View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6875A_low_288 (Length: 222)
Name: NF6875A_low_288
Description: NF6875A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6875A_low_288 |
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Alignment Details
Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 27856598 - 27856794
Alignment:
| Q |
10 |
tgtcgaacaatatacaaagcaacattaagggaaaaactacacactgcaaatgattcatgagtatattacatatgaattgattttctgagtcacatattac |
109 |
Q |
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| T |
27856598 |
tgtcgaagaaaatacaaagcaacattaagggaaaaactacacactgcaaatgattcatgagtatattacatatgaattgattttctgagtcacatattac |
27856697 |
T |
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| Q |
110 |
caatgtaagacaattcagaggcatgatcaagtagatatattacctttggagaaattcaatgtgaaagttggttgatcagatccaagataattgatgt |
206 |
Q |
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| T |
27856698 |
caatgtaagacaattcagaggcatgatcaagtagatatattacctttggagaaattcaatgtgaaagttggttgatcagatccaagataattgatgt |
27856794 |
T |
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