View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6875A_low_88 (Length: 312)

Name: NF6875A_low_88
Description: NF6875A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6875A_low_88
NF6875A_low_88
[»] chr6 (23 HSPs)
chr6 (36-229)||(13727317-13727510)
chr6 (36-229)||(21280540-21280733)
chr6 (36-229)||(21479489-21479683)
chr6 (36-229)||(20711638-20711831)
chr6 (36-229)||(27788608-27788799)
chr6 (36-228)||(33774112-33774305)
chr6 (36-230)||(17353949-17354143)
chr6 (36-229)||(30832443-30832635)
chr6 (36-148)||(19737691-19737803)
chr6 (36-230)||(24710913-24711110)
chr6 (36-215)||(28075778-28075960)
chr6 (49-227)||(1155767-1155947)
chr6 (67-229)||(27314097-27314259)
chr6 (40-148)||(34397856-34397964)
chr6 (39-215)||(235157-235334)
chr6 (45-141)||(2477590-2477686)
chr6 (45-141)||(6159442-6159538)
chr6 (45-136)||(21183686-21183777)
chr6 (45-140)||(20611794-20611889)
chr6 (46-124)||(4036953-4037031)
chr6 (62-147)||(30121783-30121868)
chr6 (170-215)||(19987277-19987322)
chr6 (47-91)||(27994775-27994819)
[»] chr2 (35 HSPs)
chr2 (36-229)||(4505885-4506078)
chr2 (36-230)||(3155208-3155402)
chr2 (36-226)||(6964998-6965186)
chr2 (36-230)||(12337364-12337559)
chr2 (36-229)||(8906996-8907190)
chr2 (36-229)||(29939781-29939973)
chr2 (36-230)||(26716119-26716314)
chr2 (36-229)||(3952997-3953188)
chr2 (36-229)||(7162775-7162967)
chr2 (36-229)||(27506659-27506851)
chr2 (36-226)||(10762488-10762676)
chr2 (36-229)||(9046020-9046213)
chr2 (42-229)||(24410434-24410623)
chr2 (71-225)||(40636164-40636317)
chr2 (61-226)||(34693991-34694155)
chr2 (61-226)||(34716403-34716567)
chr2 (71-223)||(5952642-5952791)
chr2 (45-148)||(16097008-16097111)
chr2 (116-229)||(1396617-1396730)
chr2 (47-148)||(24035544-24035645)
chr2 (45-146)||(38400798-38400899)
chr2 (45-148)||(13800543-13800647)
chr2 (45-148)||(12134039-12134142)
chr2 (45-148)||(21665699-21665802)
chr2 (45-148)||(28425709-28425812)
chr2 (45-148)||(7742132-7742236)
chr2 (101-213)||(8327674-8327785)
chr2 (45-147)||(16227368-16227470)
chr2 (45-213)||(11912691-11912859)
chr2 (45-114)||(37182670-37182739)
chr2 (51-119)||(22727530-22727598)
chr2 (68-147)||(42029168-42029247)
chr2 (107-148)||(22727456-22727497)
chr2 (91-147)||(11952588-11952643)
chr2 (101-140)||(10252472-10252511)
[»] chr7 (42 HSPs)
chr7 (36-229)||(18776683-18776876)
chr7 (36-229)||(29077212-29077404)
chr7 (36-226)||(8171460-8171649)
chr7 (36-229)||(12596207-12596397)
chr7 (36-230)||(20091196-20091391)
chr7 (40-230)||(10329326-10329516)
chr7 (66-229)||(26254015-26254178)
chr7 (36-229)||(23550988-23551181)
chr7 (36-229)||(10955476-10955671)
chr7 (44-229)||(19692094-19692279)
chr7 (36-229)||(38414793-38414986)
chr7 (49-229)||(28749715-28749895)
chr7 (36-229)||(47984885-47985080)
chr7 (36-229)||(24525599-24525795)
chr7 (36-229)||(48983756-48983954)
chr7 (43-227)||(8239686-8239869)
chr7 (36-230)||(25010425-25010612)
chr7 (230-312)||(12507286-12507368)
chr7 (230-312)||(12485854-12485936)
chr7 (230-312)||(12658172-12658254)
chr7 (48-147)||(9021799-9021898)
chr7 (67-147)||(33162338-33162418)
chr7 (45-148)||(2611260-2611363)
chr7 (48-140)||(23859077-23859169)
chr7 (45-148)||(7398452-7398555)
chr7 (231-311)||(12504963-12505043)
chr7 (56-147)||(6765680-6765771)
chr7 (45-140)||(36891579-36891674)
chr7 (56-148)||(23744808-23744900)
chr7 (45-140)||(12981327-12981422)
chr7 (45-148)||(27237421-27237524)
chr7 (161-223)||(40357303-40357365)
chr7 (231-311)||(12483533-12483613)
chr7 (49-140)||(20153206-20153297)
chr7 (48-146)||(36902924-36903022)
chr7 (45-148)||(12419493-12419596)
chr7 (61-147)||(21763586-21763672)
chr7 (45-141)||(18201138-18201234)
chr7 (45-133)||(9014782-9014863)
chr7 (46-124)||(38971255-38971333)
chr7 (91-147)||(9014177-9014233)
chr7 (59-99)||(40357413-40357453)
[»] chr5 (46 HSPs)
chr5 (36-217)||(34756293-34756474)
chr5 (36-229)||(36187795-36187987)
chr5 (36-229)||(27079003-27079197)
chr5 (36-229)||(15480006-15480197)
chr5 (36-229)||(38869279-38869471)
chr5 (36-226)||(30854321-30854511)
chr5 (36-229)||(16591990-16592182)
chr5 (36-225)||(19523191-19523380)
chr5 (36-224)||(2274882-2275070)
chr5 (36-229)||(16198709-16198902)
chr5 (49-229)||(31194528-31194706)
chr5 (36-215)||(9364283-9364462)
chr5 (44-229)||(22986473-22986658)
chr5 (36-228)||(28822253-28822450)
chr5 (40-229)||(16799240-16799431)
chr5 (36-215)||(27924074-27924253)
chr5 (36-230)||(7670916-7671119)
chr5 (36-143)||(40389537-40389644)
chr5 (42-148)||(23284058-23284164)
chr5 (49-229)||(31881348-31881528)
chr5 (66-215)||(7338021-7338170)
chr5 (47-148)||(36868872-36868973)
chr5 (45-147)||(14318382-14318484)
chr5 (48-148)||(2024638-2024738)
chr5 (45-140)||(2530901-2530996)
chr5 (45-148)||(34425904-34426007)
chr5 (48-140)||(26718953-26719045)
chr5 (48-140)||(26988697-26988789)
chr5 (45-148)||(1366522-1366625)
chr5 (45-148)||(33037781-33037884)
chr5 (45-147)||(2412089-2412191)
chr5 (46-140)||(24395741-24395835)
chr5 (47-148)||(10407464-10407565)
chr5 (53-140)||(10543682-10543769)
chr5 (45-148)||(11242314-11242417)
chr5 (45-148)||(40794323-40794426)
chr5 (56-146)||(22648734-22648824)
chr5 (45-147)||(41911614-41911716)
chr5 (101-148)||(606211-606258)
chr5 (164-215)||(40389467-40389518)
chr5 (45-125)||(15639644-15639724)
chr5 (161-229)||(23283943-23284011)
chr5 (57-141)||(17344969-17345053)
chr5 (104-148)||(27530543-27530587)
chr5 (105-141)||(22875003-22875039)
chr5 (108-148)||(35080766-35080806)
[»] chr3 (37 HSPs)
chr3 (36-229)||(54619121-54619314)
chr3 (36-229)||(38681011-38681204)
chr3 (36-229)||(27078486-27078680)
chr3 (36-229)||(27084283-27084477)
chr3 (36-229)||(47467679-47467872)
chr3 (36-230)||(36715941-36716136)
chr3 (43-234)||(8073252-8073442)
chr3 (36-229)||(21582766-21582960)
chr3 (36-230)||(34290553-34290747)
chr3 (43-229)||(42098803-42098989)
chr3 (36-225)||(37168362-37168551)
chr3 (36-228)||(3953816-3954007)
chr3 (36-230)||(43207156-43207348)
chr3 (36-225)||(44708472-44708660)
chr3 (49-226)||(36605973-36606149)
chr3 (36-226)||(53149235-53149425)
chr3 (36-229)||(53506802-53506995)
chr3 (36-217)||(18372474-18372658)
chr3 (40-229)||(50258542-50258731)
chr3 (36-229)||(50939152-50939344)
chr3 (36-229)||(54407073-54407268)
chr3 (36-191)||(9878644-9878798)
chr3 (36-112)||(29620423-29620499)
chr3 (45-148)||(54574826-54574929)
chr3 (50-140)||(28689368-28689458)
chr3 (45-140)||(8420330-8420425)
chr3 (40-215)||(48157138-48157302)
chr3 (45-140)||(32319162-32319257)
chr3 (167-229)||(29620364-29620426)
chr3 (50-147)||(49393099-49393195)
chr3 (45-147)||(25855426-25855527)
chr3 (62-148)||(26279563-26279649)
chr3 (161-230)||(48720428-48720497)
chr3 (85-136)||(23641329-23641380)
chr3 (45-147)||(789940-790042)
chr3 (88-148)||(42453451-42453511)
chr3 (45-148)||(52374660-52374763)
[»] chr8 (36 HSPs)
chr8 (36-229)||(2952137-2952332)
chr8 (36-226)||(30883321-30883512)
chr8 (36-229)||(3048435-3048628)
chr8 (36-229)||(45475809-45476001)
chr8 (36-226)||(13534609-13534797)
chr8 (36-226)||(13624149-13624337)
chr8 (36-229)||(23606548-23606740)
chr8 (36-229)||(23798179-23798372)
chr8 (36-229)||(42600774-42600967)
chr8 (36-217)||(5860672-5860855)
chr8 (44-229)||(37430076-37430261)
chr8 (36-229)||(41879173-41879364)
chr8 (36-230)||(10917383-10917576)
chr8 (45-148)||(7944521-7944624)
chr8 (45-140)||(8102913-8103008)
chr8 (45-148)||(5973106-5973209)
chr8 (45-148)||(11290185-11290288)
chr8 (45-147)||(39332405-39332507)
chr8 (45-125)||(5942697-5942777)
chr8 (45-148)||(15167414-15167517)
chr8 (45-139)||(5721560-5721654)
chr8 (45-148)||(41677172-41677276)
chr8 (45-140)||(15078759-15078854)
chr8 (45-140)||(25561502-25561595)
chr8 (50-148)||(34789861-34789959)
chr8 (53-148)||(8646215-8646309)
chr8 (161-229)||(20003728-20003796)
chr8 (68-147)||(30674403-30674482)
chr8 (45-147)||(14509983-14510084)
chr8 (102-147)||(9108551-9108596)
chr8 (68-141)||(23941097-23941170)
chr8 (101-140)||(34868184-34868223)
chr8 (48-147)||(34048705-34048806)
chr8 (87-117)||(5757123-5757153)
chr8 (197-229)||(33963268-33963300)
chr8 (108-148)||(38009151-38009191)
[»] chr1 (43 HSPs)
chr1 (36-229)||(44655744-44655936)
chr1 (36-229)||(14146303-14146495)
chr1 (36-230)||(5316683-5316876)
chr1 (36-229)||(23185430-23185622)
chr1 (36-230)||(5027552-5027747)
chr1 (36-229)||(17168959-17169151)
chr1 (36-229)||(6771794-6771989)
chr1 (36-226)||(50881433-50881621)
chr1 (36-230)||(3406421-3406615)
chr1 (36-230)||(3440205-3440399)
chr1 (36-229)||(4971536-4971728)
chr1 (36-223)||(16140058-16140244)
chr1 (36-229)||(27906646-27906827)
chr1 (36-230)||(19955720-19955913)
chr1 (36-229)||(9172940-9173133)
chr1 (36-229)||(9180922-9181115)
chr1 (36-229)||(40501707-40501900)
chr1 (36-212)||(41697072-41697247)
chr1 (54-230)||(21740851-21741029)
chr1 (36-148)||(27559640-27559752)
chr1 (36-214)||(1366812-1366988)
chr1 (35-213)||(51607374-51607551)
chr1 (56-229)||(6889634-6889805)
chr1 (56-229)||(6891480-6891651)
chr1 (68-229)||(22865378-22865538)
chr1 (36-226)||(13913401-13913592)
chr1 (45-147)||(38547035-38547137)
chr1 (50-148)||(38853539-38853637)
chr1 (45-148)||(39134720-39134824)
chr1 (36-213)||(44895655-44895827)
chr1 (45-148)||(45758506-45758609)
chr1 (47-148)||(5533326-5533428)
chr1 (161-223)||(34247154-34247216)
chr1 (58-140)||(35392295-35392376)
chr1 (45-147)||(26803960-26804059)
chr1 (45-148)||(50146308-50146411)
chr1 (45-140)||(43235774-43235871)
chr1 (45-141)||(33170771-33170867)
chr1 (85-148)||(17322621-17322684)
chr1 (45-147)||(6221690-6221791)
chr1 (48-148)||(10925951-10926052)
chr1 (195-232)||(52127457-52127494)
chr1 (59-99)||(34247066-34247106)
[»] chr4 (57 HSPs)
chr4 (36-217)||(38209520-38209701)
chr4 (36-232)||(54780774-54780971)
chr4 (36-225)||(47128984-47129172)
chr4 (36-229)||(34768492-34768684)
chr4 (36-215)||(43455463-43455641)
chr4 (36-230)||(32915382-32915576)
chr4 (36-229)||(32128581-32128774)
chr4 (36-229)||(34027576-34027768)
chr4 (35-229)||(2790659-2790852)
chr4 (44-213)||(37777156-37777325)
chr4 (36-229)||(10978897-10979092)
chr4 (36-225)||(1105529-1105717)
chr4 (36-232)||(10428113-10428315)
chr4 (36-229)||(55255266-55255447)
chr4 (36-229)||(48209237-48209436)
chr4 (36-229)||(5128758-5128952)
chr4 (36-229)||(54083160-54083352)
chr4 (36-230)||(16845018-16845211)
chr4 (36-229)||(19498501-19498691)
chr4 (36-232)||(40089513-40089717)
chr4 (36-230)||(37514656-37514849)
chr4 (36-138)||(13460204-13460306)
chr4 (71-229)||(17679432-17679589)
chr4 (36-226)||(35779248-35779435)
chr4 (36-229)||(16882313-16882505)
chr4 (36-217)||(35465104-35465283)
chr4 (36-215)||(38352197-38352365)
chr4 (67-226)||(51964736-51964897)
chr4 (45-214)||(52468292-52468459)
chr4 (66-229)||(16922245-16922409)
chr4 (45-127)||(4167910-4167992)
chr4 (85-148)||(51691913-51691976)
chr4 (93-229)||(23508427-23508564)
chr4 (36-148)||(24969434-24969536)
chr4 (45-141)||(27112036-27112132)
chr4 (45-141)||(36118463-36118559)
chr4 (75-148)||(9578662-9578736)
chr4 (51-141)||(36178684-36178774)
chr4 (68-148)||(39655252-39655332)
chr4 (45-148)||(10041998-10042101)
chr4 (45-148)||(24396940-24397043)
chr4 (36-98)||(23509846-23509908)
chr4 (45-141)||(2135326-2135422)
chr4 (46-214)||(39329325-39329492)
chr4 (45-139)||(37744916-37745011)
chr4 (53-148)||(36362869-36362964)
chr4 (45-141)||(45656181-45656277)
chr4 (45-134)||(40217238-40217327)
chr4 (161-229)||(24969718-24969786)
chr4 (158-213)||(2975358-2975413)
chr4 (174-229)||(13460305-13460360)
chr4 (104-147)||(24614018-24614061)
chr4 (106-148)||(30507120-30507162)
chr4 (89-133)||(29425187-29425231)
chr4 (91-138)||(15735142-15735189)
chr4 (180-229)||(9578575-9578624)
chr4 (85-133)||(11906904-11906952)
[»] scaffold0070 (1 HSPs)
scaffold0070 (36-229)||(1335-1527)
[»] scaffold0039 (1 HSPs)
scaffold0039 (36-230)||(106530-106724)
[»] scaffold1590 (1 HSPs)
scaffold1590 (45-148)||(257-360)
[»] scaffold0012 (1 HSPs)
scaffold0012 (45-140)||(206496-206591)
[»] scaffold0018 (1 HSPs)
scaffold0018 (45-141)||(173516-173612)
[»] scaffold0097 (1 HSPs)
scaffold0097 (45-141)||(38926-39022)
[»] scaffold0007 (1 HSPs)
scaffold0007 (46-148)||(230858-230960)
[»] scaffold0182 (1 HSPs)
scaffold0182 (47-147)||(23993-24093)
[»] scaffold0001 (2 HSPs)
scaffold0001 (90-229)||(183106-183244)
scaffold0001 (36-94)||(181911-181969)
[»] scaffold1320 (1 HSPs)
scaffold1320 (45-140)||(1355-1450)
[»] scaffold0022 (2 HSPs)
scaffold0022 (45-148)||(40086-40191)
scaffold0022 (45-148)||(138146-138251)
[»] scaffold0227 (2 HSPs)
scaffold0227 (102-147)||(16123-16168)
scaffold0227 (45-112)||(16028-16095)
[»] scaffold0003 (1 HSPs)
scaffold0003 (68-121)||(351360-351413)


Alignment Details
Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 13727510 - 13727317
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13727510 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 13727411  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||        |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  13727410 acattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 13727317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 21280540 - 21280733
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21280540 ttaggtgggagttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 21280639  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||        |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  21280640 acattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 21280733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 21479489 - 21479683
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21479489 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 21479588  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||  ||||||||||    
T  21479589 acattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccaaattctcagagacggccctg 21479683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 20711831 - 20711638
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20711831 ttagatgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 20711732  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         || ||||||||||||| ||||||||||||||||| | ||| ||||||||||||||||||| ||||| |||||    
T  20711731 acattgctcttttaaaaaaaaatacgttttgattttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacgtccctg 20711638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 27788799 - 27788608
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27788799 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 27788700  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    | |||||||||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | |||||||||||    
T  27788699 aaattgctcttttaaaaaaa--tacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 27788608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 228
Target Start/End: Original strand, 33774112 - 33774305
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33774112 ttaggtgggggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 33774211  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 228  Q
    ||||| |||||||         ||||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||| ||| ||||||    
T  33774212 acattactcttttaaaaaaaaattatgttttgattttattactggcctcttttcattttcagagccgagcctccgaattctcaaggatggccct 33774305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 17353949 - 17354143
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  17353949 ttaggtgggggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 17354048  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||||||| ||||         || ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||||    
T  17354049 acattgctttttttaaaaaaaatacgttttgattttatcactgacctcttttcattccaagagtcgagcctccgaattcttagggacggccctgt 17354143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 30832635 - 30832443
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  30832635 ttaggtgggggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgtaaataga 30832536  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||| || |||||         || |||||||||||||||||| |||||||||||| | |||||||||||| |||||||||| |||||||||||    
T  30832535 acatcgcgctttttaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagccttcgaattctcagggacggccctg 30832443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 19737803 - 19737691
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19737803 ttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatataaataga 19737704  T
Q  136 acattgctctttt 148  Q
    |||||||||||||    
T  19737703 acattgctctttt 19737691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 24711110 - 24710913
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24711110 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaataga 24711011  T
Q  136 acattgctcttt---tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    ||||  ||||||              | ||||||||||||||||| ||||||||||||| |  |||| ||||||||||||||||| ||||||||||||    
T  24711010 acatcactctttaaaaaaaaaaaaaaacgttttgattttatcactaacctcttttcattccctgagctgagcctccgaattctcagggacggccctgt 24710913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 36 - 215
Target Start/End: Original strand, 28075778 - 28075960
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28075778 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatataaataga 28075877  T
Q  136 acattgctcttt---tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
    |||||||| |||             || ||||||||||| |||||| |||||||||||| | |||||||||||||| ||||||    
T  28075878 acattgctttttaaaataaaaaaaatacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 28075960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 227
Target Start/End: Complemental strand, 1155947 - 1155767
Alignment:
Q  49 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt- 147  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||     
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttta 1155848  T
Q  148 -tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 227  Q
              |||  |||||||||||||||||||||||||||||| | ||| |||||||||| |||| | | |||||||||    
T  1155847 aaaaaaaaaattactttttgattttatcactgacctcttttcattcctagaaccgagcctccaaatttttagggacggccc 1155767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 67 - 229
Target Start/End: Complemental strand, 27314259 - 27314097
Alignment:
Q  67 cattttcacctctgggtataccgcatatatacggcaccttgtatttatc-ttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgtttt 165  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         || |||||    
T  27314259 cattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tacgtttt 27314161  T
Q  166 gattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||||||||| |||||||||||| | |||| |||||||||||||| ||| |||||||||||    
T  27314160 gattttatcactggcctcttttcattcccagagtcgagcctccgaattttcagggacggccctg 27314097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 34397856 - 34397964
Alignment:
Q  40 gtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 139  Q
    |||| |||||||||||| |||| |||||||||| |||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34397856 gtggaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatataaatagaacat 34397955  T
Q  140 tgctctttt 148  Q
    |||||||||    
T  34397956 tgctctttt 34397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 215
Target Start/End: Complemental strand, 235334 - 235157
Alignment:
Q  39 ggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatac--ggcaccttgtatttatcttttaaaaaatataaatagaa 136  Q
    |||||||||| ||||||||||||||||||||||||| || ||||| ||| | ||||||||  |||||||| ||||||||||||||||||||||||||||     
T  235334 ggtgggggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaatataaatagat 235235  T
Q  137 cattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
    ||||||| ||||         || ||||||||||||||||||  |||||||||||   | |||||| ||||||||||||    
T  235234 cattgct-ttttaaaaaaaaatacgttttgattttatcactggtctcttttcattctcatagccgaacctccgaattct 235157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 2477686 - 2477590
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    |||||||||||||||||||||| |||||||| | | ||| || |||||||||| | |||||||||||||||||||||||||| ||||| ||||||||    
T  2477686 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 2477590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 6159442 - 6159538
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    ||||||| || ||||||||||| |||| ||||| ||  | ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  6159442 ggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaacattg 6159538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 21183777 - 21183686
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 136  Q
    |||||||||||||||||||||| ||||||| || ||||| |||| ||||||||||  || |||||||||||||||||||||| |||||||||    
T  21183777 ggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 20611794 - 20611889
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||||||||||||||| |||||||||| ||| | |  || ||||||||| ||||||||||||||| |||||||||| ||| |||||||||    
T  20611794 ggttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacatt 20611889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 4036953 - 4037031
Alignment:
Q  46 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaa 124  Q
    ||||||||| ||||||||||| || || |||| ||||| ||||  |||||||||||||||||||||||||| |||||||    
T  4036953 gttcctcatatatacggtagtgatctttacctttgggtgtaccatatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 30121783 - 30121868
Alignment:
Q  62 gtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    ||||| |||||||||| ||| | || |||||||||| | |||||||||||||| ||||||||||| |||||| ||||||| |||||    
T  30121783 gtagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacattgttcttt 30121868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 19987277 - 19987322
Alignment:
Q  170 ttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
    ||||||||||||||||||||||   |||||||| ||||||||||||    
T  19987277 ttatcactgacctcttttcattctgagagccgatcctccgaattct 19987322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 27994775 - 27994819
Alignment:
Q  47 ttcctcatgtatacggtagtcattttcacctctgggtataccgca 91  Q
    |||||||||||||||||||| |||||||||| || || |||||||    
T  27994775 ttcctcatgtatacggtagtgattttcacctttgagtgtaccgca 27994819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 3e-79; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 4505885 - 4506078
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4505885 ttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 4505984  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||        |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  4505985 acattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 4506078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 3155208 - 3155402
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3155208 ttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 3155307  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||||||||||||        ||||||||| ||||||||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||    
T  3155308 acattgctcttttaaaaaaaattatgttttaattttatcactgacctcttttcatttttaaagccgagcctccgaattctcagggacggccctgt 3155402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 36 - 226
Target Start/End: Original strand, 6964998 - 6965186
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6964998 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaataga 6965097  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |||||||||||||        |||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  6965098 acattgctcttttaaaaaaaatta--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 6965186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 12337559 - 12337364
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  12337559 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatataaataga 12337460  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||||||||||||         |||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  12337459 acattgctcttttaaaaaaaaattatattttgattttatcactggcctcttttcatttccagagccgagccttcgaattctcagggacggccctgt 12337364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 8907190 - 8906996
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8907190 ttaggtgggggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatataaataga 8907091  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||| |||||||         |||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| | |||||||||    
T  8907090 acattactcttttaaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcaggaacggccctg 8906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 29939973 - 29939781
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  29939973 ttaggtggtggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatataaataga 29939874  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         || ||||||||||||||||||||||||||| ||| | |||||||||||| |||||||||| |||||| ||||    
T  29939873 acattgctcttttaaaaaaaa-tacgttttgattttatcactgacctctttttattcccagagccgagccttcgaattctcagggacggtcctg 29939781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 26716119 - 26716314
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaatataaatag 134  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| |||||||||||| |||||||||||||||    
T  26716119 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaatag 26716218  T
Q  135 aacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    ||||||||||||||         || ||||||||||||||||||||||||||||||| | | |||||||||  |||||||| | ||||||||||||    
T  26716219 aacattgctcttttaaaaaaaaatacgttttgattttatcactgacctcttttcattcccaaagccgagccaacgaattcttagggacggccctgt 26716314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 3952997 - 3953188
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3952997 ttaggtgggggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatataaataga 3953096  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||| | |||||          ||  |||||||||||||||||||||||||||||||| | |||||||||||| |||||||| ||||| |||||    
T  3953097 acatcggtcttt--aaaaaaaatacattttgattttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacgaccctg 3953188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 7162775 - 7162967
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7162775 ttaggtaggggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 7162874  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||| ||||||||          |  |||| |||||||||||| |||||||||||| |  |||| |||||| |||| ||||| |||||||||||    
T  7162875 acatcgctcttttaaaaaaaa-gacattttaattttatcactggcctcttttcattccccgagctgagccttcgaaatctcagggacggccctg 7162967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 27506851 - 27506659
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||| ||||||||||||||| ||||||||||| |||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  27506851 ttaggtgggagttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaataga 27506752  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
     ||||||| ||||         || |||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | |||||||||||    
T  27506751 tcattgct-tttttttaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccctg 27506659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 36 - 226
Target Start/End: Complemental strand, 10762676 - 10762488
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  10762676 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatataaataga 10762577  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    ||||||||||||           | ||||| |||||||||||| |||||||||||| | ||||| |||||||| |||||| | ||||||||    
T  10762576 acattgctctttaaaaaaaaa--acgttttaattttatcactggcctcttttcattcccagagctgagcctccaaattcttagggacggcc 10762488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 9046020 - 9046213
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaatataaatag 134  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  9046020 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaatag 9046119  T
Q  135 aacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||| ||||||         || |||||||||||||||||| |||||||| ||| | ||||| |||||  ||||||||   |||||||||||    
T  9046120 aacattgttcttttaaaaacaa-tacgttttgattttatcactggcctcttttaattcccagagctgagccaacgaattctttgggacggccctg 9046213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 24410434 - 24410623
Alignment:
Q  42 gggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24410434 gggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 24410533  T
Q  142 ctcttt--tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
     | |||            || |||||||||||||||||| |||||||||||| | | | ||||||||||||||||| | |||||||||||    
T  24410534 ttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaaaccgagcctccgaattcttagggacggccctg 24410623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 40636164 - 40636317
Alignment:
Q  71 ttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattt 170  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tatgttttgattt 40636262  T
Q  171 tatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 225  Q
    |||||||| |||||||||||| | ||||| ||||||||||||||||| |||||||    
T  40636263 tatcactggcctcttttcattcccagagctgagcctccgaattctcagggacggc 40636317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 34693991 - 34694155
Alignment:
Q  61 ggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttat 160  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||     
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tac 34694089  T
Q  161 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |||||||||||||||| | |||||||||||||| ||| |||| |||||||||||||| ||||||||    
T  34694090 gttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34694155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 34716403 - 34716567
Alignment:
Q  61 ggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttat 160  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||     
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tac 34716501  T
Q  161 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |||||||||||||||| | |||||||||||||| ||| |||| |||||||||||||| ||||||||    
T  34716502 gttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 5952791 - 5952642
Alignment:
Q  71 ttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattt 170  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||         || ||||||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaa--ataaatataacattgctcttttaaaaaaaa-tacgttttgattt 5952695  T
Q  171 tatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacg 223  Q
    ||||| || |||||||||||| | |||||||| |||||||||||||| |||||    
T  5952694 tatcattggcctcttttcattccgagagccgaacctccgaattctcagggacg 5952642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 16097008 - 16097111
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||||||||||| |||||| |||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  16097008 ggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttc 16097107  T
Q  145 tttt 148  Q
    ||||    
T  16097108 tttt 16097111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 1396730 - 1396617
Alignment:
Q  116 ttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  1396730 ttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagtcgagcctccgaattct 1396631  T
Q  216 catggacggccctg 229  Q
    || ||| |||||||    
T  1396630 caaggaaggccctg 1396617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 24035645 - 24035544
Alignment:
Q  47 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 146  Q
    |||||||||||| ||||||| |||||||||| | ||| || ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  24035645 ttcctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctt 24035546  T
Q  147 tt 148  Q
    ||    
T  24035545 tt 24035544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 38400798 - 38400899
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||||||||| |||||||||| ||  | || |||||||||| | |||||||||||||||||||||||||| |||||||||||||| ||    
T  38400798 ggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 38400897  T
Q  145 tt 146  Q
    ||    
T  38400898 tt 38400899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 13800647 - 13800543
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctct-gggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 143  Q
    |||||||| ||||||  ||||| |||||||||| | |||| || ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |    
T  13800647 ggttcctcgtgtatatagtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaacattgtt 13800548  T
Q  144 ctttt 148  Q
    |||||    
T  13800547 ctttt 13800543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 12134142 - 12134039
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||| |||||||||||||| |||||||| | ||||| || ||||||||||||| |||||||||||||||||||||   | |||||||||||||| ||    
T  12134142 ggttcctaatgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacattgttc 12134043  T
Q  145 tttt 148  Q
    ||||    
T  12134042 tttt 12134039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 21665802 - 21665699
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||||||||| |||||||| | | | | || | |||||||||| |||| ||||||||||||||||||||| |||||||||||||| ||    
T  21665802 ggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacattgttc 21665703  T
Q  145 tttt 148  Q
    ||||    
T  21665702 tttt 21665699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 28425812 - 28425709
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||| |||| |||||| |||||||| | ||||| ||| ||||||||||| |||||||||||||||||||||||  | |||||||||||||| ||    
T  28425812 ggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaatttttaaatagaacattgttc 28425713  T
Q  145 tttt 148  Q
    ||||    
T  28425712 tttt 28425709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 7742236 - 7742132
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatagaacattgct 143  Q
    ||||||||||| ||||| ||||  ||||||||| ||| | || |||||||||| | ||| ||||||||||||||||| |||||||||||||||||||| |    
T  7742236 ggttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatataaatagaacattgtt 7742137  T
Q  144 ctttt 148  Q
    |||||    
T  7742136 ctttt 7742132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 8327674 - 8327785
Alignment:
Q  101 caccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagcc 200  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||||        | | ||||||||||||||||||| ||||||||||||| ||| |     
T  8327674 caccttatatttatcttttaaaaaatataaatagatcattgcttttttaaaaaaaat-acgttttgattttatcactgatctcttttcatttccagaact 8327772  T
Q  201 gagcctccgaatt 213  Q
    |||||||||||||    
T  8327773 gagcctccgaatt 8327785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 16227470 - 16227368
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||| |||||||  ||||| ||||||| || | ||| || | |||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||    
T  16227470 ggttccttatgtatatagtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaaaattgttc 16227371  T
Q  145 ttt 147  Q
    |||    
T  16227370 ttt 16227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 213
Target Start/End: Complemental strand, 11912859 - 11912691
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||| |||||||||||||| ||||||| || ||| | ||  ||||||||||||||| |||||||||| ||||   |||| |||||||||||||| ||    
T  11912859 ggttccttatgtatacggtagtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttttttaaatttaaatagaacattgttc 11912760  T
Q  145 ttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaatt 213  Q
    |||          |||||||| ||||||| || ||  |||||||| ||  |||||||||||||||||||    
T  11912759 tttaaaaaaaatatatgtttttattttattacggatatcttttcacttatagagccgagcctccgaatt 11912691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 37182670 - 37182739
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttat 114  Q
    |||||||||||||||||||||| |||||||| | ||||| ||  ||||||||||| ||||||||||||||    
T  37182670 ggttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 22727598 - 22727530
Alignment:
Q  51 tcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt 119  Q
    ||||||||| |||||| |||||||| | ||||| ||||||||||||||| ||| | |||||||||||||    
T  22727598 tcatgtatatggtagtgattttcacttttgggtgtaccgcatatatacgtcacatagtatttatctttt 22727530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 42029168 - 42029247
Alignment:
Q  68 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    |||||||||| | ||| |||  ||| |||| | |||||| ||||||||||||||||||| |||||||||||||| |||||    
T  42029168 attttcacctttaggtgtacaacatgtatatgacaccttatatttatcttttaaaaaatttaaatagaacattgttcttt 42029247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 22727497 - 22727456
Alignment:
Q  107 gtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  22727497 gtatttatcttttaaaaaatttaaatagaacattgttctttt 22727456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 11952643 - 11952588
Alignment:
Q  91 atatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    ||||||||| ||| ||||||| |||||||||||||| |||||||||||||| |||||    
T  11952643 atatatacgacactttgtatt-atcttttaaaaaatttaaatagaacattgttcttt 11952588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 10252472 - 10252511
Alignment:
Q  101 caccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  10252472 caccttgtatttatcttttaaaaaatttaaattgaacatt 10252511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 6e-77; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 18776876 - 18776683
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18776876 ttaggtgggggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 18776777  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||        |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  18776776 acattgctcttttaaaaaaaattatattttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccctg 18776683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 29077212 - 29077404
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29077212 ttaggtgggggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaataga 29077311  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         || ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  29077312 acattgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29077404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 36 - 226
Target Start/End: Complemental strand, 8171649 - 8171460
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8171649 ttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 8171550  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |||||||||||||         || | ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||    
T  8171549 acattgctcttttaaaaaaaa-tacgctttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggcc 8171460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 12596397 - 12596207
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  12596397 ttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatataaataga 12596298  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||| |||||||           | |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  12596297 acatcgctctttaaaaaaaa---acgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 12596207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 20091391 - 20091196
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20091391 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 20091292  T
Q  136 acattg-ctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
     |||||  | ||||         || |||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | ||||||||||||    
T  20091291 tcattgttttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccctgt 20091196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 230
Target Start/End: Complemental strand, 10329516 - 10329326
Alignment:
Q  40 gtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 139  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| | || ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10329516 gtgggggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 10329417  T
Q  140 tgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||| ||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | | ||||||||||    
T  10329416 tgcttttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaggaacggccctgt 10329326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 26254015 - 26254178
Alignment:
Q  66 tcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgtttt 165  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||    
T  26254015 tcattttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaatatgtttt 26254114  T
Q  166 gattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||||||||||||||| | | ||||||||||||||||||||| |||| ||||||    
T  26254115 gattttatcactgacctcttttcattcccaaagccgagcctccgaattctcagggacagccctg 26254178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 23551181 - 23550988
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatag 134  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  23551181 ttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaatataaatag 23551082  T
Q  135 aacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    | ||||||| ||||         ||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | ||||| |||||    
T  23551081 atcattgct-ttttttaaaaaaatatgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacgaccctg 23550988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 10955476 - 10955671
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10955476 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 10955575  T
Q  136 acattgctcttttnnnnnnnnttatgt--tttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||| ||||||||          |     |||||||| ||||||||||||| |||||| |  |||| |||||||||||||||||||||| ||||||    
T  10955576 acatcgctcttttaaaaaaaaaaaaaaaatttgatttaatcactgacctctattcattccccgagctgagcctccgaattctcatggacagccctg 10955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 44 - 229
Target Start/End: Original strand, 19692094 - 19692279
Alignment:
Q  44 gggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 143  Q
    ||||||||||||||||||  |||||||||||||| | ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  19692094 gggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatataaatagaacattgct 19692193  T
Q  144 cttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||         || ||||||||||||||||||  | ||||||||||| |||||||||| |||||||||| | ||| |||||||    
T  19692194 cttttaaaaaaaaatacgttttgattttatcactggacacttttcatttccagagccgagcttccgaattcttagggagggccctg 19692279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 38414986 - 38414793
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||| |||||| |||||||||||||||||||| |||||||    
T  38414986 ttaggtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatacaaataga 38414887  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    || ||||||||||         || ||||||||||||| |||   ||||||||||||| |||| |||||||||||||||| | ||||| |||||    
T  38414886 acgttgctcttttgcaaaaaaatacgttttgattttatgactagtctcttttcatttccagagtcgagcctccgaattcttagggacgaccctg 38414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 28749715 - 28749895
Alignment:
Q  49 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  28749715 cctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctctttt 28749813  T
Q  149 -nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
              |||||||||||||||||| ||  ||||||||||| | ||||||||||||||||||| ||| |||||||||||    
T  28749814 gaaaaaaaaatatgttttgattttatcattggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 28749895  T

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Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 47985080 - 47984885
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatag 134  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  47985080 ttaggtgggggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaatag 47984981  T
Q  135 aacattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||||| ||||           | |||||||||||||||||| | |||||||||| | |||||||||||  |||||||| | |||||||||||    
T  47984980 aacattgcttttttaaaaaaaaaacacgttttgattttatcactggcatcttttcattcccagagccgagccaacgaattcttagggacggccctg 47984885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 24525795 - 24525599
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  24525795 ttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatataaataga 24525696  T
Q  136 acattgctctt---ttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||| | ||              || |||||||||||||||| | |||||||||||| | ||||||||||||||||||||| | ||||| |||||    
T  24525695 acattgtttttaaaaaaaaaaaaaatacgttttgattttatcacaggcctcttttcattcccagagccgagcctccgaattcttagggacgaccctg 24525599  T

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Target: chr7; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 48983954 - 48983756
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  48983954 ttaggtgggggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 48983855  T
Q  136 acattgctctttt-----nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
     ||||| | ||||              || ||||||||||||||| || ||||||||||||   ||||||||||||||||||||| | |||||||||||    
T  48983854 tcattgttttttttaaaaaaaaaaaaatacgttttgattttatcattggcctcttttcattctcagagccgagcctccgaattcttagggacggccctg 48983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 43 - 227
Target Start/End: Original strand, 8239686 - 8239869
Alignment:
Q  43 ggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgc 142  Q
    |||||||||||| ||||||||| |||||||||| | ||||| |||| |||||||||||||| || ||||||| ||||||||||||||||||||||||| |    
T  8239686 ggggttcctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaatataaatagaacattac 8239785  T
Q  143 tcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 227  Q
    ||||||         || ||||| ||||||||| || |||||||||||||| |||||||||||||| |||||| | |||||||||    
T  8239786 tcttttaaaaaaaa-tacgttttcattttatcattggcctcttttcatttccagagccgagcctccaaattcttagggacggccc 8239869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 25010425 - 25010612
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaa--tataaata 133  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||          |||||| ||||||||||||||||||  ||||||||    
T  25010425 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaaaatataaata 25010514  T
Q  134 gaacattgctcttttnnnnnnnnt-tatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    || ||||||| ||||          || |||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  25010515 gatcattgcttttttttttaaaaaatacgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattcttagggacggccctgt 25010612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 12507286 - 12507368
Alignment:
Q  230 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtcgtacctccctgggatgtg 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  12507286 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtggtacctccccgggatgtg 12507368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 12485854 - 12485936
Alignment:
Q  230 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtcgtacctccctgggatgtg 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||    
T  12485854 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtggaacctccccgggatgtg 12485936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 12658172 - 12658254
Alignment:
Q  230 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtcgtacctccctgggatgtg 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||    
T  12658172 tgtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtggaacctccccgggatgtg 12658254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 9021898 - 9021799
Alignment:
Q  48 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||| | |||| |||||    
T  9021898 tcctcatgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatagcaaattgttcttt 9021799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 33162418 - 33162338
Alignment:
Q  67 cattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33162418 cattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgctcttt 33162338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 2611363 - 2611260
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||| || || |||||||||  || || ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  2611363 ggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 2611264  T
Q  145 tttt 148  Q
    ||||    
T  2611263 tttt 2611260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 140
Target Start/End: Original strand, 23859077 - 23859169
Alignment:
Q  48 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    ||||||||||||||||||| ||||||| || ||||| || ||||||||||||| || |||||||||||||||||||||| |||||||||||||    
T  23859077 tcctcatgtatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacatt 23859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 7398452 - 7398555
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||||||||||| |||||| |||||||||| | ||| || | |||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||    
T  7398452 ggttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacattgttc 7398551  T
Q  145 tttt 148  Q
    ||||    
T  7398552 tttt 7398555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 12504963 - 12505043
Alignment:
Q  231 gtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtcgtacctccctgggatgt 311  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||| | |||||||    
T  12504963 gtctactcagtcatgctcatccgtgaccccacattgcccatccgattgttccacctcaaatgtggtacctcaccgggatgt 12505043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 6765771 - 6765680
Alignment:
Q  56 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    ||||||||||| |||||||||| ||| | ||| || |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||    
T  6765771 tatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 6765680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 36891579 - 36891674
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||||||||||||||| |||||||||| ||| | ||||| ||||||||  ||| ||||||| ||| ||||||||||||||||||||||||    
T  36891579 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatataaatagaacatt 36891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 23744808 - 23744900
Alignment:
Q  56 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    ||||||||||| ||||| | || | ||| |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacattgttctttt 23744900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 12981327 - 12981422
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||| ||||| ||||| |||||||||| || || |||||| |||||| || ||||||||||||||||||||||||  |||||||||||||    
T  12981327 ggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacatt 12981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 27237524 - 27237421
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||||||||||||| |||| |||||||||| | | |  | | |||||||||  |||||||||||||||||||||||||| |||||||||||||| ||    
T  27237524 ggttcctcatgtatacgatagtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 27237425  T
Q  145 tttt 148  Q
    ||||    
T  27237424 tttt 27237421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 40357365 - 40357303
Alignment:
Q  161 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacg 223  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  40357365 gttttgattttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacg 40357303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 12483533 - 12483613
Alignment:
Q  231 gtctactctgtcatgctcacccgtgaccccacattgcccatccgaatgttccacctcaaatgtcgtacctccctgggatgt 311  Q
    |||||||| |||||||||| |||||||||||||||||| |||||| |||||||||||| |||| ||||||| | |||||||    
T  12483533 gtctactcagtcatgctcatccgtgaccccacattgcctatccgattgttccacctcatatgtggtacctctccgggatgt 12483613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 20153206 - 20153297
Alignment:
Q  49 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||||||| ||| ||||||| || ||||| || |||||||||||  ||| |||||||||||||||||||||| |||||| ||||||    
T  20153206 cctcatgtatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaataaaacatt 20153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 36903022 - 36902924
Alignment:
Q  48 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 146  Q
    ||||||||||||| ||| | |||||||||| | ||| |||  |||||||||| || ||||||||||||| ||||||||| |||||||||||||| ||||    
T  36903022 tcctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacattgttctt 36902924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 12419596 - 12419493
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||| |  |||| ||||||| || ||| | || | || ||||| || || |||||||||||||||||||||| |||||||||||||| ||    
T  12419596 ggttcctcatgtattcaatagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacattgttc 12419497  T
Q  145 tttt 148  Q
    ||||    
T  12419496 tttt 12419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 21763672 - 21763586
Alignment:
Q  61 ggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    |||||| |||||||| | | ||| || ||||||||||||  || |||||||||||||||||||||| ||||||||||| || |||||    
T  21763672 ggtagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaacaatgttcttt 21763586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 18201138 - 18201234
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    |||||||||||| || ||||   |||||||||  | ||| |||| |||||||| |||| ||||||||||| ||||||||||| |||||||| |||||    
T  18201138 ggttcctcatgtgtaaggtaacgattttcacccttaggtgtaccacatatatatggcatcttgtatttatattttaaaaaatttaaatagatcattg 18201234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 9014863 - 9014782
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaata 133  Q
    |||| ||||||||||||||||| |||||||||| |||||       ||||||||| ||| |||||||||||||||| ||||| ||||||    
T  9014863 ggttactcatgtatacggtagtgattttcacctttgggt-------atatatacgacacattgtatttatcttttacaaaatttaaata 9014782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 38971255 - 38971333
Alignment:
Q  46 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaa 124  Q
    ||||||| ||| ||||||||| |||||||| | | ||| ||   |||||||||| ||||||||||||||||||||||||    
T  38971255 gttcctcgtgtttacggtagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatcttttaaaaa 38971333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 9014233 - 9014177
Alignment:
Q  91 atatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    ||||||||  ||| |||||||||||||||||||||| |||||| ||||||| |||||    
T  9014233 atatatacaacacattgtatttatcttttaaaaaatttaaataaaacattgttcttt 9014177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 40357453 - 40357413
Alignment:
Q  59 acggtagtcattttcacctctgggtataccgcatatatacg 99  Q
    |||||||||||||||| |||| ||| |||||||||||||||    
T  40357453 acggtagtcattttcatctcttggtgtaccgcatatatacg 40357413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 6e-77; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 36 - 217
Target Start/End: Complemental strand, 34756474 - 34756293
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34756474 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 34756375  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctca 217  Q
    |||||||||||||        |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  34756374 acattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctca 34756293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 36187987 - 36187795
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36187987 ttaggtggaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatataaataga 36187888  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||| ||||||||          | ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  36187887 acatcgctcttttaaaaaaaa-aacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 36187795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 27079003 - 27079197
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27079003 ttaggtgggggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 27079102  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||          || |||||||||||||||||| ||||||||||||   ||||||||||||||||||||||| |||||||||||    
T  27079103 acattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcagggacggccctg 27079197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 15480197 - 15480006
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15480197 ttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatataaataga 15480098  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||| | |||||          ||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  15480097 acatcggtcttt--aaaaaaaatatgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 15480006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 38869471 - 38869279
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  38869471 ttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 38869372  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         || ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||| | |||||||||||    
T  38869371 acattgctcttttaaaaaaaa-tacgttttgattttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccctg 38869279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 36 - 226
Target Start/End: Original strand, 30854321 - 30854511
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30854321 ttaggtgggggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 30854420  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |||||||||||||         || ||||| |||||||| ||||||| |||||||| | |||||||||||||| |||| ||| ||||||||    
T  30854421 acattgctcttttaaaaaaaaatacgttttaattttatcgctgaccttttttcattcccagagccgagcctccaaattatcagggacggcc 30854511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 16592182 - 16591990
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  16592182 ttaggtgggggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaaaatataaataga 16592083  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         |||||||||||||||||| || ||||||||||||   |||||||||||||| |||||||| |||||||||||    
T  16592082 acattgctcttttaaaaaaaa-tatgttttgattttatcattggcctcttttcattctcagagccgagcctccaaattctcaaggacggccctg 16591990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 36 - 225
Target Start/End: Original strand, 19523191 - 19523380
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19523191 ttaggtgggggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 19523290  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 225  Q
    |||  |||||||           | ||||||||||||||||||  ||||||||||| | ||||||||||||||||||||||| |||||||    
T  19523291 acaccgctctttaaaaaaaaaacacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattctcagggacggc 19523380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 224
Target Start/End: Original strand, 2274882 - 2275070
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  2274882 ttaggtgggggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaatataaataga 2274981  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacgg 224  Q
    |||| ||||||||         || |||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||| ||||||    
T  2274982 acatcgctcttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagaaccgagcctccgaattctcagggacgg 2275070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 16198902 - 16198709
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  16198902 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatataaataga 16198803  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||| |||          || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | ||| |||||||    
T  16198802 acattgctttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggaaggccctg 16198709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 49 - 229
Target Start/End: Complemental strand, 31194706 - 31194528
Alignment:
Q  49 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31194706 cctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 31194608  T
Q  149 nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
             || ||||||||||||||||||  ||||||||||| | ||||||||||||||||||| ||| |||||||||||    
T  31194607 aaaagaaa-tacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 31194528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 36 - 215
Target Start/End: Original strand, 9364283 - 9364462
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9364283 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 9364382  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
    |||||||| ||           || |||||||||||||||||| |||||||||||| | ||||| |||||||||||||||    
T  9364383 acattgcttttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagctgagcctccgaattct 9364462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 44 - 229
Target Start/End: Complemental strand, 22986658 - 22986473
Alignment:
Q  44 gggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 143  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||    
T  22986658 gggtttctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaatattaatagaacattgct 22986559  T
Q  144 cttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||        ||| |||||||||||||||||| ||||||||||||   ||||| ||||||||||||||||| |||||||||||    
T  22986558 cttttaaaaaaaattacgttttgattttatcactggcctcttttcattctcagagctgagcctccgaattctcacggacggccctg 22986473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 228
Target Start/End: Complemental strand, 28822450 - 28822253
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28822450 ttaggtgggggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 28822351  T
Q  136 acattgctctttt-----nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 228  Q
    |||||||||||||              || ||||||||||||||||| ||||||||||||| | | |||||| |||||||||||| | ||||||||||    
T  28822350 acattgctcttttaaaaaaaaaaaaaatacgttttgattttatcactaacctcttttcattcccaaagccgaacctccgaattcttagggacggccct 28822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 16799431 - 16799240
Alignment:
Q  40 gtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaaca- 138  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||     
T  16799431 gtgggggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatataaatagaacat 16799332  T
Q  139 ttgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    || |||||||          || |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| | |||||||||||    
T  16799331 ttactcttttaaaaaaaaaatacgttttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagggacggccctg 16799240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 36 - 215
Target Start/End: Original strand, 27924074 - 27924253
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||| ||| ||||||||||||||||||||||||||| |||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||||||     
T  27924074 ttaggcgggcgttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagg 27924173  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
     ||||||| ||||         || |||||||||||||||||| ||||||||||||   |||| |||||| |||||||||    
T  27924174 tcattgcttttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagtcgagcccccgaattct 27924253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 7670916 - 7671119
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaatataaatag 134  Q
    |||||||||| | ||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||| |||||||||||| |||||||||||||||    
T  7670916 ttaggtggggatacctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaatataaatag 7671015  T
Q  135 aacattgctctttt--------nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    ||||||||| ||||                 || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | ||||||||    
T  7671016 aacattgctttttttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaaggacggcc 7671115  T
Q  227 ctgt 230  Q
    ||||    
T  7671116 ctgt 7671119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 40389644 - 40389537
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||| | ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  40389644 ttaggtgggggttcctcataaatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 40389545  T
Q  136 acattgct 143  Q
    ||||||||    
T  40389544 acattgct 40389537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 23284164 - 23284058
Alignment:
Q  42 gggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||   |||||||||||||||||||||||||    
T  23284164 gggggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattg 23284065  T
Q  142 ctctttt 148  Q
    |||||||    
T  23284064 ctctttt 23284058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 229
Target Start/End: Complemental strand, 31881528 - 31881348
Alignment:
Q  49 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||||||||||||| ||||||| |||||| | | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31881528 cctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctctttt 31881430  T
Q  149 -nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
               | ||||||||||||| ||||||| ||||||||| | |||||||||||||  |||| ||| |||||||||||    
T  31881429 aaaaaaaaaaaacgttttgattttattactgaccacttttcattcccagagccgagcctctaaattttcagggacggccctg 31881348  T

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Target: chr5; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 215
Target Start/End: Original strand, 7338021 - 7338170
Alignment:
Q  66 tcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgtttt 165  Q
    |||||||||||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||           | |||||    
T  7338021 tcattttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttaaaaaaaaaaaacgtttt 7338120  T
Q  166 gattttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
    |||||||||  ||||||||||||||| | |||||||||||||| ||||||    
T  7338121 gattttatccttgacctcttttcattcctagagccgagcctccaaattct 7338170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 36868973 - 36868872
Alignment:
Q  47 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 146  Q
    |||||||||||||||||||| |||||||| | ||||| |||| |||||||||| |||||||||||||||||||||||||  |||||||||||||| ||||    
T  36868973 ttcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaacattgttctt 36868874  T
Q  147 tt 148  Q
    ||    
T  36868873 tt 36868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 14318484 - 14318382
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||||||||| |||||||  | ||| | || | |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  14318484 ggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 14318385  T
Q  145 ttt 147  Q
    |||    
T  14318384 ttt 14318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 2024738 - 2024638
Alignment:
Q  48 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    |||||||||||| |||||| ||||||| || ||||| || | |||||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||    
T  2024738 tcctcatgtatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacattgttcttt 2024639  T
Q  148 t 148  Q
    |    
T  2024638 t 2024638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 2530996 - 2530901
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||||||||| ||||| |||||||||| ||| | ||||| ||||||||| ||| |||||||||||||||||||||  |||||||||||||    
T  2530996 ggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaatagaacatt 2530901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 34425904 - 34426007
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||||||| | ||||| | || | ||| || | |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||    
T  34425904 ggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacattgttc 34426003  T
Q  145 tttt 148  Q
    ||||    
T  34426004 tttt 34426007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 26719045 - 26718953
Alignment:
Q  48 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    ||||||||||| ||||||| |||||||||| || || || |||||||||||| ||| |||||||||||||||||||| | |||||||||||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacatt 26718953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 26988789 - 26988697
Alignment:
Q  48 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    ||||||||||| ||||||| |||||||||| || || || |||||||||||| ||| |||||||||||||||||||| | |||||||||||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacatt 26988697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 1366625 - 1366522
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||| ||||||||||| |||||||| | | ||| || |||||||||||  || |||||||||||||| |||||||| |||||||||||||| ||    
T  1366625 ggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacattgttc 1366526  T
Q  145 tttt 148  Q
    ||||    
T  1366525 tttt 1366522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 33037781 - 33037884
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||||||| |  ||||||||| ||||| |||  ||||||||||  | ||||||||||||||||||||||| |||||| ||||||| ||    
T  33037781 ggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacattgttc 33037880  T
Q  145 tttt 148  Q
    ||||    
T  33037881 tttt 33037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 2412089 - 2412191
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||| ||||| |||||||| | ||| |  | |||||||||||| ||| |||||||||| ||||||||||| |||||||||||||| ||    
T  2412089 ggttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaatttaaatagaacattgttc 2412188  T
Q  145 ttt 147  Q
    |||    
T  2412189 ttt 2412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 24395741 - 24395835
Alignment:
Q  46 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    ||||||||| |||||||| || |||||||||| ||| | ||  | ||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  24395741 gttcctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 24395835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 10407464 - 10407565
Alignment:
Q  47 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 146  Q
    ||||||||| |||||||||| |||||||| | | | | |||  ||||| |||| |||||||| ||||||||||||||||| |||||||||||||| ||||    
T  10407464 ttcctcatgcatacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacattgttctt 10407563  T
Q  147 tt 148  Q
    ||    
T  10407564 tt 10407565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 10543682 - 10543769
Alignment:
Q  53 atgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||||||| |||||||||| ||| | || |||||||||||  |||||| ||||||||||||||||||| ||| | |||||||    
T  10543682 atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacatt 10543769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 11242417 - 11242314
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||||||||| |||| || || ||| | || | |||||||||  ||  |||||||||||||||||||||  |||||||||||||| ||    
T  11242417 ggttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacattgttc 11242318  T
Q  145 tttt 148  Q
    ||||    
T  11242317 tttt 11242314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 40794426 - 40794323
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||| ||||||||||||||||| |||||||||| | ||| || |  |||| |||||| | |||||||| ||||||||||||| |||||| ||||||| ||    
T  40794426 ggtttctcatgtatacggtagtgattttcaccttttggtgtatcatatatttacggctctttgtatttgtcttttaaaaaatttaaataaaacattgttc 40794327  T
Q  145 tttt 148  Q
    ||||    
T  40794326 tttt 40794323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 22648824 - 22648734
Alignment:
Q  56 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 146  Q
    ||||| ||||| ||| |||||| ||| | | || |||||||||| ||| |||||||||||||||||||||| |||||||||||||| ||||    
T  22648824 tatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatcttttaaaaaatttaaatagaacattgttctt 22648734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 41911716 - 41911614
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||| |||||| |||| ||||| || | ||||| |||||| |||||||| |||||||||||| ||||||||||||  ||| | |||||||| ||    
T  41911716 ggttcctcatatatacgatagtgatttttacttttgggtgtaccgcttatatacgacaccttgtatttctcttttaaaaaaattaagttgaacattgttc 41911617  T
Q  145 ttt 147  Q
    |||    
T  41911616 ttt 41911614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 606211 - 606258
Alignment:
Q  101 caccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  606211 caccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 606258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 40389518 - 40389467
Alignment:
Q  164 ttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
    ||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  40389518 ttgattttatcactgacatcttttcattcccagagccgagcctccgaattct 40389467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 15639644 - 15639724
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaa 125  Q
    ||||||| |||||||||  ||| ||||||| || ||| | || |||||||||||| |||||||||||||||||| ||||||    
T  15639644 ggttccttatgtatacgacagtgattttcatctttggatgtatcgcatatatacgtcaccttgtatttatctttaaaaaaa 15639724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 23284011 - 23283943
Alignment:
Q  161 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||||||| |||||||||||| | | | | ||||||| ||||||||| |||||||||||    
T  23284011 gttttgattttatcactggcctcttttcattcctaaaactgagcctctgaattctcagggacggccctg 23283943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 17344969 - 17345053
Alignment:
Q  57 atacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    |||||||||| ||||| | || ||||| ||||||||||| | | || |||||||||||  | |||||||| ||||||||||||||    
T  17344969 atacggtagtaatttttatctttgggtgtaccgcatatacatgacatcttgtatttattatataaaaaatttaaatagaacattg 17345053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 27530543 - 27530587
Alignment:
Q  104 cttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  27530543 cttgtattaatcttttaaaaaatttaaatagaacattgttctttt 27530587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 22875003 - 22875039
Alignment:
Q  105 ttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  22875003 ttgtatttatcttttaaaaaatttaaatagaatattg 22875039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 35080806 - 35080766
Alignment:
Q  108 tatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    ||||||||||||||||||| |||||| ||||||| ||||||    
T  35080806 tatttatcttttaaaaaatttaaataaaacattgttctttt 35080766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 6e-77; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 54619314 - 54619121
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54619314 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 54619215  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||        ||||||||||||||||||| || | |||||||||||| ||||||||||||||||||||||| |||||||||||    
T  54619214 acattgctcttttaaaaaaaattatgttttgattttatcattggcttcttttcatttccagagccgagcctccgaattctcagggacggccctg 54619121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 38681204 - 38681011
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38681204 ttaggtggggtttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatataaataga 38681105  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||        |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  38681104 acattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 38681011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 27078680 - 27078486
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27078680 ttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatataaataga 27078581  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||| ||||         ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  27078580 acattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccctg 27078486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 27084477 - 27084283
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27084477 ttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatataaataga 27084378  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||| ||||         ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||    
T  27084377 acattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccctg 27084283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 47467679 - 47467872
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47467679 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 47467778  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||| |||||||           | ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  47467779 acatcgctctttaaaaaaaaaacacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 47467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 36716136 - 36715941
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36716136 ttaggtgggggtccctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 36716037  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||||||||||||         ||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  36716036 acattgctcttttaaataaaaattatgtttttattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctgt 36715941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 43 - 234
Target Start/End: Complemental strand, 8073442 - 8073252
Alignment:
Q  43 ggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgc 142  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  8073442 ggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattac 8073343  T
Q  143 tcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgtgtct 234  Q
    ||||||         || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  8073342 tcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccctgagtct 8073252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 21582766 - 21582960
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21582766 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataaa 21582865  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||| ||||||          || |||||||||||||||||| |||||||||||| | | ||||||||||||||||||||| |||||||||||    
T  21582866 acattgttcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaagccgagcctccgaattctcagggacggccctg 21582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 34290747 - 34290553
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34290747 ttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 34290648  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||||| | ||||         || |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| | ||||||||||||    
T  34290647 acattgtttttttaaaaaaaaatacgttttgattttatcactgacttcttttcattcccagagccgagcctccgaattcttaaggacggccctgt 34290553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 43 - 229
Target Start/End: Original strand, 42098803 - 42098989
Alignment:
Q  43 ggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgc 142  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42098803 ggggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgc 42098902  T
Q  143 tcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||          |  ||||||||||||||||| ||||||||||||||  |||| |||||| |||||||||| |||||||||||    
T  42098903 tcttttaaaaaaaaagacattttgattttatcactggcctcttttcatttcccgagctgagccttcgaattctcagggacggccctg 42098989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 36 - 225
Target Start/End: Original strand, 37168362 - 37168551
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  37168362 ttaggtgggagttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaataga 37168461  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 225  Q
    |||||| | ||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | |||||||    
T  37168462 acattgtttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggc 37168551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 228
Target Start/End: Complemental strand, 3954007 - 3953816
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3954007 ttaggtgggggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 3953908  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccct 228  Q
    |||||| ||||||         ||  |||| |||||||||||| |||||||||||||| ||||| || |||||||||||||| ||||||||||    
T  3953907 acattgttcttttaaaaaaaa-tacattttaattttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacggccct 3953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 43207348 - 43207156
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43207348 ttaggtgggggttcctcatgtatacggtagtcattttcacctttga-tgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 43207250  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||||||||||||         || ||||| | |||||||||| |||||||||||| | |||||||||||||| |||||| | ||||||||||||    
T  43207249 acattgctcttttaaaaaaaa-tacgtttttaatttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccctgt 43207156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 225
Target Start/End: Original strand, 44708472 - 44708660
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  44708472 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatataaataga 44708571  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 225  Q
    ||||| || ||||         || |||||||||||||||||| |||||||||||| | ||||  ||||||||||||||| | |||||||    
T  44708572 acatttct-ttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagttgagcctccgaattcttagggacggc 44708660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 36605973 - 36606149
Alignment:
Q  49 cctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatc-ttttaaaaaatataaatagaacattgctcttt 147  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  36605973 cctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctat 36606071  T
Q  148 tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |         || ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  36606072 taaaaaaaa-tacgttttgattttatcactgacctcttttcatttccagagccgaacctccgaattttcagggacggcc 36606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 36 - 226
Target Start/End: Complemental strand, 53149425 - 53149235
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53149425 ttaggtgggggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 53149326  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |||| ||||||||          | ||||||||||||||||||  ||||||||||| |  || | |||||||||||||||||  |||||||    
T  53149325 acatcgctcttttaaaaaaaaaaacgttttgattttatcactggtctcttttcattccccgaactgagcctccgaattctcagagacggcc 53149235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 53506995 - 53506802
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  53506995 ttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 53506896  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||| | ||||          ||||||||||||||||||||| ||||| |||||| | |||||||||||| |||||||| | |||||||||||    
T  53506895 acattgtttttttaaaaaaaaaatatgttttgattttatcactggcctctcttcattcccagagccgagccttcgaattctta-ggacggccctg 53506802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 217
Target Start/End: Original strand, 18372474 - 18372658
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgc----atatatacggcaccttgtatttatcttttaaaaaatataaa 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| || ||||||    ||||||||| |||||||||||||||||||||||||||||||    
T  18372474 ttagatggggattcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatcttttaaaaaatataaa 18372573  T
Q  132 tagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctca 217  Q
    |||||||||||||||||         || ||||||||||||||||||||||||||||||| | || | ||||||||||||||||||    
T  18372574 tagaacattgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagtgtcgagcctccgaattctca 18372658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 50258731 - 50258542
Alignment:
Q  40 gtgggggttcctcatgtatacggtagtcattttcacc-tctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaaca 138  Q
    |||||||||||||||| ||||  |||||||||||||| || |||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  50258731 gtgggggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaaca 50258632  T
Q  139 ttgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    | ||||||||         |||||||||||||||||||||| |||||||| || | ||||||||||||||||||||||| | |||||||||    
T  50258631 tcgctctttttaaaaaaa-tatgttttgattttatcactgatctcttttcgttcccagagccgagcctccgaattctcaggaacggccctg 50258542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 50939344 - 50939152
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||| ||||  |||||||||||||||| ||||||||||||||||||||||||||||    
T  50939344 ttaggcgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatataaataga 50939245  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
     ||||||| ||||         || |||||||||||||||||| ||||||||||||   ||||||||||| ||||||||| | |||||||||||    
T  50939244 tcattgct-ttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcccccgaattcttagggacggccctg 50939152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 54407268 - 54407073
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54407268 ttaggtgggggttact-atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 54407170  T
Q  136 acattg---ctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||    | ||||          | |||||||||||||||| | |||||||||||| | ||||||||||||||||||||| | |||||||||||    
T  54407169 acattgttttttttttaaaaaaaaaaacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 54407073  T

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Target: chr3; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 9878798 - 9878644
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||| ||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  9878798 ttagatgggggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatataaataga 9878699  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatt 191  Q
    | |||||||||||         || |||| ||||||||||||||||||||||||||    
T  9878698 atattgctcttttaaaaaaaa-tacgtttagattttatcactgacctcttttcatt 9878644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 29620499 - 29620423
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtattt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29620499 ttaggtgggggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 54574929 - 54574826
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||||||||||| |||||| ||||| || | ||||| |||||||||||||||| ||||||||||||| |||| |||||| |||||||||||||| ||    
T  54574929 ggttcctcatgtatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacattgttc 54574830  T
Q  145 tttt 148  Q
    ||||    
T  54574829 tttt 54574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 28689458 - 28689368
Alignment:
Q  50 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    ||||||||||||| ||| |||||||||| ||| |||| ||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  28689458 ctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaaatagaacatt 28689368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 8420330 - 8420425
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||| | ||||||| ||| |||||||| | ||||| |||  ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8420330 ggttcctcgtatatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacatt 8420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 215
Target Start/End: Original strand, 48157138 - 48157302
Alignment:
Q  40 gtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 139  Q
    ||||||||||||||||||||| |||||||||||||||| ||||| ||||||          |||||| |||||||||||||||||||||||||||| |||    
T  48157138 gtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatataaatagatcat 48157227  T
Q  140 tgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
    |||  ||||         | ||||||||||||||||||| |||||||| ||| |  || |||||||||||||||||    
T  48157228 tgc-attttttttaaaaatgtgttttgattttatcactggcctctttttattcccggaaccgagcctccgaattct 48157302  T

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Target: chr3; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 32319257 - 32319162
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||| | |||| | |||| |||||||||| ||||| ||||||||||||||  ||| |||||||||||||||||||||| |||||||||||||    
T  32319257 ggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaacatt 32319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 29620426 - 29620364
Alignment:
Q  167 attttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  29620426 attttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 49393099 - 49393195
Alignment:
Q  50 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    ||||||||||||||||| ||||| |||| ||||| |||  |||||||||| | |||||||||||||||||||||||| |||| ||||||||| |||||    
T  49393099 ctcatgtatacggtagtaatttttacctttgggtgtaca-catatatacgacgccttgtatttatcttttaaaaaatttaaagagaacattgttcttt 49393195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 25855426 - 25855527
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||| || ||||||||||||| ||||||| || |||||  ||  |||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||    
T  25855426 ggttcttcgtgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaatttaaatagaacattgttc 25855524  T
Q  145 ttt 147  Q
    |||    
T  25855525 ttt 25855527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 26279563 - 26279649
Alignment:
Q  62 gtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    ||||| ||||||| || ||||| ||  ||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  26279563 gtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacattgttctttt 26279649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 48720497 - 48720428
Alignment:
Q  161 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||| |||||| | ||||||||||||    
T  48720497 gttttgattttatcacttacctcttttcattcccagagccgagcctcccaattcttagggacggccctgt 48720428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 23641380 - 23641329
Alignment:
Q  85 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 136  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  23641380 taccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaa 23641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 789940 - 790042
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||||||||||| ||| || ||||| |||| ||||| |||  |||||||| | ||||||||||||||  |||||||||| ||||||||| |||| ||    
T  789940 ggttcctcatgtatatggtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaagattgttc 790039  T
Q  145 ttt 147  Q
    |||    
T  790040 ttt 790042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 42453451 - 42453511
Alignment:
Q  88 cgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||||| | |||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  42453451 cgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacattgttctttt 42453511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 52374660 - 52374763
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||| |||||||||||||||| |||||| ||| | | | || ||||| |||||| ||| |||||||||| |   ||||||| |||||||||||||| ||    
T  52374660 ggttcttcatgtatacggtagtgattttctcctttagatgtatcgcatctatacgacacattgtatttatttaaaaaaaaatttaaatagaacattgttc 52374759  T
Q  145 tttt 148  Q
    ||||    
T  52374760 tttt 52374763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 2e-71; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 2952332 - 2952137
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2952332 ttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaataga 2952233  T
Q  136 acattgctctttt--nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||          |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  2952232 acattgctctttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 2952137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 36 - 226
Target Start/End: Original strand, 30883321 - 30883512
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30883321 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatataaataga 30883420  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |||||||||||||         |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  30883421 acattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctctgaattctcagggacggcc 30883512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 3048628 - 3048435
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3048628 ttaggtgagggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagt 3048529  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    | |||||||||||        |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  3048528 atattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagagacggccctg 3048435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 45475809 - 45476001
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45475809 ttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 45475908  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         || |||||||||||||||||| |||||||||||| |  |||||||||||||||||||||| ||| |||||||    
T  45475909 acattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattccccgagccgagcctccgaattctcagggatggccctg 45476001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 36 - 226
Target Start/End: Complemental strand, 13534797 - 13534609
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13534797 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatataaataga 13534699  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |||||||||||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||| ||| ||||||||    
T  13534698 acattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13534609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 36 - 226
Target Start/End: Complemental strand, 13624337 - 13624149
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13624337 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatataaataga 13624239  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |||||||||||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||| ||| ||||||||    
T  13624238 acattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13624149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 23606740 - 23606548
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23606740 ttaggtgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 23606641  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         || ||||||||||||||||||  ||||||||||| | ||||||||||||||||||||| | |||||||||||    
T  23606640 acattgctcttttaaaaaaaa-tacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagggacggccctg 23606548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 23798372 - 23798179
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23798372 ttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 23798273  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||||||||          || ||||||||||||||| |||||||||||| || | ||||||||||||||||||||| | |||||||||||    
T  23798272 acattgctctttaaaaaaaatatacgttttgattttatcattgacctcttttcgttcccagagccgagcctccgaattcttagggacggccctg 23798179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 42600774 - 42600967
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  42600774 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaataga 42600873  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
     ||||||| ||||          | ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | |||||||||||    
T  42600874 tcattgcttttttaaaaaaaaaaacgttttgattttatcactgacctcttttcattttcagagccgagcctccgaattcttagggacggccctg 42600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 36 - 217
Target Start/End: Complemental strand, 5860855 - 5860672
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||| |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5860855 ttaggttggggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 5860756  T
Q  136 acattgctcttt--tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctca 217  Q
    ||||||||||||           ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  5860755 acattgctctttaaaaataaatattatgttttgattttatcattgacctcttttcatttccagagccgagcctccaaattctca 5860672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 44 - 229
Target Start/End: Complemental strand, 37430261 - 37430076
Alignment:
Q  44 gggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 143  Q
    ||||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37430261 gggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgct 37430162  T
Q  144 cttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||          | |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  37430161 cttttaaaaaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 37430076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 41879173 - 41879364
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41879173 ttaggtgggggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaataga 41879272  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||| ||||||         || ||||| ||||||||||| ||||||||||||| | |||||||||||| |||||||||| |||||||||||    
T  41879273 acattgttcttttaaaaaaa--tacgttttaattttatcactaacctcttttcattcccagagccgagccttcgaattctcagggacggccctg 41879364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 10917383 - 10917576
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10917383 ttaggtgggggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 10917482  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
     ||||| | ||||         || |||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | |||| |||||||    
T  10917483 tcattg-ttttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttaaggacagccctgt 10917576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 7944624 - 7944521
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||||||||| |||||||||| ||||| |||  ||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||    
T  7944624 ggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacattgttc 7944525  T
Q  145 tttt 148  Q
    ||||    
T  7944524 tttt 7944521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 8102913 - 8103008
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||||||||||||| | |||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  8102913 ggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataacatt 8103008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 5973209 - 5973106
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||| ||||||||||| | ||||||| || ||||| |||  |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  5973209 ggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 5973110  T
Q  145 tttt 148  Q
    ||||    
T  5973109 tttt 5973106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 11290185 - 11290288
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||| ||||||||||||||||| |||||||||| || || |||  |||||||||| |||||||||||||||||||||||||| |||||| ||||||| ||    
T  11290185 ggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacattgttc 11290284  T
Q  145 tttt 148  Q
    ||||    
T  11290285 tttt 11290288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 39332507 - 39332405
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||||||||| |||||||||| ||| | |||||| |||||| | ||||||||||||||||||| |||||  |||||||||||||| ||    
T  39332507 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaacattgttc 39332408  T
Q  145 ttt 147  Q
    |||    
T  39332407 ttt 39332405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 5942697 - 5942777
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaa 125  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||||| || ||||||||||||||||||||||    
T  5942697 ggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 15167517 - 15167414
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||||||||||||| |||| |||||||| | ||||| || |||||||||||  ||| || ||||||||||||||||||| |||||||||||||| ||    
T  15167517 ggttcctcatgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacattgttc 15167418  T
Q  145 tttt 148  Q
    ||||    
T  15167417 tttt 15167414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 5721560 - 5721654
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 139  Q
    ||||||||| |||||||||||| |||||||| | ||||| |||||  |||||| |||||||||||||||||||||||||||  ||||||||||||    
T  5721560 ggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaattaaatagaacat 5721654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 41677276 - 41677172
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatagaacattgct 143  Q
    |||||||||||||||| ||||| |||||||||| | | | || |||||||||||| || |||||||||||||||||| ||||| |||||||||||||| |    
T  41677276 ggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacattgtt 41677177  T
Q  144 ctttt 148  Q
    |||||    
T  41677176 ctttt 41677172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 15078759 - 15078854
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    ||||||||||||||||| |||| |||||||| | ||||| ||  |||||||||| ||||||| ||||||||||||||||| | |||||||||||||    
T  15078759 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacatt 15078854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 25561595 - 25561502
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||||||||||| ||| |||||||| | ||||| || |||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  25561595 ggttcctcatgtatacggcagtgattttcacatttgggt-tatcgcatatatacggcaccttgtatttatc-tttaaaagatttaaatagaacatt 25561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 34789959 - 34789861
Alignment:
Q  50 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    ||||||||||||||||| |||||||||| ||||| |||  |||||||||| || |||||||||||||||||| | || |||||||||||| | ||||||    
T  34789959 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacatcgttctttt 34789861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 8646215 - 8646309
Alignment:
Q  53 atgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||||||||| |||||||| | || || ||  |||||||||||  ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  8646215 atgtatacggtagtgattttcacatttgcgtgtat-gcatatatacgataccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 8646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 20003796 - 20003728
Alignment:
Q  161 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||||||| |||||||||||| |  ||||||||||||| |||||||| |||||||||||    
T  20003796 gttttgattttatcactggcctcttttcattccccgagccgagcctccaaattctcagggacggccctg 20003728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 30674482 - 30674403
Alignment:
Q  68 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    |||||||||| || || || |||||||||||| |||||| |||||||||||||||| || |||||||||||||| |||||    
T  30674482 attttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacattgttcttt 30674403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 14510084 - 14509983
Alignment:
Q  45 ggttcctcatgtatacggtagtcatttt-cacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 143  Q
    |||| ||||||||||||||||| ||||| ||| | ||||| |||||  |||||||| |||||| ||||| ||||||||||||| ||||| |||||||| |    
T  14510084 ggttactcatgtatacggtagtgatttttcacatttgggtgtaccg--tatatacgacaccttatatttgtcttttaaaaaatttaaattgaacattgtt 14509987  T
Q  144 cttt 147  Q
    ||||    
T  14509986 cttt 14509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 9108551 - 9108596
Alignment:
Q  102 accttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||    
T  9108551 accttgtatttatcttttaaaaaatttaaatagaacattgttcttt 9108596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 23941170 - 23941097
Alignment:
Q  68 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    ||||||| || ||||| || ||| |||||| | |||||||||||||||||||||||||| |||||| |||||||    
T  23941170 attttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaatttaaataaaacattg 23941097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 140
Target Start/End: Complemental strand, 34868223 - 34868184
Alignment:
Q  101 caccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  34868223 caccttgtatttatcttttaaaaaatttaaatagaacatt 34868184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 34048806 - 34048705
Alignment:
Q  48 tcctcatgtatacggtagtcattttcacctctgggtatacc--gcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 145  Q
    ||||||||||||| ||||| ||||||| || ||||| || |    ||||||||| ||| |||||||||||||||||||  | |||||||||||||| |||    
T  34048806 tcctcatgtatacagtagtgattttcatctttgggtgtatcatatatatatacgacacattgtatttatcttttaaaatgtttaaatagaacattgttct 34048707  T
Q  146 tt 147  Q
    ||    
T  34048706 tt 34048705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 117
Target Start/End: Original strand, 5757123 - 5757153
Alignment:
Q  87 ccgcatatatacggcaccttgtatttatctt 117  Q
    |||||||||||||||||||||||||||||||    
T  5757123 ccgcatatatacggcaccttgtatttatctt 5757153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 33963300 - 33963268
Alignment:
Q  197 agccgagcctccgaattctcatggacggccctg 229  Q
    ||||||||||||||||||||||| |||||||||    
T  33963300 agccgagcctccgaattctcatgaacggccctg 33963268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 38009191 - 38009151
Alignment:
Q  108 tatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    ||||||||||||||||| | |||||||||||||| ||||||    
T  38009191 tatttatcttttaaaaattttaaatagaacattgttctttt 38009151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 2e-71; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 44655744 - 44655936
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44655744 ttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaataga 44655843  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||        ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  44655844 acattgctctttt-aaaaaaattatgttttgattttatcactggtctcttttcatttccagagccgagcctccgaattctcagggacggccctg 44655936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 14146303 - 14146495
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14146303 ttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 14146402  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||| ||||||||         || |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  14146403 acatcgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattccaagagccgagcctccgaattctcagggacggccctg 14146495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 5316683 - 5316876
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5316683 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 5316782  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||||||||||||         || ||||||||||||||||||||||||||||||| | |  | ||||||||| |||||||| ||||||||||||    
T  5316783 acattgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcctaaggtcgagcctccaaattctcagggacggccctgt 5316876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 23185430 - 23185622
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23185430 ttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 23185529  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         || |||||||||||||||||| |||||||||| | |  |||||||||||||||||||||| | |||||||||    
T  23185530 acattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcaatcctcgagccgagcctccgaattctcaggaacggccctg 23185622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 5027552 - 5027747
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5027552 ttaggtgggggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 5027651  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||||||||||||          || |||||||||||||||||| |||||||||||| |  ||| |||||||||||||||||| ||||||||||||    
T  5027652 acattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattccccgagtcgagcctccgaattctcagggacggccctgt 5027747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 17168959 - 17169151
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  17168959 ttaggtaggggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaatataaataga 17169058  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||| ||||         || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  17169059 acattgct-ttttttaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattcttagggacggccctg 17169151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 6771794 - 6771989
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6771794 ttaggtggaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 6771893  T
Q  136 acattgctcttt--tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||| |||||||             | |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  6771894 acatcgctctttaaaaaaaaaaaacacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 6771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 36 - 226
Target Start/End: Original strand, 50881433 - 50881621
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||| |||||||||||||||| |||||||||||||||||| | | ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50881433 ttaggtggaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaataga 50881532  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    |||||||||||||         ||  |||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  50881533 acattgctcttttaaaaaaa--tagattttaattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 50881621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 3406421 - 3406615
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3406421 ttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 3406520  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||| ||||||||          | ||||| ||||||||||||||||||||||||| |  |||| |||||||| |||||||| |||| |||||||    
T  3406521 acatcgctcttttaaaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccctgt 3406615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 3440399 - 3440205
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3440399 ttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 3440300  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||| ||||||||          | ||||| ||||||||||||||||||||||||| |  |||| |||||||| |||||||| |||| |||||||    
T  3440299 acatcgctcttttaaaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccctgt 3440205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 4971728 - 4971536
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4971728 ttaggtgggggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaataga 4971629  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||||| |||         |||||||||||||||||||||  ||||||||||| |  || ||||||||| ||||||||| |||| ||||||    
T  4971628 acattgctc-tttaaaaaaaaatatgttttgattttatcactggtctcttttcattccccgaaccgagcctcagaattctcagggacagccctg 4971536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 36 - 223
Target Start/End: Original strand, 16140058 - 16140244
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  16140058 ttaggtggggattcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaataga 16140157  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacg 223  Q
    ||||  |||||||         || |||||||||||||||| | |||||||||||| | ||||||||||||||||||||||| |||||    
T  16140158 acatcactcttttaaaaaaaa-tacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattctcagggacg 16140244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 27906827 - 27906646
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||| ||    
T  27906827 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgg------------cggcaccttgtatttatcttttaaaaaatataaatgga 27906740  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||        |||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  27906739 acattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccctg 27906646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 19955720 - 19955913
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  19955720 ttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 19955819  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
     ||||||| ||||         |  |||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | |||| |||||||    
T  19955820 tcattgct-ttttaaaaaaaaattcgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacagccctgt 19955913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 9173133 - 9172940
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9173133 ttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 9173034  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||| | |||          ||  |||| | |||||||| | |||||||||||| | ||||||||||||||||||||| | |||||||||||    
T  9173033 acattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 9172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 9181115 - 9180922
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9181115 ttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 9181016  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||| | |||          ||  |||| | |||||||| | |||||||||||| | ||||||||||||||||||||| | |||||||||||    
T  9181015 acattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 9180922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 40501900 - 40501707
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||| ||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  40501900 ttaggtggaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 40501801  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
     |||| || ||||         || |||||||||||||||||||||||||||||||   |||| |||||||||||||||| | |||||||||||    
T  40501800 tcattactttttttttaaaaaatacgttttgattttatcactgacctcttttcattctcagagtcgagcctccgaattcttagggacggccctg 40501707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 212
Target Start/End: Complemental strand, 41697247 - 41697072
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||  || |||||||||||||||||||||||||||||||    
T  41697247 ttaggtgggggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatataaataga 41697148  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaat 212  Q
    |||| ||||||||         || ||||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  41697147 acatcgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcttccgaat 41697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 54 - 230
Target Start/End: Complemental strand, 21741029 - 21740851
Alignment:
Q  54 tgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt--nnn 151  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||         
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctcttttaaaaa 21740930  T
Q  152 nnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
          ||  ||||||||||||||||| ||||||||||||   ||||||||||||||||||||||| ||||||||||||    
T  21740929 aaaaaatacattttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcaaggacggccctgt 21740851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 27559640 - 27559752
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  27559640 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 27559739  T
Q  136 acattgctctttt 148  Q
    |||||||| ||||    
T  27559740 acattgctttttt 27559752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 1366988 - 1366812
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1366988 ttaggtgggggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 1366889  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattc 214  Q
    |||||||||  ||         |||||||| | |||||||||| |||||||||||| | ||||| |||||||| |||||    
T  1366888 acattgctc--ttaaaaaaaaatatgttttcaatttatcactggcctcttttcattcccagagctgagcctccaaattc 1366812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 35 - 213
Target Start/End: Complemental strand, 51607551 - 51607374
Alignment:
Q  35 attaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacgg-caccttgtatttatcttttaaaaaatataaata 133  Q
    ||||| |||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  51607551 attagatgggagttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaatataaata 51607452  T
Q  134 gaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaatt 213  Q
     ||||||  | ||||         || ||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  51607451 aaacatt--ttttttttaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatt 51607374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 6889634 - 6889805
Alignment:
Q  56 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnn 155  Q
    ||||||| | |||||||||||||||| | |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||           
T  6889634 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa 6889733  T
Q  156 nttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
      || |||||||||||||||||||||||||||||||   ||| ||||||||||||||| ||| |||||||||||    
T  6889734 --tacgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 6891480 - 6891651
Alignment:
Q  56 tatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnn 155  Q
    ||||||| | |||||||||||||||| | |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||           
T  6891480 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa 6891579  T
Q  156 nttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
      || |||||||||||||||||||||||||||||||   ||| ||||||||||||||| ||| |||||||||||    
T  6891580 --tacgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6891651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 229
Target Start/End: Complemental strand, 22865538 - 22865378
Alignment:
Q  68 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttga 167  Q
    |||||||||| ||||| ||||| |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||         || |||||||    
T  22865538 attttcacctttgggtgtaccg-atatatagagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttgaaaaaaaatacgttttga 22865440  T
Q  168 ttttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||| ||||||||||||||| | ||||||| ||||||||||||||| |||||||||||    
T  22865439 ttttatcattgacctcttttcattcccagagccgtgcctccgaattctcagggacggccctg 22865378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 36 - 226
Target Start/End: Complemental strand, 13913592 - 13913401
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatata--cggcaccttgtatttatcttttaaaaaatataaata 133  Q
    ||||||||||||| |||||||||||||||||||||||||| | | ||| |||||||||||||  ||||| ||| ||||||||||||||||||||||||||    
T  13913592 ttaggtgggggtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaatataaata 13913493  T
Q  134 gaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    || ||||||| ||||         ||  ||||||||||||||||| | ||||||||||   |||||| |||||||||||||| | ||||||||    
T  13913492 gatcattgct-tttttaaaaaaaatacattttgattttatcactggcatcttttcattctcagagccaagcctccgaattcttagggacggcc 13913401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 38547137 - 38547035
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||||||||||| | |||| |||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  38547137 ggttcctcatgtatatgatagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgatc 38547038  T
Q  145 ttt 147  Q
    |||    
T  38547037 ttt 38547035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 38853539 - 38853637
Alignment:
Q  50 ctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    ||||||||||||||||| |||||||||| ||| |||||  |||||||||| ||||||||||||||| |||||||||| ||||||||||| || ||||||    
T  38853539 ctcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaacactgttctttt 38853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 39134824 - 39134720
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatc-ttttaaaaaatataaatagaacattgct 143  Q
    |||||||||||||||| ||||| ||| |||||| ||||| ||  |||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |    
T  39134824 ggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacattgtt 39134725  T
Q  144 ctttt 148  Q
    |||||    
T  39134724 ctttt 39134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 44895655 - 44895827
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| ||||      |  || |||||| ||||||||||||||||||||||||||||    
T  44895655 ttaggtgggggttcctcatgtatacggtaatcattttcacctttgggtgtacc------acccgccaccttatatttatcttttaaaaaatataaataga 44895748  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaatt 213  Q
     ||||| | ||||          |||||||||||||| |||| |||||||||||||| | ||| |||| ||||||||||    
T  44895749 tcattgtttttttaaaaaaaaaatatgttttgattttttcaccgacctcttttcattcccagaaccgaacctccgaatt 44895827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 45758506 - 45758609
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||||||||||||||| |||||||||| ||| | ||   |||||||||  ||||||| |||||||||||||||||| |||||||||||||| ||    
T  45758506 ggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaatttaaatagaacattgttc 45758605  T
Q  145 tttt 148  Q
    ||||    
T  45758606 tttt 45758609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 5533326 - 5533428
Alignment:
Q  47 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaatataaatagaacattgctct 145  Q
    |||||||||||||||||||| |||||||||| ||  | |||  ||||||||||||||||||| |||||||||| ||||||| ||||||||| |||| |||    
T  5533326 ttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaatattgttct 5533425  T
Q  146 ttt 148  Q
    |||    
T  5533426 ttt 5533428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 34247154 - 34247216
Alignment:
Q  161 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacg 223  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  34247154 gttttgattttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacg 34247216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 35392295 - 35392376
Alignment:
Q  58 tacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||    
T  35392295 tacggtagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc-cttaaaaaatttaaataaaacatt 35392376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 26803960 - 26804059
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||| ||||||||||||||||| |||||||||| || ||||  |||||||||||| || ||||||||||||||||||||||| |||||| | ||||| ||    
T  26803960 ggtttctcatgtatacggtagtgattttcacct-tgtgtat--cgcatatatacgacatcttgtatttatcttttaaaaaatttaaatatagcattgttc 26804056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 50146308 - 50146411
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||||||||||| |||| | ||||| |||| ||||| || | |||||| ||||||||||| |||||||||| ||||| | |||||||||||||| ||    
T  50146308 ggttcctcatgtatagggtaatgatttttacctttgggtctatcacatatacacggcaccttgcatttatctttcaaaaagtttaaatagaacattgttc 50146407  T
Q  145 tttt 148  Q
    ||||    
T  50146408 tttt 50146411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 43235871 - 43235774
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttt--taaaaaatataaatagaacatt 140  Q
    ||||||||||||||||| |||| |||||||||| ||||| |||  |||||||||| || |||||||||||||||   ||||||| |||||||||||||    
T  43235871 ggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacatt 43235774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 33170771 - 33170867
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    |||| ||||||||||||||||| |||||||||  | ||| ||||||||||||||  ||| |||||||||  ||||||||||| |||||| |||||||    
T  33170771 ggtttctcatgtatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtatttacgttttaaaaaatttaaatataacattg 33170867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 17322684 - 17322621
Alignment:
Q  85 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||||||||||  || |||||||||||||| |||||||||||||||||||||| ||||||    
T  17322684 taccgcatatatacgctacattgtatttatctttaaaaaaatataaatagaacattgttctttt 17322621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 6221690 - 6221791
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||||| |||||| || | |||||||| | | | | |||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||| ||    
T  6221690 ggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatctttt-aaaaatttaaatagaacattgttc 6221788  T
Q  145 ttt 147  Q
    |||    
T  6221789 ttt 6221791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 10926052 - 10925951
Alignment:
Q  48 tcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaa-atataaatagaacattgctctt 146  Q
    ||||||||||||||||||| ||||||| || ||| |  | | |||||||||||||| |||||||||| ||||||||| |  ||||||||| |||| ||||    
T  10926052 tcctcatgtatacggtagtgattttcatctttggatgcatctcatatatacggcacattgtatttattttttaaaaatacttaaatagaatattgttctt 10925953  T
Q  147 tt 148  Q
    ||    
T  10925952 tt 10925951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 52127494 - 52127457
Alignment:
Q  195 agagccgagcctccgaattctcatggacggccctgtgt 232  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  52127494 agagccgagcctccgaattctcagggacggtcctgtgt 52127457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 34247066 - 34247106
Alignment:
Q  59 acggtagtcattttcacctctgggtataccgcatatatacg 99  Q
    |||||||||||||||| |||| ||| |||||||||||||||    
T  34247066 acggtagtcattttcatctcttggtgtaccgcatatatacg 34247106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 9e-70; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 36 - 217
Target Start/End: Complemental strand, 38209701 - 38209520
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38209701 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 38209602  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctca 217  Q
    ||||||||||||         |||| ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  38209601 acattgctctttaaaaaaaaattatattttgattttatcactggcctcttttcatttccagagccgagcctccaaattctca 38209520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 36 - 232
Target Start/End: Original strand, 54780774 - 54780971
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54780774 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 54780873  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgtgt 232  Q
    |||||||||||||          || |||||||||||||||||| |||||||||||| | |||||| |||||||||||||||| ||||||||||||||    
T  54780874 acattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccaagcctccgaattctcagggacggccctgtgt 54780971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 36 - 225
Target Start/End: Original strand, 47128984 - 47129172
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47128984 ttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 47129083  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 225  Q
    |||||| ||||||         ||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  47129084 acattgttcttttaaaaaaaa-tacattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggc 47129172  T

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Target: chr4; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 34768684 - 34768492
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34768684 ttaggtgggggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 34768585  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         ||||||||||||||||||||  |||||||||||| | | ||||||||||||||||||||| ||||| |||||    
T  34768584 acattgctcttttaaaaaaaa-tatgttttgattttatcactagcctcttttcattcccaaagccgagcctccgaattctcagggacgaccctg 34768492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 36 - 215
Target Start/End: Complemental strand, 43455641 - 43455463
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43455641 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 43455542  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
    |||||||||||||         || ||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  43455541 acattgctcttttaaaaataa-tacgttttgattttatcactgacctcttttcattcccagagtcgagcctccgaattct 43455463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 32915382 - 32915576
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32915382 ttaggtgggggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaataga 32915481  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||| ||||||||            |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  32915482 acatcgctcttttaaaaaaaaaaccgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctgt 32915576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 32128581 - 32128774
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  32128581 ttaggtgggggtttcttatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 32128680  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         || |||||||||||||||||||||| |||||||| | |||||||||||||| |||||| | |||||||||||    
T  32128681 acattgctcttttaaaaaaaaatacgttttgattttatcactgaccttttttcattcccagagccgagcctccaaattcttagggacggccctg 32128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 34027576 - 34027768
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  34027576 ttaggtgggggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 34027675  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||| ||||         || |||||||||||||||||| |||||||||||| | ||||||||||||||||||||| | |||||||||||    
T  34027676 acattgct-ttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 34027768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 35 - 229
Target Start/End: Complemental strand, 2790852 - 2790659
Alignment:
Q  35 attaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatag 134  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  2790852 attaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatag 2790753  T
Q  135 aacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||| ||||||          ||||||||||||||||||||  ||||||||||| | ||||||||||||||||||||| |  ||||||||||    
T  2790752 aacattgttcttttaaaaaaaa-aatgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagagacggccctg 2790659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 44 - 213
Target Start/End: Complemental strand, 37777325 - 37777156
Alignment:
Q  44 gggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgct 143  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  37777325 gggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattact 37777226  T
Q  144 cttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaatt 213  Q
     ||||         || ||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  37777225 ttttttttaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatt 37777156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 10978897 - 10979092
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10978897 ttaggtgggggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaataga 10978996  T
Q  136 acattgctctttt--nnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||           || ||||||||||||||||| ||||||||||||| | |||||  | ||||||||||||||  ||||||||||    
T  10978997 acattgctcttttaaaaaaaaaaatacgttttgattttatcactaacctcttttcattcccagagctaaacctccgaattctcagagacggccctg 10979092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 36 - 225
Target Start/End: Original strand, 1105529 - 1105717
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  1105529 ttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaatataaataga 1105628  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggc 225  Q
    ||||  |||||||         || ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||| |||||||    
T  1105629 acatcactcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 1105717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 36 - 232
Target Start/End: Complemental strand, 10428315 - 10428113
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcac--------ctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata 127  Q
    |||||||| |||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10428315 ttaggtggaggttcctcatgtatacggtagtcattttcacaatttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaata 10428216  T
Q  128 taaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccc 227  Q
    ||||||||||||||  |||||         ||  ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||  |||||||||    
T  10428215 taaatagaacattg--ctttttaaaaaaaataaattttgattttagcactgacctcttttcattcccagagccgagcctccgaattctcgaggacggccc 10428118  T
Q  228 tgtgt 232  Q
    |||||    
T  10428117 tgtgt 10428113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 55255266 - 55255447
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||| ||    
T  55255266 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgg------------cggcaccttgtatttatcttttaaaaaatataaatgga 55255353  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||        |||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  55255354 acattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccctg 55255447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 48209237 - 48209436
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48209237 ttaggtgggggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 48209336  T
Q  136 acattgctctttt-nnnnnnnnttatgttttgat-----tttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||          || ||||||||     ||||||||||  ||||||||| | | ||||||||||||||||||||||| |||||||||||    
T  48209337 acattgctcttttaaaaaaaaaatacgttttgattttaatttatcactggtctcttttcactcccagagccgagcctccgaattctcagggacggccctg 48209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 5128952 - 5128758
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  5128952 ttaggtggaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 5128853  T
Q  136 acattgctcttttnnnnnnnnttatgtttt-gattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    | || |||||| |          | ||||| ||||||||||||| |||||||||||| | |||||||||||||  |||||||| |||||||||||    
T  5128852 atatcgctcttctaaaaaaaaaaacgttttagattttatcactggcctcttttcattcccagagccgagcctctaaattctcagggacggccctg 5128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 54083352 - 54083160
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||| |||||||||||||||||||||||||||||| | || ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54083352 ttaggtaggggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 54083253  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
     ||||| | ||||         || |||||||||||||||||||||||||||||||   ||||||||||||||||||| | | |||||||||||    
T  54083252 tcattg-ttttttttaaaaaaatacgttttgattttatcactgacctcttttcattctcagagccgagcctccgaatttttagggacggccctg 54083160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 16845018 - 16845211
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt-aaaaaatataaatag 134  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| |||  |||||||||| |||||| |||||||||||| |||||||||||||||    
T  16845018 ttaggtgggggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaatataaatag 16845117  T
Q  135 aacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    ||||||||||||||         || ||||||||||||||||||  || |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  16845118 aacattgctcttttaaaaaaaa-tacgttttgattttatcactg-gcttttttcatttccagagccgagcctccgaattcttagggacggccctgt 16845211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 19498501 - 19498691
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||||  |||||||||| ||||||||||||||||||||||||||||    
T  19498501 ttaggtgggggttcctcatgtatacagtagtcattttcacctttggctgtaccgcatat--acggcaccttatatttatcttttaaaaaatataaataga 19498598  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||         || ||||||||||||||| || ||| |||||||| | ||||||||||||||||||||| |  ||||||||||    
T  19498599 acattgctcttttaaacaaaa-tacgttttgattttatcattggcctgttttcattcctagagccgagcctccgaattcttagtgacggccctg 19498691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 36 - 232
Target Start/End: Original strand, 40089513 - 40089717
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaa---------aaat 126  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||         ||||    
T  40089513 ttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaatataaataaat 40089612  T
Q  127 ataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    ||||||| ||||||||| ||||         || |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| | ||||| ||    
T  40089613 ataaataaaacattgct-tttttaaaaaaaatacgttttgattttatcactgacttcttttcattccaagagccgagcctccgaattcttagggacgacc 40089711  T
Q  227 ctgtgt 232  Q
    ||||||    
T  40089712 ctgtgt 40089717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 37514656 - 37514849
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37514656 ttaggtggggattcttcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 37514755  T
Q  136 acattgctcttt-tnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||| |||||||           || |||||||||||||||||| |||||||||||| |    || |||||||| |||||||| ||||||||||||    
T  37514756 acatcgctctttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcc--ccgctgagcctccaaattctcagggacggccctgt 37514849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 13460204 - 13460306
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13460204 ttaggtgggggttccttatgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttttaaaaaatataaataga 13460303  T
Q  136 aca 138  Q
    |||    
T  13460304 aca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 17679432 - 17679589
Alignment:
Q  71 ttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattt 170  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||         || ||||||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgctcttttaaaaaaaa-tacgttttgattt 17679530  T
Q  171 tatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||||  ||||||||||| | ||| |||||||||||||||||||  ||||||||||    
T  17679531 tatcactggtctcttttcattcccagaaccgagcctccgaattctcagagacggccctg 17679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 226
Target Start/End: Complemental strand, 35779435 - 35779248
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||  |||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  35779435 ttaggtgaaggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat-aataga 35779337  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    ||||||||||||          || |||||||||||||||||  |||||||||||| |  ||| ||| |||||||||||||| ||||||||    
T  35779336 acattgctcttt--aaaaaaaatacgttttgattttatcactagcctcttttcattcctcgagtcgaacctccgaattctcaaggacggcc 35779248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 16882505 - 16882313
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||| ||||||| |||  ||||||||||||||||||||| | ||| ||||| ||||| |||||||||| ||||||||||||||||| ||||||||||    
T  16882505 ttaggtgagggttccccatacatacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaagtataaataga 16882406  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||| | ||||         || |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| | |||||||||||    
T  16882405 acattg-ttttttttaaaaaaatacgttttgattttatcactgacttcttttcattcctagagccgagcctccgaattcttagggacggccctg 16882313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 217
Target Start/End: Original strand, 35465104 - 35465283
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||| |||||||||||||||||||| |||||||| | | ||| |||||||||||||| ||||||| |||||||||| ||||||||||||||| |    
T  35465104 ttaggtggggattcctcatgtatacggtagttattttcacttttaggtgtaccgcatatatac-gcaccttttatttatcttgtaaaaaatataaatata 35465202  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctca 217  Q
    |||||| ||||||         |||||||||||||||||||||||||||||||||| | |||  ||||||||||||||||||    
T  35465203 acattgttcttttaaaaaaaa-tatgttttgattttatcactgacctcttttcattcccagaatcgagcctccgaattctca 35465283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 36 - 215
Target Start/End: Complemental strand, 38352365 - 38352197
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||          |||||| ||||||||||||||||||||||||||||    
T  38352365 ttaggtgggggttcctcatgtacacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatataaataga 38352276  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattct 215  Q
     |||| || ||||         || ||||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  38352275 tcattact-ttttaaaaaaaaatacgttttgattttatcactgatctcttttcattcccagagccgagcctccgaattct 38352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 51964736 - 51964897
Alignment:
Q  67 cattttcacctctgggtataccgcatatatacggcaccttgtatttatctttt---aaaaaatataaatagaacattgctcttttnnnnnnnnttatgtt 163  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||         || |||    
T  51964736 cattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctcttttaaaaaaaa-tacgtt 51964834  T
Q  164 ttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggcc 226  Q
    ||||||||||||  | |||||||||||| | ||||||||| ||||||||| ||| ||| ||||    
T  51964835 ttgattttatcatcggcctcttttcattcccagagccgagtctccgaattttcaaggatggcc 51964897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 52468292 - 52468459
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||||||| |||||||||| |||||||||| ||| | ||   ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  52468292 ggttcctcatgcatacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttc 52468391  T
Q  145 ttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattc 214  Q
    ||||         || ||||| ||||||| || ||||||||||||  |  ||||||||||||||||||||    
T  52468392 ttttaaaaaaa--tacgtttttattttattacagacctcttttcacctacagagccgagcctccgaattc 52468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 16922409 - 16922245
Alignment:
Q  66 tcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-nnnnnnnnttatgttt 164  Q
    |||||||||||| |||| |||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||           | ||||    
T  16922409 tcattttcacctttggggatactgcatatatacgacactttatatttatcttttaaaaaatataaatagaacattgctcttttaaaaataaaaaacgttt 16922310  T
Q  165 tgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||||||||||||||  ||||||||||| | | || ||||||||| |||||||| |||||||||||    
T  16922309 tgattttatcactggtctcttttcattcccaaagtcgagcctccaaattctcagggacggccctg 16922245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 4167992 - 4167910
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata 127  Q
    ||||||||||||||| |||||| |||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  4167992 ggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaata 4167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 51691976 - 51691913
Alignment:
Q  85 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51691976 taccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctctttt 51691913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 229
Target Start/End: Complemental strand, 23508564 - 23508427
Alignment:
Q  93 atatacggcaccttgtatttatcttttaaaaaat-ataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatt 191  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||          ||  ||||||||||||||||| ||||||||||||    
T  23508564 atatacgacaccttgtatttatcttttaaaaaattataaatagaacattgctcattaaaaaaaaaatacattttgattttatcactggcctcttttcatt 23508465  T
Q  192 tcaagagccgagcctccgaattctcatggacggccctg 229  Q
     | | ||||||||||||||||| |||||||||| ||||    
T  23508464 cccaaagccgagcctccgaattttcatggacggtcctg 23508427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 24969434 - 24969536
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||          |||||| ||||||||||||||||||||||||||||    
T  24969434 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatataaataga 24969523  T
Q  136 acattgctctttt 148  Q
     ||||||| ||||    
T  24969524 tcattgctttttt 24969536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 27112036 - 27112132
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    |||||||||||||||||||||| |||||||| | | ||| || |||||||||| | |||||||||||||||||||||||||| ||||| ||||||||    
T  27112036 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 27112132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 36118559 - 36118463
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    |||| ||||||||||||||||| |||||||  | ||||| || | |||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  36118559 ggttactcatgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 36118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 9578736 - 9578662
Alignment:
Q  75 cctctgggtataccgcatatatacggc-accttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    ||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9578736 cctctggatgtaccgcatatatatggctaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 9578662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 36178684 - 36178774
Alignment:
Q  51 tcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    ||||||||| |||||| |||||||| | ||||| || |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  36178684 tcatgtataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacattg 36178774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 39655332 - 39655252
Alignment:
Q  68 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    |||||||||| ||||| |||||||||||| ||| || |||||||||||||||||||||| |||||||||||||| ||||||    
T  39655332 attttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattgttctttt 39655252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 10042101 - 10041998
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    |||||||| ||||||||||||| |||||||| | | ||| || | |||| |||||||||||||||||||| |||| |||||| |||||||||||||| ||    
T  10042101 ggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacattgttc 10042002  T
Q  145 tttt 148  Q
    ||||    
T  10042001 tttt 10041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 24396940 - 24397043
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||||||||||||||| |||| |||||||||| || || || | ||||||||| ||||||| ||||||||||||||||||| |||||| || |||| ||    
T  24396940 ggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaataaaatattgttc 24397039  T
Q  145 tttt 148  Q
    ||||    
T  24397040 tttt 24397043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 23509908 - 23509846
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatac 98  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  23509908 ttaggtgggggttcctcatgtctacggtagtcattttcacctctaggtgtaccgcatatatac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 2135422 - 2135326
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    |||||||||| |||||| |||| || || |||| ||| | || |||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  2135422 ggttcctcatatatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattg 2135326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 214
Target Start/End: Complemental strand, 39329492 - 39329325
Alignment:
Q  46 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 145  Q
    ||||||| |||||||||||   ||||||| || ||||| || | |||||||||  |||||||||||||||||||||||||| |||| ||||||||| |||    
T  39329492 gttcctcctgtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacattgttct 39329393  T
Q  146 tttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattc 214  Q
    |||         |||||||| ||||||| || |||||||||||| ||  ||| |||||||||| |||||    
T  39329392 tttaaaaaaaa-tatgtttttattttattacggacctcttttcacttacagaaccgagcctccaaattc 39329325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 139
Target Start/End: Complemental strand, 37745011 - 37744916
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa-aaaatataaatagaacat 139  Q
    ||||||||| |||||||||||| |||||||||| ||| | || ||||||||| || |||||| |||||||||||||| ||||| ||||||||||||    
T  37745011 ggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaacat 37744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 36362964 - 36362869
Alignment:
Q  53 atgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    ||||||| |||||| |||| ||| | ||||| ||  ||||||||||||||| |||||||||||||||||||||| |||| ||| ||||| ||||||    
T  36362964 atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaatttaaacagagcattgttctttt 36362869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 45656181 - 45656277
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    ||||| ||||||||||| | || |||||||| | ||| | || |||||||||| | ||||||| |||||||||||||||||| |||||| |||||||    
T  45656181 ggttcgtcatgtatacgttcgtgattttcacatttggatttatcgcatatatatgacaccttgcatttatcttttaaaaaatttaaataaaacattg 45656277  T

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Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 40217238 - 40217327
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatag 134  Q
    |||| |||||||||| | || | ||||||| || ||| | || |||||||||||| |||||| ||||||||||||||||||| |||||||    
T  40217238 ggttactcatgtatatgctaatgattttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaaatttaaatag 40217327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 24969718 - 24969786
Alignment:
Q  161 gttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||| ||||||||||  |||||||||||| | |||| |||||||||||||||| | |||||||||||    
T  24969718 gttttgtttttatcactagcctcttttcattcccagagtcgagcctccgaattcttagggacggccctg 24969786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 2975413 - 2975358
Alignment:
Q  158 tatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaatt 213  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||| | ||||||    
T  2975413 tatgttttgattttatcattgacctcttttcattttcagagccgagcattcgaatt 2975358  T

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Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 13460305 - 13460360
Alignment:
Q  174 cactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||||||| ||| | |||| |||||||||||||||||| |||||||||||    
T  13460305 cactgacctctttttattcccagagtcgagcctccgaattctcaaggacggccctg 13460360  T

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Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 24614018 - 24614061
Alignment:
Q  104 cttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  24614018 cttgtatttatcttttaaaaaatttaaatagaacattgttcttt 24614061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 30507162 - 30507120
Alignment:
Q  106 tgtatttatcttttaaaaaatataaatagaacattgctctttt 148  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaacattgttctttt 30507120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 29425231 - 29425187
Alignment:
Q  89 gcatatatacggcaccttgtatttatcttttaaaaaatataaata 133  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||    
T  29425231 gcatatatacggcaccttatatttattttttaaaaaatttaaata 29425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 15735142 - 15735189
Alignment:
Q  91 atatatacggcaccttgtatttatcttttaaaaaatataaatagaaca 138  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||    
T  15735142 atatatacgacgtcttgtatttatcttttaaaaaatttaaatagaaca 15735189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 9578624 - 9578575
Alignment:
Q  180 cctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    |||||||||| | | |||| |||||||||||||||||| |||||||||||    
T  9578624 cctcttttcactcccagagtcgagcctccgaattctcaaggacggccctg 9578575  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 11906952 - 11906904
Alignment:
Q  85 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaata 133  Q
    |||| ||||||||||| |||||||||||||||||  |||||| ||||||    
T  11906952 taccacatatatacggtaccttgtatttatctttataaaaatttaaata 11906904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 1335 - 1527
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1335 ttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatataaataga 1434  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    ||| |||||||||         || ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  1435 acagtgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 1527  T

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Target: scaffold0039 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 36 - 230
Target Start/End: Original strand, 106530 - 106724
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  106530 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 106629  T
Q  136 acattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttcatttcaagagccgagcctccgaattctcatggacggccctgt 230  Q
    |||||| ||||||         || |||||||||||||||||| |||||||||||| | |||||||||||||| |||||| | ||||||||||||    
T  106630 acattgttcttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccctgt 106724  T

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Target: scaffold1590 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 360 - 257
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctc 144  Q
    ||||| |||||||||||||||| |||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  360 ggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 261  T
Q  145 tttt 148  Q
    ||||    
T  260 tttt 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 206591 - 206496
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    |||||||||||||||||||||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  206591 ggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaacatt 206496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 173612 - 173516
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    ||||||||| |||||||||||| ||||| |||| ||||| || ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  173612 ggttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacattg 173516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 38926 - 39022
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg 141  Q
    |||||||||| ||||||||||| |||||||| | || || || |||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  38926 ggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 39022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 230960 - 230858
Alignment:
Q  46 gttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctct 145  Q
    |||||||||||||| |||||| |||||||||| |||||||| |||||||||||  ||||||  ||||||||||||| |||| |||||||||||||| |||    
T  230960 gttcctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaacattgttct 230861  T
Q  146 ttt 148  Q
    |||    
T  230860 ttt 230858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 24093 - 23993
Alignment:
Q  47 ttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctt 146  Q
    ||||| ||| |||||||| | |||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||    
T  24093 ttccttatgcatacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattgttctt 23994  T
Q  147 t 147  Q
    |    
T  23993 t 23993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 229
Target Start/End: Original strand, 183106 - 183244
Alignment:
Q  90 catatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcactgacctcttttca 189  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||  |||||||        | | ||||| |||||||||||| ||||||||||    
T  183106 catatatacgatactttgtatttatcttttaaaaaatataaatagaacatctctcttttaaaaaaaat-acgttttaattttatcactggcctcttttca 183204  T
Q  190 tttcaagagccgagcctccgaattctcatggacggccctg 229  Q
    || | ||||||||||||| ||||| ||| |||||||||||    
T  183205 ttcccagagccgagcctctgaattttcagggacggccctg 183244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 181911 - 181969
Alignment:
Q  36 ttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtataccgcatat 94  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  181911 ttagatgggggttcctcatgtatacggtagtcattttcacctctggatgtaccgcatat 181969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 1355 - 1450
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatt 140  Q
    ||||||||||||||||| |||| |||||||| | ||||| ||  |||||||||| ||||||| ||||||||||||||||| | |||||||||||||    
T  1355 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacatt 1450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 40086 - 40191
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata--taaatagaacattgc 142  Q
    |||| |||||||||||| | || ||||||||||  |||| |||  |||| ||||||||||||||||||||||||||||||| |  ||||||||||||||     
T  40086 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgt 40185  T
Q  143 tctttt 148  Q
    ||||||    
T  40186 tctttt 40191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 138146 - 138251
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaaaaaata--taaatagaacattgc 142  Q
    |||| |||||||||||| | || ||||||||||  |||| |||  |||| ||||||||||||||||||||||||||||||| |  ||||||||||||||     
T  138146 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgt 138245  T
Q  143 tctttt 148  Q
    ||||||    
T  138246 tctttt 138251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 16123 - 16168
Alignment:
Q  102 accttgtatttatcttttaaaaaatataaatagaacattgctcttt 147  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  16123 accttgtatttatcttttaaaaaatttaaatagaacatttctcttt 16168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 16028 - 16095
Alignment:
Q  45 ggttcctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcaccttgtattt 112  Q
    |||| ||||||||||||||||| ||||||| || ||| | ||||||||| ||||| || |||||||||    
T  16028 ggtttctcatgtatacggtagtgattttcatctttggatgtaccgcatacatacgacatcttgtattt 16095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 351413 - 351360
Alignment:
Q  68 attttcacctctgggtataccgcatatatacggcaccttgtatttatcttttaa 121  Q
    |||||||||| ||||| |||  |||||||||| |||||||||||||||||||||    
T  351413 attttcacctttgggtgtacaacatatatacgacaccttgtatttatcttttaa 351360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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