View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6876A_low_175 (Length: 269)

Name: NF6876A_low_175
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6876A_low_175
NF6876A_low_175
[»] chr4 (40 HSPs)
chr4 (1-184)||(9223911-9224094)
chr4 (1-184)||(9228698-9228881)
chr4 (1-156)||(18712295-18712450)
chr4 (17-184)||(51520871-51521038)
chr4 (17-184)||(24742398-24742565)
chr4 (1-184)||(56141523-56141707)
chr4 (7-201)||(3814417-3814609)
chr4 (7-184)||(5733057-5733235)
chr4 (17-197)||(31495722-31495902)
chr4 (7-184)||(18856120-18856297)
chr4 (7-184)||(45347329-45347506)
chr4 (32-197)||(13992714-13992879)
chr4 (17-189)||(7122274-7122446)
chr4 (17-189)||(7124496-7124668)
chr4 (17-197)||(8392982-8393161)
chr4 (17-134)||(29761079-29761196)
chr4 (17-197)||(28467977-28468157)
chr4 (17-197)||(8395191-8395370)
chr4 (16-198)||(5135648-5135830)
chr4 (16-197)||(5137875-5138056)
chr4 (198-269)||(44882122-44882193)
chr4 (7-88)||(45356906-45356987)
chr4 (120-198)||(31985126-31985204)
chr4 (121-184)||(18860446-18860509)
chr4 (139-200)||(29761182-29761242)
chr4 (213-269)||(44864243-44864299)
chr4 (120-198)||(5148225-5148303)
chr4 (137-197)||(5143807-5143867)
chr4 (136-184)||(8689049-8689097)
chr4 (217-269)||(44849988-44850040)
chr4 (139-184)||(16628358-16628403)
chr4 (139-184)||(38151923-38151968)
chr4 (140-184)||(3778116-3778160)
chr4 (138-184)||(5268704-5268750)
chr4 (139-184)||(6742901-6742946)
chr4 (139-184)||(10047932-10047977)
chr4 (139-180)||(16622783-16622824)
chr4 (139-184)||(36314716-36314761)
chr4 (139-184)||(36328925-36328970)
chr4 (139-184)||(54867745-54867790)
[»] chr7 (45 HSPs)
chr7 (1-184)||(12406662-12406845)
chr7 (1-184)||(4873526-4873709)
chr7 (7-184)||(24023831-24024008)
chr7 (1-184)||(20357040-20357224)
chr7 (17-184)||(21640244-21640411)
chr7 (17-184)||(2058426-2058592)
chr7 (17-197)||(24789426-24789606)
chr7 (3-184)||(31109082-31109264)
chr7 (1-184)||(12397310-12397480)
chr7 (17-197)||(43504541-43504721)
chr7 (17-197)||(18414095-18414275)
chr7 (17-197)||(20343500-20343679)
chr7 (17-197)||(39730933-39731113)
chr7 (32-198)||(48408397-48408563)
chr7 (17-197)||(6592742-6592921)
chr7 (20-197)||(21646466-21646643)
chr7 (7-190)||(21811745-21811928)
chr7 (17-198)||(6594958-6595138)
chr7 (17-198)||(32060709-32060889)
chr7 (17-197)||(18409219-18409399)
chr7 (119-201)||(1562510-1562591)
chr7 (17-197)||(18392601-18392780)
chr7 (32-200)||(25767381-25767543)
chr7 (17-153)||(1532947-1533083)
chr7 (17-184)||(24265689-24265856)
chr7 (7-184)||(16880471-16880648)
chr7 (7-184)||(16885326-16885503)
chr7 (123-197)||(1532884-1532958)
chr7 (52-197)||(2479815-2479960)
chr7 (17-184)||(24260833-24261000)
chr7 (120-197)||(47264190-47264267)
chr7 (120-199)||(44847617-44847696)
chr7 (120-197)||(21983790-21983867)
chr7 (120-198)||(21989454-21989532)
chr7 (140-197)||(18390506-18390562)
chr7 (17-88)||(1562408-1562479)
chr7 (139-184)||(79955-80000)
chr7 (120-154)||(4509335-4509369)
chr7 (120-154)||(4511177-4511211)
chr7 (120-154)||(6431467-6431501)
chr7 (120-154)||(14070348-14070382)
chr7 (120-154)||(14380376-14380410)
chr7 (17-67)||(18389165-18389215)
chr7 (138-183)||(49092237-49092282)
chr7 (52-108)||(4178440-4178496)
[»] chr6 (45 HSPs)
chr6 (1-184)||(11857372-11857555)
chr6 (1-184)||(14741938-14742121)
chr6 (1-184)||(22010201-22010384)
chr6 (29-184)||(30125030-30125185)
chr6 (1-134)||(14737128-14737261)
chr6 (17-198)||(16578922-16579102)
chr6 (17-198)||(16616278-16616458)
chr6 (29-197)||(27647467-27647635)
chr6 (7-184)||(6438894-6439071)
chr6 (17-197)||(3073163-3073343)
chr6 (17-199)||(411683-411866)
chr6 (17-199)||(5674227-5674409)
chr6 (32-197)||(2171939-2172104)
chr6 (17-197)||(16554454-16554633)
chr6 (17-197)||(16631010-16631189)
chr6 (17-197)||(22709465-22709645)
chr6 (17-134)||(5266493-5266610)
chr6 (17-199)||(6136368-6136549)
chr6 (3-197)||(16839137-16839331)
chr6 (17-197)||(25420797-25420976)
chr6 (7-197)||(33329932-33330122)
chr6 (16-197)||(6026834-6027014)
chr6 (81-199)||(6097870-6097988)
chr6 (17-197)||(33342508-33342688)
chr6 (17-189)||(34166673-34166846)
chr6 (7-197)||(33335429-33335619)
chr6 (17-189)||(13150856-13151029)
chr6 (17-201)||(34164440-34164624)
chr6 (7-198)||(6005817-6006008)
chr6 (17-184)||(5343885-5344052)
chr6 (120-197)||(26253589-26253666)
chr6 (7-88)||(28155179-28155260)
chr6 (119-201)||(34151824-34151905)
chr6 (120-197)||(23896880-23896957)
chr6 (139-197)||(16652716-16652773)
chr6 (139-184)||(5266596-5266641)
chr6 (139-184)||(14737097-14737142)
chr6 (141-184)||(28155102-28155145)
chr6 (32-198)||(5756950-5757116)
chr6 (139-184)||(5016981-5017026)
chr6 (139-184)||(31085958-31086003)
chr6 (139-190)||(5571755-5571806)
chr6 (17-67)||(25421020-25421070)
chr6 (17-134)||(16652759-16652876)
chr6 (144-184)||(21272474-21272514)
[»] chr8 (31 HSPs)
chr8 (1-184)||(6311740-6311923)
chr8 (1-184)||(25327676-25327859)
chr8 (1-184)||(18852639-18852823)
chr8 (17-184)||(10683751-10683918)
chr8 (1-184)||(18870033-18870217)
chr8 (1-184)||(30656086-30656270)
chr8 (17-184)||(33037299-33037466)
chr8 (17-184)||(36979835-36980002)
chr8 (4-184)||(7289439-7289620)
chr8 (17-184)||(4759546-4759713)
chr8 (1-134)||(10688661-10688794)
chr8 (7-184)||(39784337-39784514)
chr8 (18-197)||(2627318-2627497)
chr8 (17-197)||(1261414-1261594)
chr8 (17-197)||(3439088-3439266)
chr8 (17-200)||(26288337-26288520)
chr8 (17-200)||(26301594-26301777)
chr8 (17-200)||(26313588-26313771)
chr8 (17-197)||(42575729-42575909)
chr8 (81-197)||(31042908-31043024)
chr8 (32-197)||(7412787-7412952)
chr8 (17-197)||(15290143-15290323)
chr8 (17-197)||(15470512-15470692)
chr8 (7-197)||(35745789-35745979)
chr8 (139-200)||(25689558-25689618)
chr8 (17-134)||(25689604-25689720)
chr8 (139-184)||(10688630-10688675)
chr8 (139-184)||(5701964-5702009)
chr8 (139-189)||(4456575-4456625)
chr8 (120-154)||(11383406-11383440)
chr8 (139-183)||(23799105-23799149)
[»] chr5 (49 HSPs)
chr5 (1-184)||(1456650-1456833)
chr5 (1-184)||(27450214-27450397)
chr5 (1-184)||(27445371-27445554)
chr5 (18-184)||(29402562-29402728)
chr5 (1-184)||(43599122-43599306)
chr5 (1-184)||(43604614-43604798)
chr5 (1-184)||(43610106-43610290)
chr5 (1-184)||(30631753-30631936)
chr5 (1-184)||(15045085-15045267)
chr5 (17-197)||(18442053-18442233)
chr5 (17-197)||(9789629-9789809)
chr5 (17-197)||(26177466-26177646)
chr5 (17-197)||(29719965-29720146)
chr5 (1-134)||(43592677-43592811)
chr5 (17-198)||(22536673-22536853)
chr5 (17-198)||(24136304-24136485)
chr5 (1-134)||(31180654-31180787)
chr5 (18-197)||(29722152-29722332)
chr5 (16-197)||(16407641-16407822)
chr5 (17-197)||(10592844-10593022)
chr5 (74-197)||(29752267-29752390)
chr5 (17-189)||(25077713-25077885)
chr5 (17-189)||(25135682-25135854)
chr5 (17-197)||(16409077-16409257)
chr5 (17-197)||(26170357-26170537)
chr5 (17-199)||(40379676-40379857)
chr5 (7-184)||(28807088-28807265)
chr5 (17-190)||(37560953-37561126)
chr5 (7-197)||(2785773-2785963)
chr5 (7-197)||(33768582-33768772)
chr5 (7-197)||(33791714-33791904)
chr5 (17-190)||(37556131-37556304)
chr5 (17-197)||(16546216-16546395)
chr5 (17-197)||(40381889-40382068)
chr5 (81-197)||(29751608-29751724)
chr5 (32-197)||(9352807-9352972)
chr5 (17-197)||(16543994-16544173)
chr5 (81-197)||(15465009-15465125)
chr5 (7-198)||(31396488-31396679)
chr5 (7-197)||(31401346-31401536)
chr5 (120-197)||(36931843-36931920)
chr5 (147-197)||(35388196-35388246)
chr5 (139-184)||(31180773-31180818)
chr5 (139-184)||(43592797-43592842)
chr5 (139-198)||(14520796-14520855)
chr5 (17-113)||(38219850-38219946)
chr5 (17-67)||(29751565-29751615)
chr5 (139-189)||(11916452-11916502)
chr5 (139-180)||(12083667-12083708)
[»] chr3 (66 HSPs)
chr3 (1-184)||(28501164-28501347)
chr3 (1-184)||(28503331-28503514)
chr3 (1-184)||(7167686-7167870)
chr3 (4-184)||(22172674-22172854)
chr3 (17-184)||(40372268-40372435)
chr3 (17-184)||(8477823-8477990)
chr3 (17-180)||(27352097-27352260)
chr3 (7-184)||(18656839-18657017)
chr3 (17-150)||(2671111-2671244)
chr3 (17-197)||(54634710-54634889)
chr3 (18-197)||(800685-800864)
chr3 (32-197)||(1306439-1306604)
chr3 (17-198)||(6716084-6716264)
chr3 (17-134)||(8738585-8738702)
chr3 (17-134)||(9090823-9090940)
chr3 (32-199)||(26928078-26928245)
chr3 (17-197)||(4598927-4599107)
chr3 (17-197)||(4601148-4601328)
chr3 (17-198)||(25637012-25637192)
chr3 (7-199)||(2672416-2672608)
chr3 (32-197)||(23198365-23198530)
chr3 (32-197)||(23200564-23200729)
chr3 (29-197)||(3617034-3617201)
chr3 (32-197)||(33386137-33386302)
chr3 (17-189)||(10055812-10055985)
chr3 (17-189)||(10058034-10058207)
chr3 (17-189)||(10060256-10060429)
chr3 (17-189)||(10062478-10062651)
chr3 (17-189)||(10064700-10064873)
chr3 (17-189)||(10066922-10067095)
chr3 (7-190)||(2676581-2676764)
chr3 (81-197)||(7782596-7782712)
chr3 (17-184)||(8512648-8512815)
chr3 (17-197)||(10208778-10208958)
chr3 (17-197)||(10210978-10211158)
chr3 (17-184)||(8517528-8517695)
chr3 (17-184)||(32475892-32476059)
chr3 (17-184)||(32480750-32480917)
chr3 (52-198)||(37726154-37726300)
chr3 (7-184)||(24968515-24968692)
chr3 (52-197)||(37408036-37408180)
chr3 (32-197)||(27453416-27453581)
chr3 (139-199)||(45282583-45282642)
chr3 (139-197)||(6718288-6718345)
chr3 (137-197)||(32143868-32143928)
chr3 (17-134)||(6718331-6718448)
chr3 (137-197)||(27974433-27974493)
chr3 (32-113)||(32143782-32143863)
chr3 (137-197)||(27985957-27986017)
chr3 (120-184)||(36029640-36029704)
chr3 (139-187)||(40734084-40734132)
chr3 (138-197)||(40845220-40845279)
chr3 (139-184)||(16264896-16264941)
chr3 (139-184)||(21711768-21711813)
chr3 (139-184)||(27027273-27027318)
chr3 (139-184)||(30709271-30709316)
chr3 (17-134)||(45282628-45282745)
chr3 (145-184)||(8738554-8738593)
chr3 (145-184)||(9090792-9090831)
chr3 (119-198)||(27038588-27038667)
chr3 (139-197)||(39032017-39032075)
chr3 (139-187)||(40735015-40735063)
chr3 (146-184)||(1730921-1730959)
chr3 (139-184)||(35926057-35926101)
chr3 (139-184)||(40592257-40592302)
chr3 (139-180)||(48438782-48438823)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-184)||(34566-34749)
[»] scaffold0355 (1 HSPs)
scaffold0355 (7-184)||(3349-3526)
[»] chr2 (28 HSPs)
chr2 (3-184)||(39811489-39811670)
chr2 (17-184)||(11098399-11098566)
chr2 (17-184)||(14291946-14292113)
chr2 (1-184)||(9295874-9296058)
chr2 (32-198)||(3492212-3492378)
chr2 (17-198)||(4484743-4484924)
chr2 (18-198)||(25410087-25410267)
chr2 (32-197)||(30832921-30833086)
chr2 (17-198)||(12647788-12647968)
chr2 (17-197)||(32289148-32289328)
chr2 (18-197)||(6266274-6266453)
chr2 (32-197)||(40739292-40739457)
chr2 (109-184)||(44310483-44310558)
chr2 (7-197)||(19344820-19345010)
chr2 (7-183)||(19349678-19349854)
chr2 (120-201)||(32247276-32247356)
chr2 (7-67)||(32247184-32247244)
chr2 (137-198)||(28258668-28258729)
chr2 (139-184)||(8389636-8389681)
chr2 (137-184)||(36757430-36757477)
chr2 (139-201)||(33528093-33528155)
chr2 (139-184)||(10706738-10706783)
chr2 (139-184)||(21630511-21630556)
chr2 (139-184)||(39483443-39483488)
chr2 (143-199)||(33118696-33118752)
chr2 (145-184)||(20522794-20522833)
chr2 (139-184)||(23077957-23078002)
chr2 (32-113)||(28258734-28258815)
[»] chr1 (31 HSPs)
chr1 (1-189)||(41390991-41391178)
chr1 (7-184)||(39445893-39446070)
chr1 (17-197)||(20622641-20622821)
chr1 (7-184)||(1054526-1054703)
chr1 (7-184)||(44023389-44023566)
chr1 (34-197)||(19365768-19365931)
chr1 (1-134)||(24793709-24793843)
chr1 (7-184)||(25439411-25439588)
chr1 (17-198)||(44203217-44203397)
chr1 (17-199)||(51764988-51765170)
chr1 (32-197)||(9986785-9986950)
chr1 (32-197)||(19360912-19361077)
chr1 (17-197)||(40281958-40282139)
chr1 (17-197)||(9036003-9036182)
chr1 (7-184)||(25444604-25444781)
chr1 (17-197)||(21053540-21053720)
chr1 (1-113)||(24786908-24787021)
chr1 (1-134)||(41398646-41398778)
chr1 (81-197)||(24202251-24202367)
chr1 (120-197)||(13604095-13604172)
chr1 (17-198)||(43987947-43988128)
chr1 (120-190)||(21536119-21536189)
chr1 (139-184)||(24793678-24793723)
chr1 (139-201)||(3282273-3282335)
chr1 (139-189)||(41398764-41398814)
chr1 (139-184)||(13598967-13599012)
chr1 (120-180)||(26644390-26644450)
chr1 (139-183)||(37070334-37070378)
chr1 (139-180)||(16124197-16124238)
chr1 (119-151)||(1192296-1192328)
chr1 (52-108)||(20762337-20762393)
[»] scaffold0286 (1 HSPs)
scaffold0286 (17-197)||(21939-22119)
[»] scaffold0665 (2 HSPs)
scaffold0665 (1-134)||(8097-8230)
scaffold0665 (139-184)||(8216-8261)
[»] scaffold0188 (1 HSPs)
scaffold0188 (18-198)||(17430-17610)
[»] scaffold0491 (2 HSPs)
scaffold0491 (17-201)||(11574-11757)
scaffold0491 (17-197)||(9129-9308)
[»] scaffold0464 (1 HSPs)
scaffold0464 (4-184)||(753-933)
[»] scaffold0674 (1 HSPs)
scaffold0674 (17-197)||(4131-4310)
[»] scaffold0565 (1 HSPs)
scaffold0565 (17-197)||(3006-3185)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-184)||(176462-176645)
[»] scaffold0259 (1 HSPs)
scaffold0259 (3-184)||(1751-1932)
[»] scaffold0197 (2 HSPs)
scaffold0197 (17-184)||(13796-13963)
scaffold0197 (21-197)||(18663-18839)
[»] scaffold0028 (1 HSPs)
scaffold0028 (3-184)||(148456-148637)
[»] scaffold0137 (1 HSPs)
scaffold0137 (17-197)||(5859-6039)
[»] scaffold0140 (1 HSPs)
scaffold0140 (120-197)||(7911-7988)
[»] scaffold1519 (1 HSPs)
scaffold1519 (32-156)||(523-647)
[»] scaffold0006 (3 HSPs)
scaffold0006 (120-197)||(132752-132829)
scaffold0006 (139-184)||(6252-6297)
scaffold0006 (139-184)||(3060-3105)
[»] scaffold1455 (1 HSPs)
scaffold1455 (121-184)||(1721-1784)
[»] scaffold0510 (1 HSPs)
scaffold0510 (120-197)||(1083-1160)
[»] scaffold0087 (2 HSPs)
scaffold0087 (32-190)||(43441-43599)
scaffold0087 (137-199)||(36322-36384)
[»] scaffold0098 (1 HSPs)
scaffold0098 (137-198)||(45744-45805)
[»] scaffold0466 (1 HSPs)
scaffold0466 (120-154)||(6750-6784)


Alignment Details
Target: chr4 (Bit Score: 164; Significance: 1e-87; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 9224094 - 9223911
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  9224094 gacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 9223995  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9223994 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9223911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 9228881 - 9228698
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  9228881 gacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 9228782  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9228781 acgagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9228698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 18712450 - 18712295
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  18712450 gacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 18712351  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18712350 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 18712295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 51520871 - 51521038
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |    
T  51520871 gtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccc 51520970  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  51520971 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 51521038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 24742398 - 24742565
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  |    
T  24742398 gtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 24742497  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24742498 tcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24742565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 56141707 - 56141523
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgattt-ggcgtcctgaa 99  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |    
T  56141707 gacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgca 56141608  T
Q  100 aactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||| || ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  56141607 aactagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 56141523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 3814417 - 3814609
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagc 106  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | |||||||||||||| || ||||| ||    
T  3814417 aggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa-atcgtgacacgatttggcgtcttgcaaacttgc 3814515  T
Q  107 tcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 201  Q
    | |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||    
T  3814516 ttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag-ccaatatcaacaataa 3814609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 5733057 - 5733235
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagc 106  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||    
T  5733057 aggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgc 5733156  T
Q  107 -tcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     |||||||  |  ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  5733157 ttcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaag 5733235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 31495722 - 31495902
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||| | |||||||||||  |||| |||| ||||||||||  |    
T  31495722 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 31495821  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31495822 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 31495902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 18856120 - 18856297
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| || ||| | |||| | |    
T  18856120 aggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttgg 18856219  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||| ||| |  |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18856220 ctcacgg-cacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 18856297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 45347506 - 45347329
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  45347506 aggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttgg 45347407  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||| ||  |  |||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  45347406 ctcacgg-catctctaatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaag 45347329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 13992714 - 13992879
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   ||||||||||||||||||||| |||| | |||||||||||  |||| |||| |||||||| |  |  |||||||||||||    
T  13992714 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacgaaatcgtgtcac 13992813  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  13992814 gatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 7122446 - 7122274
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||||    |||| || | |||||||||||      
T  7122446 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggcat 7122347  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
    |  |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7122346 cc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7122274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 7124668 - 7124496
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||||    |||| || | |||||||||||      
T  7124668 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggcat 7124569  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
    |  |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7124568 cc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7124496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 8393161 - 8392982
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||||| || | |||| |||||||||||    |||| || | |||||||||||      
T  8393161 gtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcat 8393062  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8393061 cc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 29761079 - 29761196
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  |    
T  29761079 gtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 29761178  T
Q  117 ttgaaatcgtgtcacgat 134  Q
    | ||||||||||||||||    
T  29761179 tcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 28468157 - 28467977
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   |||||||||||||||| ||||||||| | |||||||||||  |||| |||| ||||||||||  |    
T  28468157 gtccttatcatagaaacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 28468058  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
       ||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  28468057 acaaaatcgtgttacgatgccaaattcgtgtcacgatttctctgttcttccataccacaaatttgaagccaaatctcaaca 28467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 8395370 - 8395191
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| || |||||||||||| || | |||| || ||||||||    |||| || | |||||||||||      
T  8395370 gtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttgcacccctgcaaccctagctcacggcat 8395271  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8395270 cc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 5135830 - 5135648
Alignment:
Q  16 ggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggc 113  Q
    |||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||    
T  5135830 ggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggc 5135731  T
Q  114 cacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
      |  ||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  5135730 atcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagac-aatctcaacaa 5135648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 5138056 - 5137875
Alignment:
Q  16 ggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggc 113  Q
    |||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||    
T  5138056 ggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggc 5137957  T
Q  114 cacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |  ||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  5137956 atcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagac-aatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 44882193 - 44882122
Alignment:
Q  198 ataaatgataccaatactcctcactgaggtggcacatttattcaatacacataaagctcacctcttggatga 269  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44882193 ataaatgataccactactcctcactgaggtggcacatttattcaatacacataaagctcacctcttggatga 44882122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 45356987 - 45356906
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgattt 88  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45356987 aggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 45356906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 31985204 - 31985126
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| |||| ||||||||||||| |||||||||||||    
T  31985204 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagatcacaaatttgaagccaaatctcaacaa 31985126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 18860446 - 18860509
Alignment:
Q  121 aatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18860446 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 18860509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 29761182 - 29761242
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  29761182 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag-caaatatcaacaata 29761242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 44864299 - 44864243
Alignment:
Q  213 actcctcactgaggtggcacatttattcaatacacataaagctcacctcttggatga 269  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  44864299 actcctcactcaggtaacacatttattcaatacacataaagctcacctcttggatga 44864243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 5148225 - 5148303
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    ||||||||||||| ||  ||||||||||||||||||| || |||||||| ||||||||||||||| ||| | |||||||    
T  5148225 aaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaattttcaacaa 5148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 5143807 - 5143867
Alignment:
Q  137 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||| | ||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 5143867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 8689097 - 8689049
Alignment:
Q  136 ccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 8689049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 44850040 - 44849988
Alignment:
Q  217 ctcactgaggtggcacatttattcaatacacataaagctcacctcttggatga 269  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||||||||||    
T  44850040 ctcaccgaggtgatacatttattcaatacacataaagctcacctcttggatga 44849988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 16628403 - 16628358
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 16628358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 38151968 - 38151923
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 38151923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 3778116 - 3778160
Alignment:
Q  140 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 3778160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 5268750 - 5268704
Alignment:
Q  138 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaag 5268704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 6742946 - 6742901
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaag 6742901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 10047932 - 10047977
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaag 10047977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 16622824 - 16622783
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattt 16622783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 36314761 - 36314716
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| || |||||| | |||||||||||||||    
T  36314761 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36314716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 36328970 - 36328925
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| || |||||| | |||||||||||||||    
T  36328970 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 54867745 - 54867790
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||| ||| || |||||||| |||||||||||||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaag 54867790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 12406662 - 12406845
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||    
T  12406662 gacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaa 12406761  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12406762 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 12406845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 4873526 - 4873709
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||  |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||    
T  4873526 gacccaaggaagacaagtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 4873625  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4873626 actatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4873709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 24024008 - 24023831
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagc 106  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  24024008 aggttgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagc 24023909  T
Q  107 tcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    || | |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  24023908 tctctgccacttgaaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24023831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 20357224 - 20357040
Alignment:
Q  1 gacccaaggtt-gacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaa 99  Q
    ||||||||||| ||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |    
T  20357224 gacccaaggtttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgca 20357125  T
Q  100 aactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20357124 aactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 20357040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 21640244 - 21640411
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||  |    
T  21640244 gtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacc 21640343  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21640344 tcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 21640411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 2058426 - 2058592
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||    
T  2058426 gtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgg-cac 2058524  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2058525 ctcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 2058592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 24789606 - 24789426
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||||||  |    
T  24789606 gtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaactagctcacggcacc 24789507  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24789506 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 24789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 31109264 - 31109082
Alignment:
Q  3 cccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac 102  Q
    |||||||  |||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  31109264 cccaaggcagacaagtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac 31109165  T
Q  103 -tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     ||||| || | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  31109164 ttagcttacaggcacttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 31109082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 12397310 - 12397480
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||   ||| ||    
T  12397310 gacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatca----------tggc---ctgcaa 12397396  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12397397 actagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaag 12397480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 43504541 - 43504721
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   |||||||||||||||||||| ||||| | |||||||||||  |||| |||| ||||||||||  |    
T  43504541 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 43504640  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  43504641 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagctaaatctcaaca 43504721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 18414095 - 18414275
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || ||||||| |||||||||  ||||||||| ||||||||||||||||| | |||||||||||| |||| |||| ||||||||||  |    
T  18414095 gtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacggcacc 18414194  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
       |||||||| |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  18414195 acaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 18414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 20343679 - 20343500
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||| | |||||||| || ||| | || ||||||||||||  |    
T  20343679 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggcaacctagctcacggcacc 20343580  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20343579 ccgaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 39731113 - 39730933
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||| | |||||||| | |||||||||||  |||| |||| ||||||||||  |    
T  39731113 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 39731014  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
       ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  39731013 acaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 39730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 48408563 - 48408397
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   ||||||||||||||||| |||||||| | |||||||||||  |||| |||| ||||||||||  |   ||||||||||||    
T  48408563 acttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 48408464  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    ||||||||| ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  48408463 gatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaacaa 48408397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 6592742 - 6592921
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||||| || | |||| |||||||||||    |||| || | |||||||||||      
T  6592742 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcat 6592841  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6592842 cc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 21646466 - 21646643
Alignment:
Q  20 cttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttg 119  Q
    |||||||  ||||||||||||||||||||   |||||||||||||||| ||||||||| | |||||||||||  |||| |||| ||||||||||  |  |    
T  21646466 cttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacg 21646565  T
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  21646566 aaatcgtgtcacgatgccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatgtcaaca 21646643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 7 - 190
Target Start/End: Complemental strand, 21811928 - 21811745
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||| ||  |||| |||| | |    
T  21811928 aggttgaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattg 21811829  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 190  Q
    ||||||| ||  | | |||||||||||||| |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  21811828 ctcacgg-catctcagatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 21811745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 6594958 - 6595138
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||||| || | |||| |||||||||||    |||| || | |||||||||||      
T  6594958 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcat 6595057  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    |  |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  6595058 cc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagac-aatctcaacaa 6595138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 32060709 - 32060889
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| || | |||| |||||||||||    |||| || | |||||||||||      
T  32060709 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcat 32060808  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    |  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32060809 cc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 32060889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 18409219 - 18409399
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || ||||||| |||||||||  |||||||||||||||||| |||||||| | || ||||||||  |||| |||| ||||||||||  |    
T  18409219 gtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacggcacc 18409318  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
       ||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  18409319 acaaaatcgtgtcacgatgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaaatctcaaca 18409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 1562510 - 1562591
Alignment:
Q  119 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 201  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1562510 gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaataa 1562591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 18392601 - 18392780
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| | ||||| || ||  |||| || | ||||||||||| |    
T  18392601 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggc-a 18392699  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    | |  |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  18392700 cctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 25767381 - 25767543
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   ||||||||||||||||||||| |||| | |||||||||||  |||| |||| ||||||||||  |  |||||||||||||    
T  25767381 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 25767480  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 200  Q
    ||||||||| | |||||||||||||       ||||||||||||||||||||| ||||| |||||||||    
T  25767481 gatgccaaatttgtgtcacgatttc------tttccagaccacaaatttgaagccaaatatcaacaata 25767543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 1533083 - 1532947
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  ||||||||||||| |||||||  |||||||||||||||||||||||||| | |||||||||||  |||| ||||||||||| |||  |    
T  1533083 gtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcacc 1532984  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgat 153  Q
    |  ||||| ||||||||||||||| ||||||||||||    
T  1532983 tcaaaatcatgtcacgatgccaaattcgtgtcacgat 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 24265856 - 24265689
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc- 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| |||||||| |||     
T  24265856 gtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcct 24265757  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | ||  ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  24265756 ccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 24265689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 16880471 - 16880648
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaacta-g 105  Q
    ||||||||  ||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||||||| | |||||||| || ||| | |||||| |    
T  16880471 aggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactagg 16880570  T
Q  106 ctcacggcc-acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||| |||  | ||  |||||||||||||| |||||||||| ||||||| | ||| ||||||| ||||| |||||||||    
T  16880571 ctcactgcctccctg--atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 16885326 - 16885503
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaacta-g 105  Q
    ||||||||  ||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||||||| | |||||||| || ||| | |||||| |    
T  16885326 aggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactagg 16885425  T
Q  106 ctcacggcc-acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||| |||  | ||  |||||||||||||| |||||||||| ||||||| | ||| ||||||| ||||| |||||||||    
T  16885426 ctcactgcctccctg--atcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 1532958 - 1532884
Alignment:
Q  123 tcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  1532958 tcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaaca 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 52 - 197
Target Start/End: Original strand, 2479815 - 2479960
Alignment:
Q  52 aatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaa-tcgtgtcacgatgccaaaatcgtgtcac 150  Q
    |||||||| |||||||| ||| |||| | ||||||||| |  |||| |||| |||||||||| | | |||| ||||||||||||||||||||||||||||    
T  2479815 aatcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacggc-attagaaaatcgtgtcacgatgccaaaatcgtgtcac 2479913  T
Q  151 gatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     ||||| |||||||| || ||||||||||||||| ||||| ||||||    
T  2479914 aatttctctgttcttacaaaccacaaatttgaagccaaatttcaaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 24261000 - 24260833
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc- 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||| || | | ||  || | |||||| |||     
T  24261000 gtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagattacttggctcactgcct 24260901  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | ||  |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  24260900 ccctg--atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 24260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 47264190 - 47264267
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||| ||||||    
T  47264190 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaaatttcaaca 47264267  T

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Target: chr7; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 44847696 - 44847617
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||| ||||| ||||||||    
T  44847696 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttcaacaat 44847617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 21983790 - 21983867
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||||||||||   |||||||||||||||||| ||||||||||| ||||||||||||||| ||| | ||||||    
T  21983790 aaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 21983867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 21989454 - 21989532
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    ||||||||||||||||   ||||| |||||||||||| ||||||||||| ||||||||||||||| ||| | |||||||    
T  21989454 aaatcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaactttcaacaa 21989532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 18390506 - 18390562
Alignment:
Q  140 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagac-aatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 1562408 - 1562479
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgattt 88  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| |||| |||| | ||||||||    
T  1562408 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 79955 - 80000
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaag 80000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 4509335 - 4509369
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 154  Q
    ||||||||||||||| |||||||||||||||||||    
T  4509335 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4509369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 4511177 - 4511211
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 154  Q
    ||||||||||||||| |||||||||||||||||||    
T  4511177 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 6431501 - 6431467
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 154  Q
    ||||||||||||||| |||||||||||||||||||    
T  6431501 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 6431467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 14070348 - 14070382
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 154  Q
    |||||||| ||||||||||||||||||||||||||    
T  14070348 aaatcgtgccacgatgccaaaatcgtgtcacgatt 14070382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 14380376 - 14380410
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 154  Q
    |||||||| ||||||||||||||||||||||||||    
T  14380376 aaatcgtgccacgatgccaaaatcgtgtcacgatt 14380410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 18389165 - 18389215
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt 67  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||    
T  18389165 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 18389215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 49092237 - 49092282
Alignment:
Q  138 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 183  Q
    ||||||||||||| ||||| ||||||||||| || |||||||||||    
T  49092237 aaaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 4178496 - 4178440
Alignment:
Q  52 aatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctc 108  Q
    ||||||||||||||||||||| |||| | ||||||| | || ||||||||| |||||    
T  4178496 aatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaccagctc 4178440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 11857372 - 11857555
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  11857372 gacccaaggttgacaagtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 11857471  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11857472 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 11857555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 14742121 - 14741938
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||    
T  14742121 gacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaa 14742022  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14742021 actagctcacgaccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 14741938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 22010384 - 22010201
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  22010384 gacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 22010285  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22010284 actaacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 22010201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 30125185 - 30125030
Alignment:
Q  29 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgt 128  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||  || ||||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgt 30125086  T
Q  129 cacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30125085 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 30125030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 14737261 - 14737128
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||    
T  14737261 gacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaa 14737162  T
Q  101 actagctcacggccacttgaaatcgtgtcacgat 134  Q
    ||||||||||||||||||||||||||||||||||    
T  14737161 actagctcacggccacttgaaatcgtgtcacgat 14737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 16578922 - 16579102
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| |||||||||| ||  |||| || ||||||||||||  |    
T  16578922 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcacc 16579021  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
      |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16579022 ccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 16579102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 16616458 - 16616278
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| |||||||||| ||  |||| || ||||||||||||  |    
T  16616458 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcacc 16616359  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
      |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16616358 ccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 16616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 197
Target Start/End: Complemental strand, 27647635 - 27647467
Alignment:
Q  29 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgt 128  Q
    |||||||||||||||||||||   |||||||||||||||| ||  |||| |||||||||| ||  |||| || ||||||||||||  |  ||||||||||    
T  27647635 gatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgt 27647536  T
Q  129 cacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27647535 cacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaaactcaaca 27647467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 6438894 - 6439071
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||  || ||| | |||| | |    
T  6438894 aggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttgg 6438993  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||| ||| |  |||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  6438994 ctcacgg-cacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaag 6439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 3073163 - 3073343
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   |||||||||||||||||| |  |||| | |||||||||||  |||| | || ||||||||||  |    
T  3073163 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtagaccagctcacggcatc 3073262  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3073263 acgaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagaccacaaatttgaagacaaatctcaaca 3073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 411866 - 411683
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggcca 115  Q
    ||||||||||  || ||||||||||||||||| |  ||||||||||||||||||||  |||| | |||||||||||  |||| | |||||||||||||      
T  411866 gtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcac 411767  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
    |  ||||| ||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  411766 cacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatctcaacaat 411683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 5674409 - 5674227
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||  |||||||||||||||||||||||| | | |||||||||||  |||| |||| ||||||||||  |    
T  5674409 gtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatc 5674310  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
       ||||| ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||    
T  5674309 acaaaatcatgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaactatcaacaat 5674227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 2171939 - 2172104
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   |||||||||||||||||||||||||| | |||||||||||  |||| |||| ||||||||||  |  |||||||||||||    
T  2171939 acttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 2172038  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||| || |||| ||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  2172039 gatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 2172104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 16554633 - 16554454
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| ||||| |||| ||  |||| || ||||||||||||  |    
T  16554633 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcacc 16554534  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16554533 ccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 16631189 - 16631010
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| ||||| |||| ||  |||| || ||||||||||||  |    
T  16631189 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcacc 16631090  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16631089 ccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 22709465 - 22709645
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   |||||||||||||||||||||||||| | |||||||||||  |||| |||| |||||| |||  |    
T  22709465 gtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcatggcatc 22709564  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
       ||||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  22709565 acaaaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 22709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 5266493 - 5266610
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  |    
T  5266493 gtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 5266592  T
Q  117 ttgaaatcgtgtcacgat 134  Q
    | ||||||||||||||||    
T  5266593 tcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 6136368 - 6136549
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||  |||| ||||||||||     |||| || | |||||||||||      
T  6136368 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctcacggcat 6136467  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
    |  ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6136468 cc-gaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacaat 6136549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 197
Target Start/End: Original strand, 16839137 - 16839331
Alignment:
Q  3 cccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac 102  Q
    ||||||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | ||||    
T  16839137 cccaaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaac 16839236  T
Q  103 -tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     | |||||||| ||  |   |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  16839237 ttggctcacgg-catctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 16839331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 25420976 - 25420797
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| |||||||||||    |||| || | |||||||||||      
T  25420976 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggcat 25420877  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |  |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25420876 cc-gaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 7 - 197
Target Start/End: Complemental strand, 33330122 - 33329932
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  33330122 aggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttgg 33330023  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||  |   |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33330022 ctcacgg-catctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 6027014 - 6026834
Alignment:
Q  16 ggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||||||| || | |||| |||||||||||    |||| || | |||||| ||  |    
T  6027014 ggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctctcgcac 6026915  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     || ||||||||||||| |||||  |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||    
T  6026914 -ctcgaaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaagac-aatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 6097870 - 6097988
Alignment:
Q  81 cacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    |||||||| ||  |||| |||| ||||||||||  |  |||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  6097870 cacgatttagcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaaccacaaattt 6097969  T
Q  181 gaagacaaatctcaacaat 199  Q
    |||||||||||||||||||    
T  6097970 gaagacaaatctcaacaat 6097988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 33342508 - 33342688
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||||||| | |||| |||||||||||    |||| || | |||||||||||     
T  33342508 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 33342607  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     |  ||||||| ||| |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||    
T  33342608 tcc-gaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagac-aatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 34166846 - 34166673
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  34166846 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggca 34166747  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
     |  ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34166746 tcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 34166673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 197
Target Start/End: Complemental strand, 33335619 - 33335429
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  33335619 aggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttgg 33335520  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||  |   |||||||||||||  | |||||| |  |||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33335519 ctcacgg-catctccgatcgtgtcacgattgccaaatcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33335429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 13151029 - 13150856
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  13151029 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggca 13150930  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
     |  ||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  13150929 tcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 13150856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 201
Target Start/End: Complemental strand, 34164624 - 34164440
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  34164624 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggca 34164525  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 201  Q
     |  ||||||| |||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  34164524 tcc-gaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa-ctcaacaataa 34164440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 198
Target Start/End: Original strand, 6005817 - 6006008
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  6005817 aggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttgg 6005916  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    |||| || ||  |   |||||||||||||  | |||||| | ||||||| | ||||| ||||| ||||||||||||||| ||| | |||||||    
T  6005917 ctcatgg-catctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaattttcaacaa 6006008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 5343885 - 5344052
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc- 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||| || | | ||| || | ||||||  ||     
T  5343885 gtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagaagacttggctcacttcct 5343984  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | ||  |||||||||||||| | |||||||| ||||||||| ||||||| ||| |||||||||||||||    
T  5343985 ccctg--atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaag 5344052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 26253666 - 26253589
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  26253666 aaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagacaaatctcaaca 26253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 28155260 - 28155179
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgattt 88  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  28155260 aggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattt 28155179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 34151905 - 34151824
Alignment:
Q  119 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 201  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  34151905 gaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa-ctcaacaataa 34151824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 23896880 - 23896957
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| || ||||||||||||||| ||||| ||||||    
T  23896880 aaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 23896957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 16652773 - 16652716
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16652773 aaatcgtgtcacgatttccctgttctttcagaccacaaatttgaagac-aatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 5266596 - 5266641
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  5266596 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 5266641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 14737142 - 14737097
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 14737097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 28155145 - 28155102
Alignment:
Q  141 atcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaag 28155102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 5757116 - 5756950
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    ||||||| |||||||||   ||||||||||||||||| ||| ||||  |||||||||| |  |||| |||| | |||||| |      |||| |||||||    
T  5757116 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgacattacaaaattgtgtcac 5757017  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    ||||||| ||||||||||| ||||| || |||||  | |||| |||||| ||| ||||| |||||||    
T  5757016 gatgccacaatcgtgtcacaatttctctattcttttaaaccataaatttaaagccaaatttcaacaa 5756950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 5017026 - 5016981
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaag 5016981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 31086003 - 31085958
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaag 31085958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 5571806 - 5571755
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 190  Q
    |||||||||||||||||| || |||| ||| | |||||||||||||||||||    
T  5571806 aaatcgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaat 5571755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 25421070 - 25421020
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt 67  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||    
T  25421070 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 25421020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 16652876 - 16652759
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   || |||||||||||| || | ||||  |||||| || ||  |||  || ||||||||||||  |    
T  16652876 gtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttccacgactttgcaccctacaacctagctcacggcacc 16652777  T
Q  117 ttgaaatcgtgtcacgat 134  Q
      ||||||||||||||||    
T  16652776 ccgaaatcgtgtcacgat 16652759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 21272514 - 21272474
Alignment:
Q  144 gtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||||| |||| | |||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaag 21272474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 6311740 - 6311923
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  6311740 gacccaaggttgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 6311839  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  6311840 actagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagaccacaaatttgaag 6311923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 25327859 - 25327676
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||    
T  25327859 gacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaa 25327760  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25327759 actagctcacagccacttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 25327676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 18852823 - 18852639
Alignment:
Q  1 gacccaaggt-tgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaa 99  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  18852823 gacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgca 18852724  T
Q  100 aactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  18852723 aactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaatttgaag 18852639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 10683918 - 10683751
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  |    
T  10683918 gtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 10683819  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10683818 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 10683751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 18870217 - 18870033
Alignment:
Q  1 gacccaaggt-tgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaa 99  Q
    |||||||||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  18870217 gacccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgca 18870118  T
Q  100 aactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18870117 aactagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 18870033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 30656086 - 30656270
Alignment:
Q  1 gacccaaggtt-gacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaa 99  Q
    ||||||||||| |||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  30656086 gacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgca 30656185  T
Q  100 aactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30656186 aactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 30656270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 33037466 - 33037299
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||  |    
T  33037466 gtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacc 33037367  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33037366 tcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 33037299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 36979835 - 36980002
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||  |    
T  36979835 gtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 36979934  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36979935 tcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 36980002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 7289620 - 7289439
Alignment:
Q  4 ccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaact 103  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| |||||    
T  7289620 ccaaggtagacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaact 7289521  T
Q  104 agctcacggc-cacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||| ||| | ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  7289520 agctcatggctcccttgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaag 7289439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 4759713 - 4759546
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  |    
T  4759713 gtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 4759614  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    | ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  4759613 tcgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4759546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 10688794 - 10688661
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  10688794 gacccaaggttgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 10688695  T
Q  101 actagctcacggccacttgaaatcgtgtcacgat 134  Q
    |||||||||||||  |||||||||||||||||||    
T  10688694 actagctcacggcaccttgaaatcgtgtcacgat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 39784514 - 39784337
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  39784514 aggttgaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttgg 39784415  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||| ||| |  |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39784414 ctcacgg-cacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 39784337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 2627497 - 2627318
Alignment:
Q  18 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccact 117  Q
    |||||||||  || |||||||||||||||||   ||||||||||||||||||||| |||| | |||||||||||  | || |||| |||||||||   |     
T  2627497 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacggaatca 2627398  T
Q  118 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2627397 cgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 2627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 1261594 - 1261414
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  ||||||||||||||||||||   |||||||||||||||||||||||||| | |||||||||||  |||| |||||||||||||||  |    
T  1261594 gtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatc 1261495  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||||| ||||||| |||||||  |||||||||| ||||||||||||||  ||||| ||||||    
T  1261494 acgaaatcgtgtcacgatgccaaattcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaaaccaaatatcaaca 1261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 3439266 - 3439088
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||| | |||||||| ||  |||| || ||||||||||||  |    
T  3439266 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaacctagctcacggcacc 3439168  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  3439167 ccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagac-aatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 26288337 - 26288520
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||| |||||||||||||||||||| | | |||||||||||  |||| |||| ||||||||||  |    
T  26288337 gtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatc 26288436  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 200  Q
       ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  26288437 acaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaata 26288520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 26301594 - 26301777
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||| |||||||||||||||||||| | | |||||||||||  |||| |||| ||||||||||  |    
T  26301594 gtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatc 26301693  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 200  Q
       ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  26301694 acaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaata 26301777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 26313588 - 26313771
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||| |||||||||||||||||||| | | |||||||||||  |||| |||| ||||||||||  |    
T  26313588 gtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatc 26313687  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 200  Q
       ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  26313688 acaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaata 26313771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 42575729 - 42575909
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  42575729 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaaccctaactcacggca 42575828  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     |  ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  42575829 tcc-gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 31043024 - 31042908
Alignment:
Q  81 cacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    |||||||||||  |||| |||| ||||||||||  |  |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  31043024 cacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagaccacaaattt 31042925  T
Q  181 gaagacaaatctcaaca 197  Q
    |||| ||||||||||||    
T  31042924 gaagtcaaatctcaaca 31042908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 7412787 - 7412952
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttga-aatcgtgtca 130  Q
    ||||||| |||||||||   ||||||||||||||||| ||| || |  |||||||||| |  |||| |||| |||||||||| | |  | ||||||||||    
T  7412787 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggc-attacagaatcgtgtca 7412885  T
Q  131 cgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  7412886 cgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 15290323 - 15290143
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  15290323 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggca 15290224  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     |  ||||||||||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  15290223 tcc-gaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 15290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 15470692 - 15470512
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  15470692 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggca 15470593  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     |  ||||||||||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  15470592 tcc-gaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 15470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 35745789 - 35745979
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || |||   |||| | |    
T  35745789 aggttgaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttgg 35745888  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||  |   |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  35745889 ctcacgg-catctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 35745979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 25689618 - 25689558
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagac-aatctcaacaata 25689558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 25689720 - 25689604
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   ||||||| |||||||||||  |||| |||||||||| ||  |||| || ||||||||||| |||    
T  25689720 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgcaacctagctcacgg-cac 25689622  T
Q  117 ttgaaatcgtgtcacgat 134  Q
      ||||||||||||||||    
T  25689621 ccgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 10688675 - 10688630
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 10688630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 5702009 - 5701964
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 5701964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 4456575 - 4456625
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||| ||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaa 4456625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 11383440 - 11383406
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 154  Q
    |||||||| ||||||||||||||||||||||||||    
T  11383440 aaatcgtgccacgatgccaaaatcgtgtcacgatt 11383406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 23799149 - 23799105
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 183  Q
    ||||||||| |||||||| |||||||| || ||||||||||||||    
T  23799149 aaatcgtgttacgatttctctgttctttcaaaccacaaatttgaa 23799105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 1456833 - 1456650
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  1456833 gacccaaggtagacaagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaa 1456734  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1456733 actagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1456650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 27450214 - 27450397
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  27450214 gacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 27450313  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27450314 actagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 27450397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 27445371 - 27445554
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  27445371 gacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 27445470  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27445471 actagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttgaag 27445554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 184
Target Start/End: Complemental strand, 29402728 - 29402562
Alignment:
Q  18 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccact 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccact 29402629  T
Q  118 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29402628 tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 29402562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 43599122 - 43599306
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  43599122 gacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 43599221  T
Q  101 actagctcacgg-ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43599222 actagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43599306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 43604614 - 43604798
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  43604614 gacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 43604713  T
Q  101 actagctcacgg-ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43604714 actagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43604798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 43610106 - 43610290
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  43610106 gacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 43610205  T
Q  101 actagctcacgg-ccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||| || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43610206 actagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43610290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 30631753 - 30631936
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||| |||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||    
T  30631753 gacccaagattgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaa 30631852  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||| |||||||||  || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30631853 actggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 30631936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 15045085 - 15045267
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  15045085 gaccccaggttgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 15045184  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||| |||||||| ||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  15045185 actggctcacgg-catctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaag 15045267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 18442053 - 18442233
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||| | |||||||||||  |||| |||| ||||||||||  |    
T  18442053 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 18442152  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18442153 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 18442233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 9789629 - 9789809
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||| | |||||||||||  |||| |||| ||||||||||  |    
T  9789629 gtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 9789728  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9789729 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9789809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 26177646 - 26177466
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   |||||||||||||||||||| ||||| | |||||||||||  |||| |||| ||||||||||  |    
T  26177646 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 26177547  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26177546 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 26177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 29720146 - 29719965
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggcca 115  Q
    ||||||||||  || ||||||||||||||||| |  ||||||||||||||||||||  |||| | |||||||||||  |||| | |||||||||||||      
T  29720146 gtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcac 29720047  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29720046 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29719965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 43592677 - 43592811
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  43592677 gacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 43592776  T
Q  101 actagctcacgg-ccacttgaaatcgtgtcacgat 134  Q
    |||||||||||| || |||||||||||||||||||    
T  43592777 actagctcacggcccccttgaaatcgtgtcacgat 43592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 22536673 - 22536853
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||||||  || | |||||||||| ||  |||| || ||||||||||||  |    
T  22536673 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaacctagctcacggcacc 22536772  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
      |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22536773 ccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 22536853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 24136304 - 24136485
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  ||||||||||||||||||||   |||||||||||||||||||||||||| | |||||||||||  |||| |||||||||||||||  |    
T  24136304 gtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatc 24136403  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
      ||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||  ||||| |||||||    
T  24136404 acgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtgttcttccagaccacaaatttgaaaccaaatatcaacaa 24136485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 31180654 - 31180787
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  31180654 gacccaaggttgaccagtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 31180753  T
Q  101 actagctcacggccacttgaaatcgtgtcacgat 134  Q
    ||||||||||| |  |||||||||||||||||||    
T  31180754 actagctcacgacaccttgaaatcgtgtcacgat 31180787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 29722332 - 29722152
Alignment:
Q  18 tccttatcagtgatacttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    |||||||||  || ||||||||||||||||| |  ||||||||||||||||||||  |||| | |||||||||||  | || | |||||||||| ||  |    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcacc 29722233  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29722232 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 16407822 - 16407641
Alignment:
Q  16 ggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggcca 115  Q
    |||||||||||  || |||||||||||||||||   ||||||||||||||| | |||||||| | |||||||||||  |||| |||| ||||||||||      
T  16407822 ggtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcat 16407723  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |   |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  16407722 cacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 16407641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 10593022 - 10592844
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| |||||||||| ||  |||| || ||| |||||||| ||    
T  10593022 gtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctatctcacggc-ac 10592924  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10592923 ccggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 74 - 197
Target Start/End: Original strand, 29752267 - 29752390
Alignment:
Q  74 atcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagacca 173  Q
    |||| |||||||||||||  |||| || ||||||||||||  |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29752267 atcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacca 29752366  T
Q  174 caaatttgaagacaaatctcaaca 197  Q
    ||||||||||||||||||||||||    
T  29752367 caaatttgaagacaaatctcaaca 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 25077885 - 25077713
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||  |||| | |||||||||    |||  || | ||||||||||| |    
T  25077885 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcacggc-a 25077787  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
    | |  ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25077786 cctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 25077713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 25135854 - 25135682
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||  |||| | |||||||||    |||  || | ||||||||||| |    
T  25135854 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcacggc-a 25135756  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
    | |  ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25135755 cctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 25135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 16409257 - 16409077
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||| | |||||||| | ||| |||||||  | || |||| |||||||| |  |    
T  16409257 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaaccagctcacgacatc 16409158  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
       ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  16409157 acaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 16409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 26170537 - 26170357
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   |||  ||||||||||||||| ||||| | |||||||||||  |||| |||| ||||||||||  |    
T  26170537 gtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 26170438  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
       ||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||||| |||| |||||||    
T  26170437 acaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaagccaaaactcaaca 26170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 40379857 - 40379676
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| | ||||| || ||  |||| || | ||||||||||| |    
T  40379857 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggc-a 40379759  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
    | |  |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40379758 cctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaat 40379676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 28807265 - 28807088
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||| ||  |||| |||| | |    
T  28807265 aggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttgg 28807166  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||| ||  | | |||||||||||||  |||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  28807165 ctcacgg-catctcagatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaag 28807088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 37561126 - 37560953
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||| |  | | ||||| | |||||||| ||    
T  37561126 gtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacgg-ca 37561028  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 190  Q
      | | |||||||||||||    |||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  37561027 tctcagatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37560953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 2785773 - 2785963
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  2785773 aggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttgg 2785872  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||  |   |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  2785873 ctcacgg-catctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 2785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 33768582 - 33768772
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  33768582 aggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttgg 33768681  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||  |   |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33768682 ctcacgg-catctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 33791714 - 33791904
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  33791714 aggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttgg 33791813  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||  |   |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33791814 ctcacgg-catctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33791904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 190
Target Start/End: Complemental strand, 37556304 - 37556131
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||| |||||||||| |||||||||||  |||||||||| |||||||||||||| ||||||||||| |  | | ||||| | |||||||| ||    
T  37556304 gtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacgg-ca 37556206  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 190  Q
      | | |||||||||||||  | |||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  37556205 tctcagatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37556131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 16546395 - 16546216
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| | ||||| || ||  |||| || | ||||||||||| |    
T  16546395 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggc-a 16546297  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    | |  |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  16546296 cctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 40382068 - 40381889
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| | ||||| || ||  |||| || | ||||||||||| |    
T  40382068 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggc-a 40381970  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    | |  |||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  40381969 cctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagac-aatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 29751608 - 29751724
Alignment:
Q  81 cacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    |||||||||||  |||| || ||||||||||||  |  |||||||||||  ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  29751608 cacgatttggcaccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagaccacaaattt 29751707  T
Q  181 gaagacaaatctcaaca 197  Q
    |||||||||||||||||    
T  29751708 gaagacaaatctcaaca 29751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 9352972 - 9352807
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    ||||||| |||||||||   ||||||||||||||||| ||  |||| ||||||||||| |  |||| |||| ||||||||||      ||||||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcac 9352873  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||||| ||||||||||| |||||||| || ||||||||||||||| ||||||||||||    
T  9352872 gatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaaatctcaaca 9352807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 16544173 - 16543994
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| | ||||| || ||  |||| || | |||||||| || |    
T  16544173 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagctcacagc-a 16544075  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    | |  |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  16544074 cctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 15465009 - 15465125
Alignment:
Q  81 cacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    |||||||||||  |||| |||| ||||||||||  |   ||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||    
T  15465009 cacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaattt 15465108  T
Q  181 gaagacaaatctcaaca 197  Q
    |||| ||||||||||||    
T  15465109 gaagccaaatctcaaca 15465125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 31396679 - 31396488
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| || ||||||| | ||||| |||||||||||||||||||||||||||||| | |||||||| || ||| | |||| |||    
T  31396679 aggttgaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttag 31396580  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    ||||| ||| | |   |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||| | |||||||    
T  31396579 ctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 31396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 197
Target Start/End: Complemental strand, 31401536 - 31401346
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| || ||||||  |||||||||||||||| ||||||||||||||||||||| | |||||||| || ||| | |||| |||    
T  31401536 aggttgaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttag 31401437  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||| ||| | |   |||||||||||||  | |||||||| ||||||| | || |||| ||| ||||||||||||||| ||| | ||||||    
T  31401436 ctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaattttcaaca 31401346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 36931920 - 36931843
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||  |||||||||||    
T  36931920 aaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagcgaaatctcaaca 36931843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 35388196 - 35388246
Alignment:
Q  147 tcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaagtcaaatctcaaca 35388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 31180773 - 31180818
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 31180818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 43592797 - 43592842
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43592842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 14520796 - 14520855
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||| | |||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacaa 14520855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 38219850 - 38219946
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggc 113  Q
    ||||||||||  || ||||||| |||||||||   ||||||||||| |||||||||||||| | |||||||||||  |||  |||| ||||||||||    
T  38219850 gtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaaccagctcacggc 38219946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 29751565 - 29751615
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt 67  Q
    ||||||||||  |||||||||||||||||||||  ||||||||||||||||    
T  29751565 gtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 11916502 - 11916452
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
    |||| ||||||||||||| |||||||| || ||||||||||||||| ||||    
T  11916502 aaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaaa 11916452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 12083708 - 12083667
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    |||||||||||||||||| ||||||||||| |||| ||||||    
T  12083708 aaatcgtgtcacgatttctctgttcttccaaaccataaattt 12083667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 4e-78; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 28501347 - 28501164
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||| ||    
T  28501347 gacccaaggttgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaa 28501248  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  28501247 actagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaag 28501164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 28503514 - 28503331
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||    
T  28503514 gacccaaggttgacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaa 28503415  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  28503414 actagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaag 28503331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 7167686 - 7167870
Alignment:
Q  1 gacccaaggt-tgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaa 99  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  7167686 gacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgca 7167785  T
Q  100 aactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  7167786 aactagctcacggcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaag 7167870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 22172854 - 22172674
Alignment:
Q  4 ccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaact 103  Q
    |||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  22172854 ccaaggttgaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 22172755  T
Q  104 agctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     |||||||||  || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22172754 ggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 22172674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 40372435 - 40372268
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  |    
T  40372435 gtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 40372336  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40372335 tcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 40372268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 8477823 - 8477990
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| | |||||||||||||||  |    
T  8477823 gtccttatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcacc 8477922  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    | |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  8477923 tcgaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttccagaccacaaatttgaag 8477990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 27352260 - 27352097
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||| |||| ||||||||||  |    
T  27352260 gtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaaacaagctcacggcacc 27352161  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  27352160 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaaattt 27352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 18656839 - 18657017
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagc 106  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||    
T  18656839 aggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgc 18656938  T
Q  107 -tcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     |||||||  |  ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  18656939 ttcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaag 18657017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 2671244 - 2671111
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||  |    
T  2671244 gtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcacc 2671145  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcac 150  Q
    |||||||| |||||||||||||||||||||||||    
T  2671144 ttgaaatcatgtcacgatgccaaaatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 54634889 - 54634710
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||| |||||||||| ||  |||| ||  |||||||||||  |    
T  54634889 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctcacggcacc 54634790  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54634789 ccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 54634710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 800864 - 800685
Alignment:
Q  18 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccact 117  Q
    |||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||| | |||||||||||  || | |||| ||||||||||  |     
T  800864 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacggcatca 800765  T
Q  118 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  800764 cgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaagacaaatctcaaca 800685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 1306439 - 1306604
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||  |||| |||| |||||||| |  |  |||||||||||||    
T  1306439 acttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcac 1306538  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||| || |||||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  1306539 gatgccaaattcatgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 1306604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 6716264 - 6716084
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||| | |||||||| ||  |||| || ||||||||||||  |    
T  6716264 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcacc 6716165  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
      |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  6716164 ccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagac-aatctcaacaa 6716084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 8738702 - 8738585
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||  |    
T  8738702 gtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcacc 8738603  T
Q  117 ttgaaatcgtgtcacgat 134  Q
    |||||||| |||||||||    
T  8738602 ttgaaatcatgtcacgat 8738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 9090940 - 9090823
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||  |    
T  9090940 gtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcacc 9090841  T
Q  117 ttgaaatcgtgtcacgat 134  Q
    |||||||| |||||||||    
T  9090840 ttgaaatcatgtcacgat 9090823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 26928245 - 26928078
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   ||||||||||||||| | |||||| | | |||||||||||  |||| |||| ||||||||||      ||||||||||||    
T  26928245 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcac 26928146  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  26928145 gatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacaat 26928078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 4598927 - 4599107
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||||||| | |||| |||||||||||    |||| || | |||||||||||     
T  4598927 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 4599026  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     |  ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  4599027 tcc-gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 4601148 - 4601328
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||||||| | |||| |||||||||||    |||| || | |||||||||||     
T  4601148 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcacggca 4601247  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     |  ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  4601248 tcc-gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 25637192 - 25637012
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||| |||||||||||    |||| || | |||||| ||  |     
T  25637192 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctctcgcac- 25637094  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  25637093 ctcgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagac-aatctcaacaa 25637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 2672608 - 2672416
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||| || ||| | |||| | |    
T  2672608 aggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttgg 2672509  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
    ||| ||| ||  |   |||||||||||||  |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||  |||||||    
T  2672508 ctcccgg-catctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaattccaacaat 2672416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 23198365 - 23198530
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   ||||||||||||||| | | | |||| | |||||||||||  |||| |||| ||||||||||  |   ||||||||||||    
T  23198365 acttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 23198464  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  23198465 gatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 23200564 - 23200729
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   ||||||||||||||| | | | |||| | |||||||||||  |||| |||| ||||||| ||  |   ||||||||||||    
T  23200564 acttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacagcatcacaaaatcgtgtcac 23200663  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  23200664 gatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23200729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 197
Target Start/End: Complemental strand, 3617201 - 3617034
Alignment:
Q  29 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggccacttgaaatcgtg 127  Q
    |||||||||||||||||||||   ||||||||||||||| || | |||| | |||||||||    |||| || | |||||||||||  |  |||||||||    
T  3617201 gatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacgatttgcacccctgcaaccctagctcacggcatcc-gaaatcgtg 3617103  T
Q  128 tcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3617102 tcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 33386302 - 33386137
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    ||||||| |||||||||   ||||||||||||||| | ||| |||| | |||||||||||  |||| |||| ||||||||||  |   ||||||||||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 33386203  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||| ||||||||||||||| |||||||| | |||||||||||||||| ||||||||||||    
T  33386202 gatgccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaaatctcaaca 33386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 10055985 - 10055812
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  10055985 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggca 10055886  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
     |  ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10055885 tcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 10058207 - 10058034
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  10058207 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggca 10058108  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
     |  ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10058107 tcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10058034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 10060429 - 10060256
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  10060429 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggca 10060330  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
     |  ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10060329 tcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10060256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 10062651 - 10062478
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  10062651 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggca 10062552  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
     |  ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10062551 tcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10062478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 10064873 - 10064700
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  10064873 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggca 10064774  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
     |  ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10064773 tcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10064700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 10067095 - 10066922
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||| ||||| |||| | |||||||||    |||| || | || ||||||||     
T  10067095 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcacggca 10066996  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
     |  ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10066995 tcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10066922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 190
Target Start/End: Complemental strand, 2676764 - 2676581
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| | |||||||| || ||| | |||| | |    
T  2676764 aggttgaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttgg 2676665  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 190  Q
    ||| | | ||  |   |||||||||||||  |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  2676664 ctc-ccgacatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2676581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 7782596 - 7782712
Alignment:
Q  81 cacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    |||||||||||  |||| |||| ||||||| ||  |  |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  7782596 cacgatttggcaccctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctagaccacaaattt 7782695  T
Q  181 gaagacaaatctcaaca 197  Q
    |||| ||||||||||||    
T  7782696 gaagccaaatctcaaca 7782712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 8512648 - 8512815
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc- 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| |||||||| |||     
T  8512648 gtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcct 8512747  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | ||  ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  8512748 ccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 8512815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 10208958 - 10208778
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  |||| |||||||||||||||||  ||||||||||||||| ||||| |||| |||||||||||    |||| || | || ||||||||     
T  10208958 gtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactcacggca 10208859  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     |  ||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10208858 tcc-gaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 10208778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 10211158 - 10210978
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt-cccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||| ||||| ||||| |||| |||||||||||    |||| || | || ||||||||     
T  10211158 gtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactcacggca 10211059  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     | | |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  10211058 tcct-aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagac-aatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 8517528 - 8517695
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc- 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| |||||||| |||     
T  8517528 gtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcct 8517627  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | ||  ||||||||||||   |||||||||| ||||||| | ||||||| | | ||||| |||||||||    
T  8517628 ccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcctaaaccactaatttgaag 8517695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 32475892 - 32476059
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc- 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||| || | | || ||| | |||||| |||     
T  32475892 gtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcactgcct 32475991  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | ||  |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  32475992 ccctg--atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 32476059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 32480750 - 32480917
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc- 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||| || | | || ||| | |||||| |||     
T  32480750 gtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcactgcct 32480849  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | ||  |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  32480850 ccctg--atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 32480917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 198
Target Start/End: Original strand, 37726154 - 37726300
Alignment:
Q  52 aatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacg 151  Q
    ||||||||||||||| | ||| |||| | ||||||||| |  |||| |||| ||||||||||  |   |||||||||||||||  |||| ||||||||||    
T  37726154 aatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatatcaaattcgtgtcacg 37726253  T
Q  152 atttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  37726254 atttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 37726300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 24968515 - 24968692
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  24968515 aggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttgg 24968614  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||| ||| |     |||||||||||||  | |||||||| ||||||| |  |||||||||| ||||| |||||||||    
T  24968615 ctcactgcctc-cccgatcgtgtcacgattgccaaatcgtgacacgattcctttgttcttccaaaccactaatttgaag 24968692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 37408180 - 37408036
Alignment:
Q  52 aatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccact-tgaaatcgtgtcacgatgccaaaatcgtgtcac 150  Q
    |||||||||||||||| |  | |||| ||||||||||| |  |||| |||| ||||||||| ||||   ||||||||||||||||||| |||||||||||    
T  37408180 aatcgtgtcacgatttacaca-atcgtgccacgatttgacaccctgcaaaccagctcacgg-cactacaaaatcgtgtcacgatgccacaatcgtgtcac 37408083  T
Q  151 gatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||  |||||||||| ||||||||||||||| ||||||||||||    
T  37408082 gatttctttgttcttccaaaccacaaatttgaagccaaatctcaaca 37408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 27453416 - 27453581
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    ||||||| |||||||||   ||||||||||||||| | ||  |||  | |||||||||||  |||  |||| ||||||||||  |   ||||||||||||    
T  27453416 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcacaaaatcgtgtcac 27453515  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||| ||||||||| ||||| ||| |||| |||||||||||||||||| ||||||||||||    
T  27453516 gatgccaaattcgtgtcacaatttctctgctctttcagaccacaaatttgaagccaaatctcaaca 27453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 45282642 - 45282583
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45282642 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaat 45282583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 6718345 - 6718288
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6718345 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 32143868 - 32143928
Alignment:
Q  137 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  32143868 caaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 32143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 6718448 - 6718331
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||||||  |||| | |||||||| ||  |||| || ||||||||||||  |    
T  6718448 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcacc 6718349  T
Q  117 ttgaaatcgtgtcacgat 134  Q
      ||||||||||||||||    
T  6718348 ccgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 27974493 - 27974433
Alignment:
Q  137 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 32143782 - 32143863
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggc 113  Q
    |||||||||||||||||   ||||||||||||||| | |||||||| | |||||||||||  |||| |||||||||||||||    
T  32143782 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacggc 32143863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 27986017 - 27985957
Alignment:
Q  137 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||  ||||||||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaaatcaaatctcaaca 27985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 36029640 - 36029704
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||| |||| ||  ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  36029640 aaatcgtgacacgttgataaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 36029704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 40734132 - 40734084
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 187  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagaca 40734084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 40845220 - 40845279
Alignment:
Q  138 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||||||||||||| ||||||| ||| | || |||||||||||||||||||||||    
T  40845220 aaaatcgtgtcacgatttctctgttctcccaaaacataaatttgaagacaaatctcaaca 40845279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 16264896 - 16264941
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaag 16264941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 21711768 - 21711813
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21711813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 27027273 - 27027318
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 30709316 - 30709271
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 30709271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 45282745 - 45282628
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||| | ||||| || ||  |||| || ||||||||||||  |    
T  45282745 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctcacggcacc 45282646  T
Q  117 ttgaaatcgtgtcacgat 134  Q
      ||||||||||||||||    
T  45282645 ccgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 8738593 - 8738554
Alignment:
Q  145 tgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  8738593 tgtcacgatttctctgttcttccagaccacaaatttgaag 8738554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 9090831 - 9090792
Alignment:
Q  145 tgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  9090831 tgtcacgatttctctgttcttccagaccacaaatttgaag 9090792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 27038588 - 27038667
Alignment:
Q  119 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    |||||||||||||| ||   |||||||||||||||||| ||||| ||||| |||||||| |||||| ||| | |||||||    
T  27038588 gaaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaacaa 27038667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 39032075 - 39032017
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||||||||||||| ||||||||||| || |||||||||||| ||| | ||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaaca 39032017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 40735063 - 40735015
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 187  Q
    |||||||||||||||||  |||||| |||| ||||||||||||||||||    
T  40735063 aaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaagaca 40735015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 1730959 - 1730921
Alignment:
Q  146 gtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaag 1730921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 35926057 - 35926101
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaag 35926101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 40592302 - 40592257
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||||    
T  40592302 aaatcatgtcacgatttctccgttcttccaaaccacaaatttgaag 40592257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 48438782 - 48438823
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    |||||||||||||||||| |||||||| || |||||||||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaattt 48438823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 34749 - 34566
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||    
T  34749 gacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcatgcaa 34650  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    || | || ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34649 acaaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 34566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 3526 - 3349
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagc 106  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  3526 aggttgactagtccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaactagc 3427  T
Q  107 tcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||    
T  3426 tcacggccacttgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaag 3349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 39811670 - 39811489
Alignment:
Q  3 cccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac 102  Q
    |||||||  |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  39811670 cccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac 39811571  T
Q  103 tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    | ||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39811570 ttgcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 39811489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 11098566 - 11098399
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  |    
T  11098566 gtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 11098467  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11098466 ttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 11098399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 14291946 - 14292113
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  |    
T  14291946 gtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 14292045  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    | || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14292046 tcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 14292113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 9296058 - 9295874
Alignment:
Q  1 gacccaaggt-tgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaa 99  Q
    |||||||||| ||||  ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |    
T  9296058 gacccaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgca 9295959  T
Q  100 aactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9295958 aactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9295874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 32 - 198
Target Start/End: Original strand, 3492212 - 3492378
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||  |||| |||| ||||||||||  |   ||||||||||||    
T  3492212 acttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 3492311  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    ||||||||| ||||||||| ||||| |||||||| |||||||||||||||||| |||||||||||||    
T  3492312 gatgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaaatctcaacaa 3492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 4484743 - 4484924
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||| |  ||||||| | |||||||||||  |||| |||||||||||||||  |    
T  4484743 gtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatc 4484842  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
     ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  4484843 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtaaaatctcaacaa 4484924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 25410087 - 25410267
Alignment:
Q  18 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccact 117  Q
    |||||||||  ||||||||||||||||||||   |||||||||||||||||||||||||| | |||||||||||  |||| |||| | ||||||||  |     
T  25410087 tccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatca 25410186  T
Q  118 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
      ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  25410187 caaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaaactcaacaa 25410267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 30833086 - 30832921
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   |||||||||||||||||||||||||| | |||||||||||  |||| |||| ||||||||||  |  |||||||||||||    
T  30833086 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 30832987  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||| |||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  30832986 gatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 30832921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 12647788 - 12647968
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  |||||||||||||||||||| || |||||||||||||||||||  |||| |||||||||||    |||| || | |||||||||||      
T  12647788 gtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggcat 12647887  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    |  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12647888 cc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 12647968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 32289328 - 32289148
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||| | |||||||| | || ||||||||  |||| |||| ||||||||||  |    
T  32289328 gtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaaccagctcacggcatc 32289229  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
       ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  32289228 acaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 32289148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 6266453 - 6266274
Alignment:
Q  18 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccact 117  Q
    |||||||||  || |||||||||| ||||||   ||||||||||||||||||||  |||| | |||||||||||  |||| |||| ||||||||||  |     
T  6266453 tccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 6266354  T
Q  118 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
     ||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6266353 cgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaaatttgaagacaaatctcaaca 6266274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 40739292 - 40739457
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   ||| ||||||| ||| | |||||||| | |||||||||||  |||| |||| ||||||||||      ||||||||||||    
T  40739292 acttaacgagcaagtttgaaaattgtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcac 40739391  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  40739392 gatgccaaattcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaaatctcaaca 40739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 44310558 - 44310483
Alignment:
Q  109 acggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44310558 acggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 44310483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 19344820 - 19345010
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| || ||| | |||| | |    
T  19344820 aggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttgg 19344919  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||  |   ||||| |||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  19344920 ctcacgg-catctccgatcgtatcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 19345010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 183
Target Start/End: Original strand, 19349678 - 19349854
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  19349678 aggttgaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttgg 19349777  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 183  Q
    ||||||| ||  |   |||||||||||||  | |||| | | ||||||| | ||||||||||| ||||||||||||||    
T  19349778 ctcacgg-catctccgatcgtgtcacgattgccaaattgcgacacgattcctctgttcttccaaaccacaaatttgaa 19349854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 32247276 - 32247356
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 201  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||    
T  32247276 aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag-ccaatatcaacaataa 32247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 32247184 - 32247244
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattt 67  Q
    ||||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  32247184 aggttgaccagtctttatcagtgatacttaacgagcaagtttctgaatcgtgccacgattt 32247244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 28258729 - 28258668
Alignment:
Q  137 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||| ||||| |||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaacaa 28258668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 8389681 - 8389636
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 8389636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 36757477 - 36757430
Alignment:
Q  137 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaag 36757430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 33528155 - 33528093
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 201  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||| ||| |  |||||||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattaacaacaataa 33528093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 10706783 - 10706738
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaag 10706738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 21630511 - 21630556
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaag 21630556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 39483443 - 39483488
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||| ||||| ||||||||||| |||||||||||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaag 39483488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 33118696 - 33118752
Alignment:
Q  143 cgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
    |||||||||||||| || |||| ||| | ||||||||||||||||||| ||||||||    
T  33118696 cgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaatttcaacaat 33118752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 20522794 - 20522833
Alignment:
Q  145 tgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaag 20522833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 23078002 - 23077957
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||| || |||||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaag 23077957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 28258815 - 28258734
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggc 113  Q
    ||||||| |||||||||   ||||||||||||||||| ||| || | ||||||||||| |  |||| |||| ||||||||||    
T  28258815 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctcacggc 28258734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 41390991 - 41391178
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||    
T  41390991 gaccccaggttgaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 41391090  T
Q  101 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
    ||| |||||||| ||  | ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  41391091 actggctcacgg-catctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaa 41391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 39445893 - 39446070
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| |||| | |    
T  39445893 aggttgaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttgg 39445992  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||| ||  | ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39445993 ctcacgg-catctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 39446070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 20622641 - 20622821
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||  ||||||||||||||||||||  |||| | |||||||||||  |||| | |||||||||||||  |    
T  20622641 gtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcacc 20622740  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20622741 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 20622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 1054703 - 1054526
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | |    
T  1054703 aggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttgg 1054604  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||| ||| |  |||||| ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  1054603 ctcacgg-cacctccaatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaag 1054526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 44023566 - 44023389
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| | |    
T  44023566 aggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttgg 44023467  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||| ||| |  |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44023466 ctcacgg-cacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 44023389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 34 - 197
Target Start/End: Complemental strand, 19365931 - 19365768
Alignment:
Q  34 ttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcacga 133  Q
    |||||||||||||||   |||||||||||||||||||||||||| | |||||||||||  |||| |||| ||||||||||  |   ||||||||||||||    
T  19365931 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacga 19365832  T
Q  134 tgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  19365831 tgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagtcaaatctcaaca 19365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24793843 - 24793709
Alignment:
Q  1 gacccaaggtt-gacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaa 99  Q
    ||||||||||| |||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  24793843 gacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgca 24793744  T
Q  100 aactagctcacggccacttgaaatcgtgtcacgat 134  Q
    ||||||||||||||  || ||||||||||||||||    
T  24793743 aactagctcacggcacctcgaaatcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 25439588 - 25439411
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||| || ||||| |||| | |    
T  25439588 aggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttgg 25439489  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||| ||  | |||||||||||||||  | |||||||||||||||| | |||||||||||||||||||||||||||    
T  25439488 ctcacgg-catctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaag 25439411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 44203397 - 44203217
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||||| || | |||| |||||||||||    |||| || | ||||||||||| |    
T  44203397 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacggc-a 44203299  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    | |  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44203298 cctccaatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 44203217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 51765170 - 51764988
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||| | |||||||| | |||||||||||  |||| |||| ||||||||||  |    
T  51765170 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 51765071  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
      ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  51765070 acgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaaatctcaacaat 51764988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 9986950 - 9986785
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   ||||||||||||||||||||| |||| | |||||||||||   ||| | || ||||||||||  |  |||||||||| ||    
T  9986950 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcacactgcagaccagctcacggcaccacgaaatcgtgttac 9986851  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9986850 gatgtcaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9986785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 19361077 - 19360912
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    |||||||||||||||||   |||||||||||||||||||||||||| | |||||||||||  |||| |||| ||||||||||  |   ||||||||||||    
T  19361077 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 19360978  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||| ||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  19360977 gataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 19360912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 40282139 - 40281958
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggcca 115  Q
    ||||||||||  || ||||||||||||||||| |  |||||||||||||||| |||  |||| | |||||||||||  |||| || ||||||||||||      
T  40282139 gtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacctagctcacggcac 40282040  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |   ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40282039 cactaaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatctcaaca 40281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 9036182 - 9036003
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||  ||| || | | ||||| || ||  |||| || ||||||||||||  |    
T  9036182 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctagctcacggcacc 9036083  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9036082 ccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 184
Target Start/End: Complemental strand, 25444781 - 25444604
Alignment:
Q  7 aggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tag 105  Q
    ||||||||  ||||||||||| |||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||| || ||||  |||| | |    
T  25444781 aggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttgg 25444682  T
Q  106 ctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||| ||  | |||||||||||||||  | |||||||||||||||| | |||||||||||||||||||||||||||    
T  25444681 ctcacgg-catctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaag 25444604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 21053720 - 21053540
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggcca 115  Q
    ||||||||||  || ||||||||||||||||| |  ||||||||||||||||||||  |||| | |||||||||||  | || |  ||||||||| ||      
T  21053720 gtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccttgcattctagctcactgcac 21053621  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21053620 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 24787021 - 24786908
Alignment:
Q  1 gacccaaggtt-gacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaa 99  Q
    ||||||||||| |||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  24787021 gacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgca 24786922  T
Q  100 aactagctcacggc 113  Q
    ||||||||||||||    
T  24786921 aactagctcacggc 24786908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 41398646 - 41398778
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||| ||||||||  |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  41398646 gaccccaggttgaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 41398745  T
Q  101 actagctcacggccacttgaaatcgtgtcacgat 134  Q
    ||| |||||||| ||  | |||||||||||||||    
T  41398746 actggctcacgg-catctcaaatcgtgtcacgat 41398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 24202367 - 24202251
Alignment:
Q  81 cacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    |||||||||||  |||| |||| ||||||||||  |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24202367 cacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaattt 24202268  T
Q  181 gaagacaaatctcaaca 197  Q
    |||| ||||||||||||    
T  24202267 gaagccaaatctcaaca 24202251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 13604172 - 13604095
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||| |||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  13604172 aaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctcaaca 13604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 43988128 - 43987947
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||| || ||| | |||| | |||||| |||     
T  43988128 gtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattttgcttccagcaaacttggctcactgcct 43988029  T
Q  116 ct-tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    || ||  |||||||||||||  | |||||| | ||||||| | ||| ||| ||| ||||||||||||||| ||| | |||||||    
T  43988028 ctctg--atcgtgtcacgattgccaaatcgcgacacgattcctctgctctcccaaaccacaaatttgaagccaattttcaacaa 43987947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 21536189 - 21536119
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 190  Q
    ||||||||||||| ||   |||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  21536189 aaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 21536119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 24793723 - 24793678
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24793678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 3282273 - 3282335
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 201  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||| ||||| ||||||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaacaataa 3282335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 41398764 - 41398814
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 189  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaa 41398814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 13598967 - 13599012
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 13599012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 26644450 - 26644390
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    ||||||||| |||||| ||||||||| |||||||| | ||||||||||| |||||||||||    
T  26644450 aaatcgtgttacgatgacaaaatcgtatcacgattcctctgttcttccaaaccacaaattt 26644390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 37070334 - 37070378
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 183  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaa 37070378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 16124238 - 16124197
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 180  Q
    ||||||| |||||||||| ||||||||||| |||||||||||    
T  16124238 aaatcgtatcacgatttctctgttcttccaaaccacaaattt 16124197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 1192328 - 1192296
Alignment:
Q  119 gaaatcgtgtcacgatgccaaaatcgtgtcacg 151  Q
    ||||||||||||||||||||||||||| |||||    
T  1192328 gaaatcgtgtcacgatgccaaaatcgtatcacg 1192296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 20762393 - 20762337
Alignment:
Q  52 aatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctc 108  Q
    ||||||||||||||||||||| |||| | ||||||| | || ||||||||| |||||    
T  20762393 aatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaccagctc 20762337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 22119 - 21939
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||  |    
T  22119 gtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacc 22020  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    | |||||||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  22019 tcgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 8097 - 8230
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||    
T  8097 gacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaa 8196  T
Q  101 actagctcacggccacttgaaatcgtgtcacgat 134  Q
    ||||||||||||||||||||||||||||||||||    
T  8197 actagctcacggccacttgaaatcgtgtcacgat 8230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 8216 - 8261
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 8261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 17610 - 17430
Alignment:
Q  18 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccact 117  Q
    |||||||||  ||||||||||||||||||||   |||| ||||||||||||||||||||| | |||||||||||  |||| |||| ||||||||||  |     
T  17610 tccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatca 17511  T
Q  118 tgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
     |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  17510 cgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacaa 17430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 201
Target Start/End: Original strand, 11574 - 11757
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||||||||| |||| | |||||||||||  |||| |||| ||||||||||  |    
T  11574 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 11672  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 201  Q
     ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  11673 atgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaagccaaatctcaacaataa 11757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 9129 - 9308
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccac 116  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||||||||| |||  | |||||||||||  |||| |||| ||||||||||  |    
T  9129 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcatgtcacgatttggcaccctgcaaaccagctcacggcatc 9227  T
Q  117 ttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  9228 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 9308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 184
Target Start/End: Original strand, 753 - 933
Alignment:
Q  4 ccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac- 102  Q
    |||| ||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | ||||     
T  753 ccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaact 852  T
Q  103 tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    | |||||||| ||| |  |||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  853 tggctcacgg-cacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaag 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 4131 - 4310
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||||    |||| || | ||||||||||| |    
T  4131 gtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggc-a 4229  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    | | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4230 cctaaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 3006 - 3185
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcca 115  Q
    ||||||||||   |||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||||    |||| || | |||||||||||      
T  3006 gtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacggcat 3105  T
Q  116 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3106 cc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 176645 - 176462
Alignment:
Q  1 gacccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaa 100  Q
    ||||||| ||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | ||    
T  176645 gacccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaa 176546  T
Q  101 ac-tagctcacggcc-acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    || |||||||| |||  | ||  ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  176545 acttagctcactgcctccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 176462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 1932 - 1751
Alignment:
Q  3 cccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac 102  Q
    ||||||||||||  ||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | ||||    
T  1932 cccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaac 1833  T
Q  103 -tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | |||||| ||| |     |||||||||||||  | |||||||| ||||||| | ||||||||||| ||||| |||||||||    
T  1832 ttggctcactgcctc-cccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaag 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 13963 - 13796
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc- 114  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | |||| |||||||| |||     
T  13963 gtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcactgcct 13864  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | ||  ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  13863 ccctg--atcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 13796  T

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Target: scaffold0197; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 18839 - 18663
Alignment:
Q  21 ttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggccacttg 119  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||| || ||| | |||| |||||||| ||| | |     
T  18839 ttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctc-tc 18741  T
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
      |||||||||||||  | |||||| | ||||||| | ||||||| ||| ||||||||||||||| ||| | ||||||    
T  18740 cgatcgtgtcacgattgccaaatcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 18663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 184
Target Start/End: Complemental strand, 148637 - 148456
Alignment:
Q  3 cccaaggttgacaggtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaac 102  Q
    ||||||||||||  ||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||| | ||||    
T  148637 cccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaac 148538  T
Q  103 -tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
     | |||||| ||| |     |||||||||||||  | |||||||| ||||||| | ||||||||||| ||||| |||||||||    
T  148537 ttggctcactgcctc-cccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaag 148456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 6039 - 5859
Alignment:
Q  17 gtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttc-ccaagatcgggccacgatttggcgtcctgaaaac-tagctcacggcc 114  Q
    ||||||||||  |||||||||||||||||||||   |||||||||||||||  |||  |||| | ||||| || ||  |||| || | |||||||||||     
T  6039 gtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaatttgcaccctgcaaccctagctcacggc- 5941  T
Q  115 acttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    || |  |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5940 acctccaatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 5859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 7988 - 7911
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  7988 aaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 647 - 523
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    ||||||||||||| |||   ||||||||||||||| | |||||||| | |||||||||||  |||| |||||||||||||||  |  |||||||||||||    
T  647 acttaacgagcaaatttgaaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcac 548  T
Q  132 gatgccaaaatcgtgtcacgatttc 156  Q
    ||||||||| |||||||||||||||    
T  547 gatgccaaattcgtgtcacgatttc 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 132829 - 132752
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    |||||||| |||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  132829 aaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctcaaca 132752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 6252 - 6297
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 6297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 3060 - 3105
Alignment:
Q  139 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaag 3105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 1784 - 1721
Alignment:
Q  121 aatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 184  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 1160 - 1083
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 197  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| || ||||||||||||||| ||||| ||||||    
T  1160 aaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 43599 - 43441
Alignment:
Q  32 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgggccacgatttggcgtcctgaaaactagctcacggccacttgaaatcgtgtcac 131  Q
    ||||||| |||||||||   |||| |||||||||||| ||| ||||  |||||||||| |  |||| |||| |||||||| |      ||||||||||||    
T  43599 acttaaccagcaagtttgaaaatcatgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcacgacattacaaaatcgtgtcac 43500  T
Q  132 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 190  Q
    ||||||| ||||||||||||||||| || |||||||| |||| |||||||||| |||||    
T  43499 gatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaaat 43441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 36384 - 36322
Alignment:
Q  137 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 199  Q
    ||||||||| ||| |||||| ||||||||||| ||||||||||||||| ||| | ||||||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaattttcaacaat 36322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 45744 - 45805
Alignment:
Q  137 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 198  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 45805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 6784 - 6750
Alignment:
Q  120 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 154  Q
    |||||||| ||||||||||||||||||||||||||    
T  6784 aaatcgtgccacgatgccaaaatcgtgtcacgatt 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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