View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6875A_low_317 (Length: 203)
Name: NF6875A_low_317
Description: NF6875A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6875A_low_317 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 22443590 - 22443401
Alignment:
| Q |
10 |
tgtcgaagaatataggacactggcactccctggatatgcgtcccaaaagtacccaaatatattttattttacgaattattattatgataatttgcaagta |
109 |
Q |
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| T |
22443590 |
tgtcgaaccatataggacactggcactccctggatatgcgtcccaaaagtacccaaatatattttattttacgaattattattatgataatttgcaagta |
22443491 |
T |
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| Q |
110 |
cttcccaataacgcacagatacttttctatattgagatacttgtaggatactaacaatgtttttattttaagttcttccgaagacacttttgc |
202 |
Q |
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| T |
22443490 |
cttcccaataacgcacagatacttttctatattgagatacttgtaggatactaacaatgttttttttttaag---ttccgaagacacttttgc |
22443401 |
T |
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