View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6876A_low_205 (Length: 254)
Name: NF6876A_low_205
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6876A_low_205 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 55080097 - 55079883
Alignment:
| Q |
1 |
ttataaggaagtaattgatttgtacagtgaaatgttgcgggaaggaatcaaacctgatggaatttcatttctgacaataatctcagcttgtggtcacact |
100 |
Q |
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| T |
55080097 |
ttataaggaagtaattgatttgtacagtgaaatgttgcgggaaggaatcaaacctgatggaatttcatttctgacaataatctcagcttgtggtcacact |
55079998 |
T |
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| Q |
101 |
ggacaagtagatgctggtgtgaagtattttgaatctatgactaatgatttcaagttggatcctggtccagagcattatagctgcttggttgatttacttt |
200 |
Q |
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| T |
55079997 |
ggacaagtagatgctggtgtgaagtattttgaatctatgactaatgatttcaagttggatcctggtccagagcattatagctgcttggttgatttacttt |
55079898 |
T |
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| Q |
201 |
gtagggctggagaat |
215 |
Q |
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| T |
55079897 |
gtagggctggagaat |
55079883 |
T |
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