View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6876A_low_131 (Length: 298)

Name: NF6876A_low_131
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6876A_low_131
NF6876A_low_131
[»] chr5 (47 HSPs)
chr5 (9-284)||(31180382-31180667)
chr5 (125-284)||(30631575-30631734)
chr5 (48-283)||(24136017-24136263)
chr5 (114-219)||(1456962-1457067)
chr5 (115-219)||(27445150-27445254)
chr5 (115-219)||(27449994-27450098)
chr5 (115-219)||(43592459-43592563)
chr5 (115-219)||(43598904-43599008)
chr5 (115-219)||(43604396-43604500)
chr5 (115-219)||(43609888-43609992)
chr5 (9-219)||(15044865-15045098)
chr5 (114-284)||(35387830-35387999)
chr5 (114-284)||(38219566-38219735)
chr5 (13-108)||(27445286-27445380)
chr5 (13-108)||(27450129-27450223)
chr5 (8-108)||(1456819-1456919)
chr5 (13-108)||(43592592-43592686)
chr5 (13-108)||(43599037-43599131)
chr5 (13-108)||(43604529-43604623)
chr5 (13-108)||(43610021-43610115)
chr5 (129-225)||(24553307-24553401)
chr5 (47-108)||(37561167-37561228)
chr5 (48-284)||(15464700-15464936)
chr5 (47-218)||(28807296-28807479)
chr5 (104-224)||(11181584-11181705)
chr5 (47-108)||(37556345-37556406)
chr5 (119-225)||(28832480-28832585)
chr5 (50-284)||(36932046-36932279)
chr5 (121-225)||(9353103-9353206)
chr5 (129-225)||(11916752-11916846)
chr5 (105-225)||(14520453-14520574)
chr5 (27-103)||(29751468-29751543)
chr5 (105-225)||(17003712-17003833)
chr5 (47-108)||(2785681-2785742)
chr5 (47-108)||(33768490-33768551)
chr5 (47-108)||(33791622-33791683)
chr5 (158-225)||(31300404-31300469)
chr5 (168-218)||(2785556-2785608)
chr5 (157-217)||(7160712-7160770)
chr5 (129-225)||(12083957-12084051)
chr5 (157-225)||(19588968-19589034)
chr5 (168-218)||(31396843-31396895)
chr5 (168-218)||(31401700-31401752)
chr5 (168-218)||(33768365-33768417)
chr5 (168-218)||(33791497-33791549)
chr5 (121-218)||(37556431-37556527)
chr5 (121-218)||(37561253-37561349)
[»] chr8 (29 HSPs)
chr8 (8-286)||(6311463-6311754)
chr8 (12-284)||(30655815-30656096)
chr8 (13-284)||(18852814-18853095)
chr8 (8-284)||(10688780-10689070)
chr8 (13-284)||(18870208-18870489)
chr8 (8-219)||(7289609-7289831)
chr8 (50-284)||(33037490-33037735)
chr8 (48-284)||(4759754-4760003)
chr8 (8-219)||(25327845-25328058)
chr8 (48-284)||(36979546-36979794)
chr8 (114-284)||(1261714-1261883)
chr8 (121-219)||(25328086-25328184)
chr8 (48-284)||(26288058-26288294)
chr8 (48-284)||(26301315-26301551)
chr8 (48-284)||(26313309-26313545)
chr8 (47-218)||(39784545-39784728)
chr8 (159-284)||(31071035-31071158)
chr8 (105-225)||(7412563-7412684)
chr8 (105-225)||(4456251-4456372)
chr8 (105-225)||(4696361-4696482)
chr8 (121-225)||(5702251-5702354)
chr8 (129-225)||(19175534-19175628)
chr8 (121-221)||(23799347-23799446)
chr8 (47-108)||(35745697-35745758)
chr8 (119-225)||(19752163-19752268)
chr8 (160-225)||(9054231-9054294)
chr8 (168-218)||(10684116-10684168)
chr8 (168-218)||(35745572-35745624)
chr8 (157-225)||(26403035-26403103)
[»] chr7 (33 HSPs)
chr7 (50-284)||(20357231-20357475)
chr7 (48-284)||(2058135-2058385)
chr7 (48-284)||(1533124-1533371)
chr7 (14-217)||(4873310-4873534)
chr7 (8-219)||(12397091-12397324)
chr7 (50-284)||(21639976-21640220)
chr7 (115-219)||(24024128-24024232)
chr7 (129-219)||(31109398-31109489)
chr7 (145-217)||(12406513-12406585)
chr7 (114-284)||(21646174-21646343)
chr7 (114-225)||(18408987-18409099)
chr7 (114-225)||(18413863-18413975)
chr7 (47-108)||(31109291-31109352)
chr7 (8-93)||(12406591-12406676)
chr7 (48-225)||(2479559-2479738)
chr7 (105-225)||(46516060-46516179)
chr7 (121-225)||(23402784-23402887)
chr7 (47-114)||(24024039-24024105)
chr7 (48-103)||(24789647-24789702)
chr7 (105-225)||(4796422-4796542)
chr7 (121-225)||(20284312-20284415)
chr7 (46-108)||(21811958-21812020)
chr7 (105-225)||(2580613-2580733)
chr7 (129-225)||(21989131-21989225)
chr7 (121-225)||(44847896-44847999)
chr7 (157-225)||(2647505-2647571)
chr7 (168-218)||(21812092-21812143)
chr7 (105-225)||(3047477-3047599)
chr7 (121-225)||(47263889-47263992)
chr7 (157-225)||(9184982-9185048)
chr7 (168-218)||(24266054-24266106)
chr7 (27-103)||(1562312-1562386)
chr7 (182-225)||(9189840-9189881)
[»] chr3 (52 HSPs)
chr3 (8-284)||(28503500-28503792)
chr3 (8-284)||(28501333-28501625)
chr3 (50-284)||(2671268-2671514)
chr3 (13-284)||(7167413-7167695)
chr3 (48-284)||(8738743-8738991)
chr3 (48-284)||(9090981-9091229)
chr3 (48-284)||(40372476-40372724)
chr3 (114-284)||(8477533-8477704)
chr3 (115-219)||(22172996-22173100)
chr3 (114-284)||(1306116-1306285)
chr3 (46-108)||(22172900-22172962)
chr3 (48-103)||(27352301-27352356)
chr3 (121-225)||(27986216-27986319)
chr3 (121-218)||(18656614-18656711)
chr3 (132-284)||(32143489-32143637)
chr3 (92-225)||(39032282-39032417)
chr3 (129-284)||(26928368-26928519)
chr3 (105-284)||(33386417-33386595)
chr3 (121-225)||(40592542-40592645)
chr3 (105-225)||(8370231-8370352)
chr3 (48-284)||(27453126-27453359)
chr3 (105-225)||(27974694-27974815)
chr3 (105-225)||(47923646-47923767)
chr3 (121-225)||(1736064-1736167)
chr3 (121-225)||(21711445-21711548)
chr3 (157-225)||(4386774-4386840)
chr3 (129-225)||(16264572-16264666)
chr3 (105-225)||(24694908-24695029)
chr3 (157-225)||(36029316-36029382)
chr3 (119-225)||(6794473-6794578)
chr3 (119-225)||(26299211-26299316)
chr3 (47-105)||(24968426-24968484)
chr3 (47-108)||(2672639-2672700)
chr3 (47-108)||(2676795-2676856)
chr3 (157-225)||(3323488-3323554)
chr3 (157-225)||(3328154-3328220)
chr3 (47-108)||(18656747-18656808)
chr3 (159-225)||(8126853-8126917)
chr3 (157-219)||(23392106-23392166)
chr3 (48-102)||(8477729-8477782)
chr3 (105-225)||(27026929-27027050)
chr3 (121-225)||(37725898-37726001)
chr3 (120-225)||(48438439-48438540)
chr3 (168-218)||(2672783-2672835)
chr3 (168-218)||(2676939-2676991)
chr3 (168-218)||(8512398-8512450)
chr3 (168-218)||(8517278-8517330)
chr3 (184-225)||(10274605-10274646)
chr3 (168-218)||(24968288-24968340)
chr3 (157-225)||(35925701-35925767)
chr3 (9-65)||(22172844-22172899)
chr3 (157-216)||(23410529-23410586)
[»] chr1 (33 HSPs)
chr1 (12-284)||(24787011-24787292)
chr1 (114-284)||(24202529-24202698)
chr1 (122-219)||(41398415-41398513)
chr1 (122-219)||(41390760-41390858)
chr1 (114-284)||(19366068-19366237)
chr1 (114-284)||(19358604-19358772)
chr1 (114-284)||(19361193-19361361)
chr1 (12-102)||(24793833-24793921)
chr1 (47-218)||(25439619-25439801)
chr1 (47-218)||(25444812-25444994)
chr1 (9-117)||(41390895-41391004)
chr1 (9-117)||(41398550-41398659)
chr1 (47-218)||(44023597-44023779)
chr1 (47-218)||(1054734-1054917)
chr1 (47-218)||(39445679-39445862)
chr1 (119-225)||(47098594-47098699)
chr1 (119-225)||(47102608-47102713)
chr1 (121-225)||(13604393-13604496)
chr1 (129-225)||(29652036-29652130)
chr1 (158-225)||(3281930-3281995)
chr1 (119-225)||(9476485-9476590)
chr1 (119-225)||(27104171-27104275)
chr1 (197-284)||(19379916-19380001)
chr1 (129-222)||(21536350-21536441)
chr1 (105-225)||(13598623-13598744)
chr1 (50-103)||(20622544-20622597)
chr1 (105-225)||(32889661-32889782)
chr1 (105-217)||(37069998-37070111)
chr1 (168-218)||(43988314-43988366)
chr1 (182-225)||(16124347-16124388)
chr1 (163-222)||(22819657-22819714)
chr1 (157-225)||(40816622-40816690)
chr1 (157-225)||(47703741-47703809)
[»] chr4 (30 HSPs)
chr4 (48-284)||(24742109-24742357)
chr4 (50-273)||(29760820-29761055)
chr4 (8-219)||(9228867-9229099)
chr4 (115-219)||(51520637-51520741)
chr4 (8-219)||(9224080-9224312)
chr4 (114-219)||(18712566-18712671)
chr4 (47-219)||(3814202-3814386)
chr4 (13-108)||(56141698-56141793)
chr4 (47-218)||(5732844-5733026)
chr4 (114-284)||(28468298-28468467)
chr4 (13-108)||(51520770-51520864)
chr4 (47-218)||(45347537-45347721)
chr4 (8-108)||(18712436-18712536)
chr4 (47-218)||(18855906-18856089)
chr4 (47-218)||(45357018-45357201)
chr4 (48-224)||(31985329-31985506)
chr4 (121-225)||(3777772-3777875)
chr4 (121-225)||(16623064-16623167)
chr4 (105-225)||(5268953-5269074)
chr4 (105-225)||(6743168-6743289)
chr4 (105-225)||(10047604-10047725)
chr4 (160-225)||(5112460-5112523)
chr4 (121-225)||(5396442-5396545)
chr4 (105-225)||(36314983-36315104)
chr4 (105-225)||(36329192-36329313)
chr4 (157-225)||(16628680-16628746)
chr4 (105-225)||(25861786-25861907)
chr4 (129-225)||(8689276-8689370)
chr4 (129-225)||(42599355-42599448)
chr4 (157-224)||(38152246-38152311)
[»] chr2 (30 HSPs)
chr2 (48-284)||(11098607-11098855)
chr2 (48-284)||(14291657-14291905)
chr2 (50-284)||(9296084-9296329)
chr2 (125-219)||(39811799-39811894)
chr2 (48-284)||(3491918-3492154)
chr2 (114-225)||(25409854-25409966)
chr2 (47-108)||(39811697-39811758)
chr2 (47-218)||(32246968-32247153)
chr2 (105-225)||(17865428-17865548)
chr2 (105-225)||(14698762-14698883)
chr2 (129-225)||(23078251-23078345)
chr2 (105-225)||(33118358-33118479)
chr2 (105-225)||(33528377-33528498)
chr2 (129-225)||(40739057-40739151)
chr2 (129-225)||(21630168-21630262)
chr2 (105-225)||(28258930-28259051)
chr2 (129-225)||(34389074-34389168)
chr2 (157-225)||(36757570-36757636)
chr2 (157-225)||(39483156-39483222)
chr2 (121-225)||(20522445-20522548)
chr2 (157-225)||(41586358-41586425)
chr2 (47-108)||(19344728-19344789)
chr2 (47-108)||(19349586-19349647)
chr2 (119-225)||(10445236-10445341)
chr2 (236-284)||(25398663-25398711)
chr2 (236-284)||(25403801-25403849)
chr2 (236-284)||(25407790-25407838)
chr2 (158-225)||(2869501-2869566)
chr2 (156-219)||(29867780-29867840)
chr2 (157-225)||(31056266-31056334)
[»] chr6 (33 HSPs)
chr6 (114-284)||(5674527-5674697)
chr6 (8-219)||(22010370-22010602)
chr6 (115-219)||(11857154-11857258)
chr6 (115-219)||(14737378-14737482)
chr6 (115-219)||(14742238-14742342)
chr6 (8-108)||(11857287-11857386)
chr6 (8-108)||(14737247-14737347)
chr6 (8-108)||(14742107-14742207)
chr6 (47-218)||(28155291-28155475)
chr6 (47-218)||(6438680-6438863)
chr6 (129-284)||(22709176-22709327)
chr6 (50-101)||(5266418-5266469)
chr6 (149-219)||(28184684-28184757)
chr6 (105-225)||(31936798-31936919)
chr6 (104-225)||(5571996-5572117)
chr6 (9-108)||(16839049-16839148)
chr6 (121-225)||(5757249-5757352)
chr6 (157-225)||(5017304-5017370)
chr6 (47-108)||(6005725-6005786)
chr6 (47-108)||(33330153-33330214)
chr6 (47-104)||(5343787-5343844)
chr6 (168-218)||(6005598-6005650)
chr6 (168-218)||(16838925-16838977)
chr6 (157-225)||(22963922-22963988)
chr6 (157-225)||(23824405-23824471)
chr6 (157-225)||(24435780-24435845)
chr6 (157-225)||(31979735-31979801)
chr6 (168-218)||(33330297-33330349)
chr6 (47-108)||(33335650-33335711)
chr6 (168-218)||(33335794-33335846)
chr6 (121-218)||(5343658-5343757)
chr6 (14-86)||(6136288-6136359)
chr6 (157-225)||(21801150-21801218)
[»] scaffold0135 (1 HSPs)
scaffold0135 (8-219)||(34735-34967)
[»] scaffold0188 (2 HSPs)
scaffold0188 (114-284)||(17712-17881)
scaffold0188 (114-284)||(23805-23974)
[»] scaffold0355 (3 HSPs)
scaffold0355 (123-219)||(3657-3754)
scaffold0355 (50-108)||(3560-3618)
scaffold0355 (184-219)||(9514-9549)
[»] scaffold0140 (1 HSPs)
scaffold0140 (121-284)||(8188-8348)
[»] scaffold0464 (1 HSPs)
scaffold0464 (47-218)||(542-725)
[»] scaffold0087 (2 HSPs)
scaffold0087 (105-225)||(36585-36706)
scaffold0087 (121-225)||(43732-43835)
[»] scaffold0006 (3 HSPs)
scaffold0006 (121-225)||(133050-133153)
scaffold0006 (105-225)||(5908-6029)
scaffold0006 (105-225)||(2717-2837)
[»] scaffold0036 (1 HSPs)
scaffold0036 (129-225)||(85906-86000)
[»] scaffold0259 (2 HSPs)
scaffold0259 (9-105)||(1921-2017)
scaffold0259 (168-218)||(2103-2155)
[»] scaffold0028 (2 HSPs)
scaffold0028 (9-105)||(148626-148722)
scaffold0028 (168-218)||(148808-148860)
[»] scaffold0197 (3 HSPs)
scaffold0197 (168-218)||(14161-14213)
scaffold0197 (48-108)||(18885-18945)
scaffold0197 (168-217)||(19017-19068)
[»] scaffold0009 (1 HSPs)
scaffold0009 (168-218)||(176829-176881)


Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 9 - 284
Target Start/End: Complemental strand, 31180667 - 31180382
Alignment:
Q  9 gtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||| ||||||||||| |  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31180667 gtcaaccttgggtcagacgcaaatcgtgacatgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 31180568  T
Q  109 gaagt----------agagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaa 198  Q
    ||||           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31180567 gaagcggggcttggaagagcttagagagagaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaa 31180468  T
Q  199 aacattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||| |||||||    
T  31180467 aacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttatggttcat 31180382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 125 - 284
Target Start/End: Complemental strand, 30631734 - 30631575
Alignment:
Q  125 agagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt-g 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  30631734 agagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgg 30631635  T
Q  224 aggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  30631634 aggagttcattagttggaaggatctaaagcttcctctagtgacttctc-tttagggttcat 30631575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 48 - 283
Target Start/End: Complemental strand, 24136263 - 24136017
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc-tttttgaagtagagctt----------agagagagaa-cttgg 135  Q
    |||||||||||||||||||  |||||||||  ||||||||||  |||||||||||| |||||| ||||||||||          |||||||||| |||||    
T  24136263 ggaaatcgtggcacgattgtatcagaggaaagctagtatataaagtgttcttgtgcatttttggagtagagcttggaagagctaagagagagaaacttgg 24136164  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattg 235  Q
    || ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  24136163 attacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttca-cc 24136065  T
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttca 283  Q
     |||||||||| ||||||||||||||| | ||||||||||||||||||    
T  24136064 attggaaggatctaaagcttcctctagtgtcttctcttttagggttca 24136017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 1456962 - 1457067
Alignment:
Q  114 agagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 213  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1456962 agagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 1457061  T
Q  214 ttgggt 219  Q
    ||||||    
T  1457062 ttgggt 1457067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 27445254 - 27445150
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445254 gagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 27445155  T
Q  215 tgggt 219  Q
    |||||    
T  27445154 tgggt 27445150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 27450098 - 27449994
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27450098 gagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 27449999  T
Q  215 tgggt 219  Q
    |||||    
T  27449998 tgggt 27449994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 43592563 - 43592459
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592563 gagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 43592464  T
Q  215 tgggt 219  Q
    |||||    
T  43592463 tgggt 43592459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 43599008 - 43598904
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43599008 gagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 43598909  T
Q  215 tgggt 219  Q
    |||||    
T  43598908 tgggt 43598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 43604500 - 43604396
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604500 gagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 43604401  T
Q  215 tgggt 219  Q
    |||||    
T  43604400 tgggt 43604396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 43609992 - 43609888
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609992 gagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 43609893  T
Q  215 tgggt 219  Q
    |||||    
T  43609892 tgggt 43609888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 15045098 - 15044865
Alignment:
Q  9 gtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttt-t 107  Q
    |||||||| ||||| | |||| ||||||| || ||   ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |    
T  15045098 gtcaacctggggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttt 15044999  T
Q  108 tgaagtagagcttag---------------------agagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 186  Q
    ||||| ||| ||||                      |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15044998 tgaagaagaacttaagagagcttgtatgagctttgtagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 15044899  T
Q  187 tggg-ttgggaaaaacattgtaatcaccttgggt 219  Q
    |||| |||||||||||||||||||||||||||||    
T  15044898 tgggtttgggaaaaacattgtaatcaccttgggt 15044865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 114 - 284
Target Start/End: Complemental strand, 35387999 - 35387830
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    |||||||||||||| || ||||||| ||||||||||||||    ||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  35387999 agagcttagagagaaaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggaaaaaacattgtaatcac 35387900  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| |||| |||||||||| | |||||||||||||||||||    
T  35387899 cttgggtagtga-gatttca-ccattggaaggatctaaaacttcctctagtgtcttctcttttagggttcat 35387830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 114 - 284
Target Start/End: Complemental strand, 38219735 - 38219566
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||||||||||| |||    
T  38219735 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacac 38219636  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| ||||||||||||| | | |||||||||||||||||||    
T  38219635 cttgggtagtga-gatttca-ccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 38219566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 27445380 - 27445286
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27445380 accttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgcttttt 27445286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 27450223 - 27450129
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27450223 accttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgcttttt 27450129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 1456819 - 1456919
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    |||| ||||||||||||||||||||||||| ||  |  |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  1456819 tgtctaccttgggtcagatgcaaatcgtgacacggtcttgggaaatcgtggcacgatttctttagaggaagactagtatatattgtgttcttgtgctttt 1456918  T
Q  108 t 108  Q
    |    
T  1456919 t 1456919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 43592686 - 43592592
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||| ||||||||||| || ||| |||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  43592686 accttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtgacacgattgcttcggaggaaggctagtatatattgtgttcttgtgcttttt 43592592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 43599131 - 43599037
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||| ||||||||||| || ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  43599131 accttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtgtttttt 43599037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 43604623 - 43604529
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||| ||||||||||| || ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  43604623 accttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtgtttttt 43604529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 43610115 - 43610021
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||| ||||||||||| || ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  43610115 accttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtgtttttt 43610021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 24553307 - 24553401
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||  | ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||||||||    
T  24553307 aacttggattacaaaggaggtaacttaagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggtagtgag 24553401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 37561167 - 37561228
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | |||||||||||||||||||||||||||||||    
T  37561167 gggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttt 37561228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 284
Target Start/End: Complemental strand, 15464936 - 15464700
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct--ttttgaagtagagctt--agagagagaa-cttggataacaa 142  Q
    ||||||||||||||||||   ||||  |||||||||||| ||  ||||||||||||   ||||| || |||||||  |||||||||| ||||||| ||||    
T  15464936 ggaaatcgtggcacgattttatcagtagaagactagtatttaa-gtgttcttgtgcagattttggaggagagcttgaagagagagaaacttggattacaa 15464838  T
Q  143 aggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttggaa 242  Q
    || ||| |||    ||||||||||||||||| | |||  ||||||||||||||  |||||| |||| ||||||||||||||| || ||||    ||||||    
T  15464837 agaaggaaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacatcgtaaacaccttgggtagtga-gatttca-ccattggaa 15464742  T
Q  243 ggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||  |||||||||| | | | |||||||||||||||||||    
T  15464741 ggatcaaaagcttccttttgtgtcttctcttttagggttcat 15464700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 28807296 - 28807479
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt-gaagt----------agagctta-gagagagaacttg 134  Q
    ||||| ||||||||||||| |||||| | | |||||||||||||| |||||||||||||||| ||||           |||||||| |||||| ||||||    
T  28807296 gggaactcgtggcacgatttcttcagggcaggactagtatatattatgttcttgtgcttttttgaagagaaccttaagagagcttaagagagaaaacttg 28807395  T
Q  135 gataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    || | |||||  |||| ||  |||| || ||  ||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  28807396 gagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 28807479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 11181584 - 11181705
Alignment:
Q  104 tttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 200  Q
    |||||||||||||||||  |||||||||| ||||| | |||||||||| |||     |||||||||||||||| | |||  ||||||||||||||  |||    
T  11181584 tttttgaagtagagcttgaagagagagaaacttggtttacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgggttggg--aaa 11181681  T
Q  201 cattgtaatcaccttgggtagtga 224  Q
    |||||||| |||||||||||||||    
T  11181682 cattgtaaacaccttgggtagtga 11181705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 37556345 - 37556406
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    |||||||| |||||||||| |||||| | | |||||||||||||||||||||||||||||||    
T  37556345 gggaaatcatggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttt 37556406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 28832585 - 28832480
Alignment:
Q  119 ttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||| ||||||| |||||||||| |||    | ||||||||||||||| | |||  |||||||||||||||||  |||||||| ||||||||    
T  28832585 ttagagagagaaacttggattacaaaggaggtaactttagagttgagtgtctttgtagtgaggttctcttgggttgggaaa--cattgtaaacaccttgg 28832488  T
Q  218 gtagtgag 225  Q
    ||||||||    
T  28832487 gtagtgag 28832480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 284
Target Start/End: Original strand, 36932046 - 36932279
Alignment:
Q  50 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc--tttttgaagtagagctta-gagagagaa-cttggataacaaagg 145  Q
    ||||||||||||||||   ||||  ||||||| |||| ||  ||||||||||||  |||||| || |||||| | ||||||||| |||||||  ||||||    
T  36932046 aaatcgtggcacgattttatcagctgaagactggtatttaa-gtgttcttgtgcagtttttggaggagagctgaagagagagaaacttggattgcaaagg 36932144  T
Q  146 agggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttggaagga 245  Q
    |||||||    ||||||||||||||| | | ||   |||||||||||||||||  |||||||| ||||||||||||||| || ||||    |||||||||    
T  36932145 agggaactttagggttgagtgtctttatagtgatgatctcttgggttgggaaa--cattgtaaacaccttgggtagtga-gatttca-ccattggaagga 36932240  T
Q  246 tttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |  |||||||||||| | | ||||| |||||||||||||    
T  36932241 tcaaaagcttcctcttgtgtcttctgttttagggttcat 36932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 9353103 - 9353206
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||| ||||||||||| | |||  |||||||||||||||||  |||||||| ||||||||||    
T  9353103 agagagagaaacttggattacaaaggaggtaactttagggttaagtgtctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgggt 9353200  T
Q  220 agtgag 225  Q
    ||||||    
T  9353201 agtgag 9353206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 11916752 - 11916846
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||    ||||||||| ||||||| | |||  |||||||||||||||||  |||||||| ||||||||||||||||    
T  11916752 aacttggattacaaaggaggtaactttagggttgagtttctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 11916846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 14520574 - 14520453
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||| ||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||    
T  14520574 ttttgaaggagagcttgaagagagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaac 14520477  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| |||||||| |||||||    
T  14520476 attgtaaacaccttggatagtgag 14520453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 29751543 - 29751468
Alignment:
Q  27 gcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 103  Q
    ||||||||||| || ||| ||| |||||||| ||||||||||| |||||||| ||||||||||  ||||||||||||    
T  29751543 gcaaatcgtgacacgatt-tggaaaatcgtgacacgattgctttagaggaaggctagtatataaagtgttcttgtgc 29751468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 17003712 - 17003833
Alignment:
Q  105 ttttgaagtagagcttagagagaga---acttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| ||||||| ||||||||   |||||||| |||||||||  |||    ||||||| ||||||||| | |||  ||||||||||| |||||  |    
T  17003712 ttttgaaggagagctttgagagagagaaacttggattacaaaggagataactttagggttgaatgtctttgtagtgaggttctcttgggtttggaaa--c 17003809  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  17003810 attgtaaacaccttgggtagtgag 17003833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 2785742 - 2785681
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  2785742 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttt 2785681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 33768551 - 33768490
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  33768551 gggaaatcgtggcacgatttcttcagggcatgactagtatttaaagtgttcttgtgcttttt 33768490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 33791683 - 33791622
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  33791683 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttt 33791622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 31300404 - 31300469
Alignment:
Q  158 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    |||||||||||||||| | |||  |||||||||||| ||||  |||||||| ||||||||||||||||    
T  31300404 ggttgagtgtctttgtagtgaggttctcttgggttgagaaa--cattgtaaacaccttgggtagtgag 31300469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 2785608 - 2785556
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  2785608 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 2785556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 7160712 - 7160770
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    ||||||||||||||||| | |||  |||||||| |||||  ||||||||||||||||||||    
T  7160712 gggttgagtgtctttgtagtgaggttctcttggattggg--aaacattgtaatcaccttgg 7160770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 12083957 - 12084051
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||    ||||||||||||||| | | |||  ||||||||||||| |||  |||| ||| ||||||||||||||||    
T  12083957 aacttggattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttggtaaa--cattttaaacaccttgggtagtgag 12084051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 19589034 - 19588968
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| || |||||| ||||||    
T  19589034 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacatcttgggcagtgag 19588968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 31396843 - 31396895
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  31396843 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 31396895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 31401700 - 31401752
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  31401700 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 31401752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 33768417 - 33768365
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  33768417 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 33768365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 33791549 - 33791497
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  33791549 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 33791497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 37556431 - 37556527
Alignment:
Q  121 agagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    ||||||| |||||||| | |||||  |||| || ||||| || ||  ||||| || |||||| |||| ||||||||||| ||||||||||||||||||    
T  37556431 agagagaaaacttggagatcaaagaggggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttgggaaaa-cattgtaatcaccttggg 37556527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 37561253 - 37561349
Alignment:
Q  121 agagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    ||||||| |||||||| | |||||  |||| || ||||| || ||  ||||| || |||||| |||| ||||||||||| ||||||||||||||||||    
T  37561253 agagagaaaacttggagatcaaagaggggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttgggaaaa-cattgtaatcaccttggg 37561349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 286
Target Start/End: Complemental strand, 6311754 - 6311463
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  6311754 tgtcaaccttgggtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgctttt 6311655  T
Q  108 tgaagt-----------agagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggga 196  Q
    |  ||            |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6311654 ttgagagagagcttggaagagcttagagatagaacttggatagcaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttggga 6311555  T
Q  197 aaaacattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctc--ttttagggttcatct 286  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||||||  |||||||||||||||    
T  6311554 aaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatcaaaagcttcctctagtgacttctcttttttagggttcatct 6311463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 12 - 284
Target Start/End: Complemental strand, 30656096 - 30655815
Alignment:
Q  12 aaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt-ga 110  Q
    |||||||||||||| ||||||||||| || ||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  30656096 aaccttgggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgtttttttga 30655999  T
Q  111 agtagagcttaga----------gagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 200  Q
    || ||||||| ||          |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30655998 aggagagcttggaagagcttaaagagagaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 30655899  T
Q  201 cattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  30655898 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 30655815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 284
Target Start/End: Original strand, 18852814 - 18853095
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt-gaa 111  Q
    ||||||||||||| ||| ||||||| || |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18852814 accttgggtcagacgcagatcgtgacacgattt--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttgaa 18852911  T
Q  112 gtagagctt----------agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 200  Q
    | |||||||          |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18852912 ggagagcttggaagagcttagagagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 18853011  T
Q  201 cattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
     ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  18853012 tattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 18853095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 284
Target Start/End: Original strand, 10688780 - 10689070
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct-tt 106  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  ||    
T  10688780 tgtcaaccttgggtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgcagtt 10688879  T
Q  107 ttgaagtagagctt----------agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggg 195  Q
    |||||  |||||||          ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  10688880 ttgaaagagagcttggaagagctaagaaagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggg 10688979  T
Q  196 aaaaacattgtaatcaccttgggtagtgaggagttcattggtt--ggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||||||||||||||||||||||||||||||| |||  || ||||| ||||||||||||||| | |||||||||||||||||||    
T  10688980 aaaaacattgtaatcaccttgggtagtgaggagttcattagttgggggaggatctaaagcttcctctagtgtcttctcttttagggttcat 10689070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 13 - 284
Target Start/End: Original strand, 18870208 - 18870489
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt-gaa 111  Q
    ||||||||||||| ||| ||||||| || |||   | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  18870208 accttgggtcagacgcagatcgtgacacgattt--gaaaatcgtggcacgattgcttcagagaaagactagtatatattgtgttcttgtgcttttttgaa 18870305  T
Q  112 gtagagctt----------agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 200  Q
    | |||||||          |||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18870306 ggagagcttggaagagcttagagagagaaacatggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 18870405  T
Q  201 cattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  18870406 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 18870489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 7289609 - 7289831
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    |||| ||||||| ||||||||||||||||| || ||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7289609 tgtctaccttggatcagatgcaaatcgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgctttt 7289708  T
Q  108 t-gaa----------gtagagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggga 196  Q
    | |||          | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289709 ttgaaagagagcttggaagagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggga 7289808  T
Q  197 aaaacattgtaatcaccttgggt 219  Q
    |||||||||||||||||||||||    
T  7289809 aaaacattgtaatcaccttgggt 7289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 50 - 284
Target Start/End: Original strand, 33037490 - 33037735
Alignment:
Q  50 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt-gaagtagagctt----------agagagagaa-cttggat 137  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| |||| |||||||          |||||||||| |||||||    
T  33037490 aaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgcttttttgaaggagagcttggaagagcttagagagagaaacttggat 33037589  T
Q  138 aacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggt 237  Q
     ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33037590 tacaaaggagggaaccaaagggttgagtgtcttcgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagt 33037689  T
Q  238 tggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||| ||||||||||||||| | |||||| ||||||||||||    
T  33037690 tggaaggatctaaagcttcctctagtgtcttctc-tttagggttcat 33037735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 48 - 284
Target Start/End: Original strand, 4759754 - 4760003
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctt-tttgaagtagagctt----------agagagagaa-cttgg 135  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||          |||||||||| |||||    
T  4759754 ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcttgtttgaaggagagcttggaagagcttagagagagaatcttgg 4759853  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaa-acattgtaatcaccttgggtagtgaggagttcatt 234  Q
    ||  ||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4759854 attgcaaaggaggtaaccaaagggttgagtgtctttgtagagagagtctcttgggttgggaaaaaacattgtaatcaccttgggtagtgaggagttcatt 4759953  T
Q  235 ggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
     ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  4759954 agttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 4760003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 25327845 - 25328058
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    ||||||||||||||| | ||||  |||||| || ||   ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  25327845 tgtcaaccttgggtccgttgcagctcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgctttt 25327944  T
Q  108 t-gaagtagagctta-gagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattg 205  Q
    | |||| ||| |||| ||||||||||||||| | ||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  25327945 ttgaagaagaacttaagagagagaacttggagatcaaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattg 25328044  T
Q  206 taatcaccttgggt 219  Q
    ||||||||||||||    
T  25328045 taatcaccttgggt 25328058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 48 - 284
Target Start/End: Complemental strand, 36979794 - 36979546
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg--cttttt----gaagt-------agagcttagagagagaa-ctt 133  Q
    ||||||||||||||||||||||||||||||| ||||||| ||  |||||||||||  ||||||    ||||        ||||||||||||||||| |||    
T  36979794 ggaaatcgtggcacgattgcttcagaggaaggctagtatttaa-gtgttcttgtgttcttttttggagaagagcttggaagagcttagagagagaaactt 36979696  T
Q  134 ggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcat 233  Q
    |||| |||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  36979695 ggattacaaagaagggaaccaaagggttgagtgtctttgtagagagtgtctcttaggttgggaaaa-cattgtaatcaccttgggtagtgaggagttcat 36979597  T
Q  234 tggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    | ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  36979596 tagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 36979546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 114 - 284
Target Start/End: Original strand, 1261714 - 1261883
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  1261714 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcac 1261813  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| ||||||||||||||| | |||||||||||||||||||    
T  1261814 cttgggtagtga-gatttca-ccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 1261883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 25328086 - 25328184
Alignment:
Q  121 agagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||||||||| | ||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25328086 agagagagaacttggagatcaaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 25328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 284
Target Start/End: Complemental strand, 26288294 - 26288058
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct--ttttgaagtagagcttagagagagaa-cttggataacaaag 144  Q
    |||||||||| |||||||   |||| ||||| ||||||| ||  ||||||||||||   ||||| || ||||||||||||||||| ||||||| ||||||    
T  26288294 ggaaatcgtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagattttggagaagagcttagagagagaaacttggattacaaag 26288196  T
Q  145 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttggaagg 244  Q
    | ||||||    ||||||| ||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||||||| || ||||    ||||||||    
T  26288195 gggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggtagtga-gatttca-ccattggaagg 26288098  T
Q  245 atttaaagcttcctctagggacttctcttttagggttcat 284  Q
    || ||||||||||||| | | |||||||||||||||||||    
T  26288097 atctaaagcttcctcttgtgtcttctcttttagggttcat 26288058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 284
Target Start/End: Complemental strand, 26301551 - 26301315
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct--ttttgaagtagagcttagagagagaa-cttggataacaaag 144  Q
    |||||||||| |||||||   |||| ||||| ||||||| ||  ||||||||||||   ||||| || ||||||||||||||||| ||||||| ||||||    
T  26301551 ggaaatcgtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagattttggagaagagcttagagagagaaacttggattacaaag 26301453  T
Q  145 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttggaagg 244  Q
    | ||||||    ||||||| ||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||||||| || ||||    ||||||||    
T  26301452 gggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggtagtga-gatttca-ccattggaagg 26301355  T
Q  245 atttaaagcttcctctagggacttctcttttagggttcat 284  Q
    || ||||||||||||| | | |||||||||||||||||||    
T  26301354 atctaaagcttcctcttgtgtcttctcttttagggttcat 26301315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 284
Target Start/End: Complemental strand, 26313545 - 26313309
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct--ttttgaagtagagcttagagagagaa-cttggataacaaag 144  Q
    |||||||||| |||||||   |||| ||||| ||||||| ||  ||||||||||||   ||||| || ||||||||||||||||| ||||||| ||||||    
T  26313545 ggaaatcgtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagattttggagaagagcttagagagagaaacttggattacaaag 26313447  T
Q  145 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttggaagg 244  Q
    | ||||||    ||||||| ||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||||||| || ||||    ||||||||    
T  26313446 gggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggtagtga-gatttca-ccattggaagg 26313349  T
Q  245 atttaaagcttcctctagggacttctcttttagggttcat 284  Q
    || ||||||||||||| | | |||||||||||||||||||    
T  26313348 atctaaagcttcctcttgtgtcttctcttttagggttcat 26313309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 39784545 - 39784728
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc-tttttgaag----------tagagctt-agagagagaacttg 134  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||           ||||||| ||||||| | ||||    
T  39784545 gggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagagaaccttaagagagcttaagagagaaatcttg 39784644  T
Q  135 gataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    || | |||||  |||| || ||||| || ||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  39784645 gagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtctcttaggttgggaaaaacattgtaatcaccttggg 39784728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 31071035 - 31071158
Alignment:
Q  159 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcct 258  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||||||||| || ||||    |||||||||| | |||||||||    
T  31071035 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtga-gatttca-ccattggaaggatcttaagcttcct 31071132  T
Q  259 ctagggacttctcttttagggttcat 284  Q
    || | | |||||||||||||||||||    
T  31071133 cttgtgtcttctcttttagggttcat 31071158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 7412684 - 7412563
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| |||||  ||||||||||||||  ||||    
T  7412684 ttttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttggg--aaac 7412587  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  7412586 attgtaaacaccttgggtagtgag 7412563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 4456372 - 4456251
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||| ||| | |||  |||||||||||||||||  |    
T  4456372 ttttgaagaagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctctgtagtgaggatctcttgggttgggaaa--c 4456275  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  4456274 attgtaaacaccttgggtagtgag 4456251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 4696361 - 4696482
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||  |||    ||||||||||||||||| | |||  ||||||||||||||  ||||    
T  4696361 ttttgaaggagagcttgaagagagagaaacttggattacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaac 4696458  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  4696459 attgtaaacaccttgggtagtgag 4696482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 5702251 - 5702354
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||| ||||||| ||||||||||    
T  5702251 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaatattgtaaacaccttgggt 5702348  T
Q  220 agtgag 225  Q
    ||||||    
T  5702349 agtgag 5702354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 19175534 - 19175628
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||    ||||||||||||||||| | |||  |||||||| ||||||||  |||||||| ||||||||||||||||    
T  19175534 aacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattgggaaa--cattgtaaacaccttgggtagtgag 19175628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 23799347 - 23799446
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| |||||  ||||||||||||||   |||||||||| ||||||| ||    
T  23799347 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttggg--gaacattgtaaacaccttgagt 23799444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 35745758 - 35745697
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  35745758 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttt 35745697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 19752163 - 19752268
Alignment:
Q  119 ttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||| |||||||  ||||||||| |||    ||||||||||||||||| | |||  |||||||||||| |  ||| ||||||| ||||||||    
T  19752163 ttagagagagaaacttggatcgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgtg--aaatattgtaaacaccttgg 19752260  T
Q  218 gtagtgag 225  Q
    ||||||||    
T  19752261 gtagtgag 19752268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 9054231 - 9054294
Alignment:
Q  160 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    |||||||| ||||| | |||  |||||||||||||  |||||||| ||||||||||||||||||||    
T  9054231 ttgagtgtttttgtagtgagattctcttgggttgg--aaaacattataatcaccttgggtagtgag 9054294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 10684116 - 10684168
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  10684116 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 10684168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 35745624 - 35745572
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  35745624 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 35745572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 26403035 - 26403103
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  26403035 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 26403103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 50 - 284
Target Start/End: Original strand, 20357231 - 20357475
Alignment:
Q  50 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttttgaag----------tagagcttagagagagaacttggataa 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||| ||||||||||||||||    
T  20357231 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttttgaaggagagcttggtagagcttagtgagagaacttggataa 20357330  T
Q  140 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttg 239  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20357331 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttg 20357430  T
Q  240 gaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||    
T  20357431 gaaggatctaaagcttcctctagtgtcttctcttttagggttcat 20357475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 48 - 284
Target Start/End: Complemental strand, 2058385 - 2058135
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctt-tttgaa-----------gtagagcttagagagagaacttgg 135  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   ||||||           | ||||||||||||||||||||||    
T  2058385 ggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgcagatttgaaaagagagcttggaagagcttagagagagaacttgg 2058286  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattg 235  Q
    || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2058285 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatta 2058186  T
Q  236 gtt--ggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||  || ||||| ||||||||||||||| | |||||||||||||||||||    
T  2058185 gttgggggaggatctaaagcttcctctagtgtcttctcttttagggttcat 2058135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 48 - 284
Target Start/End: Original strand, 1533124 - 1533371
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctt-tttgaagtagagctt----------agagagagaa-cttgg 135  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |   ||||| | |||||||          |||||||||| |||||    
T  1533124 ggaaatcgtggcacgattgcttcagaggaaggctagtatatatagtgttcttgtacagatttgagggagagcttggaagagcttagagagagaaacttgg 1533223  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattg 235  Q
    || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  1533224 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttca-cc 1533322  T
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
     |||||||||| ||||||||||||||| | |||||||||||||||||||    
T  1533323 attggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 1533371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 4873534 - 4873310
Alignment:
Q  14 ccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt-tgaag 112  Q
    ||||||||| | |||||||||||| || ||   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  4873534 ccttgggtccgttgcaaatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 4873435  T
Q  113 taga--------------------gcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtt 192  Q
     |||                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4873434 aagaacttaagagagcttggaagagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtt 4873335  T
Q  193 gggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||||||||||||||||    
T  4873334 gggaaaaacattgtaatcaccttgg 4873310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 12397324 - 12397091
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc--tt 105  Q
    |||| |||||||||| | |||||||||||| || |||  ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  ||    
T  12397324 tgtctaccttgggtccgttgcaaatcgtgacacgatttggggaaatcgtggcacgatttcttcagaggaatactagtatatattgtgttcttgtgccttt 12397225  T
Q  106 tttgaagtaga--------------------gcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctc 185  Q
    ||||||| |||                    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12397224 tttgaagaagaacttaagagagcttgtatgagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctc 12397125  T
Q  186 ttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    ||||||||||||||||||||||||||||||||||    
T  12397124 ttgggttgggaaaaacattgtaatcaccttgggt 12397091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 50 - 284
Target Start/End: Complemental strand, 21640220 - 21639976
Alignment:
Q  50 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct-ttttgaagtagagctt----------agagagagaa-cttggat 137  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||||||          |||||||||| |||||||    
T  21640220 aaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgctattttgaaggagagcttggaagagcttagagagagaaacttggat 21640121  T
Q  138 aacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggt 237  Q
     ||||||||||||||    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||| || ||||    |    
T  21640120 tacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtga-gatttca-ccat 21640023  T
Q  238 tggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||    
T  21640022 tggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 21639976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 24024128 - 24024232
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  24024128 gagctttgagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttggaaaaacattgtaatcaccg 24024227  T
Q  215 tgggt 219  Q
    |||||    
T  24024228 tgggt 24024232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 31109398 - 31109489
Alignment:
Q  129 aacttggataacaaaggagggaacca-atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109398 aacttggatagcaaaggagggaaccatatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 31109489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 12406585 - 12406513
Alignment:
Q  145 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406585 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 12406513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 114 - 284
Target Start/End: Complemental strand, 21646343 - 21646174
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||| ||| |||||||||| |||    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| |||    
T  21646343 agagcttagagagagaaacttagattacaaaggaggaaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacac 21646244  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| |||| |||||||||| | |||||||||||||||||||    
T  21646243 cttgggtagtga-gatttca-ccattggaaggatctaaatcttcctctagtgtcttctcttttagggttcat 21646174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 18409099 - 18408987
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||| ||| ||||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||||||||||| |||    
T  18409099 agagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacac 18409000  T
Q  213 cttgggtagtgag 225  Q
    |||||||||||||    
T  18408999 cttgggtagtgag 18408987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 18413975 - 18413863
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||||| ||||| |||    
T  18413975 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacaatgtaaacac 18413876  T
Q  213 cttgggtagtgag 225  Q
    |||||||||||||    
T  18413875 cttgggtagtgag 18413863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 31109291 - 31109352
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31109291 gggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttt 31109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 12406676 - 12406591
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgt 93  Q
    |||| |||||||||| | |||||||||||| || |||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  12406676 tgtctaccttgggtccgttgcaaatcgtgacacgatttggggaaatcgtggcacgatttcttcagaggaagactagtatatattgt 12406591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 225
Target Start/End: Complemental strand, 2479738 - 2479559
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct--ttttgaagtagagctt--agagagagaa-cttggataacaa 142  Q
    ||||| ||||||||||||   ||||  |||||||||||||||  ||||||||||||   ||||| || |||||||  |||||||||| ||||||| ||||    
T  2479738 ggaaaacgtggcacgattttatcagttgaagactagtatataa-gtgttcttgtgcagattttggagaagagcttgaagagagagaaacttggattacaa 2479640  T
Q  143 aggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||    ||||||||||||||| | | |||  |||||||||||||||||  |||||||| ||||||||||||||||    
T  2479639 aggagggaactttagggttgagtgtctttatagtgaggatctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 2479559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 46516060 - 46516179
Alignment:
Q  105 ttttgaagtagagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacat 203  Q
    ||||||||  |||||||||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||| |||||||||  |||    
T  46516060 ttttgaaggggagcttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgagttgggaaa--cat 46516157  T
Q  204 tgtaatcaccttgggtagtgag 225  Q
    ||||| ||||||||||||||||    
T  46516158 tgtaaacaccttgggtagtgag 46516179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 23402784 - 23402887
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  23402784 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 23402881  T
Q  220 agtgag 225  Q
    ||||||    
T  23402882 agtgag 23402887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 24024039 - 24024105
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc-tttttgaagta 114  Q
    ||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||| |||||||||||    
T  24024039 gggaaatcgtggcacgatttcttcaggggaagactagtatata--gtgttcttgtgcttttttgaagta 24024105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 24789647 - 24789702
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 103  Q
    |||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||    
T  24789647 ggaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 24789702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 4796422 - 4796542
Alignment:
Q  105 ttttgaagtagagcttagagagaga---acttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| ||||||| ||| ||||   |||||||| |||||||||| |||   | |||||||||||||||| | |||  |||||||||||||  |||||    
T  4796422 ttttgaagaagagcttggagtgagagaaacttggattacaaaggaggtaactt-taggttgagtgtctttgtagtgaggatctcttgggttgg--aaaac 4796518  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  4796519 attgtaaacaccttgggtagtgag 4796542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 20284415 - 20284312
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| | |||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  20284415 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 20284318  T
Q  220 agtgag 225  Q
    ||||||    
T  20284317 agtgag 20284312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 21811958 - 21812020
Alignment:
Q  46 tgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||||   |||| | | |||||||||||||||||||||||||||||||    
T  21811958 tgggaaatcgtggcacgatttactcagggcaggactagtatatattgtgttcttgtgcttttt 21812020  T

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Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 2580733 - 2580613
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    ||||||||||||| ||  |||||||||| |||||||  ||||||||| |||    ||||||||||||||||| | |||  |||||||||||||  |||||    
T  2580733 ttttgaagtagaggttttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgt-gtgaggttctcttgggttgg--aaaac 2580637  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  2580636 attgtaaacaccttgggtagtgag 2580613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 21989225 - 21989131
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||    || |||||||||||||| | |||  |||||||||||||||||  |||||||| ||||||||||||||||    
T  21989225 aacttggattacaaaggaggtaactttaggtttgagtgtctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 21989131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 44847896 - 44847999
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| | |||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| |||||||| |    
T  44847896 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttggat 44847993  T
Q  220 agtgag 225  Q
    ||||||    
T  44847994 agtgag 44847999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 2647505 - 2647571
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  ||||||||||||||  |||||| |||| ||||||||||||||||    
T  2647505 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacatggtaagcaccttgggtagtgag 2647571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 21812092 - 21812143
Alignment:
Q  168 ctttgttgagagtgtctcttgggttggg-aaaaacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||| |||||||||||||||||||||||    
T  21812092 ctttgatgagagtgtttcttaggttggggaaaaacattgtaatcaccttggg 21812143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 3047599 - 3047477
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttgg-ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 200  Q
    |||||||| |||||||  |||||||||| ||||| || |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  |||    
T  3047599 ttttgaagaagagctttaagagagagaaacttgggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaa 3047502  T
Q  201 cattgtaatcaccttgggtagtgag 225  Q
    || | |||||| |||||||||||||    
T  3047501 cactataatcatcttgggtagtgag 3047477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 47263992 - 47263889
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| | |||||||| |||    ||||||||||||||||| | |||  |||||| |||||||  |||||||||||  |||||||||    
T  47263992 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttcggttggg--aaacattgtaaataccttgggt 47263895  T
Q  220 agtgag 225  Q
    ||||||    
T  47263894 agtgag 47263889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 9184982 - 9185048
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| ||||||| |  ||  |||||||||||||||||  |||||||| ||||||||||||||||    
T  9184982 gggttgagtatctttgtagtaaggttctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 9185048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 24266054 - 24266106
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  24266054 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 24266106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 1562386 - 1562312
Alignment:
Q  27 gcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 103  Q
    ||||||||||| || |||| || |||||||| ||||||||   ||||||||||||||||| || |||||||||||||    
T  1562386 gcaaatcgtgacacgattg-ggaaaatcgtgacacgattggaacagaggaagactagtattta-tgtgttcttgtgc 1562312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 9189840 - 9189881
Alignment:
Q  182 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  9189840 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 9189881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 8 - 284
Target Start/End: Original strand, 28503500 - 28503792
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    |||||||||||||||||| ||||||||||| || ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28503500 tgtcaaccttgggtcagacgcaaatcgtgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 28503599  T
Q  108 t-gaagtagagctt--------------agagagagaacttggataacaaaggagggaaccaat-gggttgagtgtctttgttgagagtgtctcttgggt 191  Q
    | |||| |||||||              |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  28503600 ttgaaggagagcttggaagagcttagagagagagagaacttggataacaaaggagggaaccaaaagggttgagtgtctttgttgagagtgtctcttgggt 28503699  T
Q  192 tgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  28503700 tgggaaaaatattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgacttctcttttagggttcat 28503792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 8 - 284
Target Start/End: Original strand, 28501333 - 28501625
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    |||||||||||||||||| ||||||| ||| || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28501333 tgtcaaccttgggtcagacgcaaatcatgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtacttgtgctttt 28501432  T
Q  108 t-gaagtagagctt--------------agagagagaacttggataacaaaggagggaaccaat-gggttgagtgtctttgttgagagtgtctcttgggt 191  Q
    | |||| |||||||              |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  28501433 ttgaaggagagcttggaagagcttagagagagagagaacttggataacaaaggagggaaccaaaagggatgagtgtctttgttgagagtgtctcttgggt 28501532  T
Q  192 tgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  28501533 tgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgacttctcttttagggttcat 28501625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 50 - 284
Target Start/End: Original strand, 2671268 - 2671514
Alignment:
Q  50 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc---tttttgaa--------gtagagcttagagagagaa-cttggat 137  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||   ||| ||||        | ||||||||||||||||| |||||||    
T  2671268 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcagatttgtgaaagagcttggaagagcttagagagagaaacttggat 2671367  T
Q  138 aacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggt 237  Q
     ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2671368 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagt 2671467  T
Q  238 tggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||    
T  2671468 tggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 2671514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 13 - 284
Target Start/End: Complemental strand, 7167695 - 7167413
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct--ttttga 110  Q
    ||||||||||||| ||||||||||| || |||   | ||||| |||||||||| |||||||||||||||||||||||||||||||||||||   ||| |     
T  7167695 accttgggtcagacgcaaatcgtgacacgattt--gaaaatcatggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcagatttggg 7167598  T
Q  111 a---------gtagagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 200  Q
    |         | ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7167597 atagagcttggaagagcttagagagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 7167498  T
Q  201 -cattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
     |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  7167497 acattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 7167413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 48 - 284
Target Start/End: Original strand, 8738743 - 8738991
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt-gaagtagagctt----------agagagagaa-cttgg 135  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||          |||||||||| |||||    
T  8738743 ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttgaaggagagcttggaagagcttagagagagaaacttgg 8738842  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattg 235  Q
    ||  |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8738843 attgcaaaggagggaaccaatgggttgagtgtctttgtagagagtatctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatta 8738942  T
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||| |||||| ||||||||||||||| | |||||||| ||||||||||    
T  8738943 gttgaaaggatctaaagcttcctctagtgtcttctcttctagggttcat 8738991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 48 - 284
Target Start/End: Original strand, 9090981 - 9091229
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt-gaagtagagctt----------agagagagaa-cttgg 135  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||          |||||||||| |||||    
T  9090981 ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttgaaggagagcttggaagagcttagagagagaaacttgg 9091080  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattg 235  Q
    || ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9091081 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtatctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatta 9091180  T
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||| |||||| ||||||||||||||| | |||||||| ||||||||||    
T  9091181 gttgaaaggatctaaagcttcctctagtgtcttctcttctagggttcat 9091229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 48 - 284
Target Start/End: Original strand, 40372476 - 40372724
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctt-tttgaa----------gtagagcttagagagagaa-cttgg 135  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||   |||| |          | ||||||||||||||||| |||||    
T  40372476 ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcagatttgtaagagagcttggaagagcttagagagagaaacttgg 40372575  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattg 235  Q
    || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40372576 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatta 40372675  T
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  40372676 gttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 40372724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 114 - 284
Target Start/End: Complemental strand, 8477704 - 8477533
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8477704 agagcttagagagagaaacttggattacagaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 8477605  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  8477604 cttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 8477533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 22172996 - 22173100
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172996 gagcttagaaagagaacttggatagcaaagtagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 22173095  T
Q  215 tgggt 219  Q
    |||||    
T  22173096 tgggt 22173100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 114 - 284
Target Start/End: Complemental strand, 1306285 - 1306116
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| | ||||||||||||    | ||||||||||||||| | |||  ||||||||||||||||||||||||||| |||    
T  1306285 agagcttagagagagaaacttggattataaaggagggaactctagagttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacac 1306186  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| | ||||||||||| | | |||||||||||||||||||    
T  1306185 cttgggtagtga-gatttca-ccattggaaggatcttaagcttcctcttgtgtcttctcttttagggttcat 1306116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 22172900 - 22172962
Alignment:
Q  46 tgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22172900 tgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttt 22172962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 27352301 - 27352356
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 103  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27352301 ggaaatcgtggcacgattgcttcagaggaaggctaatatatattgtgttcttgtgc 27352356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 27986216 - 27986319
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| ||||||||||||||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  27986216 agagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 27986313  T
Q  220 agtgag 225  Q
    ||||||    
T  27986314 agtgag 27986319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 18656711 - 18656614
Alignment:
Q  121 agagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    ||||||| |||||||| | |||||  |||| || ||||| || ||| ||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  18656711 agagagaaaacttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 18656614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 284
Target Start/End: Complemental strand, 32143637 - 32143489
Alignment:
Q  132 ttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttc 231  Q
    |||||| ||||||||||||||    ||||||||||||||||| | ||   |||||||||||||  |||||||||||| ||||||||||||||| || |||    
T  32143637 ttggattacaaaggagggaactctagggttgagtgtctttgtagtgatgatctcttgggttgg--aaaacattgtaaacaccttgggtagtga-gatttc 32143541  T
Q  232 attggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |    ||||||||||  |||||||||||| | | |||||||||||||||||||    
T  32143540 a-ccattggaaggatcaaaagcttcctcttgtgtcttctcttttagggttcat 32143489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 225
Target Start/End: Original strand, 39032282 - 39032417
Alignment:
Q  92 gtgttcttgtgc--tttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 186  Q
    ||||||||||||  |||||||||||||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  |||||    
T  39032282 gtgttcttgtgcagtttttgaagtagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaga-tctct 39032380  T
Q  187 tgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    |||||||| |||  |||||||| ||||||||||||||||    
T  39032381 tgggttggtaaa--cattgtaaacaccttgggtagtgag 39032417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 284
Target Start/End: Original strand, 26928368 - 26928519
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggag 228  Q
    ||||||||| ||||| ||||||||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||| ||| ||     
T  26928368 aacttggattacaaacgagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtaatga-gat 26928464  T
Q  229 ttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||    ||||||||||  |||||||||||| | | |||||||||||||||||||    
T  26928465 ttca-ccattggaaggatcaaaagcttcctcttgtgtcttctcttttagggttcat 26928519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 284
Target Start/End: Original strand, 33386417 - 33386595
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    ||||| ||||||||||  |||||||||| ||||||| ||||||||| ||||    ||||||||||||||||| | |||  |||||||||||| ||||  |    
T  33386417 ttttggagtagagcttgaagagagagaaacttggattacaaaggagagaactttagggttgagtgtctttgtagtgaggatctcttgggttgagaaa--c 33386514  T
Q  202 attgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||| ||||||||||||||| || ||||    ||||||||||  |||||||||| | | | |||||||||||||||||||    
T  33386515 attgtaaacaccttgggtagtga-gatttca-ccattggaaggatcaaaagcttccttttgtgtcttctcttttagggttcat 33386595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 40592542 - 40592645
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  40592542 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 40592639  T
Q  220 agtgag 225  Q
    ||||||    
T  40592640 agtgag 40592645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 8370231 - 8370352
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||    
T  8370231 ttttgaagaagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaac 8370328  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| || |||||||||||||    
T  8370329 attgtaaacatcttgggtagtgag 8370352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 284
Target Start/End: Complemental strand, 27453359 - 27453126
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc--tttttgaagtagagctt--agagagagaa-cttggataacaa 142  Q
    ||||||||||||||||||   ||||  |||||||||| | ||  ||||||||||||  ||||||||| |||||||  |||||||||| ||||||| ||||    
T  27453359 ggaaatcgtggcacgattttatcagttgaagactagtttttaa-gtgttcttgtgcagtttttgaag-agagcttgaagagagagaaacttggattacaa 27453262  T
Q  143 aggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttggaa 242  Q
    ||||||||||    |||||||||||||  || | |||  ||||||||||||| |||  |||||||| ||||||||||||||| || ||||    ||||||    
T  27453261 aggagggaactttagggttgagtgtct--gtagtgaggatctcttgggttggcaaa--cattgtaaacaccttgggtagtga-gatttca-ccattggaa 27453168  T
Q  243 ggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||  |||||||||| | | | |||||||||||||||||||    
T  27453167 ggatcaaaagcttccttttgtgtcttctcttttagggttcat 27453126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 27974694 - 27974815
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  |||||||||| ||||||  |    
T  27974694 ttttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggtcgggaaa--c 27974791  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  27974792 attgtaaacaccttgggtagtgag 27974815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 47923646 - 47923767
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    || |||||||||||||| | |||  |||||||||||||||||  |    
T  47923646 ttttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttaggattgagtgtctttgtagtgagaatctcttgggttgggaaa--c 47923743  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  47923744 attgtaaacaccttgggtagtgag 47923767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 1736064 - 1736167
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||| |||||||||||||  |||||||| ||||||||||    
T  1736064 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgggaaa--cattgtaaacaccttgggt 1736161  T
Q  220 agtgag 225  Q
    ||||||    
T  1736162 agtgag 1736167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 21711548 - 21711445
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||| ||    
T  21711548 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgagt 21711451  T
Q  220 agtgag 225  Q
    ||||||    
T  21711450 agtgag 21711445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 4386774 - 4386840
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||||||||||| ||||||||    
T  4386774 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaatcaccttgagtagtgag 4386840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 16264666 - 16264572
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||    |||||||||||||||||   |||  |||||||||||||||||  |||||||| ||||||||||||||||    
T  16264666 aacttggattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 16264572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 24694908 - 24695029
Alignment:
Q  105 ttttgaagtagagctt--agagagagaactt-ggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| || |||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||    
T  24694908 ttttgaagaagagcttgaagagagagaaatttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaac 24695005  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| |||||||||| |||||    
T  24695006 attgtaaacaccttgggtggtgag 24695029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 36029382 - 36029316
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||||||||    
T  36029382 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagtgag 36029316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 6794473 - 6794578
Alignment:
Q  119 ttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||| ||||||| |||||||||| |||    |||||||||||| |||| | |||  ||||||| |||||||||  |||||||| ||||||||    
T  6794473 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtcattgtagtgaggttctcttgagttgggaaa--cattgtaaacaccttgg 6794570  T
Q  218 gtagtgag 225  Q
    ||||||||    
T  6794571 gtagtgag 6794578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 26299316 - 26299211
Alignment:
Q  119 ttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||| ||||||| | |||||||| |||    ||||||| ||||||||| | |||  |||||||||||||||||  |||||||| ||||||||    
T  26299316 ttagagagagaaacttggattataaaggaggtaactttagggttgaatgtctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgg 26299219  T
Q  218 gtagtgag 225  Q
    ||||||||    
T  26299218 gtagtgag 26299211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 24968484 - 24968426
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctt 105  Q
    ||||||||||||||||||| |||||| | ||||||||||| ||  ||||||||||||||    
T  24968484 gggaaatcgtggcacgatttcttcagggcaagactagtatttaaagtgttcttgtgctt 24968426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 2672639 - 2672700
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  2672639 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttt 2672700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 2676795 - 2676856
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  2676795 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttt 2676856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 3323488 - 3323554
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||| | | |||  |||||||||||||||||  |||||||| ||||||||||||||||    
T  3323488 gggttgagtgtctttatagtgaggttctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 3323554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 3328154 - 3328220
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||| | |||  |||||||||||||  |||||||||||| ||||||||||||||||    
T  3328154 gggttgaatgtctttgtagtgagcttctcttgggttgg--aaaacattgtaaacaccttgggtagtgag 3328220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 18656808 - 18656747
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  18656808 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttt 18656747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 8126917 - 8126853
Alignment:
Q  159 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||| | |||  | |||||||||||||||  |||||||| ||||||||||||||||    
T  8126917 gttgagtgtctttgtagtgaggttttcttgggttgggaaa--cattgtaaacaccttgggtagtgag 8126853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 23392166 - 23392106
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  23392166 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 23392106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 8477782 - 8477729
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 102  Q
    |||||||||| |||||||||||||||||||| ||||||| ||  |||||||||||    
T  8477782 ggaaatcgtgacacgattgcttcagaggaaggctagtattta-agtgttcttgtg 8477729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 27027050 - 27026929
Alignment:
Q  105 ttttgaagtagagcttagagagagaa---cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  ||||||||   ||||||| |||||||||| |||    |||||||||||||||||   |||  |||||||| | ||||||  |    
T  27027050 ttttgaagaagagcttgaagagagaaaaacttggattacaaaggaggtaactttagggttgagtgtctttgtactgaggatctcttggatagggaaa--c 27026953  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  27026952 attgtaaacaccttgggtagtgag 27026929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 37726001 - 37725898
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  |||||||||| |||  ||||||| ||| |||||||| |    
T  37726001 agagagagaaacttggattacaaaggaggaaactttagggttgagtgtctttgtagtgaggatctcttgggtgggg--aaacattataaacaccttggat 37725904  T
Q  220 agtgag 225  Q
    ||||||    
T  37725903 agtgag 37725898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 48438540 - 48438439
Alignment:
Q  120 tagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||| ||||||||| |||||||||| |||    ||||||||||||||||| |  ||  |||||||| ||||||||  |||||||| ||||||||||    
T  48438540 tagagaga-aacttggattacaaaggaggtaactttagggttgagtgtctttgtagtaaggatctcttgg-ttgggaaa--cattgtaaacaccttgggt 48438445  T
Q  220 agtgag 225  Q
    ||||||    
T  48438444 agtgag 48438439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 2672783 - 2672835
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  2672783 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 2672835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 2676939 - 2676991
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  2676939 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 2676991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 8512450 - 8512398
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  8512450 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 8512398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 8517330 - 8517278
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  8517330 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 8517278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 10274646 - 10274605
Alignment:
Q  184 tcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||| ||||| || |||||||||||||||||    
T  10274646 tcttgggttgggaaacacattatattcaccttgggtagtgag 10274605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 24968340 - 24968288
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  24968340 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 24968288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 35925767 - 35925701
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||| | |||  ||| |||||||||||||  |||||||| ||||||||||||||||    
T  35925767 gggttgaatgtctttgtagtgaggatcttttgggttgggaaa--cattgtaaacaccttgggtagtgag 35925701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 22172844 - 22172899
Alignment:
Q  9 gtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgatt 65  Q
    ||||||||||| || | |||||||||||| || ||| ||||||||||||||||||||    
T  22172844 gtcaaccttggttccgttgcaaatcgtgacacgatt-tgggaaatcgtggcacgatt 22172899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 23410586 - 23410529
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 216  Q
    ||||||||||||||||| | |||  |||||||||||||  |||||||||||| |||||||    
T  23410586 gggttgagtgtctttgtagtgaggttctcttgggttgg--aaaacattgtaaacaccttg 23410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 5e-96; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 12 - 284
Target Start/End: Original strand, 24787011 - 24787292
Alignment:
Q  12 aaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt-ga 110  Q
    |||||||||||||| ||||||||||| || ||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24787011 aaccttgggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttga 24787108  T
Q  111 agtagag----------cttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 200  Q
    || ||||          |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24787109 aggagagcttggaagagcttagagagagaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 24787208  T
Q  201 cattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  24787209 cattataatcaccttgggcagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 24787292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 114 - 284
Target Start/End: Original strand, 24202529 - 24202698
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24202529 agagcttagagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 24202628  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| ||  |||    |||||||||| ||||||||||||||| | |||||||||||||||||||    
T  24202629 cttgggtagtga-gatctca-ccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 24202698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 41398513 - 41398415
Alignment:
Q  122 gagagagaacttggataacaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41398513 gagagagaacttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 41398415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 41390858 - 41390760
Alignment:
Q  122 gagagagaacttggataacaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41390858 gagagagaacttggatagcaaaggagggaaccaaatggattgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 41390760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 114 - 284
Target Start/End: Original strand, 19366068 - 19366237
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||| ||||||| |||    
T  19366068 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacac 19366167  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| ||||||||||||| | | |||||||||||||||||||    
T  19366168 cttgggtagtga-gatttca-ccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 19366237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 114 - 284
Target Start/End: Original strand, 19358604 - 19358772
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||||||| | |||  ||| |||||||||||||| |||||||| |||    
T  19358604 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatcttttgggttgggaaaa-cattgtaaacac 19358702  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| ||||||||||||| | | |||||||||||||||||||    
T  19358703 cttgggtagtga-gatttca-ccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 19358772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 114 - 284
Target Start/End: Original strand, 19361193 - 19361361
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||| ||| ||||||||||||||    ||||||||||||||||| | |||  |||||||||||||| |||||||||||| |||    
T  19361193 agagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg-aaaacattgtaaacac 19361291  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| ||||||||||||| | | |||||||||||||||||||    
T  19361292 cttgggtagtga-gatttca-ccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 19361361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 24793833 - 24793921
Alignment:
Q  12 aaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 102  Q
    |||||||||||||| ||||||||||| || ||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24793833 aaccttgggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 24793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 25439619 - 25439801
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttttgaag----------tagagctt-agagagagaacttgg 135  Q
    ||||||||||||||||||| |||||| ||| ||||||||| |||||||||||||||||||||||||           ||||||| ||||||| | |||||    
T  25439619 gggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgctttttgaagacaaccttaagagagcttaagagagaaatcttgg 25439718  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    | | |||||  |||| || ||||| || ||| ||||| |||||| || |||| ||||||||||||||||||||||||||||||    
T  25439719 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 25439801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 25444812 - 25444994
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttttgaag----------tagagctt-agagagagaacttgg 135  Q
    ||||||||||||||||||| |||||| ||| ||||||||| |||||||||||||||||||||||||           ||||||| ||||||| | |||||    
T  25444812 gggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgctttttgaagacaaccttaagagagcttaagagagaaatcttgg 25444911  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    | | |||||  |||| || ||||| || ||| ||||| |||||| || |||| ||||||||||||||||||||||||||||||    
T  25444912 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 25444994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 41391004 - 41390895
Alignment:
Q  9 gtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct-ttt 107  Q
    |||||||| ||||| | |||| ||||||| || ||   ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||    
T  41391004 gtcaacctggggtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttt 41390905  T
Q  108 tgaagtagag 117  Q
    ||||||||||    
T  41390904 tgaagtagag 41390895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 41398659 - 41398550
Alignment:
Q  9 gtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct-ttt 107  Q
    |||||||| ||||| | |||| ||||||| || ||   ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||    
T  41398659 gtcaacctggggtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttt 41398560  T
Q  108 tgaagtagag 117  Q
    ||||||||||    
T  41398559 tgaagtagag 41398550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 44023597 - 44023779
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttttga----------agtagagctt-agagagagaacttgg 135  Q
    ||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||||||          |  ||||||| ||||||| | |||||    
T  44023597 gggaaatcgtggcacgatttcttcaggggaggactggtatatattgtgttcttgtgctttttgaggataaccttaagagagcttaagagagaaatcttgg 44023696  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    | | |||||  |||| || ||||| || ||| ||||| |||||| || |||| ||||||||||||||||||||||||||||||    
T  44023697 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 44023779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 1054734 - 1054917
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc-tttttgaag----------tagagctt-agagagagaacttg 134  Q
    ||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||| |||||||||           ||||||| ||||||| | ||||    
T  1054734 gggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaagagagaaatcttg 1054833  T
Q  135 gataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    || | |||||  |||| || ||||| || ||| ||||| |||||| || |||| ||||||||||||||||||||||||||||||    
T  1054834 gagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 1054917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 39445862 - 39445679
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct-ttttgaag----------tagagctt-agagagagaacttg 134  Q
    ||||||||||||||||||| |||||| | | ||||||||||||||||||||||||||| ||||||||           ||||||| ||||||| | ||||    
T  39445862 gggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaagagagaaatcttg 39445763  T
Q  135 gataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    || | |||||  |||| || ||||| || ||| ||||| |||||| || |||| ||||||||||||||||||||||||||||||    
T  39445762 gagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 39445679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 47098594 - 47098699
Alignment:
Q  119 ttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  47098594 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagcgaggttctcttgggttggg--aaacattgtaaacaccttgg 47098691  T
Q  218 gtagtgag 225  Q
    ||||||||    
T  47098692 gtagtgag 47098699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 47102608 - 47102713
Alignment:
Q  119 ttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  47102608 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgg 47102705  T
Q  218 gtagtgag 225  Q
    ||||||||    
T  47102706 gtagtgag 47102713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 13604393 - 13604496
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| ||||||||||||||    ||||||||| ||||||| | |||  |||||||||||||||||  |||||||| ||||||||||    
T  13604393 agagagagaaacttggattacaaaggagggaactttagggttgagtatctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgggt 13604490  T
Q  220 agtgag 225  Q
    ||||||    
T  13604491 agtgag 13604496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 29652130 - 29652036
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||    ||||||||||||||||| | |||  ||| |||||||||||||  |||||||| ||||||||||||||||    
T  29652130 aacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttgggaaa--cattgtaaacaccttgggtagtgag 29652036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 3281995 - 3281930
Alignment:
Q  158 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    |||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||||||||    
T  3281995 ggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagtgag 3281930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 9476590 - 9476485
Alignment:
Q  119 ttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||| ||||||| |||||||||| |||   |||||||| ||||||||| | |||  |||||| ||||||||||  |||||||| || |||||    
T  9476590 ttagagagagaaacttggattacaaaggaggtaacttttgggttgaatgtctttgtagtgaggttctctttggttgggaaa--cattgtaaacatcttgg 9476493  T
Q  218 gtagtgag 225  Q
    ||||||||    
T  9476492 gtagtgag 9476485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 27104171 - 27104275
Alignment:
Q  119 ttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||| ||||||| |||||||||| |||     |||||||||||||||| | ||| ||||||||||||||||||  |||| ||| ||||||||    
T  27104171 ttagagagagaaacttggattacaaaggaggtaactttaaggttgagtgtctttgtagtgag-gtctcttgggttgggaaa--cattataagcaccttgg 27104267  T
Q  218 gtagtgag 225  Q
    ||||||||    
T  27104268 gtagtgag 27104275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 19379916 - 19380001
Alignment:
Q  197 aaaacattgtaatcaccttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| |||||||||||||||| | ||||    |||||||||| ||||||||||||| | | |||||||||||||||||||    
T  19379916 aaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 19380001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 21536350 - 21536441
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 222  Q
    ||||||||| |||||||||| |||    ||||||||||||||||| | |||  |||||| ||||||  |||||||||||| |||||||||||||    
T  21536350 aacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttaggttgg--aaaacattgtaaacaccttgggtagt 21536441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 13598744 - 13598623
Alignment:
Q  105 ttttgaagtagagctt--agagagagaac-ttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  ||||||||||  |||||| |||||||||| |||     |||||||||||||||| | |||  ||||||||||||| |||  |    
T  13598744 ttttgaaggagagcttgaagagagagaaaattggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggcaaa--c 13598647  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  13598646 attgtaaacaccttgggtagtgag 13598623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 20622597 - 20622544
Alignment:
Q  50 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 103  Q
    |||||||| ||| |||||||||||||||| ||||||||||  ||||||||||||    
T  20622597 aaatcgtgacacaattgcttcagaggaaggctagtatataaagtgttcttgtgc 20622544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 32889782 - 32889661
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    ||||||||||||| ||  |||||||||| |||||||  ||||||||| |||    ||||||||||||||||| | |||  | | |||||||||||||  |    
T  32889782 ttttgaagtagagattttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggtttttttgggttgggaaa--c 32889685  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  32889684 attgtaaacaccttgggtagtgag 32889661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 37070111 - 37069998
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||||||||||   |||||||||| ||||||| |||||||||| |||     |||||||||||||||| | |||  ||||||||||||||  ||||    
T  37070111 ttttgaagtagagctggaagagagagaaacttggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggg--aaac 37070014  T
Q  202 attgtaatcaccttgg 217  Q
    ||||||| ||||||||    
T  37070013 attgtaaacaccttgg 37069998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 43988314 - 43988366
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  43988314 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 43988366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 16124347 - 16124388
Alignment:
Q  182 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  16124347 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 16124388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 22819714 - 22819657
Alignment:
Q  163 agtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 222  Q
    ||||||||||| | |||  |||||||||||||||||  |||||||| |||||||||||||    
T  22819714 agtgtctttgtagtgaggttctcttgggttgggaaa--cattgtaaacaccttgggtagt 22819657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 40816622 - 40816690
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  40816622 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 40816690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 47703741 - 47703809
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  47703741 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 47703809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 6e-77; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 48 - 284
Target Start/End: Complemental strand, 24742357 - 24742109
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctt-tttgaagtagagctt----------agagagagaa-cttgg 135  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||   |||| || |||||||          |||||||||| |||||    
T  24742357 ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcagatttgtaggagagcttggaagagcttagagagagaaacttgg 24742258  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattg 235  Q
    || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24742257 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatta 24742158  T
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  24742157 gttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 24742109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 29761055 - 29760820
Alignment:
Q  50 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc---tttttgaagt-------agagcttagagagagaa-cttggata 138  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||   |||  | ||        ||| ||||||| ||||| |||||||     
T  29761055 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcagatttggggagagcttggaagaacttagagtgagaaacttggatt 29760956  T
Q  139 acaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa-cattgtaatcaccttgggtagtgaggagttcattggt 237  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  29760955 acaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaaacattgtaatcaccttgggtagtgaggagttcattagt 29760856  T
Q  238 tggaaggatttaaagcttcctctagggacttctctt 273  Q
    ||||||||| ||||||||||||||| | ||||||||    
T  29760855 tggaaggatctaaagcttcctctagtgtcttctctt 29760820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 9228867 - 9229099
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    |||| |||||||||| | |||| ||||||| || ||   ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9228867 tgtctaccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgctttt 9228966  T
Q  108 t-gaagta--------------------gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 186  Q
    | |||||                     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9228967 ttgaagtgaatcttaagagagcttgtatgagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 9229066  T
Q  187 tgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||| || |||||||||||||||||||||||    
T  9229067 tgggtttgggaaaacattgtaatcaccttgggt 9229099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 51520741 - 51520637
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520741 gagcttagagagagaacttggatagaaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 51520642  T
Q  215 tgggt 219  Q
    |||||    
T  51520641 tgggt 51520637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 9224080 - 9224312
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    |||| |||||||||| | |||| ||||||| || ||   ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||    
T  9224080 tgtctaccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttctgctttt 9224179  T
Q  108 t-gaagta--------------------gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 186  Q
    | |||||                     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9224180 ttgaagtgaatcttaagagagcttgtatgagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 9224279  T
Q  187 tgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||| || |||||||||||||||||||||||    
T  9224280 tgggtttgggaaaacattgtaatcaccttgggt 9224312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 18712566 - 18712671
Alignment:
Q  114 agagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacc 213  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18712566 agagcttttagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgttatcacc 18712665  T
Q  214 ttgggt 219  Q
    ||||||    
T  18712666 ttgggt 18712671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 219
Target Start/End: Complemental strand, 3814386 - 3814202
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt----ga-------agtagagctta-gagagagaacttg 134  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||    ||       || |||||||| |||||| ||||||    
T  3814386 gggaaatcgtgacacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagacaaccttaggagagcttaagagagaaaacttg 3814287  T
Q  135 gataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    || | ||||||||||| || ||||| || ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||    
T  3814286 gacatcaaaggagggatcctatggggtgtgtgtctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggt 3814202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 56141698 - 56141793
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||||||||| || ||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  56141698 accttgggtcagatgcaaatcgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttt 56141793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 5733026 - 5732844
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttttgaag----------tagagctt-agagagagaacttgg 135  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||| |||||||||           ||||||| ||||||| |||||||    
T  5733026 gggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtgttttttgaagacaaccttaagagagcttaagagagaaaacttgg 5732927  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    | | |||||  |||| || ||||| || ||| ||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  5732926 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 5732844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 284
Target Start/End: Original strand, 28468298 - 28468467
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||||||||||||||    ||||| ||||||||||| | |||  ||||||||||||||||||| ||||||| |||    
T  28468298 agagcttagagagagaaacttggattacaaaggagggaactctagggttaagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacac 28468397  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| ||||||||||||| | | |||||||||||||||||||    
T  28468398 cttgggtagtga-gatttca-ccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 28468467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 51520864 - 51520770
Alignment:
Q  13 accttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||| ||||||||||| || ||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  51520864 accttgggtcagacgcaaatcgtgacacgatt-tgggaaatcgtggcacaattgcttcagaggaaggctagtatatattgtgttcttgtgcttttt 51520770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 45347537 - 45347721
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc-tttttgaag----------tagagctt-agagagagaa-ctt 133  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||| |||||||||           ||||||| ||||||| || |||    
T  45347537 gggaaatcgtggcacgatttcttcaggggaaaactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaagagagaaaatctt 45347636  T
Q  134 ggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    ||| | |||||  |||| || ||||| || ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  45347637 ggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtctcttaggttgggaaaaacattgtaatcaccttggg 45347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 18712436 - 18712536
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    ||||||||||||||| | || | ||||||| |||||   || |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18712436 tgtcaaccttgggtccgttgaagatcgtgacacaatctaggaaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgctttt 18712535  T
Q  108 t 108  Q
    |    
T  18712536 t 18712536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 18856089 - 18855906
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct-ttttgaag----------tagagctt-agagagagaacttg 134  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||           ||||||| ||||||| | ||||    
T  18856089 gggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaagagagaaatcttg 18855990  T
Q  135 gataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    || | |||||  |||| || ||||| ||  || ||||| |||||| || |||| ||||||||||||||||||||||||||||||    
T  18855989 gagatcaaagaggggagcctatggggtgtttgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 18855906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 45357018 - 45357201
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc-tttttgaag----------tagagctt-agagagagaacttg 134  Q
    ||||||||||| ||||||| |||| | ||| |||||||||||||||||||||||||| |||||||||           ||||||| ||||||| | ||||    
T  45357018 gggaaatcgtgacacgatttcttctggggaggactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaagagagaaatcttg 45357117  T
Q  135 gataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    || | |||||  |||| || ||||| || ||| ||||| |||||| || |||| ||||||||||||||||||||||||||||||    
T  45357118 gagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 45357201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 31985329 - 31985506
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct--ttttgaagtagagctt--agagagagaa-cttggataacaa 142  Q
    ||||||||||||||||||   ||||  |||||||||||| ||  ||||||||||||   ||||||||| ||||||  |||||||||| ||||||| ||||    
T  31985329 ggaaatcgtggcacgattttatcagttgaagactagtatttaa-gtgttcttgtgcagattttgaagt-gagcttgaagagagagaaacttggattacaa 31985426  T
Q  143 aggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtga 224  Q
    ||||||||||    ||||||||||| |||||   |||  |||||||||||||||||  |||||||| |||||||||||||||    
T  31985427 aggagggaactttagggttgagtgtttttgtattgaggatctcttgggttgggaaa--cattgtaaacaccttgggtagtga 31985506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 3777875 - 3777772
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  3777875 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 3777778  T
Q  220 agtgag 225  Q
    ||||||    
T  3777777 agtgag 3777772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 16623064 - 16623167
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  16623064 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 16623161  T
Q  220 agtgag 225  Q
    ||||||    
T  16623162 agtgag 16623167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 5268953 - 5269074
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||    
T  5268953 ttttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaac 5269050  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| |||||||| |||||||    
T  5269051 attgtaaacaccttggatagtgag 5269074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 6743168 - 6743289
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    ||||||||||||||||  |||||||||| ||||||| |||||||||| |||    || |||||||||||||| | |||  ||||||||||||||  ||||    
T  6743168 ttttgaagtagagcttgaagagagagaaacttggattacaaaggaggtaacttgaggtttgagtgtctttgtagcgaggatctcttgggttggg--aaac 6743265  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||| ||||    
T  6743266 attgtaaacaccttgggtaatgag 6743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 10047725 - 10047604
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    |||||||||||||||||   |||  |||||||||||||||||  |    
T  10047725 ttttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttgggaaa--c 10047628  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  10047627 attgtaaacaccttgggtagtgag 10047604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 5112523 - 5112460
Alignment:
Q  160 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    |||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||||||||    
T  5112523 ttgagtgtctttgttgtgaggttctcttgggttggg--aaacattgtaaacaccttgggtagtgag 5112460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 5396442 - 5396545
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| ||||||||||  ||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  5396442 agagagagaaacttggattacaaaggaggttactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 5396539  T
Q  220 agtgag 225  Q
    ||||||    
T  5396540 agtgag 5396545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 36314983 - 36315104
Alignment:
Q  105 ttttgaagtagagcttagagagaga---acttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||   |||||||| |||||||||| |||    ||||| ||||||||||| |||||  ||||||||||||||  ||||    
T  36314983 ttttgaaggagagcttgaagagagataaacttggattacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttggg--aaac 36315080  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||| ||||||||||||    
T  36315081 attgtaaacacattgggtagtgag 36315104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 36329192 - 36329313
Alignment:
Q  105 ttttgaagtagagcttagagagaga---acttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||   |||||||| |||||||||| |||    ||||| ||||||||||| |||||  ||||||||||||||  ||||    
T  36329192 ttttgaaggagagcttgaagagagataaacttggattacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttggg--aaac 36329289  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||| ||||||||||||    
T  36329290 attgtaaacacattgggtagtgag 36329313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 16628680 - 16628746
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||||||||    
T  16628680 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagtgag 16628746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 25861786 - 25861907
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||| ||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||    
T  25861786 ttttgaaggagagcttttagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaac 25861883  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||| ||||||||    
T  25861884 attgtaaacaccttgagtagtgag 25861907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 8689276 - 8689370
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||    ||||| ||||||||||| | |||  ||||||||||||||  ||||||| ||| |||||||| |||||||    
T  8689276 aacttggattacaaaggaggtaactttagggtttagtgtctttgtagtgaggatctcttgggttggg--aaacattttaaacaccttggatagtgag 8689370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 42599355 - 42599448
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||   | |||||||||||||||| | |||  |||||| |||||||  ||||||| ||| ||||||||||||||||    
T  42599355 aacttggattacaaaggaggtaactt-taggttgagtgtctttgtagtgaggttctcttcggttggg--aaacattctaaacaccttgggtagtgag 42599448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 38152246 - 38152311
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtga 224  Q
    ||||||||||||||||| | |||  ||||||||| ||||  ||| ||||||| |||||||||||||||    
T  38152246 gggttgagtgtctttgtagtgaggatctcttgggatggg--aaatattgtaaacaccttgggtagtga 38152311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 6e-77; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 48 - 284
Target Start/End: Original strand, 11098607 - 11098855
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc----tttttgaagt-------agagcttagagagagaa-cttgg 135  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    || | ||||        ||||||||||||||||| |||||    
T  11098607 ggaaatcgtggcacgatttcttcagaggaagactagcatatattgtgttcttgtgcagatttgtagaagagcttggaagagcttagagagagaaacttgg 11098706  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattg 235  Q
    || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  11098707 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagtacatta 11098806  T
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  11098807 gttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 11098855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 48 - 284
Target Start/End: Complemental strand, 14291905 - 14291657
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc---tttttgaa--------gtagagcttagagagagaa-cttgg 135  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||   |||| ||         | ||||||||||||||||| |||||    
T  14291905 ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcagattttagagagagcttggaagagcttagagagagaaacttgg 14291806  T
Q  136 ataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattg 235  Q
    || ||||||||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14291805 attacaaaggagggaaccaaagggttgagcgtctttgtagatagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatta 14291706  T
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  14291705 gttggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 14291657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 50 - 284
Target Start/End: Original strand, 9296084 - 9296329
Alignment:
Q  50 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt-------gaagt----agagcttagagagagaa-cttggat 137  Q
    |||||||| |||||||||||||||||||||||||||| ||  |||||||||||||||||       ||  |    |||||||||||||| || |||||||    
T  9296084 aaatcgtgacacgattgcttcagaggaagactagtatttaaagtgttcttgtgcttttttggaggagagcttggaagagcttagagagaaaaacttggat 9296183  T
Q  138 aacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggt 237  Q
     ||||||||||||||||| ||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    |    
T  9296184 tacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctattgggttgggaaaaacattgtaatcaccttgggtagtgaggagttca-ccat 9296282  T
Q  238 tggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||    
T  9296283 tggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 9296329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 39811799 - 39811894
Alignment:
Q  125 agagaacttggataacaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  39811799 agagaacttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttgagaaaaacattgtaatcaccttgggt 39811894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 284
Target Start/End: Complemental strand, 3492154 - 3491918
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct--ttttgaagtagagcttagagagagaa-cttggataacaaag 144  Q
    |||||||||| ||| |||   |||| ||||||||||||| ||  ||||||||||||   ||||| |||| ||||||||||||||| ||||||| ||||||    
T  3492154 ggaaatcgtgacacaattttatcagtggaagactagtatttaa-gtgttcttgtgcagattttggagtaaagcttagagagagaaacttggattacaaag 3492056  T
Q  145 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattggttggaagg 244  Q
    |||||||     ||||||||||||||||| | |||  ||||||||||||| ||||||||||||| ||||||||||||||||   |||     ||||||||    
T  3492055 gagggaaatctagggttgagtgtctttgtagtgaggatctcttgggttggaaaaaacattgtaaacaccttgggtagtgag--attccaccattggaagg 3491958  T
Q  245 atttaaagcttcctctagggacttctcttttagggttcat 284  Q
    || | ||||||||||| | | |||||||||||||||||||    
T  3491957 atcttaagcttcctcttgtgtcttctcttttagggttcat 3491918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 25409966 - 25409854
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||| ||||||||||    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| |||    
T  25409966 agagcttagagagagaaacttggattacagaggagggaacactagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacac 25409867  T
Q  213 cttgggtagtgag 225  Q
    |||||||||||||    
T  25409866 cttgggtagtgag 25409854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 39811697 - 39811758
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39811697 gggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttt 39811758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 32247153 - 32246968
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc---tttttgaag----------tagagctt-agagagagaact 132  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||   |||||||||           ||| ||| ||||||| ||||    
T  32247153 gggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtgcctttttttgaagataaccttaagagaacttaagagagaaaact 32247054  T
Q  133 tggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    |||| | |||||  |||  || ||||| || ||| ||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  32247053 tggagatcaaagagggggtcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 32246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 17865548 - 17865428
Alignment:
Q  105 ttttgaagtagagctt--agagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaca 202  Q
    |||||||| |||||||  ||||| ||||||||||| |||||||||| |||    ||||||||||||||||| | ||   |||||||||||||||||  ||    
T  17865548 ttttgaagaagagcttgaagagacagaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaagatctcttgggttgggaaa--ca 17865451  T
Q  203 ttgtaatcaccttgggtagtgag 225  Q
    |||||| ||||||||||||||||    
T  17865450 ttgtaaacaccttgggtagtgag 17865428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 14698762 - 14698883
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||| |||||||||||  |    
T  14698762 ttttgaaggagagcttttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctctcgggttgggaaa--c 14698859  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  14698860 attgtaaacaccttgggtagtgag 14698883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 23078251 - 23078345
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||   ||||||||||||||||||   |||  ||||||||||||||  ||||||||||| ||||||||||||||||    
T  23078251 aacttggattacaaaggaggtaacttttgggttgagtgtctttgtgatgagaatctcttgggttggg--aaacattgtaaacaccttgggtagtgag 23078345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 33118479 - 33118358
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  |||||||||||||| ||  |    
T  33118479 ttttgaagaagagcttttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggggaa--c 33118382  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  33118381 attgtaaacaccttgggtagtgag 33118358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 33528377 - 33528498
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||    
T  33528377 ttttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaac 33528474  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||| ||||||||||||    
T  33528475 attgtaaacacattgggtagtgag 33528498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 40739151 - 40739057
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| ||||||||||||||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||| ||||    
T  40739151 aacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtaatgag 40739057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 21630262 - 21630168
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||    | ||||||||||||||| | |||  |||||||||||||||||  |||||||| ||||||||||||||||    
T  21630262 aacttggattacaaaggaggtaactttagtgttgagtgtctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 21630168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 28258930 - 28259051
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||||| | | |||  ||||||||||||||  ||||    
T  28258930 ttttgaagaagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttggg--aaac 28259027  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| || |||||||||||||    
T  28259028 attgtaaacatcttgggtagtgag 28259051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 34389168 - 34389074
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||    |||||| |||||||||| | |||  |||||||||||||||||  |||||||| ||||||||||||||||    
T  34389168 aacttggattacaaaggaggtaactttagggttgtgtgtctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 34389074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 36757570 - 36757636
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||||||||    
T  36757570 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagtgag 36757636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 39483222 - 39483156
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||||| |||  ||||||||||||||  ||| ||||||| ||||||||||||||||    
T  39483222 gggttgagtgtctttgttgtgaggatctcttgggttggg--aaatattgtaaacaccttgggtagtgag 39483156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 20522548 - 20522445
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||| ||| |||||||||| |||    ||||||||||||||||| | |||| ||||||||||||||  || |||||||| || |||||||    
T  20522548 agagagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgagtatctcttgggttggg--aagcattgtaaacaacttgggt 20522451  T
Q  220 agtgag 225  Q
    ||||||    
T  20522450 agtgag 20522445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 41586358 - 41586425
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaca-ttgtaatcaccttgggtagtgag 225  Q
    |||||||||||||||| ||||||  |||||||||||||  |||||| |||||| ||||||||||||||||    
T  41586358 gggttgagtgtctttggtgagagcttctcttgggttgg--aaaacagttgtaaacaccttgggtagtgag 41586425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 19344789 - 19344728
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  19344789 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttt 19344728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 19349647 - 19349586
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  19349647 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttt 19349586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 10445236 - 10445341
Alignment:
Q  119 ttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 217  Q
    |||||||||||| ||| ||| |||||||||| |||    ||||||| ||||||||| | |||  ||||| |||||||||||  |||||||| ||||||||    
T  10445236 ttagagagagaaacttagattacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctctcgggttgggaaa--cattgtaaacaccttgg 10445333  T
Q  218 gtagtgag 225  Q
    ||||||||    
T  10445334 gtagtgag 10445341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 25398711 - 25398663
Alignment:
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||| ||||||||||||| | | |||||||||||||||||||    
T  25398711 gttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 25398663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 25403849 - 25403801
Alignment:
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||| ||||||||||||| | | |||||||||||||||||||    
T  25403849 gttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 25403801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 25407838 - 25407790
Alignment:
Q  236 gttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||| ||||||||||||| | | |||||||||||||||||||    
T  25407838 gttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 25407790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 2869501 - 2869566
Alignment:
Q  158 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    |||||||||||||||| | |||  ||||||| |||||  |||||||||||| ||| ||||||||||||    
T  2869501 ggttgagtgtctttgtagtgaggttctcttgagttgg--aaaacattgtaaacacattgggtagtgag 2869566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 29867780 - 29867840
Alignment:
Q  156 tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    ||||||||| ||||||| | ||||| |||||||||||||||||  |||||||| ||||||||||    
T  29867780 tgggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttgggt 29867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 31056334 - 31056266
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  31056334 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 31056266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 5e-59; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 114 - 284
Target Start/End: Original strand, 5674527 - 5674697
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    |||||||||||||| || ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5674527 agagcttagagagataaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 5674626  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||||||||||||||||||    |||||||||| ||||||||||||||| | |||||||||||||||||||    
T  5674627 cttgggtagtgaggagttca-ccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcat 5674697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 22010370 - 22010602
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    |||| |||||||||| | |||||||||||| || ||   ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  22010370 tgtctaccttgggtccgttgcaaatcgtgacacgatctagggaaatcgtggcacgatttcttcagagggagactagtatatattgtgttcttgtgctttt 22010469  T
Q  108 t----gaagta-----------------gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 186  Q
    |    |||| |                 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22010470 ttgaagaagaacttaagagagcttgtatgagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 22010569  T
Q  187 tgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||||||||||||||||||||||||||    
T  22010570 tgggttgggaaaaacattgtaatcaccttgggt 22010602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 11857258 - 11857154
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857258 gagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 11857159  T
Q  215 tgggt 219  Q
    |||||    
T  11857158 tgggt 11857154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 14737378 - 14737482
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737378 gagctttgagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 14737477  T
Q  215 tgggt 219  Q
    |||||    
T  14737478 tgggt 14737482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 14742238 - 14742342
Alignment:
Q  115 gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcacct 214  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14742238 gagctttgagagagaacttggataacaaaggagggaaccaatgggttaagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcactt 14742337  T
Q  215 tgggt 219  Q
    |||||    
T  14742338 tgggt 14742342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 11857386 - 11857287
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    ||||||||||||||| | |||||||||||| || ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11857386 tgtcaaccttgggtccgttgcaaatcgtgacacgatt-tgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgctttt 11857288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 14737247 - 14737347
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    ||||||||||||||| | |||| ||||||| || ||   ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  14737247 tgtcaaccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgctttt 14737346  T
Q  108 t 108  Q
    |    
T  14737347 t 14737347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 14742107 - 14742207
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    ||||||||||||||| | |||| ||||||| || ||    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  14742107 tgtcaaccttgggtccgttgcagatcgtgacacgatctaaggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgctttt 14742206  T
Q  108 t 108  Q
    |    
T  14742207 t 14742207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 28155291 - 28155475
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc-tttttga-----------agtagagctt-agagagagaactt 133  Q
    ||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||| |||||||           |  ||| ||| ||||||| |||||    
T  28155291 gggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttgaaaaaaaaccttaagagaacttaagagagaaaactt 28155390  T
Q  134 ggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    ||| | |||||  |||| || ||||| || ||| ||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  28155391 ggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 28155475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 6438863 - 6438680
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct-ttttgaag----------tagagctt-agagagagaacttg 134  Q
    ||||||||||| ||||||| |||||| | | ||||||||||||||||||||||||||| ||||||||           ||||||| ||||||| | ||||    
T  6438863 gggaaatcgtgacacgatttcttcagggaaggactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaagagagaaatcttg 6438764  T
Q  135 gataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    || | |||||  |||| || ||||| || ||| ||||| |||||| || |||| ||||||||||||||||||||||||||||||    
T  6438763 gagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 6438680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 284
Target Start/End: Complemental strand, 22709327 - 22709176
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggag 228  Q
    ||||||||| ||||||||||||||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| |||||||| |||||| ||     
T  22709327 aacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttggatagtga-gat 22709231  T
Q  229 ttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||    ||||||||||  ||| |||||||| | | |||||||||||||||||||    
T  22709230 ttca-ccattggaaggatcaaaaacttcctcttgtgtcttctcttttagggttcat 22709176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 5266469 - 5266418
Alignment:
Q  50 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgt 101  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  5266469 aaatcgtgacacgattgcttcagaggaagactagtatattttgtgttcttgt 5266418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 28184757 - 28184684
Alignment:
Q  149 gaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggg---aaaaacattgtaatcaccttgggt 219  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| ||   |||||||| |||||||||||||||    
T  28184757 gaacaaatgggttgagggtctttgttgagagtgtctcttgggtttgggaaaaaaacatagtaatcaccttgggt 28184684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 31936919 - 31936798
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    ||||||||||||| ||  |||||||||| |||||||  ||||||||| |||    ||||||||||||||||| | |||  ||| |||||||||||||  |    
T  31936919 ttttgaagtagaggttttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgggaaa--c 31936822  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  31936821 attgtaaacaccttgggtagtgag 31936798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 225
Target Start/End: Original strand, 5571996 - 5572117
Alignment:
Q  104 tttttgaagtagagctt-agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    ||||||||| ||||||| |||||||||| ||||||| |||| ||||| |||    |||||| |||||||||| | | |  |||||||||||||||||  |    
T  5571996 tttttgaaggagagctttagagagagaaacttggattacaatggaggtaactttagggttgggtgtctttgtagtggggatctcttgggttgggaaa--c 5572093  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  5572094 attgtaaacaccttgggtagtgag 5572117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 16839148 - 16839049
Alignment:
Q  9 gtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    |||||||||||| | | |||| ||||||| || ||   ||||||||||| ||||||| |||||| | | ||||||||||||  |||||||||||||||||    
T  16839148 gtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttttt 16839049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 5757249 - 5757352
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    |||||||||||||||||    ||  |||||||||||||||||  |||||||| ||||||||||    
T  5757249 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtatttaggatctcttgggttgggaaa--cattgtaaacaccttgggt 5757346  T
Q  220 agtgag 225  Q
    ||||||    
T  5757347 agtgag 5757352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 5017304 - 5017370
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||| ||||    
T  5017304 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtaatgag 5017370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 6005786 - 6005725
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  6005786 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttt 6005725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 33330153 - 33330214
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||||||||    
T  33330153 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttt 33330214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 5343844 - 5343787
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct 104  Q
    ||||||||||||||||||| |||||| |   ||||||||||||  |||||||||||||    
T  5343844 gggaaatcgtggcacgatttcttcagggctggactagtatataaagtgttcttgtgct 5343787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 6005650 - 6005598
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  6005650 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 6005598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 16838977 - 16838925
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  16838977 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 16838925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 22963988 - 22963922
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | ||   |||||||| ||||||||  |||||||| ||||||||||||||||    
T  22963988 gggttgagtgtctttgtagtgaagatctcttggattgggaaa--cattgtaaacaccttgggtagtgag 22963922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 23824405 - 23824471
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | ||   |||||||| ||||||||  |||||||| ||||||||||||||||    
T  23824405 gggttgagtgtctttgtagtgaagatctcttggattgggaaa--cattgtaaacaccttgggtagtgag 23824471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 24435780 - 24435845
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  ||||||| |||||||||  |||||||| ||||||||||||||||    
T  24435780 gggttgagtgtctttgt-gtgaggttctcttgagttgggaaa--cattgtaaacaccttgggtagtgag 24435845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 31979801 - 31979735
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  ||| |||||||| ||||  |||||||| ||||||||||||||||    
T  31979801 gggttgagtgtctttgtagtgaggttcttttgggttgagaaa--cattgtaaacaccttgggtagtgag 31979735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 33330297 - 33330349
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  33330297 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 33330349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 33335650 - 33335711
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    ||||||||||||||||||| |||||| | | ||||||||| ||  |||||| ||||||||||    
T  33335650 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcatgtgcttttt 33335711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 33335794 - 33335846
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  33335794 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 33335846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 5343757 - 5343658
Alignment:
Q  121 agagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 218  Q
    ||||||| |||||||||| |||||  |||| ||  |||| || ||  ||||| ||||||||  |||| |||||||||||  |||||||||||||||||||    
T  5343757 agagagaaaacttggatatcaaagatgggatcctttggggtgtgttcctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcaccttggg 5343658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 6136359 - 6136288
Alignment:
Q  14 ccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtat 86  Q
    ||||||| | || ||||||||||| ||||||| || |||||||| ||||||||   |||||||||||||||||    
T  6136359 ccttgggacggaagcaaatcgtgacacaattg-ggaaaatcgtgacacgattggaacagaggaagactagtat 6136288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 21801150 - 21801218
Alignment:
Q  157 gggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  21801150 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 21801218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 34735 - 34967
Alignment:
Q  8 tgtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctttt 107  Q
    |||| |||||||||| | |||| ||||||| || ||   ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||    
T  34735 tgtctaccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcactatttcttcagaggaagactagtatatattgtgttcttttgctttt 34834  T
Q  108 t-gaagta--------------------gagcttagagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 186  Q
    | |||||                     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34835 ttgaagtgaatcttaagagagcttgtatgagcttagagagagaacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 34934  T
Q  187 tgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||| || |||||||||||||||||||||||    
T  34935 tgggtttgggaaaacattgtaatcaccttgggt 34967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 114 - 284
Target Start/End: Original strand, 17712 - 17881
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||||||| |||||  |||||||||||||||||||||||||||||||    
T  17712 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcac 17811  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| ||||||||||||| | | |||||||||||||||||||    
T  17812 cttgggtagtga-gatttca-ccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 17881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 114 - 284
Target Start/End: Original strand, 23805 - 23974
Alignment:
Q  114 agagcttagagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 212  Q
    ||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||||||| |||||  |||||||||||||||||||||||||||||||    
T  23805 agagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcac 23904  T
Q  213 cttgggtagtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    |||||||||||| || ||||    |||||||||| ||||||||||||| | | |||||||||||||||||||    
T  23905 cttgggtagtga-gatttca-ccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcat 23974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 3657 - 3754
Alignment:
Q  123 agagagaacttggataacaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  3657 agagagaacttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttaggaaaaacattgtaatcaccttgggt 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 3560 - 3618
Alignment:
Q  50 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    |||||||| ||||||| |||||| |||||||||||||||||||| ||||||||||||||    
T  3560 aaatcgtgacacgatttcttcaggggaagactagtatatattgtattcttgtgcttttt 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 9514 - 9549
Alignment:
Q  184 tcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||| |||||||||||||||||||||||||||||||    
T  9514 tcttaggttgggaaaaacattgtaatcaccttgggt 9549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 284
Target Start/End: Original strand, 8188 - 8348
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| ||||||||||||||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  8188 agagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 8285  T
Q  220 agtgaggagttcattggttggaaggatttaaagcttcctctagggacttctcttttagggttcat 284  Q
    ||||| || ||||    ||||||||||| |||||||||| | | | |||||||||||||||||||    
T  8286 agtga-gatttca-ccattggaaggattaaaagcttccttttgtgtcttctcttttagggttcat 8348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 725 - 542
Alignment:
Q  47 gggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgct-ttttgaag----------tagagctt-agagagagaacttg 134  Q
    ||||||||||| ||||||| |||||| ||| |||| |||||||||||||||||||||| ||||||||           ||||||| ||||||| | ||||    
T  725 gggaaatcgtgacacgatttcttcaggggaggactggtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaagagagaaatcttg 626  T
Q  135 gataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 218  Q
    || | |||||  |||| || ||||| || ||| ||||| |||||| || |||| ||||||||||||||||||||||||||||||    
T  625 gagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 36585 - 36706
Alignment:
Q  105 ttttgaagtagagctt--agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  |||||||||||||  |||||    
T  36585 ttttgaaggagagcttgaagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--aaaac 36682  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  36683 attgtaaacaccttgggtagtgag 36706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 43732 - 43835
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| |||||||||| |||    ||||||||||||||||| | |||  ||| |||||||||||||  |||||||| ||||||||||    
T  43732 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttgggaaa--cattgtaaacaccttgggt 43829  T
Q  220 agtgag 225  Q
    ||||||    
T  43830 agtgag 43835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 133050 - 133153
Alignment:
Q  121 agagagagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 219  Q
    |||||||||| ||||||| ||||||||||||||    ||||||||| ||||||| | |||  |||||||||||||||||  |||||||| ||||||||||    
T  133050 agagagagaaacttggattacaaaggagggaactttagggttgagtttctttgtagtgaggatctcttgggttgggaaa--cattgtaaacaccttgggt 133147  T
Q  220 agtgag 225  Q
    ||||||    
T  133148 agtgag 133153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 6029 - 5908
Alignment:
Q  105 ttttgaagtagagctt--agagagagaac-ttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaac 201  Q
    |||||||| |||||||  ||||||||||  |||||| |||||||||| |||     |||||||||||||||| | |||  ||||||||||||| |||  |    
T  6029 ttttgaaggagagcttgaagagagagaaaattggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggcaaa--c 5932  T
Q  202 attgtaatcaccttgggtagtgag 225  Q
    ||||||| ||||||||||||||||    
T  5931 attgtaaacaccttgggtagtgag 5908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 2837 - 2717
Alignment:
Q  105 ttttgaagtagagctt--agagagagaacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaca 202  Q
    |||||||| |||||||  |||||||||| |||||| |||||  ||| |||    ||||| ||| ||||||| | |||  |||||||||||||||||  ||    
T  2837 ttttgaaggagagcttgaagagagagaaattggattacaaaaaaggtaactttagggttaagtttctttgtagtgaggatctcttgggttgggaaa--ca 2740  T
Q  203 ttgtaatcaccttgggtagtgag 225  Q
    |||||| ||||||| ||||||||    
T  2739 ttgtaaacaccttgcgtagtgag 2717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 86000 - 85906
Alignment:
Q  129 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 225  Q
    ||||||||| |||||||||| |||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||| ||||||||||||    
T  86000 aacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacactttgggtagtgag 85906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 1921 - 2017
Alignment:
Q  9 gtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctt 105  Q
    |||||||||||| | | |||| ||||||| || ||   ||||||||||| ||||||| |||||| | | ||||||||||||  ||||||||||||||    
T  1921 gtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgctt 2017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 2103 - 2155
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  2103 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 2155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 148626 - 148722
Alignment:
Q  9 gtcaaccttgggtcagatgcaaatcgtgaaacaattgtgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctt 105  Q
    |||||||||||| | | |||| ||||||| || ||   ||||||||||| ||||||| |||||| | | ||||||||||||  ||||||||||||||    
T  148626 gtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgctt 148722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 148808 - 148860
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  148808 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 148860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 14161 - 14213
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  14161 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 14213  T

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Target: scaffold0197; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 18885 - 18945
Alignment:
Q  48 ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 108  Q
    |||||||||||||||||| |||||| | | ||||| ||| ||  |||||||||||||||||    
T  18885 ggaaatcgtggcacgatttcttcagggcaggactaatatttaaagtgttcttgtgcttttt 18945  T

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Target: scaffold0197; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 19017 - 19068
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttgg 217  Q
    ||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  19017 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgg 19068  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 176829 - 176881
Alignment:
Q  168 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 218  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  176829 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 176881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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