||||    
T  4071787 ggggatttgagaattaggtttagaagttg 4071759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 15095636 - 15095759
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| || |||||| |||||    
T  15095636 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaat 15095734  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || |||| |||||||||||| ||||    
T  15095735 taggtttagaagttgtaattagttg 15095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 48807324 - 48807448
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| || |||| || ||||||| |||||||| || |||||| |||||    
T  48807324 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaat 48807423  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    |  ||   |||||||||||||||||    
T  48807424 ttggtacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 8135237 - 8135359
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||| ||| ||||| |||||| |||| ||||||||||||| |||| || |||||||||||||||| |  ||||||  |||||    
T  8135237 ctaaggtaagggtgagactaaccttcactaatcctaagt-gtatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgagaatt 8135335  T
Q  170 aagttttgaagttgtaattggttg 193  Q
    | |||| |||||||||||||||||    
T  8135336 aggtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 19283167 - 19283056
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||   |  |||||    
T  19283167 agagaagagaagaatcttgtgagaaaaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaagaatgggttgt 19283068  T
Q  112 ataattctgaaa 123  Q
    ||||||||||||    
T  19283067 ataattctgaaa 19283056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 33002210 - 33002053
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttagg 165  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||  |||| |       ||||||||||| || |||||| ||    
T  33002210 taacttaaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaac-------aggttgtagtt-tgggaatttggg 33002119  T
Q  166 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    ||||| | || |||||||||||||||||||   | |||||| |||| |||||||| ||||||||||    
T  33002118 aattagggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtagaatt 33002053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 10658843 - 10658932
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagtt 152  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||||||||  |||| ||| ||||||| |||||||    
T  10658843 gattaacctaaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagtt 10658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 25943166 - 25943041
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    |||| |||| || ||||||||||||||| |  ||||||||||||||||||||| ||||||||||||| | ||||   | || |||||| | ||||| |||    
T  25943166 gtaacggtgggattaactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaattaggtt 25943067  T
Q  175 ttgaagttgtaattggttgttaatag 200  Q
    ||||||| ||||||||||||||||||    
T  25943066 ttgaagtcgtaattggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 44374934 - 44374833
Alignment:
Q  32 gagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgatttt 131  Q
    ||||| ||||||||||| ||||||  ||||    ||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||    
T  44374934 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagttt 44374835  T
Q  132 ag 133  Q
    ||    
T  44374834 ag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 44383799 - 44383698
Alignment:
Q  32 gagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgatttt 131  Q
    ||||| ||||||||||| ||||||  ||||    ||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||    
T  44383799 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagttt 44383700  T
Q  132 ag 133  Q
    ||    
T  44383699 ag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 193
Target Start/End: Complemental strand, 15140266 - 15140143
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| || |||||| |||||    
T  15140266 ctaaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaat 15140168  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || ||||  ||||||||||||||||    
T  15140167 taggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 15289172 - 15289052
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttat 154  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||||||||||||| |    
T  15289172 ttcgatcgattaacctaaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagtttt 15289073  T
Q  155 gagaatttaggaattaagttt 175  Q
    ||| ||||  |||||| ||||    
T  15289072 gaggatttgagaattaggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 19195725 - 19195611
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaa--aggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||| |  |||| |||||||||||||| ||||    ||| |||||||||||||| ||||| |||||||||||  | |||    
T  19195725 cagagaagagaagaatcttgtgagataggaggaacaatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagt 19195626  T
Q  109 tgtataattctgaaa 123  Q
    |||||||||||||||    
T  19195625 tgtataattctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 4690658 - 4690715
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  4690658 taacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 16078382 - 16078282
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| || |||| || |||| || ||||||| |||||||| || |||||| ||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatt 16078283  T
Q  170 a 170  Q
    |    
T  16078282 a 16078282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 18955397 - 18955330
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||    
T  18955397 ttcgatcgattaacctaaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaa 18955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 58353 - 58443
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||||||||||||||||| |||| |||||||||||| | ||||    ||| |||||||||||||| ||||| |||||||||||    
T  58353 cagagaagagaagaatcttgtgagaagaggaacaatcttgtagattccgatcatctaatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 192
Target Start/End: Complemental strand, 15624071 - 15623950
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||| |||  ||||||||||| |||| ||||||||||||| ||||  | ||||||| |||||||| || ||||||  |||||    
T  15624071 ctaaggtaagggtgagactaaccttcaataattctaagt-gtatgattctgaaattgaatttaataggttgtagtttgtagttttgggaatttgagaatt 15623973  T
Q  170 aagttttgaagttgtaattggtt 192  Q
    | |||| | ||||||||||||||    
T  15623972 aggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 13698637 - 13698761
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||  |||||||||||| ||||| |||||||  |||||||| ||||||  |||  |||||| |||||||||||| ||  ||||| |||||    
T  13698637 ctaaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaat 13698736  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || | || |||||||||||||||||    
T  13698737 tagggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 36704556 - 36704652
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||| |||||| |||||||||||||| ||||||| |||| ||||| |||||||| |||||||||||||   |||| ||||||||| | |||||||    
T  36704556 ttcgatcgattaatctaaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaatttgatttaacatgttgtaagatgtagtt 36704652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 18990914 - 18990847
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||| |||||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||    
T  18990914 ttcgatcgattaacctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaa 18990847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 13744662 - 13744728
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 141  Q
    ||||||||| || ||||||||||||||| || ||||||||||||||||||| | |||||||||||||    
T  13744662 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 18074588 - 18074693
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    |||| |||||||||||||||||||| | || |||||||||||||| |||     |||  ||||||||| ||| || ||||||||||||||||||||| ||    
T  18074588 agaggagagaagaatcttgtgagaagaagatcaatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaattctaagtggt 18074687  T
Q  112 ataatt 117  Q
    ||||||    
T  18074688 ataatt 18074693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 13132363 - 13132443
Alignment:
Q  113 taattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttg 193  Q
    ||||||||||||||| |||| || ||||||||| |||||| || |||||| ||||||| |||| ||||||||||| |||||    
T  13132363 taattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 12557974 - 12557853
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    ||||| |||| ||| ||||||| ||| |||||||||||| |||| ||||| ||| |||| |||| || |||||||||||||||| || |||||| | |||    
T  12557974 ctaagataagagtgagactaaccttcactaattctaagt-gtatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttggaaat 12557876  T
Q  169 taagttttgaagttgtaattggt 191  Q
    || |||| ||||||| |||||||    
T  12557875 taggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 14160796 - 14160846
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgat 61  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  14160796 cagagaagagaagaatcttgtgtgaagaggagcaatcttgtagagtccgat 14160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 29052181 - 29052234
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  29052181 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29052234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 193
Target Start/End: Complemental strand, 11054780 - 11054642
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttat 154  Q
    |||||| |||||| |||||||||||||| ||||||| |||  | |||||||| ||| | |||||| ||||||| |||| || ||||||||||||| || |    
T  11054780 ttcgatcgattaaactaaggtaagggtgggactaaccttcaatgattctaag-tgtttgattctgaaaattgaatttaacaggttgtaggttgtaatttt 11054682  T
Q  155 gagaatttagg-aattaagttttgaagttgtaattggttg 193  Q
    | |||||| || ||||| | ||  ||||||||||||||||    
T  11054681 gggaatttgggaaattagggttataagttgtaattggttg 11054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 25942401 - 25942358
Alignment:
Q  193 gttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  25942401 gttaatagagtagaaaatccattgaatttgtgtacaattgatgt 25942358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 3287797 - 3287744
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  || |||||||||||||||||    
T  3287797 ctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaa 3287744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 16250221 - 16250274
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| |||||||||||||||||  | |||||||||||| |||||    
T  16250221 ctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaa 16250274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 16550004 - 16550057
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||||||||| || ||||||||||||||||||||||||  | |||||||||||    
T  16550004 ctaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16550057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 16615658 - 16615605
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||||||||| || ||||||||||||||||||||||||  | |||||||||||    
T  16615658 ctaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16615605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 43745713 - 43745656
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||||||| ||||| |||||||||||  | |||||||||||| |||||    
T  43745713 taacctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaa 43745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 18874664 - 18874717
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  18874664 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 18874717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 20252181 - 20252234
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||  ||||| |||||||||||  | ||||||||||||||||||    
T  20252181 ctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaa 20252234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 38299801 - 38299748
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  38299801 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 38299748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 48212722 - 48212775
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||||||||||||| ||||||| |||  || ||||||| |||||    
T  48212722 taacctaaggtaagggtgtgactagctttctccaataataggttgtatgattct 48212775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 14928290 - 14928362
Alignment:
Q  72 aaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtag 143  Q
    |||||||||||| ||||||| |||  |||||||||||| | |||||||| ||||||  |||| ||||||||||    
T  14928290 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 14928362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 15351756 - 15351828
Alignment:
Q  72 aaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtag 143  Q
    |||||||||||| ||||||| |||  |||||||||||| | |||||||| ||||||  |||| ||||||||||    
T  15351756 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 15351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 41285043 - 41284963
Alignment:
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggt 191  Q
    ||||||||||||||||  ||||  | ||| |||||||||||| |  |||||| ||||||| |||| |||||| ||||||||    
T  41285043 tataattctgaaattggatttaataggttataggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 7828084 - 7827859
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  7828084 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 7827985  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  7827984 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 7827885  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    | ||||||||||||||||||||||||    
T  7827884 cggttgaatttgtgtagaattgatgt 7827859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 19655171 - 19655396
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  19655171 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 19655270  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  19655271 tataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaat 19655370  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  19655371 ccgttgaatttgtgtagaattgatgt 19655396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 23150227 - 23150452
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  23150227 cagagaagagaaaaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 23150326  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  23150327 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaat 23150426  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
      ||||||||||||||||||||||||    
T  23150427 ttgttgaatttgtgtagaattgatgt 23150452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 15890711 - 15890877
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||  ||||| ||||||    
T  15890711 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttgggaatt 15890810  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890811 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 15890877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 18703680 - 18703451
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||| ||||    |||  ||||||||| ||| ||||||||||||||||||||||||||    
T  18703680 cagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttg 18703581  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgt----aattggttgttaatagagtaga 206  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| |||||| |||||||  ||||||||||||    ||||||||||||||||||||||    
T  18703580 tataattctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtaga 18703481  T
Q  207 aaatccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||| ||||| ||||||    
T  18703480 aaatccgttgaatttgtatagaagtgatgt 18703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 18709615 - 18709386
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||| ||||    |||  ||||||||| ||| ||||||||||||||||||||||||||    
T  18709615 cagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttg 18709516  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgt----aattggttgttaatagagtaga 206  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| |||||| |||||||  ||||||||||||    ||||||||||||||||||||||    
T  18709515 tataattctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtaga 18709416  T
Q  207 aaatccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||| ||||| ||||||    
T  18709415 aaatccgttgaatttgtatagaagtgatgt 18709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 27125419 - 27125642
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    |||||||||| |||| ||||||||| | ||||||||||||||||| ||||    |||  ||||||||||||| |||||||||||||||||||||||||||    
T  27125419 agagaagaga-gaattttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgt 27125517  T
Q  112 ataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatc 211  Q
    |||| ||| |||||||  |||||||||||||||||||||||||| |||||| ||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  27125518 ataagtctaaaattgagattagcatgttgtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgttaatagagtagaaaatc 27125617  T
Q  212 cgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||| ||||| ||||||    
T  27125618 cgttgaatttgtatagaagtgatgt 27125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 70 - 221
Target Start/End: Original strand, 27329980 - 27330131
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||  ||||| ||||||    
T  27329980 ctaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatt 27330079  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 221  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27330080 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 70 - 221
Target Start/End: Original strand, 27390720 - 27390871
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||  ||||| ||||||    
T  27390720 ctaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatt 27390819  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 221  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27390820 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 24267900 - 24267810
Alignment:
Q  72 aaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaattt 162  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 24267810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 19235176 - 19235015
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||| |||||||| || ||||||||||||||| || ||||||||||||||||||||||||||| ||||||| | ||||   | || |||||| || |||    
T  19235176 ctaagttaagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaattt-gggatt 19235078  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 232  Q
    | |||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| |||||    
T  19235077 aggttttgaagtcgtaattggttgttaataaagtagaaaatccattgaacttgtgtacaattg 19235015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  74 ggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagt 173  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||  ||||||||||||| ||    
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 18585755  T
Q  174 tttgaagttgtaattggttgtt 195  Q
    || |||||||||||||||||||    
T  18585754 ttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 28948628 - 28948466
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgag-aatttaggaat 168  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| ||||||| | | || ||||| |||||    
T  28948628 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttgggaat 28948529  T
Q  169 taagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    || |||| |||||||||||||||||||   | ||||||||||  |||||||| ||||||||||    
T  28948528 taggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtagaatt 28948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 31734819 - 31734729
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| ||||    
T  31734819 cagagaagaaaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 31734729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 232
Target Start/End: Original strand, 30673401 - 30673556
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| || ||||||||||||||| || ||||||||||| ||||||||| ||||||||| ||| | ||||        |||||| ||||||    
T  30673401 ctaaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt--------gaattttggaatt 30673492  T
Q  170 aagttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 232  Q
    | |||||||| | |||| |||||||||||||||||||||||| | ||||||||||||| |||||    
T  30673493 aggttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgtacaattg 30673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 18928734 - 18928614
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||  |||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| |||| || |||||| | |||    
T  18928734 ctaaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaat 18928635  T
Q  169 taagttttgaagttgtaattg 189  Q
    || |||| |||||||||||||    
T  18928634 taggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 15998949 - 15998889
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15998949 gattatcctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 15998889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 19167930 - 19167998
Alignment:
Q  164 ggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 232  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  19167930 ggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattg 19167998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 27572122 - 27572198
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcat-gttgtaggtt 146  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||||    
T  27572122 taaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatggttgtaggtt 27572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 31731889 - 31731986
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||| ||||||  |||  || ||||||||||||||||    
T  31731889 ttcgatcgattaacctaaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagtt 31731986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 12041612 - 12041672
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  12041612 gattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 20410452 - 20410564
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  |||||||||||||  | || |||||||||||  |  ||||    
T  20410452 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtgcgatcatctaatttaaggtaagggtggaaatagctttctctaataatgggttg 20410551  T
Q  111 tataattctgaaa 123  Q
    |||||||||||||    
T  20410552 tataattctgaaa 20410564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 24550157 - 24550249
Alignment:
Q  60 attgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagtt 152  Q
    ||||| |||||||||||||||||| ||||||  |||| ||||| |||||||| ||||||||||||||  |||| ||||||||||| |||||||    
T  24550157 attgactaacctaaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 24550249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 19401146 - 19401028
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||||||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| || ||||||  |||||    
T  19401146 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaatt 19401048  T
Q  170 aagttttgaagttgtaattg 189  Q
    | ||||  ||||||||||||    
T  19401047 aggtttataagttgtaattg 19401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 17318106 - 17318156
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgat 61  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  17318106 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgat 17318156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 19167852 - 19167923
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 141  Q
    ||||||||||||||  | ||||||| ||||||  || ||||||||||||||| ||||| |||||||||||||    
T  19167852 ctaaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgt 19167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 15173452 - 15173505
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||||||| |||| ||||||||||||||||||||||||  | |||||||||||    
T  15173452 ctaaggtaatggtgggactaactttctctaattctaagtattttaattctgaaa 15173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 15900653 - 15900706
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||| ||||||||||||||||||||  | |||||||||||    
T  15900653 ctaaggtaagggtgagaccaactttctctaattctaagtattttaattctgaaa 15900706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 193
Target Start/End: Complemental strand, 23501725 - 23501601
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtag-ttatgagaatttaggaa 167  Q
    |||||||||||||| ||||||| |||  |||||||||  ||| |||||||| ||| ||| |||| || |||||||||||||| || ||  ||||| ||||    
T  23501725 ctaaggtaagggtgagactaaccttcaataattctaa-atgtttaattctgaaaactgaatttaacaagttgtaggttgtagtttttggaaatttgggaa 23501627  T
Q  168 ttaagttttgaagttgtaattggttg 193  Q
    ||| |||| |||||||||||| ||||    
T  23501626 ttaggtttagaagttgtaatttgttg 23501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 29625231 - 29625191
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataa 115  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  29625231 gtaagggtgggactaactttctctaattctacgttgtataa 29625191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 23658147 - 23658089
Alignment:
Q  65 ttaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||| |||||||||||||| ||||| ||||| |||||  || |||||||||||||||||    
T  23658147 ttaatctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaa 23658089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 21683070 - 21683127
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||||||| ||||| |||||||||||  |  |||||||||||| ||||    
T  21683070 taacctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaa 21683127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 6e-89; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 17047238 - 17047013
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  17047238 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 17047139  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  17047138 tataattctgaaattgagtttagcatgttgtaggttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgttaatagagtaaaaaat 17047039  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  17047038 ccgttgaatttgtgtagaattgatgt 17047013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 17045078 - 17044853
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  17045078 cagagaagagaagaatcttgtgagaagatgagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 17044979  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  17044978 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 17044879  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
      ||||||||||||||||||||||||    
T  17044878 ttgttgaatttgtgtagaattgatgt 17044853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 22306523 - 22306736
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  22306523 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 22306622  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  22306623 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaat 22306722  T
Q  211 ccgttgaatttgtg 224  Q
    ||||||||||||||    
T  22306723 ccgttgaatttgtg 22306736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 11259537 - 11259318
Alignment:
Q  17 agagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataat 116  Q
    |||||||||||||| ||||| ||||||||||||||||||| |||||   |||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  11259537 agagaagaatcttgcgagaagaggagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataat 11259438  T
Q  117 tctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttg 216  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  11259437 tctgaaattgaatttagcatgttgtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgttaataaagtagaaaatccgttg 11259338  T
Q  217 aatttgtgtagaattgatgt 236  Q
    ||||||||||||| ||||||    
T  11259337 aatttgtgtagaagtgatgt 11259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 40812941 - 40812720
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||| |||||||||||||||| | || |||| ||||||||||||||  ||    |||||||||||||| ||||||||||||||||||||||||||    
T  40812941 cagagaagaaaagaatcttgtgagaagatgaacaattttgtagagttcgatcaat----ctaaggtaagggtgggactaactttctctaattctaagttg 40812846  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
     |||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  40812845 cataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattgattgttaatagagtagaaaat 40812746  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  40812745 ccgttgaatttgtgtagaattgatgt 40812720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 17539217 - 17538993
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| | ||||    |||  ||||||||||||| |||||||||| ||||||||||||||||    
T  17539217 agagaagagaagaatcttgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttatctaattctaagttgt 17539118  T
Q  112 ataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatc 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||| | ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  17539117 ataattctgaaattgattttatcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgttaatagagtagaaaatc 17539018  T
Q  212 cgttgaatttgtgtagaattgatgt 236  Q
     ||||||||||||||||||||||||    
T  17539017 tgttgaatttgtgtagaattgatgt 17538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 40808049 - 40807883
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  40808049 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 40807950  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807949 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40807883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 49900783 - 49900608
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  49900783 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 49900684  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatctcat 245  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  49900683 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatatcat 49900608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 17694179 - 17693954
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||||    |||  ||| ||||||||| ||||||||||||||||||||||||||    
T  17694179 cagagaagagaagaatcttgcgagaagaggagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagttg 17694080  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||  |||||  ||||||  ||||||||||||||||| | ||||||||||||||||||    
T  17694079 tataattctaaaattgagtttagcatgttgtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattgatcgttaatagagtagaaaat 17693980  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  17693979 ccgttgaatttgtgtagaattgatgt 17693954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 17518872 - 17519038
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| ||||||    
T  17518872 ctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtaggttgtagttatgggaatttgggaatt 17518971  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17518972 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 17533734 - 17533900
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| ||||||    
T  17533734 ctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtaggttgtagttatgggaatttgggaatt 17533833  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17533834 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 15931448 - 15931672
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||   ||||  |||||||| |||| |||||||||||||||||||||||| |    
T  15931448 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagt-g 15931546  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    |||||||||||||| || ||||||||||| |||||||||||||||||||||| ||||||| |||| ||||||||||||  || |||||||||||||||||    
T  15931547 tataattctgaaatagagtttagcatgttttaggttgtagttatgagaattttggaattaggtttcgaagttgtaattaattattaatagagtagaaaat 15931646  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
     |||||||||||||||||||||||||    
T  15931647 tcgttgaatttgtgtagaattgatgt 15931672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 41172311 - 41172534
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||||||| || | |||||||||||||||||  |||    |||  ||||||||||||| ||||||||||||||| || |||||||    
T  41172311 cagagaagagaagaatcttgtgacaagatgagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctacttataagttg 41172410  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  41172411 tataactctgaaattgagtttagcatgttgtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 41172510  T
Q  211 ccgttgaatttgtgtagaattgat 234  Q
      ||||||||||||||||||||||    
T  41172511 ttgttgaatttgtgtagaattgat 41172534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 44274471 - 44274305
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  44274471 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 44274372  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |  |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  44274371 atattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattgatgt 44274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 35354714 - 35354489
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| | ||    |||  |||| |||| ||| |||||||||||||||||| |||||||    
T  35354714 cagagaagagaagaatcttgtgataagaggagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaattttaagttg 35354615  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||| | ||||| |||||||||||||||||| |||||  |||||||||||||    
T  35354614 tataattctgaaattgagtttagcatgttgttggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgttggtagagtagaaaat 35354515  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  35354514 ccgttgaatttgtgtagaattgatgt 35354489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 50348041 - 50348191
Alignment:
Q  86 actaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgta 185  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  50348041 actaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 50348140  T
Q  186 attggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50348141 attggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 50348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 10311575 - 10311415
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||| |||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 10311415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 10563761 - 10563596
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||  ||||| ||||||    
T  10563761 ctaaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttgggaatt 10563662  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  10563661 aggttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg-gtagaattgatgt 10563596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 14508959 - 14508749
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||| ||||||||||||| | ||| ||||||||||||| ||||    |||  || |||||||||| ||||||||||||||||||||||||||    
T  14508959 cagagaagagaataatcttgtgagaagaagagtaatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagttg 14508860  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtttt-gaagttgtaattggttgttaatagagtagaaaa 209  Q
    |||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||  | |||||||| ||    
T  14508859 tataattctgaaattgaggttagcatgttgtaggttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagataa 14508760  T
Q  210 tccgttgaatt 220  Q
    || | ||||||    
T  14508759 tctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 17541546 - 17541423
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  |||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  17541546 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 17541447  T
Q  111 tataattctgaaattgattttagc 134  Q
    ||||||||||||||||| ||||||    
T  17541446 tataattctgaaattgagtttagc 17541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 19568207 - 19568368
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |   |||| || |||||||||||||||| || |||||| ||||||    
T  19568207 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttgggaatt 19568306  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    | | || ||||||||||||||| |||   | |||||| ||||||||||||  ||||||||||    
T  19568307 agggttagaagttgtaattggtagttgtaatagtagagaatccgttgaatcggtgtagaatt 19568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 14152339 - 14152451
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||||||| ||||| |||||||||||  | |||||    
T  14152339 cagagaagagaagaatcttgtgagaagaggagcaatcttgtatagttcgatccattaacctaaggtaagggtgggactagctttctctaataatgagttg 14152438  T
Q  111 tataattctgaaa 123  Q
    ||| |||||||||    
T  14152439 tatcattctgaaa 14152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 33565140 - 33565018
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| |||| || |||||| | |||    
T  33565140 ctaaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaat 33565041  T
Q  169 taagttttgaagttgtaattggt 191  Q
    || |||| |||||||||||||||    
T  33565040 taggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 35064566 - 35064658
Alignment:
Q  96 tctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaatt 188  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||  ||||| ||||||| |||||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 16050994 - 16050875
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatg 155  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  |||| || |||||| ||||||||| ||    
T  16050994 ttcgatcgattaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttg 16050895  T
Q  156 agaatttaggaattaagttt 175  Q
    || ||||  |||||| ||||    
T  16050894 aggatttgagaattaggttt 16050875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 9510915 - 9511076
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||| |||||||| || ||||||  |||||    
T  9510915 ctaaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatt 9511014  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    | |||| |||||||||||||||||||   | ||||||||||| ||||| || || |||||||    
T  9511015 aggtttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9511076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 9518890 - 9519051
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||| |||||||| || ||||||  |||||    
T  9518890 ctaaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatt 9518989  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    | |||| |||||||||||||||||||   | ||||||||||| ||||| || || |||||||    
T  9518990 aggtttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9519051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 193
Target Start/End: Complemental strand, 11563778 - 11563654
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||||||||| ||||  | |||| || |||||||||||||||| || |||||| |||||    
T  11563778 ctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagttttgggaatttgggaat 11563679  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || ||||  ||||||||||||||||    
T  11563678 taggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 35064681 - 35064745
Alignment:
Q  172 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35064681 gttttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattgatgt 35064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 5200277 - 5200335
Alignment:
Q  178 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 42323970 - 42324094
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| ||||||| || | ||||| ||||||||||||||||| ||||||| |||  ||||||||||||||||||| || |||||| | |||    
T  42323970 ctaaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaat 42324069  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || | || |||||||||||||||||    
T  42324070 tagggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 191
Target Start/End: Original strand, 35960927 - 35961049
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| || |||||||||||||||||| || ||||||||||| ||||||| |||| || ||||||||||| |||| ||  ||||| | |||    
T  35960927 ctaaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaat 35961026  T
Q  169 taagttttgaagttgtaattggt 191  Q
    || |||| |||||||||||||||    
T  35961027 taggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 11885542 - 11885639
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||| ||||||  |||| || ||||||||||||||||    
T  11885542 ttcgatcgattaacctatggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt 11885639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 49968859 - 49968981
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||| ||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || ||||||| |||||||| ||||||||| ||||||    
T  49968859 taaggtaagagtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaatt 49968957  T
Q  170 aagttttgaagttgtaattggttg 193  Q
    | ||||  ||||||||||||||||    
T  49968958 aggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 12509346 - 12509431
Alignment:
Q  67 aacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagtt 152  Q
    ||||||||||||||||| ||| ||| |||| |||||||||||||||||||||||||||||  |||| ||||| ||||| |||||||    
T  12509346 aacctaaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagtt 12509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 183
Target Start/End: Complemental strand, 13185948 - 13185834
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattct-gaaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||  |||| || |||| || |||||||||||||||| ||  ||||| |||||    
T  13185948 ctaaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaat 13185849  T
Q  169 taagttttgaagttg 183  Q
    || |||| |||||||    
T  13185848 taggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 15446867 - 15446920
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  15446867 ctaaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 15566797 - 15566744
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15566797 ctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 24177735 - 24177840
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||||||||||| ||  ||||  | || ||||||||||||| ||  ||||| ||||||    
T  24177735 ctaaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatt 24177834  T
Q  170 aagttt 175  Q
    | ||||    
T  24177835 atgttt 24177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 45530544 - 45530725
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||    |||  |||||||| | || ||||||| ||   |||||||||| |     
T  45530544 cagagaaga-aagaatcttgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaa-gatgggactaacatttaataattctaag-ta 45530640  T
Q  111 tataattctg-aaattgattttagcatgttgtaggttgtagttatgagaattt-aggaattaagttttgaagttgtaattggttg 193  Q
    ||| |||||| ||||||| |||| || ||||| |||||||||| || ||||||  | ||||| | || |||||||||||||||||    
T  45530641 tatgattctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 37039085 - 37038978
Alignment:
Q  88 taactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttagg-aattaagttttgaagttgta 185  Q
    |||| |||| ||||| ||||||||||||||||| ||||||  |||| ||||||||||||||||||| || |||||| || ||||| | ||  ||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgta 37038986  T
Q  186 attggttg 193  Q
    ||||||||    
T  37038985 attggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 5200242 - 5200284
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgta 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  5200242 ctaaggtaagggtgggactaactttctctaattctaagttgta 5200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 17325561 - 17325606
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagt 56  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||    
T  17325561 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagt 17325606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 36528920 - 36528851
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgtt 139  Q
    |||||||||||||| || |||||||||||||||||||||  ||||||||||| ||||  |||| ||||||    
T  36528920 ctaaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggtttaacatgtt 36528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 50350759 - 50350846
Alignment:
Q  14 agaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    ||||||||||||||||||||||| |||| || | ||||||||| ||||    ||| |||||||||||||| ||||||| |||| ||||    
T  50350759 agaagagaagaatcttgtgagaagaggaacagtgttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaat 50350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 16979965 - 16979912
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| |||||||||||| |||||||||||  | |||||||||||    
T  16979965 ctaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 16979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 17208577 - 17208524
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  17208577 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 17208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 22652825 - 22652773
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||||||| ||| ||||||||||||||||||||||||  | |||||||||||    
T  22652825 taaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaa 22652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 170
Target Start/End: Original strand, 22758835 - 22758933
Alignment:
Q  72 aaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaatta 170  Q
    |||||||||||| ||||||| |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| ||||| |||| |||| |||||||    
T  22758835 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatta 22758933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 14250085 - 14250163
Alignment:
Q  74 ggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||| ||| ||||||| |||| |||||||||||||| ||||| | ||||||  |||| ||||||||| | |||||||    
T  14250085 ggtaagagtgggactaaccttctttaattctaagttgtgtaattttcaaattggatttaacatgttgtaagatgtagtt 14250163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 50347596 - 50347656
Alignment:
Q  32 gagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaact 92  Q
    ||||||||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||    
T  50347596 gagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaact 50347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 162; Significance: 1e-86; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 4654 - 4879
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||  ||||||||||||||||||||||||||    
T  4654 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagttg 4753  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  4754 tataattctgaaattgagtttagcatgttgtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 4853  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  4854 ccgttgaatttgtgtagaagtgatgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 5821 - 5869
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||| ||| |||||||||||  |||||||||||||| |||||||||||    
T  5821 gtaagtgtgagactaactttccttaattctaagttgtgtaattctgaaa 5869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 11215 - 11439
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||||||||||||| || ||| ||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  11215 cagagaagagaagaatcttgtgagaaaag-agtaatgttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 11313  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11314 tatatttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 11413  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  11414 ccgttgaatttgtgtagaattgatgt 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 58858 - 58633
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  58858 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttg 58759  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    || |||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  58758 tacaattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 58659  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||| ||||||||||||    
T  58658 ccgttgaatttgtatagaattgatgt 58633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 162; Significance: 1e-86; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 32106 - 31881
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||||||||||||||||||||||||||||||    
T  32106 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttg 32007  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  32006 tataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaat 31907  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
     |||||||||||||||||| ||||||    
T  31906 tcgttgaatttgtgtagaagtgatgt 31881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 37413 - 37188
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||||||||||||||||||||||||||||||    
T  37413 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttg 37314  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  37313 tataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaat 37214  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
     |||||||||||||||||| ||||||    
T  37213 tcgttgaatttgtgtagaagtgatgt 37188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 77799 - 77574
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||||  |||    ||| |||||||||||||| ||||||||||||||||||||||||||    
T  77799 cagagaacagaagaatcttgtgagaagaggagtaatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttg 77700  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||| ||||||||||||||||||||||    
T  77699 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgttaatagagtagaaaat 77600  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||| |||||||||    
T  77599 ccgttgaatttgtgtataattgatgt 77574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 9e-85; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 24780783 - 24781005
Alignment:
Q  14 agaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtat 113  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| |||||||||||||||||||||||||||||    
T  24780783 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 24780882  T
Q  114 aattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccg 213  Q
    |||||||||||||| |||||||||  |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24780883 aattctgaaattgagtttagcatgaagtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccg 24780982  T
Q  214 ttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||| ||||||    
T  24780983 ttgaatttgtgtagaagtgatgt 24781005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 24436760 - 24436535
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  |||| |||||||| ||||||||||||| ||||||||||||    
T  24436760 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagttg 24436661  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| | ||||| ||||||||||||||||| |||||||||||||||||||||    
T  24436660 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgttaatagagtagaaaat 24436561  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||    
T  24436560 ccgttgaatttgtgtagaattgatgt 24436535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 5031072 - 5031297
Alignment:
Q  14 agaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtat 113  Q
    ||||||||||||||||||||||| | ||||||||||||||||| | ||    |||  ||||||||||||| |||||||||||||||||||||||||||||    
T  5031072 agaagagaagaatcttgtgagaagatgagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 5031171  T
Q  114 aattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccg 213  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| ||    
T  5031172 aattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaattcg 5031271  T
Q  214 ttgaatttgtgtagaattgatgtcca 239  Q
    |||||||||||||||| |||||||||    
T  5031272 ttgaatttgtgtagaagtgatgtcca 5031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 9976041 - 9975816
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||| ||||    |||  ||||||||||||  ||||||||||||||||||||||||||    
T  9976041 cagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 9975942  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||| |||    
T  9975941 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagacaat 9975842  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
    ||| ||||||||||||||||||||||    
T  9975841 ccgctgaatttgtgtagaattgatgt 9975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 17307539 - 17307373
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  17307539 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 17307440  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17307439 aggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 17307373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 24516239 - 24516073
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||| ||||||    
T  24516239 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatt 24516140  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516139 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24516073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 22251388 - 22251600
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||  |||    |||  |||||||||||||  ||||| |||||||||||||||||||    
T  22251388 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtctgatcatctaatttaaggtaagggtgaaactaattttctctaattctaagttg 22251487  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  22251488 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 22251587  T
Q  211 ccgttgaatttgt 223  Q
    | |||||||||||    
T  22251588 ctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 40912373 - 40912207
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  40912373 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 40912274  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  40912273 aggttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtagaaatgatgt 40912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 66 - 236
Target Start/End: Original strand, 19201195 - 19201365
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttagg 165  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  |||||| ||    
T  19201195 taacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttataggaatttggg 19201294  T
Q  166 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  19201295 aattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattgatgt 19201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 2523687 - 2523912
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||| ||||||| ||||||||||||| ||||||||||||||| ||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  2523687 cagaaaagagaaaaatcttgtgagaagaggagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 2523786  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| ||||||| |||| |||||||||||||||| ||||| |||||| | ||||| ||||| || |||||||||||| |||||||||||||||||    
T  2523787 tataattcttaaattgagtttaacatgttgtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggttattaatagagtagaaaat 2523886  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
     ||||||||||||| |||||||||||    
T  2523887 tcgttgaatttgtgcagaattgatgt 2523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 37270747 - 37270587
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 37270587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 27484514 - 27484642
Alignment:
Q  108 ttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaa 207  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27484514 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaa 27484613  T
Q  208 aatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||||    
T  27484614 aatccgttgaatttgtgtagaattgatgt 27484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 119 - 236
Target Start/End: Complemental strand, 36841268 - 36841151
Alignment:
Q  119 tgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaa 218  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||  ||||||    
T  36841268 tgaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaa 36841169  T
Q  219 tttgtgtagaattgatgt 236  Q
    ||||||||||||||||||    
T  36841168 tttgtgtagaattgatgt 36841151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 27852776 - 27852605
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||| ||||  ||    |||||||||||||| |||||||||||||||||||||||| |    
T  27852776 cagagaagagaagaatcttgtgaaaagaggagcattcttgtagagtccgatcaat----ctaaggtaagggtgggactaactttctctaattctaagtgg 27852681  T
Q  111 tataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgta 185  Q
    |||||||||| ||||||| |||| || |||||||||||| ||| || |||||| |||||||  ||| |||||||||    
T  27852680 tataattctgaaaattgaatttaacaagttgtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 70 - 193
Target Start/End: Complemental strand, 25142257 - 25142133
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||||||||||||| || |||||| |||||    
T  25142257 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaat 25142158  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || |||| |||||||||||||||||    
T  25142157 taggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 1383545 - 1383667
Alignment:
Q  73 aggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaag 172  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||  ||||| ||||||| |    
T  1383545 aggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattagg 1383644  T
Q  173 ttttgaagttgtaattggttgtt 195  Q
    ||| |||||||||||||||||||    
T  1383645 tttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 357934 - 357809
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| |   ||||| ||||||    
T  357934 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatt 357835  T
Q  170 aagttttgaagttgtaattggttgtt 195  Q
    | |||| |||||||||||||||||||    
T  357834 aggtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 193
Target Start/End: Complemental strand, 3539890 - 3539766
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||| || |||| || |||||||||||||||| |  ||||||  ||||    
T  3539890 ctaaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaat 3539791  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || |||| |||||||||||||||||    
T  3539790 taggtttagaagttgtaattggttg 3539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 25046178 - 25046070
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||  |||| ||||||||||| ||||||| |||| |||    
T  25046178 gattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatt 25046079  T
Q  162 taggaatta 170  Q
    || ||||||    
T  25046078 taagaatta 25046070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 24718127 - 24718041
Alignment:
Q  15 gaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||  ||||||||| ||||||| |||| ||||    
T  24718127 gaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacatatagtaagggtgggactaacattctttaat 24718041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 195
Target Start/End: Complemental strand, 22502050 - 22501897
Alignment:
Q  44 aatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgta 142  Q
    ||||||||||||| ||||    ||| |||||||||||||| ||||||||||||||||||||||||  | ||||||||| |||||  |||| ||||||||     
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22501951  T
Q  143 ggttgtagttatgagaatttagg-aattaagttttgaagttgtaattggttgtt 195  Q
    |||||||||| |  |||||| || ||||| | || |||||||| ||||||||||    
T  22501950 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 195
Target Start/End: Complemental strand, 22509984 - 22509831
Alignment:
Q  44 aatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgta 142  Q
    ||||||||||||| ||||    ||| |||||||||||||| ||||||||||||||||||||||||  | ||||||||| |||||  |||| ||||||||     
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22509885  T
Q  143 ggttgtagttatgagaatttagg-aattaagttttgaagttgtaattggttgtt 195  Q
    |||||||||| |  |||||| || ||||| | || |||||||| ||||||||||    
T  22509884 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 44072622 - 44072518
Alignment:
Q  58 cgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatga 156  Q
    |||| ||| ||||||||||||||||| ||||||||||| ||||||||||| ||||| ||| || ||||||| ||||||| |||||||||||||||| ||     
T  44072622 cgatcgatcaacctaaggtaagggtgagactaactttcactaattctaag-tgtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgg 44072524  T
Q  157 gaattt 162  Q
    ||||||    
T  44072523 gaattt 44072518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 5986237 - 5986137
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||||| ||||||  |||| || |||||||||| ||||| |||| |||    
T  5986237 gattaacctaaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatt 5986138  T
Q  162 t 162  Q
    |    
T  5986137 t 5986137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 21369405 - 21369293
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||    ||| |||||||||||||| ||| | ||||||||||   |  ||||    
T  21369405 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggacaagctttctctaacaatgggttg 21369306  T
Q  111 tataattctgaaa 123  Q
    |||||||||||||    
T  21369305 tataattctgaaa 21369293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 14179669 - 14179758
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||    |||  ||||||||||||| ||||||| |||| ||||    
T  14179669 agagaagagaataatcttgtgagaagaggagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaat 14179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 22260091 - 22259974
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||| ||||||||||||||| ||||||||||| || || |||||| ||||||| |||| || |||||||||||||||| |  |||||| |||||    
T  22260091 ctaaggtaagagtgtgactaactttcactaattctaag-tgcatgattctgaaaattgaatttaacaggttgtaggttgtagtt-taggaatttgggaat 22259994  T
Q  169 taagttttgaagttgtaatt 188  Q
    || | || ||||||||||||    
T  22259993 taggcttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 36841339 - 36841289
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgat 61  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  36841339 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgat 36841289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 14694386 - 14694296
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||  | ||||| || ||||||  |||| |||| ||||||||||||||    
T  14694386 gattaatctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggttgtagtt 14694296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 31521281 - 31521231
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgat 61  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  31521281 cagagaagagaagaatcttgtgagaagaggagcaatcttgtacagtccgat 31521231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 21080968 - 21081021
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  21080968 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 21081021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 21915677 - 21915624
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||| ||||||||||||||||||||||||||||||||||  | |||||||||||    
T  21915677 ctaaagtaagggtgtgactaactttctctaattctaagtattttaattctgaaa 21915624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 25184242 - 25184189
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  25184242 ctaaggtaagggtgagactaactttctctaattctaagtattttaattctgaaa 25184189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 19358951 - 19358820
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||||||||||||||||||| ||||||| ||   ||||||| || | ||| |||||| ||||||| |||| || ||||| |||||||||| || |||||    
T  19358951 gattaacctaaggtaagggtgggactaacctttaataattctgag-tatatgattctgaaaattgaatttaacaagttgtgggttgtagttttgggaatt 19358853  T
Q  162 tagg-aattaagttttgaagttgtaattggttg 193  Q
    | || ||||| | || |||||||||||||||||    
T  19358852 tgggaaattagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 20916419 - 20916369
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgat 61  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||| |||||    
T  20916419 cagagaagagaggaatcttatgagaagaggagcaatcttgtagagctcgat 20916369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 24884453 - 24884399
Alignment:
Q  140 gtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgt 194  Q
    ||||||||||||| ||| ||||| ||||||| |||| ||||||||||||||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 18390229 - 18390326
Alignment:
Q  86 actaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttg 183  Q
    |||||||||||||||||||||||  |||||||||| |||| || |||| || | |||| ||||||||| || |||||| ||||||| | || |||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaacaag-tgtatgttgtagttttgggaatttgggaattaggattagaagttg 18390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 21315475 - 21315528
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  21315475 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 21335265 - 21335318
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  21335265 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21335318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 23610683 - 23610626
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||||||| ||||| |||||||||||  |  ||||||||||| |||||    
T  23610683 taacctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaa 23610626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 18357975 - 18358019
Alignment:
Q  79 gggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||| ||||||||||||||||||||||||  | |||||||||||    
T  18357975 gggtgggactaactttctctaattctaagtattttaattctgaaa 18358019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 18388189 - 18388312
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| ||||||| |||  |||| || |||  ||| ||||||||| |||  |||| || |||||||||||||||| || |||||| |||||    
T  18388189 ctaaggtaagggtgagactaaccttcaataatcctgagta-tatgattctgaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaat 18388287  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || | || ||||||| || ||||||    
T  18388288 tatggttagaagttgcaaatggttg 18388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 408 - 633
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||  |||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  408 cagagaaaagaagaatcttgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 507  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  508 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 607  T
Q  211 ccgttgaatttgtgtagaattgatgt 236  Q
      ||||||||||||||||||||||||    
T  608 aagttgaatttgtgtagaattgatgt 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 42817849 - 42818072
Alignment:
Q  13 gagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgta 112  Q
    |||||||||||||||||||||||| | ||||||||||||||||| ||||    |||  ||||||||||||| |||| |||||||||||||||||||||||    
T  42817849 gagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgta 42817948  T
Q  113 taattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatcc 212  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||| | |||||  ||||||||||||||||||||||||||| ||||||||||||    
T  42817949 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgttaataaagtagaaaatcc 42818048  T
Q  213 gttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||    
T  42818049 gttgaatttgtgtagaattgatgt 42818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 19140870 - 19140659
Alignment:
Q  17 agagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataat 116  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  19140870 agagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta-ctttctctaattctaagttgtataat 19140772  T
Q  117 tctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttg 216  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19140771 tctgaaattgagtttagcaagttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 19140672  T
Q  217 aatttgtgtagaa 229  Q
    |||||||||||||    
T  19140671 aatttgtgtagaa 19140659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 71 - 245
Target Start/End: Original strand, 20083638 - 20083812
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatta 170  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaatta 20083737  T
Q  171 agttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatctcat 245  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  20083738 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgttcatatcat 20083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 66 - 236
Target Start/End: Complemental strand, 5761590 - 5761421
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttagg 165  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||    
T  5761590 taacctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 5761492  T
Q  166 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5761491 aattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 5082226 - 5082377
Alignment:
Q  85 gactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgt 184  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  5082226 gactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgt 5082325  T
Q  185 aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082326 aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5082377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 6573060 - 6573221
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||| | |||    
T  6573060 gtaagggtgagactaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggtt 6573159  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6573160 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 6573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 39935947 - 39936175
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||||||||||| |||||||| | || || ||||||||||| ||||    |||  ||||||||||||| || |||||||||||||||||||||||    
T  39935947 cagagaagagaagaatcatgtgagaagaagaacagtcttgtagagtccgatcatctaatttaaggtaagggtgggattaactttctctaattctaagttg 39936046  T
Q  111 tataattctgaaattgattttagcatgtt---gtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaa 207  Q
    ||||||| ||||||||| |||||||||||   |||||||||||||||| ||||||  |||||| ||||||||||||||||| ||||||||||||||||||    
T  39936047 tataattatgaaattgagtttagcatgttgttgtaggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgttaatagagtagaa 39936146  T
Q  208 aatccgttgaatttgtgtagaattgatgt 236  Q
    ||||||||||||||||||| |||||||||    
T  39936147 aatccgttgaatttgtgtacaattgatgt 39936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 6202824 - 6202664
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||| |||    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 6202725  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  6202724 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 6202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 6101752 - 6101918
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||| |||||     
T  6101752 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttgggaatc 6101851  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | ||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  6101852 aggttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattgatgt 6101918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 37292753 - 37292593
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||  |||||| |||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 37292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 20178593 - 20178704
Alignment:
Q  135 atgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttgtgtagaattga 233  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  20178593 atgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 20178692  T
Q  234 tgtccatctcat 245  Q
    ||| ||| ||||    
T  20178693 tgttcatatcat 20178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 20397509 - 20397656
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||     || || ||| ||||||    
T  20397509 ctaaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgt-----tgtgattttgggaatt 20397599  T
Q  170 aagttttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttgtgt 225  Q
    | ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  20397600 aggttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 18761559 - 18761448
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| |||||||||||||||||||||||| ||    
T  18761559 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggt 18761460  T
Q  112 ataattctgaaa 123  Q
    ||||||||||||    
T  18761459 ataattctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 22532131 - 22532292
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||  || || ||||||    
T  22532131 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatt 22532230  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    | ||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||||    
T  22532231 aggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22532292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 22536816 - 22536977
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||  || || ||||||    
T  22536816 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatt 22536915  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    | ||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||||    
T  22536916 aggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22536977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 45469218 - 45469342
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| || |||| || |||||||||| ||||| ||  ||||| |||||    
T  45469218 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaat 45469317  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || |||| |||||||||||||||||    
T  45469318 tatgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 17906834 - 17906929
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagt 151  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || |||||||||||||||    
T  17906834 ttcgatcgattaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagt 17906929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 31722492 - 31722661
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||| || |||| || |||| || |||||||||||||||| || |||||| | |||    
T  31722492 ctaagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaat 31722591  T
Q  169 taagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcca 239  Q
    |  |||| ||||||||||||||||| |   ||||||| ||||| ||||||||  ||||||||| |||||||    
T  31722592 ttggtttagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaattaatgtcca 31722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 39694272 - 39694437
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttagg 165  Q
    |||||||| ||||||| ||||||| |||||||||||| |||||||||| ||||||||| ||  |||| || |||||||||||||||| || |||||| ||    
T  39694272 taacctaatgtaagggcgtgactagctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttggg 39694371  T
Q  166 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    ||||| | || || ||||||||| |||||    | |||||| |||| |||||||| ||||||||||    
T  39694372 aattagggttagacgttgtaattagttgtcgtaatagtagagaatctgttgaattggtgtagaatt 39694437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 23889866 - 23889784
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgt 138  Q
    |||||| |||||||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||| |||| |||||    
T  23889866 ttcgatcgattaacctaagctaagggtgagattaactttctctaattctaggttgtataattctgaaattgaatttaacatgt 23889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 36306109 - 36306019
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    ||| |||||||||||||| ||||| |||||||||||    
T  36306109 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 4380612 - 4380669
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4380612 taacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 19700221 - 19700121
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||| | ||| |  |||| ||||||||||||||||||| |||| |||    
T  19700221 gattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagttttgaggatt 19700122  T
Q  162 t 162  Q
    |    
T  19700121 t 19700121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 20022039 - 20022131
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| || |||| || |||||||||||||||| || |||||    
T  20022039 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttgggaatt 20022131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 152
Target Start/End: Original strand, 36727037 - 36727120
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||  |||| || ||||||||||||||||    
T  36727037 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtt 36727120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 21579146 - 21579236
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||||||||||| |||| ||||    
T  21579146 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaaccttctttaat 21579236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 23899972 - 23900069
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagtt 152  Q
    |||||| ||| || |||||||||||||||||||||||||||||||||||||||  ||||| ||||| |||||| |||| || |||||||| |||||||    
T  23899972 ttcgatcgatcaatctaaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagtt 23900069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 22254833 - 22254741
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttg 147  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||||  |||||||||| ||||||  |||| || |||||||||||    
T  22254833 ttcgatcgattaacctaaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttg 22254741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 22317910 - 22318033
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || ||| ||||||||||||  | |||||| ||| |    
T  22317910 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggatt 22318008  T
Q  169 taagttttgaagttgtaattggttg 193  Q
    || |||| |||||||||||||||||    
T  22318009 taggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 22583652 - 22583727
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgt 138  Q
    ||||||||||||||||||||| || |||| |||| |||||||| ||||||||||||||||||||| |||| |||||    
T  22583652 gattaacctaaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaatttaacatgt 22583727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 23419497 - 23419411
Alignment:
Q  67 aacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagtt 152  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||  |||| ||| ||||||| |||||||    
T  23419497 aacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagtt 23419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 22258249 - 22258353
Alignment:
Q  14 agaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtat 113  Q
    ||||||||||||||||||||||| | |||||||||||||| || ||||    |||  ||||||||||||| ||||| |||||||||||  | ||||||||    
T  22258249 agaagagaagaatcttgtgagaagaagagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtat 22258348  T
Q  114 aattc 118  Q
    |||||    
T  22258349 aattc 22258353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 23943766 - 23943866
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| || |    |||  ||||||||||||| |  || ||||||||||||||||||||    
T  23943766 cagagaagagaagaattttgtgagaagaggagcaatcttgtagagtccggtcatctaatttaaggtaagggtgggtatagctttctctaattctaagttg 23943865  T
Q  111 t 111  Q
    |    
T  23943866 t 23943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 23948323 - 23948233
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||||||||||||||||||  |||||| |||| |||||||||||||||| |||||| ||| ||  |||| || ||||||||||||||||    
T  23948323 gattaacctaaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagtt 23948233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 36305903 - 36305837
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 141  Q
    |||||||||||| ||||||||| ||||| || ||||||||||| ||||||||| |||||||||||||    
T  36305903 gtaagggtgtgattaactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 26454761 - 26454708
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  26454761 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 26454708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 36732407 - 36732464
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  36732407 taacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaa 36732464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 108
Target Start/End: Original strand, 17158962 - 17159000
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagt 108  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  17158962 ctaaggtaagggtgggactaactttctctaattctaagt 17159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 23479135 - 23479097
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagt 108  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  23479135 ctaaggtaagggtgggactaactttctctaattctaagt 23479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 17218754 - 17218649
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||| |||||||| ||||||||||||||| ||||||||  |||||||||| |||||   |||||||  ||||||||||| ||| |||| ||||  |||||    
T  17218754 taagataagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgagaatt 17218655  T
Q  170 aagttt 175  Q
    | ||||    
T  17218654 aggttt 17218649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 18834533 - 18834444
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||| |||||||||||||||||| ||| |||||||||||| |  ||||    |||  ||||||||||||| ||||| |||||||||||    
T  18834533 agagaaaagaagaatcttgtgagaagaggggcaatcttgtagtgcccgatcatctaatttaaggtaagggtgggactagctttctctaat 18834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 19880875 - 19880838
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaag 107  Q
    |||||||||||||| |||||||||||||||||||||||    
T  19880875 ctaaggtaagggtgggactaactttctctaattctaag 19880838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 34758915 - 34758875
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataa 115  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  34758915 gtaagggtgggactaactttctctaattctacgttgtataa 34758875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 22208360 - 22208269
Alignment:
Q  32 gagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||| ||||||||||| ||||||  ||||    ||| |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  22208360 gagaagaggagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 29762808 - 29762858
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgat 61  Q
    |||||||||  ||||||||||||||| | ||||||||||||||||| ||||    
T  29762808 cagagaagaagagaatcttgtgagaagaagagcaatcttgtagagtccgat 29762858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 12577932 - 12577880
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| |||||||||||||||||  | ||||||||||||| ||||    
T  12577932 ctaaggtaagggtgggactaactttctctaataat-agttgtataattccgaaa 12577880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 22610266 - 22610315
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||| |||||||||||||||||  | |||||||| |||||    
T  22610266 ctaaggtaagggtgggactaactttctctaataatgagttgtatgattct 22610315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 25657513 - 25657566
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||| ||||||||| || |||||||||||||||||||||  | |||||||||||    
T  25657513 ctaaagtaagggtgggagtaactttctctaattctaagtattttaattctgaaa 25657566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 42265559 - 42265631
Alignment:
Q  121 aaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttg 193  Q
    ||||||| |||| || |||||||||||||||| || |||||| ||||||| | || ||||||| || ||||||    
T  42265559 aaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 42265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 1316 - 1092
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||| || |||||| ||||||| | ||||    |||  ||||||||||||| |||||||||||||||||||||||||||    
T  1316 agagaagagaagaatcttgtgagaagagtagcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 1217  T
Q  112 ataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatc 211  Q
    |||||||||||||||| ||||||||||||||||||||||||||   ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  1216 ataattctgaaattgagtttagcatgttgtaggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgttaatagaatagaaaatc 1117  T
Q  212 cgttgaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||||||    
T  1116 cgttgaatttgtgtagaattgatgt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 34450 - 34226
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||| || |||||| ||||||||| ||||    |||  ||||||||||||| |||||||||||||||||||||| ||||    
T  34450 agagaagagaagaatcttgtgagaagagtagcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaatttgt 34351  T
Q  112 ataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatc 211  Q
     ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||     
T  34350 ttaattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgttaatagagtagaaaatt 34251  T
Q  212 cgttgaatttgtgtagaattgatgt 236  Q
     ||||||||||||||||||||||||    
T  34250 tgttgaatttgtgtagaattgatgt 34226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 6009 - 5921
Alignment:
Q  64 attaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  6009 attaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagtt 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 191 - 25
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||| ||||||    
T  191 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatt 92  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  91 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 571 - 405
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | ||||    
T  571 ctaaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaatt 472  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  471 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 21738 - 21958
Alignment:
Q  16 aagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataa 115  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    |||  |||||||| |||| |||||| |||||||||||||||||||||||     
T  21738 aagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatag 21837  T
Q  116 ttctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgtt 215  Q
    |||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| |||||  |||    
T  21838 ttctgaaattgaatttagcatgttgtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtaaaaaataagtt 21937  T
Q  216 gaatttgtgtagaattgatgt 236  Q
    |||||||||||||||||||||    
T  21938 gaatttgtgtagaattgatgt 21958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 58827 - 58877
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgat 61  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  58827 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgat 58877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 139; Significance: 8e-73; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 3235 - 3069
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| ||||||    
T  3235 ctaaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttgggaatt 3136  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3135 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 2558 - 2451
Alignment:
Q  129 tttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 228  Q
    ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T
Q  229 attgatgt 236  Q
    ||||||||    
T  2458 attgatgt 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 143663 - 143498
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||| |||||||    
T  143663 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttgggaatta 143564  T
Q  171 agttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  143563 tgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 64 - 236
Target Start/End: Original strand, 168992 - 169164
Alignment:
Q  64 attaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaattta 163  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||     
T  168992 attatcctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 169091  T
Q  164 ggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    ||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  169092 ggaattaggttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 169164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 174333 - 174243
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| |||| ||||    
T  174333 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaagtaagggtgggactaaccttctttaat 174243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 64 - 236
Target Start/End: Original strand, 689 - 861
Alignment:
Q  64 attaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaattta 163  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||     
T  689 attatcctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttg 788  T
Q  164 ggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  789 ggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 1218 - 1052
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||    
T  1218 ctaaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaatt 1119  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1118 aggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 13391 - 13557
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || |||||| ||||||    
T  13391 ctaaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttgggaatt 13490  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13491 aggttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 5432 - 5270
Alignment:
Q  74 ggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagt 173  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||| ||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  174 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattgatgt 5270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 12534 - 12693
Alignment:
Q  72 aaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaa 171  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||     
T  12534 aaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattag 12633  T
Q  172 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12634 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaatt 12693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 146776 - 146610
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  146776 ctaaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 146677  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  146676 aggttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattgatgt 146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 75 - 222
Target Start/End: Complemental strand, 7485050 - 7484903
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| |||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 7484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 21300043 - 21300209
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||  |||||    
T  21300043 ctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtaggtagtagttatgggaatttgagaatt 21300142  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    | |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  21300143 aggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtagaattgatgt 21300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 20566599 - 20566445
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||    
T  20566599 ctaaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatg--------ggaatt 20566508  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 232  Q
    | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  20566507 aggttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaattg 20566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 85 - 236
Target Start/End: Complemental strand, 19921676 - 19921525
Alignment:
Q  85 gactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgt 184  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||  ||||| ||||||| ||||||||||| |    
T  19921676 gactacctttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtaattatggaaatttgggaattaggttttgaagttat 19921577  T
Q  185 aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  19921576 aattagttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 19921525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 220
Target Start/End: Complemental strand, 31622170 - 31622028
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| || ||||||||||||||| || ||||||||||||||||||||| ||||||||||||| | |||||        ||||| ||||||    
T  31622170 ctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgta--------aatttgggaatt 31622079  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 220  Q
    | |||||||||| |||||||||||||||||||||||||||||| |||||||    
T  31622078 aggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatt 31622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 36508633 - 36508757
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatta 170  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||  ||||| |||||||    
T  36508633 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttgggaatta 36508732  T
Q  171 agttttgaagttgtaattggttgtt 195  Q
     |||| |||||||||||||||||||    
T  36508733 tgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 26762514 - 26762424
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| ||||    
T  26762514 cagagaagaaaagaatcttgtgagaagagaagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 26762424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 23199148 - 23199259
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| ||||    |||  ||||||||||||| ||||| |||||||||||  |  |||||    
T  23199148 agagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgt 23199247  T
Q  112 ataattctgaaa 123  Q
    ||||||||||||    
T  23199248 ataattctgaaa 23199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 21398584 - 21398674
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    ||| |||||||||||||| || || |||||||||||    
T  21398584 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggattagctttctctaat 21398674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 189
Target Start/End: Original strand, 21617913 - 21618047
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattct-gaaattgattttagcatgttgtaggttgtagttat 154  Q
    |||||| ||| || |||||||||||||| ||||||||||||||||||||||||  ||||| |||  ||||||| |||| || |||||||||||||||| |    
T  21617913 ttcgatcgataaatctaaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagtttt 21618012  T
Q  155 gagaatttaggaattaagttttgaagttgtaattg 189  Q
    | ||||||  |||||| | || ||||||| |||||    
T  21618013 gggaatttgagaattagggttagaagttgaaattg 21618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 6551289 - 6551342
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6551289 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 31457013 - 31456888
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| |||||||||||||||||| ||||| |||| ||||||||| ||  |||| ||    ||||||||||||| ||  ||||| | ||||    
T  31457013 ctaaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaatt 31456914  T
Q  170 aagttttgaagttgtaattggttgtt 195  Q
    | |||| |||||||||||||||||||    
T  31456913 aggtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 10954145 - 10954060
Alignment:
Q  67 aacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagtt 152  Q
    ||||||||||||||||| ||||||| |||  |||||||||||||| ||||| ||||||||  |||| ||||||||||| |||||||    
T  10954145 aacctaaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagtt 10954060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 20469161 - 20469258
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||| ||| || |||||||||||||| ||||||||||||||||||||||||  ||||| |||| ||||||  |||| || ||||||||||||||||    
T  20469161 ttcgatcgatcaatctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagtt 20469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 25249820 - 25249915
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgag 157  Q
    ||||||||||||||||||||  ||||||| |||| ||||| |||||| |||||||||| ||||||  |||| ||||||||||||| ||||| ||||    
T  25249820 gattaacctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagttttgag 25249915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 25313604 - 25313699
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgag 157  Q
    ||||||||||||||||||||  ||||||| |||| ||||| |||||| |||||||||| ||||||  |||| ||||||||||||| ||||| ||||    
T  25313604 gattaacctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagttttgag 25313699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 21405613 - 21405751
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttat 154  Q
    |||||| ||||||||||||||||||||| ||||||| ||   ||||||| || | ||| |||||| ||||||| |||| || ||||| |||||||||| |    
T  21405613 ttcgatcgattaacctaaggtaagggtgagactaacctttaataattctgag-tatatgattctgaaaattgaatttaacaggttgtgggttgtagtttt 21405711  T
Q  155 gagaatttagg-aattaagttttgaagttgtaattggttg 193  Q
    | |||||| || ||||| | || |||||||||||||||||    
T  21405712 gggaatttgggaaattagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 22111876 - 22111810
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 141  Q
    ||||||||| || ||||||||||||||| |  ||||||||||| ||||||||| |||||||||||||    
T  22111876 gtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgt 22111810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 17011781 - 17011728
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  17011781 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 17011728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 30616663 - 30616614
Alignment:
Q  74 ggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaa 30616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 266090 - 266038
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  266090 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 266038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 10774663 - 10774771
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| ||||||| ||| ||||||||||| ||||| |||||| ||||||| |||| |||| ||||| |||||||| || |||||  |||||    
T  10774663 ctaaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaat 10774760  T
Q  169 taagttttgaa 179  Q
    || | ||||||    
T  10774761 tagggtttgaa 10774771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 17876186 - 17876132
Alignment:
Q  140 gtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgt 194  Q
    ||||||||||||| ||| ||||| ||||||| |||| ||||||||||||||||||    
T  17876186 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 18744927 - 18744874
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| |||||||||||||||||  |  |||||||||||||||||    
T  18744927 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 18744874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 22111764 - 22111715
Alignment:
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 224  Q
    ||||||| |||||||||||||||||||| |||||||||  ||||||||||    
T  22111764 ttgaagtcgtaattggttgttaatagagcagaaaatccaatgaatttgtg 22111715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 29448893 - 29448840
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    ||||||||| | || ||||||||||||||||||||||||  | |||||||||||    
T  29448893 ctaaggtaatgatgagactaactttctctaattctaagtaatttaattctgaaa 29448840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 31251931 - 31252011
Alignment:
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggt 191  Q
    ||||||||||||||||  |||| || ||| |||||||||||| |  ||||||  |||||| |||| |||||| ||||||||    
T  31251931 tataattctgaaattggatttaacaggttataggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 122; Significance: 1e-62; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 236
Target Start/End: Original strand, 328283 - 328455
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattct--aagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaattta 163  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||| || |||||||||||  |||||     
T  328283 taacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatggaaatttg 328382  T
Q  164 ggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 236  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  328383 ggaattaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattgatgt 328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 224
Target Start/End: Complemental strand, 75834 - 75691
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| || ||||||||||||||  || ||||||||||||||||||||| | ||||||||||| | |||||  | || |||||| ||||||| |||    
T  75834 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaattaggtt 75735  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 224  Q
          ||||||||||||||||||||| |||||||||| |||||||||||    
T  75734 ------ttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 226
Target Start/End: Complemental strand, 72980 - 72841
Alignment:
Q  79 gggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttga 178  Q
    ||||| || |||||||||| |||  || ||||||||||||| ||||||| ||||| ||||||| | | ||        ||||||  |||||| |||||||    
T  72980 gggtgggattaactttctccaatcttaggttgtataattctaaaattgagtttagtatgttgttgttagt--------gaatttgtgaattaggttttga 72889  T
Q  179 agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  72888 agttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 110222 - 110144
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagtt 152  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||| ||||||| |||| || ||||||||||||||||    
T  110222 gtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagtt 110144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 73139 - 73091
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||| |||||||||||||||||  | |||||||| |||||    
T  73139 taaggtaagggtgggactaactttctctaataatgagttgtatgattct 73091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 24071 - 24235
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  24071 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 24170  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttt 175  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  24171 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 79161 - 78955
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||||||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  79161 cagagaagataagaattttgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 79062  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||||||||||| |||||||||||       |||||||||        ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  79061 tataattctgaaattgagtttagcatgtt-------gtagttatg--------ggaattaggttttgaagttgtaattggttgttaataaagtagaaaat 78977  T
Q  211 ccgttgaatttgtgtagaattg 232  Q
    || |||||||||||||||||||    
T  78976 ccattgaatttgtgtagaattg 78955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 78125 - 78298
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||| ||||    |||  ||||||||||||| ||||||||||||||||||||||||||    
T  78125 cagataagagaataatcttgtgagaagaggagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 78224  T
Q  111 tataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgt 184  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||| | ||||| |||||||||||||    
T  78225 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 29572 - 29711
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||| ||||||    
T  29572 ctaaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttgggaatt 29671  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    | ||||||||||||||||||||||| ||||| |||||||||    
T  29672 aggttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 21664 - 21539
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||| |||| ||  |||| ||  | |||| |||||||| ||  ||||| ||||||    
T  21664 ctaaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttgggaatt 21565  T
Q  170 aagttttgaagttgtaattggttgtt 195  Q
    | |||| |||||||||||||||||||    
T  21564 atgtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 2666 - 2520
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||  ||||    ||| ||| |||||||||| |||||||||||||||||||||||||||    
T  2666 agagaagagaagaatcttgtgagaagaggagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgt 2567  T
Q  112 ataattctgaaattgattttagcatgttgtaggttgtagttatgaga 158  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||    
T  2566 ataattctgaaattgagtttagcatgttgtaggttgtagttatnaga 2520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 19806 - 19652
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||||| |||||||| |||        |||||| ||||||    
T  19806 ctaaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgt--------gaatttgggaatt 19715  T
Q  170 aagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 232  Q
    | ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19714 aggtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaattg 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 70 - 197
Target Start/End: Complemental strand, 35543 - 35418
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| || |||||| ||||||    
T  35543 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttgggaatt 35446  T
Q  170 aagttttgaagttgtaattggttgttaa 197  Q
    | |||||||||| |||||||||||||||    
T  35445 aggttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 19316 - 19207
Alignment:
Q  14 agaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgat-taacctaaggtaagggtgtgactaactttctctaattctaagttgta 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| ||| ||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  19316 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgat-gatctaatctaacgtaagggtgggactaactttctctaattctaagttgta 19218  T
Q  113 taattctgaaa 123  Q
    |||||||||||    
T  19217 taattctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 56 - 231
Target Start/End: Original strand, 112951 - 113127
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa--ttgattttagcatgttgtaggttgtagtta 153  Q
    |||||| ||| || ||||| |||||||| ||||||||||||||||||||||||  ||||| |||||||  |||| |||| || ||||||||||||| ||     
T  112951 ttcgatcgatcaatctaagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattt 113050  T
Q  154 tgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    || |||||| ||||||| |||| ||||||||||||||||||| | | ||||||||||  |||||||| ||||||||||    
T  113051 tgggaatttgggaattaggtttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtagaatt 113127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 81619 - 81501
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattct-gaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    ||||||||||||| ||||||| ||| ||||||||||  || || |||||  ||||||| |||| || |||||||||||||||| || |||||| ||||||    
T  81619 taaggtaagggtgggactaaccttcactaattctaa-atggatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 81521  T
Q  170 aagttttgaagttgtaattg 189  Q
    | |||| |||||||||||||    
T  81520 aggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 231
Target Start/End: Original strand, 117792 - 117960
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg--aaattgattttagcatgttgtaggttgtagtta 153  Q
    |||||| ||| || |||||||||||||| ||||||||||||||||||||||||  ||||| ||||  ||||||| |||| || |||| || |||||        
T  117792 ttcgatcgataaaactaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgta---- 117887  T
Q  154 tgagaatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
        | ||| ||||||| |||| ||||||||||||||||||| | | |||||||||||  ||||||| | ||||||||    
T  117888 ----attttgggaattaggtttagaagttgtaattggttgttta-acagtagaaaatctattgaattggcgtagaatt 117960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  74 ggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagt 173  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||  ||||||||||||| ||    
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 6787  T
Q  174 tttgaagttgtaattggttgtt 195  Q
    || |||||||||||||||||||    
T  6788 ttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 10386 - 10476
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| ||||    
T  10386 cagagaagagaataatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 10476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 3986 - 3901
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttct 96  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  3986 cagagaagagaagaatcttgtgagaagatgagcaatcttatagagttcgatcgattaacctaaggtaagggtgtgaccaaccttct 3901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 2942 - 2787
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| || ||||||||||||||| || ||||||||||||||||||||| ||||||||||||| | ||||        ||||||  |||||    
T  2942 ctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtgaatt 2851  T
Q  170 aagttttgaagttgt-aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 232  Q
    | |||||||| | || ||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  2850 aggttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgtataattg 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 10750 - 10913
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttagg 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||  |||| || |||||||||| ||||| || |||||| ||    
T  10750 taacctaaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttggg 10847  T
Q  166 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 231  Q
    ||||| | || |||||||||||||||||||   | |||||| ||||  ||||||| ||||||||||    
T  10848 aattagggttagaagttgtaattggttgttgtaatagtagagaatctattgaattggtgtagaatt 10913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 5040 - 5120
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggtt 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||  |||| || ||||||||||    
T  5040 taacctaaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaagttgtaggtt 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 1990 - 1937
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||| ||||||| |||||||||| |||||||||||||  | |||||||||||    
T  1990 ctaaggaaagggtgggactaactttatctaattctaagtattttaattctgaaa 1937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 12001 - 11921
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaac 91  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||||||    
T  12001 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaagataagggtgagactaac 11921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 5310 - 5167
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| || ||||||||||||||  || ||||||||||||||||||||| ||| ||||||||| | ||||        |||||| ||||||| |||    
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattacgtt 5219  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 11430 - 11287
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| || ||||||||||||||  || ||||||| ||||||||||||| ||| ||||||||| | ||||        |||||| ||||||| |||    
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattaggtt 11339  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 11287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 19754 - 19605
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||| ||| || ||| ||||||||||  || ||| ||||||||||||||||| ||||||||||||| | ||||   | || ||||||  |||||| |||    
T  19754 gtaagtgtgggattaaatttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaattaggtt 19655  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgt 225  Q
     |||||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  19654 atgaagttgtaattgattgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 5507 - 5454
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  5507 ctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

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Target: scaffold0074 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 2050 - 1957
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattct 104  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||||||||||| ||||||| |||  |||||||    
T  2050 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattatgctaaggtaagggtgggactaaccttcaataattct 1957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 60955 - 60855
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    |||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||| |||    
T  60955 gattaacctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatt 60856  T
Q  162 t 162  Q
    |    
T  60855 t 60855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 1057 - 1226
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| |||||||||||||| |||||||||  |||||||||| ||||||| |||| || ||||||||||| |||| ||||||||| ||| |    
T  1057 ctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagttttgagaatttgggatt 1156  T
Q  169 taagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcca 239  Q
    || | || |||||||||||| |||| |   ||||||| ||||| ||||||||  ||||||| | |||||||    
T  1157 tagggttagaagttgtaattagttgatttaagagtag-aaatctgttgaattgatgtagaaataatgtcca 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 20021 - 19924
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagtt 152  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||  |||| || ||||||||||||||||    
T  20021 ttcgatcgattaacctaaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt 19924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 195
Target Start/End: Original strand, 106050 - 106175
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||  |||| || || ||||  ||||||| ||  ||||| ||||||    
T  106050 ctaaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttgggaatt 106149  T
Q  170 aagttttgaagttgtaattggttgtt 195  Q
    | |||| || ||||||||||||||||    
T  106150 aggtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 5000 - 4892
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| | |||  |||| ||||||||||| ||||||| |||| |||    
T  5000 gattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagttttgaggatt 4901  T
Q  162 taggaatta 170  Q
    || ||||||    
T  4900 taagaatta 4892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 398622 - 398514
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||||| |||||  |||| ||||||||||| ||||||| |||| |||    
T  398622 gattaacctaaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatt 398523  T
Q  162 taggaatta 170  Q
    || ||||||    
T  398522 taagaatta 398514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 7340 - 7205
Alignment:
Q  60 attgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgaga 158  Q
    ||||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||| ||||||  |||  ||||||||||||| ||||| || ||    
T  7340 attgattaacctaaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttggga 7241  T
Q  159 atttag-gaattaagttttgaagttgtaattggttg 193  Q
    |||| |  ||||| | || |||||||||||||||||    
T  7240 atttggaaaattagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 191
Target Start/End: Original strand, 4708 - 4830
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| ||||    |||||| | |||    
T  4708 ctaaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaat 4807  T
Q  169 taagttttgaagttgtaattggt 191  Q
    || |||| |||||||| ||||||    
T  4808 taggtttagaagttgtcattggt 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 195
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  77 aagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtttt 176  Q
    ||||||| |||||| ||| |||||||||||||||||| ||||||||| ||  |||| ||||| ||||||||||||| ||  ||||| | ||||| ||||     
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggttta 16551  T
Q  177 gaagttgtaattggttgtt 195  Q
    |||||||||||||||||||    
T  16550 gaagttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 3053 - 3174
Alignment:
Q  72 aaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaatta 170  Q
    |||||||||||| ||||||| |||  ||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| || ||||||||||||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaatta 3151  T
Q  171 agttttgaagttgtaattggttg 193  Q
     | || |||||||||||||||||    
T  3152 gggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 135500 - 135625
Alignment:
Q  67 aacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttagg 165  Q
    ||||||||||||||||| ||||||| ||| ||||||||||| |||||||||||| ||||||| |||| || |||||||||||||||| || |||||| ||    
T  135500 aacctaaggtaagggtgggactaaccttcactaattctaag-tgtataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttggg 135598  T
Q  166 aattaagttttgaagttgtaattggtt 192  Q
    |||||   || ||||||| ||||||||    
T  135599 aattagagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 222
Target Start/End: Original strand, 26633 - 26779
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||| ||||||||| || ||||||||| ||||| || ||||||||||||||||| |||| ||||||||||||| | ||||        |||||| |||||    
T  26633 ctaaagtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgt--------gaatttgggaat 26724  T
Q  169 taagttttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttg 222  Q
    || |||||||| | |||||| |||||||||||||||||||||||| |||||||||    
T  26725 taggttttgaattagtaatttggttgttaatagagtagaaaatccattgaatttg 26779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 5745 - 5633
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||    |||  ||||||||||||| ||||| |||||||||||  |  ||||    
T  5745 cagagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttg 5646  T
Q  111 tataattctgaaa 123  Q
    |||||||||||||    
T  5645 tataattctgaaa 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 20073 - 20202
Alignment:
Q  58 cgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatga 156  Q
    |||| ||| ||||||||||||||| | ||||||| ||| ||||||||||| |||||||||||| ||||||| |||| || |||||||||| ||||| ||     
T  20073 cgatcgatcaacctaaggtaagggcgggactaaccttcactaattctaag-tgtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgg 20170  T
Q  157 gaatttaggaattaagttttgaagttgtaatt 188  Q
    |||||| ||||||| |||| ||||||||||||    
T  20171 gaatttgggaattatgtttagaagttgtaatt 20202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 126297 - 126395
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaattt 162  Q
    |||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||  |||| || ||||||| |||||||| |||| ||||    
T  126297 gattaagctaaggtaagg-tgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggattt 126395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 141
Target Start/End: Original strand, 1831 - 1917
Alignment:
Q  56 ttcgattgattaac-ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 141  Q
    |||||| ||||||| |||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  1831 ttcgatcgattaacactaaggtgtgggtgggactaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 2195 - 2252
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  2195 taacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 17939 - 17992
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17939 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 193
Target Start/End: Complemental strand, 8695 - 8571
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttagg-aa 167  Q
    |||||||||||||| ||||||| ||| ||||||||||| ||||| |||||| ||||||| |||| || |||||||||||||||| || |||||| || ||    
T  8695 ctaaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaa 8597  T
Q  168 ttaagttttgaagttgtaattggttg 193  Q
    ||| | || |||||||||||||||||    
T  8596 ttagggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 61847 - 61900
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  61847 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 4445 - 4345
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    |||||||||||||||| | || ||||||| |||| |||||||||||||||||||||||| || ||  |||| ||||||||||||||||||| |||| |||    
T  4445 gattaacctaaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatt 4346  T
Q  162 t 162  Q
    |    
T  4345 t 4345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 10846 - 10741
Alignment:
Q  75 gtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagtt 174  Q
    ||||||||| || ||||||||||||||| || ||||||||||||||||||||| ||||||||||||| | ||||        |||||| ||||||| |||    
T  10846 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgggaattaggtt 10755  T
Q  175 ttgaagttgtaatt 188  Q
    ||||||||||||||    
T  10754 ttgaagttgtaatt 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 11059 - 11016
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtaga 54  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  11059 cagagaagagaagaatcttgtgagaagaggagcaatcttgtaga 11016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 23832 - 23922
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||    |||   |||||||||||| ||||| |||||||||||    
T  23832 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaattcaaggtaagggtgagactagctttctctaat 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 5300 - 5353
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  5300 taacctaaggtaagggtgggactaactttctctaattttaagttgtataattct 5353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 15325 - 15272
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  15325 ctaaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15272  T

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Target: scaffold0041 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  76 taagggtgtgactaactttctctaattctaagttgtataattctgaaatt 125  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

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Target: scaffold0065 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 52536 - 52636
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    |||||||||||| |||||||| ||||||| |||  |||||||||||||| ||||||||| |||||  |||| ||||||||||| ||||||| |||| |||    
T  52536 gattaacctaagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatt 52635  T
Q  162 t 162  Q
    |    
T  52636 t 52636  T

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Target: scaffold0056 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 183
Target Start/End: Complemental strand, 67184 - 67060
Alignment:
Q  60 attgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgaga 158  Q
    |||||| || ||||||||| |||| ||||||||||||||||||| |||| ||||||||||| ||||||  |||| ||  ||||||||||||||| |  ||    
T  67184 attgatcaatctaaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttagga 67085  T
Q  159 atttaggaattaagttttgaagttg 183  Q
    |||| ||||| | |||| |||||||    
T  67084 atttgggaataaggtttagaagttg 67060  T

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Target: scaffold0056; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 18332 - 18275
Alignment:
Q  66 taacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  18332 taacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaa 18275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 174
Target Start/End: Complemental strand, 29448 - 29336
Alignment:
Q  63 gattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatt 161  Q
    ||||||||||||||||||||| ||||||  |||| |||||||||||||||| |||||| ||| ||  |||| || |||||||||||||||| || | |||    
T  29448 gattaacctaaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatt 29349  T
Q  162 taggaattaagtt 174  Q
    |  ||||||||||    
T  29348 tgagaattaagtt 29336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 2021 - 2143
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||| |||||||| || |||| ||| |||||||||||| |||| ||| ||||| |||| |||| ||||||||||||||||||| ||  ||||| ||||||    
T  2021 taagctaagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaatt 2119  T
Q  170 aagttttgaagttgtaattggttg 193  Q
    | ||||  ||||||||||||||||    
T  2120 aggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 5846 - 5913
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||| |||||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||    
T  5846 ttcgatcgattaacctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaa 5913  T

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Target: scaffold0003 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 157
Target Start/End: Complemental strand, 96451 - 96364
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgag 157  Q
    |||| |||| |||| |||||||||||||||||||| |||||||| ||||||||| ||  |||| || |||||||||||||||| ||||    
T  96451 ctaaagtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagttttgag 96364  T

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Target: scaffold0261 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 6620 - 6686
Alignment:
Q  158 aatttaggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 224  Q
    ||||| ||||||| ||||||| || ||||||||||||||||||||||||| ||||  ||||||||||    
T  6620 aatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaagatccaatgaatttgtg 6686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 5082 - 5029
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  5082 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 9013 - 8960
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  9013 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 5082 - 5029
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  5082 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 21150 - 21097
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  21150 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 21097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 34165 - 34112
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  34165 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 34112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 69852 - 69905
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  69852 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 69905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 2396 - 2506
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgt 111  Q
    |||||||||| |||||||||||||| || |||||||||||| ||| |||     |||  ||||||||||||| ||||| |||||||||||  |  |||||    
T  2396 agagaagagaggaatcttgtgagaagag-agcaatcttgtaaagtccgaacatctaatttaaggtaagggtgggactagctttctctaataatgggttgt 2494  T
Q  112 ataattctgaaa 123  Q
    ||||||||||||    
T  2495 ataattctgaaa 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 31175 - 31062
Alignment:
Q  56 ttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttat 154  Q
    |||||| ||||||||||||||||||||| ||||||| |||  ||||||| || | | |||||||| ||||||  |||| || |||||||||||||||| |    
T  31175 ttcgatcgattaacctaaggtaagggtgggactaaccttcaataattctgag-tatgtaattctgaaaattggatttaacaagttgtaggttgtagtt-t 31078  T
Q  155 gagaatttaggaatta 170  Q
    | |||||| |||||||    
T  31077 gggaatttgggaatta 31062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 13493 - 13572
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaac 91  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||| ||||    |||  ||||||||||||| |||||||    
T  13493 agagaagagaagaatcttgtgagaagaggattaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaac 13572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 5419 - 5311
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| ||||||| ||| ||||||||||| ||||| |||||| ||||||| |||| |||| ||||| |||||||| || |||||  |||||    
T  5419 ctaaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaat 5322  T
Q  169 taagttttgaa 179  Q
    || | ||||||    
T  5321 tagggtttgaa 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 196 - 233
Alignment:
Q  71 taaggtaagggtgtgactaactttctctaattctaagt 108  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  196 taaggtaagggtgggactaactttctctaattctaagt 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 29215 - 29268
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||| ||| ||||||||||||||||||||||||  | |||||||||||    
T  29215 ctaaggtaagagtgggactaactttctctaattctaagtattttaattctgaaa 29268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 26776 - 26727
Alignment:
Q  74 ggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||| || ||||||||||||||| || |||||||||||||||||    
T  26776 ggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 26727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 12403 - 12323
Alignment:
Q  115 attctgaaattgattttagcatg-ttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttgt 194  Q
    ||||||||||||| |||| |||| ||||||||||||||| ||  |||||  |||||| |||| ||||||||||| ||||||    
T  12403 attctgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 28662 - 28618
Alignment:
Q  12 agagaagagaagaatcttgtgagaaaaggagcaatcttgtagagt 56  Q
    |||||||| || ||||||||||||| |||||||||||||||||||    
T  28662 agagaagaaaataatcttgtgagaagaggagcaatcttgtagagt 28618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 4718 - 4612
Alignment:
Q  86 actaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgta 185  Q
    |||||| ||| ||||| |||||| |||| ||||| ||||||| |||| || ||| |||||||| ||| || ||||||  |||||| |||| |||||||||    
T  4718 actaaccttcactaatcctaagt-gtatgattctaaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgta 4620  T
Q  186 attggttg 193  Q
    ||| ||||    
T  4619 attagttg 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 2960 - 2881
Alignment:
Q  44 aatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||  |||   |||| |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  2960 aatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 30705 - 30615
Alignment:
Q  72 aaggtaagggtgtgactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtaggttgtagttatgagaattt 162  Q
    |||||||||||| ||||||| |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| ||||| |||||||||    
T  30705 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgagaattt 30615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 11100 - 11190
Alignment:
Q  11 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagttcgattgattaacctaaggtaagggtgtgactaactttctctaat 101  Q
    ||||||||||||||||||| |||||| || ||||||||| ||| || ||||    |||  |||||||||| || ||||| |||||||||||    
T  11100 cagagaagagaagaatcttctgagaagagaagcaatcttttagtgtccgatcacctaatttaaggtaaggatgggactagctttctctaat 11190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 6421 - 6383
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagt 108  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  6421 ctaatgtaagggtgggactaactttctctaattctaagt 6383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 108
Target Start/End: Original strand, 21776 - 21814
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagt 108  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  21776 ctaaggtaaggatgggactaactttctctaattctaagt 21814  T

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Target: scaffold1186 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 2073 - 2020
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  2073 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 2020  T

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Target: scaffold0577 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 9112 - 9004
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtaggttgtagttatgagaatttaggaatt 169  Q
    |||||||||||||| ||||||| |||  ||||||| |||  | ||||||||||| ||  |||| || |||||||||||||||| |  |||||| ||||||    
T  9112 ctaaggtaagggtgggactaaccttcagtaattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagtttttggaatttgggaatt 9014  T
Q  170 aagttttgaa 179  Q
    | | ||||||    
T  9013 agggtttgaa 9004  T

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Target: scaffold0462 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 11276 - 11223
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| | ||||||||||||||||| ||||  | |||||||||||    
T  11276 ctaaggtaagggtgagtctaactttctctaattccaagtattttaattctgaaa 11223  T

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Target: scaffold0061 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 14585 - 14638
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  14585 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14638  T

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Target: scaffold0061; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 23643 - 23696
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  23643 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 23696  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 198
Target Start/End: Original strand, 158821 - 158949
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtaggttgtagttatgagaatttaggaat 168  Q
    |||||||||||||| ||||||| |||  ||||||| |||  ||| ||||| ||| |||  |||| || |||||||||||||||| || |||||| |||||    
T  158821 ctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctaaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaat 158919  T
Q  169 taagttttgaagttgtaattggttgttaat 198  Q
    || | || ||||||| || |||||| ||||    
T  158920 tagggttagaagttgcaaatggttgataat 158949  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 186195 - 186248
Alignment:
Q  70 ctaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 123  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  186195 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 186248  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 35514 - 35586
Alignment:
Q  121 aaattgattttagcatgttgtaggttgtagttatgagaatttaggaattaagttttgaagttgtaattggttg 193  Q
    ||||||| |||| ||  ||||||||||||||| || |||||| ||||||||| || ||||||| || ||||||    
T  35514 aaattgaatttaacaacttgtaggttgtagttttgggaatttgggaattaaggttagaagttgcaaatggttg 35586  T

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