View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6876A_low_290 (Length: 243)

Name: NF6876A_low_290
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6876A_low_290
NF6876A_low_290
[»] chr2 (35 HSPs)
chr2 (20-243)||(35449365-35449589)
chr2 (143-212)||(21782832-21782901)
chr2 (147-220)||(37411250-37411323)
chr2 (143-218)||(21616738-21616813)
chr2 (143-221)||(18276497-18276575)
chr2 (123-221)||(30404855-30404953)
chr2 (154-221)||(23718013-23718080)
chr2 (154-221)||(24105685-24105752)
chr2 (140-221)||(18420439-18420520)
chr2 (157-221)||(39279665-39279729)
chr2 (154-221)||(896198-896265)
chr2 (154-221)||(30527600-30527667)
chr2 (167-221)||(44860320-44860374)
chr2 (154-219)||(31808064-31808129)
chr2 (123-212)||(36409641-36409730)
chr2 (164-216)||(28677906-28677958)
chr2 (143-191)||(29663985-29664033)
chr2 (154-221)||(31284035-31284103)
chr2 (173-221)||(34691810-34691858)
chr2 (173-221)||(34714222-34714270)
chr2 (174-221)||(5367199-5367246)
chr2 (124-190)||(12224177-12224244)
chr2 (154-221)||(20242732-20242799)
chr2 (140-183)||(21624239-21624282)
chr2 (146-220)||(20473301-20473375)
chr2 (143-221)||(20539679-20539757)
chr2 (143-212)||(4332902-4332971)
chr2 (124-221)||(18841018-18841115)
chr2 (165-202)||(27084260-27084297)
chr2 (140-193)||(31727830-31727883)
chr2 (180-221)||(38355892-38355933)
chr2 (123-183)||(6290113-6290173)
chr2 (173-221)||(18889596-18889644)
chr2 (145-221)||(36756349-36756425)
chr2 (165-221)||(42832281-42832337)
[»] chr7 (44 HSPs)
chr7 (125-221)||(15902780-15902876)
chr7 (147-221)||(20549771-20549845)
chr7 (143-221)||(26329387-26329465)
chr7 (162-219)||(5548671-5548728)
chr7 (154-219)||(32308107-32308172)
chr7 (142-221)||(22602715-22602794)
chr7 (139-221)||(3721066-3721147)
chr7 (140-221)||(7328696-7328777)
chr7 (154-219)||(22868029-22868094)
chr7 (145-221)||(7438684-7438760)
chr7 (154-221)||(9482921-9482988)
chr7 (123-221)||(19206005-19206104)
chr7 (146-221)||(22484004-22484079)
chr7 (154-220)||(6630918-6630984)
chr7 (143-221)||(26733280-26733358)
chr7 (143-221)||(27945017-27945095)
chr7 (140-221)||(1433427-1433508)
chr7 (143-203)||(11722121-11722181)
chr7 (164-212)||(29787383-29787431)
chr7 (143-214)||(5235962-5236033)
chr7 (154-221)||(5835234-5835301)
chr7 (123-205)||(12289069-12289152)
chr7 (158-221)||(24339633-24339696)
chr7 (143-206)||(30731013-30731076)
chr7 (143-221)||(2425738-2425816)
chr7 (147-221)||(3520347-3520421)
chr7 (167-217)||(16341496-16341546)
chr7 (173-219)||(17851437-17851483)
chr7 (145-219)||(18013081-18013155)
chr7 (167-221)||(19992001-19992055)
chr7 (154-216)||(23191883-23191945)
chr7 (137-191)||(24105648-24105702)
chr7 (154-220)||(43249980-43250046)
chr7 (143-221)||(49107797-49107874)
chr7 (156-221)||(2948672-2948737)
chr7 (158-211)||(25481893-25481946)
chr7 (175-243)||(27732221-27732290)
chr7 (143-211)||(32094035-32094104)
chr7 (141-214)||(48246825-48246898)
chr7 (168-220)||(12278836-12278888)
chr7 (165-221)||(24146814-24146870)
chr7 (165-221)||(27093418-27093474)
chr7 (165-221)||(27184827-27184883)
chr7 (143-211)||(30813788-30813856)
[»] chr3 (42 HSPs)
chr3 (124-243)||(26492182-26492307)
chr3 (143-221)||(8383233-8383311)
chr3 (143-221)||(25093478-25093556)
chr3 (158-235)||(32804529-32804608)
chr3 (165-218)||(11313808-11313861)
chr3 (124-221)||(26508067-26508164)
chr3 (165-221)||(7928448-7928504)
chr3 (154-218)||(25948895-25948959)
chr3 (158-221)||(8039840-8039903)
chr3 (125-221)||(8789555-8789652)
chr3 (142-221)||(28678278-28678357)
chr3 (153-211)||(4987306-4987364)
chr3 (143-221)||(11665920-11665998)
chr3 (124-206)||(14979138-14979220)
chr3 (143-213)||(30994895-30994965)
chr3 (128-206)||(10954911-10954991)
chr3 (143-220)||(11658791-11658868)
chr3 (154-211)||(21479105-21479162)
chr3 (143-220)||(24205047-24205124)
chr3 (143-218)||(2731790-2731863)
chr3 (167-215)||(9624641-9624689)
chr3 (143-195)||(12674532-12674584)
chr3 (143-202)||(5441055-5441114)
chr3 (154-193)||(6525713-6525752)
chr3 (143-218)||(10455766-10455841)
chr3 (143-221)||(9800016-9800094)
chr3 (167-221)||(10690267-10690321)
chr3 (140-206)||(16000036-16000102)
chr3 (143-221)||(28917977-28918055)
chr3 (174-220)||(29508451-29508497)
chr3 (173-219)||(49505161-49505207)
chr3 (159-221)||(49651791-49651853)
chr3 (140-221)||(4990972-4991053)
chr3 (167-212)||(11251978-11252023)
chr3 (159-216)||(12703999-12704056)
chr3 (165-218)||(16192758-16192811)
chr3 (167-212)||(27277852-27277897)
chr3 (167-220)||(34307786-34307839)
chr3 (168-221)||(45451554-45451607)
chr3 (143-211)||(15796309-15796377)
chr3 (153-221)||(20691305-20691373)
chr3 (154-202)||(40052319-40052367)
[»] chr6 (52 HSPs)
chr6 (154-221)||(7996383-7996450)
chr6 (154-221)||(8022351-8022418)
chr6 (164-221)||(21924940-21924997)
chr6 (154-221)||(7265598-7265665)
chr6 (158-221)||(13364710-13364773)
chr6 (156-219)||(19040341-19040404)
chr6 (153-220)||(26562675-26562742)
chr6 (143-221)||(7086771-7086849)
chr6 (167-221)||(9025499-9025553)
chr6 (143-221)||(9027154-9027232)
chr6 (143-221)||(9658855-9658933)
chr6 (141-220)||(13851710-13851789)
chr6 (126-221)||(16833267-16833362)
chr6 (154-221)||(19044451-19044518)
chr6 (123-221)||(34073352-34073451)
chr6 (140-213)||(3398592-3398664)
chr6 (124-221)||(10770679-10770776)
chr6 (143-188)||(18803549-18803594)
chr6 (147-212)||(34290091-34290156)
chr6 (140-217)||(1532211-1532290)
chr6 (154-221)||(5732515-5732582)
chr6 (154-221)||(7938103-7938170)
chr6 (158-221)||(9629374-9629437)
chr6 (154-221)||(16766684-16766751)
chr6 (158-221)||(20371115-20371178)
chr6 (158-221)||(33001294-33001357)
chr6 (143-221)||(9107375-9107453)
chr6 (148-193)||(677818-677863)
chr6 (143-212)||(8805586-8805655)
chr6 (143-219)||(10339132-10339209)
chr6 (168-221)||(30866149-30866202)
chr6 (140-220)||(1681731-1681811)
chr6 (165-221)||(7377977-7378033)
chr6 (143-211)||(8776988-8777056)
chr6 (143-211)||(12696300-12696368)
chr6 (155-219)||(17341671-17341735)
chr6 (125-191)||(20370515-20370585)
chr6 (154-221)||(7723255-7723322)
chr6 (166-221)||(9195759-9195814)
chr6 (175-221)||(9617442-9617488)
chr6 (143-221)||(10294083-10294161)
chr6 (154-220)||(10842519-10842585)
chr6 (143-221)||(13360377-13360455)
chr6 (164-221)||(30851599-30851654)
chr6 (147-221)||(31959139-31959213)
chr6 (143-221)||(34595110-34595188)
chr6 (156-221)||(7977835-7977900)
chr6 (179-220)||(11591876-11591917)
chr6 (154-211)||(17841604-17841661)
chr6 (164-220)||(8931608-8931664)
chr6 (137-221)||(32320674-32320758)
chr6 (145-193)||(32839679-32839727)
[»] chr5 (43 HSPs)
chr5 (154-221)||(3966490-3966557)
chr5 (124-221)||(28588679-28588775)
chr5 (140-221)||(16203800-16203881)
chr5 (143-221)||(21191061-21191139)
chr5 (126-221)||(11685898-11685993)
chr5 (147-219)||(27144443-27144515)
chr5 (143-193)||(26716120-26716170)
chr5 (143-193)||(26985860-26985910)
chr5 (167-220)||(41091263-41091316)
chr5 (167-218)||(6471897-6471948)
chr5 (154-221)||(26312756-26312823)
chr5 (167-221)||(18421846-18421900)
chr5 (154-219)||(12264836-12264901)
chr5 (168-221)||(30502393-30502446)
chr5 (168-221)||(30542736-30542789)
chr5 (154-211)||(43001787-43001844)
chr5 (124-221)||(2436878-2436976)
chr5 (157-221)||(23220973-23221037)
chr5 (166-218)||(39205879-39205931)
chr5 (154-221)||(6035470-6035536)
chr5 (154-221)||(6247609-6247676)
chr5 (154-221)||(14674256-14674323)
chr5 (143-218)||(15410456-15410531)
chr5 (124-220)||(21576751-21576849)
chr5 (124-211)||(41633692-41633779)
chr5 (145-191)||(5873548-5873594)
chr5 (140-206)||(19552563-19552629)
chr5 (143-193)||(19820427-19820477)
chr5 (143-221)||(24906306-24906384)
chr5 (154-220)||(31084310-31084376)
chr5 (145-207)||(40000554-40000616)
chr5 (140-221)||(22423817-22423898)
chr5 (172-221)||(23012413-23012462)
chr5 (165-218)||(32766951-32767004)
chr5 (159-220)||(34879342-34879403)
chr5 (168-221)||(36838544-36838597)
chr5 (140-221)||(37328849-37328930)
chr5 (149-218)||(38749571-38749640)
chr5 (154-211)||(39698528-39698585)
chr5 (143-211)||(6326312-6326380)
chr5 (143-211)||(21522726-21522794)
chr5 (143-211)||(21533292-21533360)
chr5 (156-192)||(38816729-38816765)
[»] chr1 (59 HSPs)
chr1 (124-221)||(36878417-36878515)
chr1 (123-218)||(27471574-27471669)
chr1 (143-221)||(9709796-9709874)
chr1 (148-218)||(19562629-19562699)
chr1 (155-240)||(31015031-31015116)
chr1 (143-219)||(398772-398848)
chr1 (124-211)||(14359537-14359623)
chr1 (143-221)||(10572594-10572672)
chr1 (140-190)||(13011252-13011302)
chr1 (154-220)||(17831537-17831603)
chr1 (167-221)||(40181871-40181925)
chr1 (165-221)||(1864885-1864941)
chr1 (154-206)||(2896141-2896193)
chr1 (154-218)||(6427337-6427401)
chr1 (143-219)||(7918218-7918294)
chr1 (154-206)||(15641050-15641102)
chr1 (165-221)||(38503318-38503374)
chr1 (143-202)||(1262860-1262919)
chr1 (166-217)||(19324561-19324612)
chr1 (159-218)||(25098563-25098622)
chr1 (159-217)||(12443469-12443527)
chr1 (164-218)||(13436455-13436509)
chr1 (124-221)||(19058861-19058959)
chr1 (154-212)||(25452162-25452220)
chr1 (156-221)||(1486714-1486779)
chr1 (143-221)||(5944257-5944337)
chr1 (124-221)||(9629905-9630002)
chr1 (124-221)||(28273093-28273190)
chr1 (124-221)||(48450592-48450689)
chr1 (154-190)||(3490426-3490462)
chr1 (142-214)||(16927197-16927269)
chr1 (125-221)||(23636054-23636150)
chr1 (177-221)||(44482240-44482284)
chr1 (123-221)||(51409980-51410079)
chr1 (143-222)||(10577739-10577818)
chr1 (154-221)||(13997870-13997937)
chr1 (166-221)||(20157355-20157410)
chr1 (164-219)||(25361883-25361938)
chr1 (154-221)||(37598819-37598885)
chr1 (166-221)||(38075975-38076030)
chr1 (154-221)||(46348388-46348455)
chr1 (157-211)||(113289-113343)
chr1 (143-221)||(5376505-5376583)
chr1 (159-221)||(9828036-9828098)
chr1 (159-221)||(14332647-14332709)
chr1 (145-219)||(17754289-17754363)
chr1 (147-189)||(20999588-20999630)
chr1 (143-213)||(34298412-34298482)
chr1 (167-221)||(34371714-34371767)
chr1 (169-219)||(34712390-34712440)
chr1 (124-211)||(35702603-35702691)
chr1 (147-221)||(38078666-38078740)
chr1 (143-221)||(41877475-41877553)
chr1 (174-219)||(10233260-10233305)
chr1 (158-207)||(10474996-10475045)
chr1 (125-218)||(36905955-36906048)
chr1 (164-221)||(39953151-39953208)
chr1 (143-191)||(609493-609541)
chr1 (159-219)||(30847727-30847787)
[»] chr8 (38 HSPs)
chr8 (154-221)||(13844601-13844668)
chr8 (125-216)||(29775994-29776085)
chr8 (145-219)||(24362209-24362283)
chr8 (159-221)||(31236582-31236644)
chr8 (125-221)||(20873027-20873123)
chr8 (166-221)||(12606834-12606889)
chr8 (159-221)||(27213539-27213601)
chr8 (166-220)||(34897084-34897138)
chr8 (164-221)||(11927091-11927148)
chr8 (154-219)||(31109525-31109590)
chr8 (143-211)||(4673440-4673508)
chr8 (142-218)||(11803234-11803310)
chr8 (154-221)||(4786343-4786410)
chr8 (167-218)||(14731712-14731763)
chr8 (154-221)||(20679400-20679467)
chr8 (154-217)||(39954288-39954351)
chr8 (143-221)||(29510309-29510387)
chr8 (164-221)||(11944662-11944719)
chr8 (154-211)||(36450769-36450826)
chr8 (165-221)||(4611532-4611588)
chr8 (141-221)||(28384999-28385079)
chr8 (172-219)||(3025556-3025603)
chr8 (174-221)||(14134706-14134753)
chr8 (154-221)||(15816134-15816201)
chr8 (123-211)||(22595949-22596038)
chr8 (143-202)||(22651952-22652011)
chr8 (143-221)||(926793-926871)
chr8 (143-221)||(24669409-24669487)
chr8 (154-212)||(37283824-37283882)
chr8 (167-221)||(40332191-40332245)
chr8 (154-220)||(44067503-44067569)
chr8 (164-221)||(7658460-7658517)
chr8 (167-220)||(12570514-12570567)
chr8 (153-206)||(41831960-41832013)
chr8 (154-202)||(13436988-13437036)
chr8 (167-207)||(18067953-18067993)
chr8 (124-191)||(27067333-27067403)
chr8 (142-218)||(36934645-36934721)
[»] chr4 (35 HSPs)
chr4 (158-233)||(40613441-40613516)
chr4 (123-221)||(21945458-21945557)
chr4 (166-221)||(26504304-26504359)
chr4 (143-219)||(14126118-14126194)
chr4 (154-218)||(15029752-15029816)
chr4 (154-218)||(36635311-36635375)
chr4 (143-206)||(28720852-28720914)
chr4 (143-193)||(5832727-5832777)
chr4 (154-219)||(35723391-35723457)
chr4 (123-214)||(21539879-21539976)
chr4 (167-212)||(56257933-56257978)
chr4 (143-211)||(3947781-3947849)
chr4 (165-213)||(8423731-8423779)
chr4 (164-220)||(13134447-13134503)
chr4 (143-191)||(16402246-16402294)
chr4 (166-217)||(22440609-22440660)
chr4 (139-190)||(31638068-31638119)
chr4 (123-221)||(49430981-49431080)
chr4 (154-216)||(903909-903971)
chr4 (175-221)||(5775363-5775409)
chr4 (147-216)||(7970501-7970568)
chr4 (168-218)||(15659768-15659818)
chr4 (143-221)||(23292991-23293069)
chr4 (168-221)||(16189710-16189763)
chr4 (153-206)||(20743298-20743351)
chr4 (159-220)||(24343499-24343560)
chr4 (159-216)||(35952627-35952684)
chr4 (143-191)||(847927-847975)
chr4 (167-219)||(3712516-3712568)
chr4 (165-221)||(9996838-9996894)
chr4 (137-193)||(12628618-12628674)
chr4 (125-221)||(12797343-12797438)
chr4 (154-190)||(17345451-17345487)
chr4 (170-218)||(18576045-18576093)
chr4 (143-211)||(19482644-19482712)
[»] scaffold0020 (1 HSPs)
scaffold0020 (140-221)||(135317-135398)
[»] scaffold0008 (1 HSPs)
scaffold0008 (145-219)||(263379-263453)
[»] scaffold0652 (1 HSPs)
scaffold0652 (140-221)||(467-548)
[»] scaffold0085 (1 HSPs)
scaffold0085 (123-220)||(26348-26446)
[»] scaffold0036 (1 HSPs)
scaffold0036 (154-221)||(9752-9819)
[»] scaffold0168 (1 HSPs)
scaffold0168 (143-221)||(21019-21097)
[»] scaffold0123 (1 HSPs)
scaffold0123 (167-221)||(44530-44584)
[»] scaffold0103 (1 HSPs)
scaffold0103 (154-211)||(51798-51855)
[»] scaffold0022 (1 HSPs)
scaffold0022 (143-220)||(90819-90896)
[»] scaffold0004 (1 HSPs)
scaffold0004 (154-211)||(92794-92851)
[»] scaffold0223 (1 HSPs)
scaffold0223 (143-211)||(20148-20216)
[»] scaffold0044 (1 HSPs)
scaffold0044 (157-221)||(53170-53234)
[»] scaffold0306 (1 HSPs)
scaffold0306 (154-205)||(13387-13438)
[»] scaffold0152 (1 HSPs)
scaffold0152 (154-205)||(21889-21940)
[»] scaffold0003 (1 HSPs)
scaffold0003 (123-221)||(241549-241648)
[»] scaffold1528 (1 HSPs)
scaffold1528 (145-219)||(1013-1087)
[»] scaffold0053 (1 HSPs)
scaffold0053 (143-193)||(8774-8824)
[»] scaffold0050 (1 HSPs)
scaffold0050 (128-221)||(70238-70332)
[»] scaffold0007 (1 HSPs)
scaffold0007 (143-220)||(225274-225351)
[»] scaffold0110 (1 HSPs)
scaffold0110 (153-221)||(28836-28904)
[»] scaffold0027 (1 HSPs)
scaffold0027 (143-211)||(46658-46726)


Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 243
Target Start/End: Original strand, 35449365 - 35449589
Alignment:
Q  20 acaatcaatctaactctcttcttaattgggcttacttctgccaaggaaaggtacctatattcttcaaccttc-aactatttccattcataatgcttactt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35449365 acaatcaatctaactctcttcttaattgggcttacttctgccaaggaaaggtacctatattcttcaaccttccaactatttccattcataatgcttactt 35449464  T
Q  119 tacttctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  35449465 tacttctatgaagcacgaatacgaacacgacacaaacactgacaagccaacactgttaataatttgagaaaatcacagaattcagtgtaattatatgtgt 35449564  T
Q  219 cgggcacgacacatgtctgacacca 243  Q
    | | ||||||||||||| |||||||    
T  35449565 cagacacgacacatgtccgacacca 35449589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 21782901 - 21782832
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| |||||    
T  21782901 acacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 37411323 - 37411250
Alignment:
Q  147 gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||| || ||||||||||||||| ||||||||||||||||||||| | |||||||||| |||||||||||||    
T  37411323 gacacagacgctgacatgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 21616738 - 21616813
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||||||||  |||| |||| |||||||| ||||||||||||||||||||| | |||||||||| |||||||||||    
T  21616738 acacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 18276497 - 18276575
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| ||| ||||||| |||||||||| |||||||||||||||||||||   |||||||||| ||||| ||||||||    
T  18276497 acacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcgg 18276575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 30404953 - 30404855
Alignment:
Q  123 tctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||| ||||| ||| |||||  ||||||||| |||||||| | ||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  30404953 tctatgaagcacggatacggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 30404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 23718013 - 23718080
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||| ||||||||||||||||| ||| | |||||||||| ||||||||||||||    
T  23718013 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcgg 23718080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 24105685 - 24105752
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||| ||||||||||||||||| ||| | |||||||||| ||||||||||||||    
T  24105685 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcgg 24105752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 18420520 - 18420439
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| ||| | ||||||| ||| |||||||||||||||||||||||||| | |||||| ||  |||||| |||||||    
T  18420520 cgaacacgagacatatactgacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcgg 18420439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 39279665 - 39279729
Alignment:
Q  157 ctgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| ||| |||| | ||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  39279665 ctgacacgccaacaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcgg 39279729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 896198 - 896265
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| |||||||||||||||| ||||||||||||| | | |||| ||| || |||||||||||    
T  896198 acactgacacgccgacactgctaatagtttgagaaaatcacatatttcaatgtaatcatatgtgtcgg 896265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 30527667 - 30527600
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  || |||||| ||||||||||||||||||| | |||| ||||| ||||||||||||||    
T  30527667 acactgacacacccacactgttaataatttgagaaaatcatataatttagtgtaattatatgtgtcgg 30527600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 44860320 - 44860374
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| ||||||||||||||||||||  | |||||||||| ||||||||||||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcgg 44860374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 31808064 - 31808129
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||||  ||||||| ||||||||||| | ||||||| | |||||||||| ||||||||||||    
T  31808064 acactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 36409730 - 36409641
Alignment:
Q  123 tctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    ||||||||||||| ||||  |||||||||  | ||| |||||||||||| ||| ||||||||| ||||||| | |||| ||||| |||||    
T  36409730 tctatgaagcacggatacagacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcacataatttagtgtaattat 36409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 28677906 - 28677958
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgt 216  Q
    |||||||| ||||||||||||| ||||||| | |||||||||| |||||||||    
T  28677906 gccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 29663985 - 29664033
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaat 191  Q
    |||||||||| ||||||||||| ||||| |||||||||||||| |||||    
T  29663985 acacgacacagacactgacatgtcgacagtgctaataatttgaaaaaat 29664033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 31284035 - 31284103
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta-tatgtgtcgg 221  Q
    ||||| ||| |||||||||||||||||||||||||||||| | ||| || ||| |||| ||||||||||    
T  31284035 acacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaattattatgtgtcgg 31284103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 34691858 - 34691810
Alignment:
Q  173 gctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||| ||||||| | |||||||||| ||||||||||||||    
T  34691858 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcgg 34691810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 34714270 - 34714222
Alignment:
Q  173 gctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||| ||||||| | |||||||||| ||||||||||||||    
T  34714270 gctaataatttgataaaatcatataattcagtgtaattatatgtgtcgg 34714222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 5367199 - 5367246
Alignment:
Q  174 ctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||| |||||| | |||||||||| ||||||||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcgg 5367246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 12224177 - 12224244
Alignment:
Q  124 ctatgaagcacgaatac-gaacacgacacaaacactgacatgccgacactgctaataatttgagaaaa 190  Q
    |||||||||||| |||| |||||||||||||||| ||||| ||| |||  ||||||||||||| ||||    
T  12224177 ctatgaagcacggataccgaacacgacacaaacattgacacgccaacatagctaataatttgaaaaaa 12224244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 20242799 - 20242732
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| ||||||||  |||||  ||| ||||||||| | |||||||||| ||||||||||||||    
T  20242799 acactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcgg 20242732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 21624239 - 21624282
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataattt 183  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||    
T  21624239 cgaacacgacacagacactgacacgccgacacagctaataattt 21624282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 20473301 - 20473375
Alignment:
Q  146 cgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||||| ||||||||||||||||||  |||||||||| | ||| ||| | |||||||||| |||| | ||||||    
T  20473301 cgacacagacactgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcg 20473375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 20539757 - 20539679
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||||| | |||||| ||||||||||||| ||||||| | |||| ||||| |||| | |||||||    
T  20539757 acacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcgg 20539679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 4332902 - 4332971
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    ||||| |||| | ||| |||||||||||||| |||||||||| |||||||| | |||||| ||| |||||    
T  4332902 acacggcacagatacttacatgccgacactgataataatttgggaaaatcacataattcaatgtaattat 4332971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 18841115 - 18841018
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||| ||||| ||||||||   ||||||||| || |||||  |||||||||||| ||||| | | |||| ||||| |||| | |||||||    
T  18841115 ctatgaagcacgtatacggacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcgg 18841018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 27084260 - 27084297
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattca 202  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  27084260 ccgacactgctaataatttgagaaaatcatataattca 27084297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 31727830 - 31727883
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatca 193  Q
    |||||| |||||| | ||||||| || |||||| ||||||||||||||||||||    
T  31727830 cgaacatgacacagatactgacacgctgacactactaataatttgagaaaatca 31727883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 38355933 - 38355892
Alignment:
Q  180 atttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||| | |||||||||| ||||||||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcgg 38355892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 6290113 - 6290173
Alignment:
Q  123 tctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataattt 183  Q
    ||||||||||||||||||  ||||||||| ||||||| || | || ||| |||||||||||    
T  6290113 tctatgaagcacgaatacagacacgacacgaacactggcacgtcggcaccgctaataattt 6290173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 18889644 - 18889596
Alignment:
Q  173 gctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||| |||||||||||| | |||||||||| || |||||||||||    
T  18889644 gctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcgg 18889596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 36756425 - 36756349
Alignment:
Q  145 acgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||| ||||||||| | ||||||  ||||||||||||  |||| | | |||||||||| |||||| |||||||    
T  36756425 acgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcgg 36756349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 42832337 - 42832281
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| ||||||||||||||||||| | | | |||||||| |||||| |||||||    
T  42832337 ccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcgg 42832281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 15902780 - 15902876
Alignment:
Q  125 tatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||   ||||||||||| ||||||| | |||| ||||| ||||||||||||||    
T  15902780 tatgaagcacgaatacggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcgg 15902876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 20549771 - 20549845
Alignment:
Q  147 gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| |||||||||  ||||||| |||||||||||||||||||||   |||||||||| ||||||||||||||    
T  20549771 gacacatacactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcgg 20549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 26329465 - 26329387
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| ||||||||| |||||||  | |||||||||||||||| || | |||||||||| ||||||||||||||    
T  26329465 acacgacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcgg 26329387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 5548671 - 5548728
Alignment:
Q  162 atgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  5548671 atgccgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtc 5548728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 32308107 - 32308172
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||||| |||||||| ||||||||||||||||||||| | |||||||||| ||| ||||||||    
T  32308107 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtc 32308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 22602794 - 22602715
Alignment:
Q  142 aacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||  |||||||| |||||||| |  ||| |||||||||||||| | |||||||||| ||||||||||||||    
T  22602794 aacacgacacaggcactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcgg 22602715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 3721066 - 3721147
Alignment:
Q  139 acgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||  ||||||||||  ||||| |||||||||||||||||||||| | |||| ||| | ||||||||||||||    
T  3721066 acgaacacgacacggacactgacatttcgaca-tgctaataatttgagaaaatcacataatttagtataattatatgtgtcgg 3721147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 7328777 - 7328696
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||| ||| | ||| | ||| |||||||||||||||||||||| | | |||| ||||| ||||||||||||||    
T  7328777 cgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcgg 7328696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 22868029 - 22868094
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||||| ||||||||  |||||||| ||||||||||| | |||||||||| ||||||||||||    
T  22868029 acactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 7438684 - 7438760
Alignment:
Q  145 acgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| |||||||||||||||||||| | ||||||||||| ||||||| | |||||| ||| |||| | |||||||    
T  7438684 acgacataaacactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgg 7438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 9482921 - 9482988
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||  ||| ||||||||||||||||| | |||||||||| ||||||||||||||    
T  9482921 acactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtgtcgg 9482988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 19206005 - 19206104
Alignment:
Q  123 tctatgaagcacgaatacga-acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| ||||||| |||| | |||||||||  ||||  ||| |||||||| ||||||||||||||||||||| | |||||| | | ||||||||||||||    
T  19206005 tctattaagcacggataccagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcgg 19206104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 22484004 - 22484079
Alignment:
Q  146 cgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| ||||||||| |||||||| ||||||||||| |||||||   | |||||||| | ||||||||||||||    
T  22484004 cgacacagacactgacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcgg 22484079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 6630984 - 6630918
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||||||| ||||||||  |||||||||||||||| |||   |||||||||| |||||||||||||    
T  6630984 acactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcg 6630918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 26733280 - 26733358
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||||| | |||||| ||||||||||||| ||||||| | |||||||| | |||| |||||||||    
T  26733280 acacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcgg 26733358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 27945017 - 27945095
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||||| ||||||||  |||||||||||||||||| | | |||||||||| |||| | |||||||    
T  27945017 acacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcgg 27945095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 1433427 - 1433508
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||  ||| ||||| |||||||| | ||||||||||||||||||| |  |||  |||| ||||||||||||||    
T  1433427 cgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcgg 1433508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 11722181 - 11722121
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcag 203  Q
    |||||||||  ||||||||| |||||||| ||||| ||||||||||||||| | |||||||    
T  11722181 acacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 29787431 - 29787383
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    |||||||| ||||||||||||||||||||| | |||||||||| |||||    
T  29787431 gccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 5235962 - 5236033
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatat 214  Q
    |||||||||| ||||||||| | |||||| ||||||||||| ||||||| | | |||| ||||| |||||||    
T  5235962 acacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 5835234 - 5835301
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| | ||||||||  |||||| ||||||||||| | | |||||||||| ||||||||||||||    
T  5835234 acactgatacgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcgg 5835301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 12289069 - 12289152
Alignment:
Q  123 tctatgaagcacgaatacgaacacgacacaaacactgacatgccgac-actgctaataatttgagaaaatcaaagaattcagtg 205  Q
    ||||||||||||| ||||  |||| ||||  |||| |||| |||| | |||||||||||||||||||||||| | |||||||||    
T  12289069 tctatgaagcacggatacagacacaacacggacaccgacacgccggccactgctaataatttgagaaaatcacataattcagtg 12289152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 24339633 - 24339696
Alignment:
Q  158 tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| |||||||| ||||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  24339633 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 24339696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 30731013 - 30731076
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgt 206  Q
    |||||||||| ||| || || |||||||| || |||||||||||||||||| | ||||||||||    
T  30731013 acacgacacatacagtggcacgccgacaccgcgaataatttgagaaaatcacataattcagtgt 30731076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 2425816 - 2425738
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| | ||||||| |||| ||| | ||||||||||||||||||| | |||| ||||  | ||||||||||||    
T  2425816 acacgacacagatactgacacgccggcaccgttaataatttgagaaaatcacataattaagtggaactatatgtgtcgg 2425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 3520421 - 3520347
Alignment:
Q  147 gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| ||| ||||| || ||||| | |||| |||||||||||||| | |||||| ||| ||||||||||||||    
T  3520421 gacacagacattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcgg 3520347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 16341496 - 16341546
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtg 217  Q
    ||||||| ||||||||||||||||||| | |||| ||||| ||||||||||    
T  16341496 gacactgataataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 17851437 - 17851483
Alignment:
Q  173 gctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  17851437 gctaataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 18013155 - 18013081
Alignment:
Q  145 acgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||  |||||||||| | |||||| |||||||||| | ||||| | | |||||||||| ||||||||||||    
T  18013155 acgacacggacactgacattctgacactactaataatttaaaaaaattacataattcagtgtaattatatgtgtc 18013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 19992001 - 19992055
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| ||||||||||||||||||||| | | |||||||| |||||| |||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcgg 19992055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 23191883 - 23191945
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgt 216  Q
    ||||||| | |||||||| ||||||||||||||||||||| | | |||||||| |||| ||||    
T  23191883 acactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 24105648 - 24105702
Alignment:
Q  137 atacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaat 191  Q
    ||||| |||||||||  ||||||||| |||||||| ||||||||||||| |||||    
T  24105648 atacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 43249980 - 43250046
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||||||| |||||||| | ||||||||||||||||| | | ||| |||||| |||||| ||||||    
T  43249980 acactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 43250046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 49107797 - 49107874
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  || ||||||  ||||||| |||||||||||||||||| || | |||| ||||| ||||||||||||||    
T  49107797 acacgacacggactctgacacaccgacaccgctaataatttgagaaaa-cacataattgagtgtgattatatgtgtcgg 49107874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 2948672 - 2948737
Alignment:
Q  156 actgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| |||||||| ||| ||||||| |||||||||   |||| ||||| ||||||||||||||    
T  2948672 actgacacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcgg 2948737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 25481893 - 25481946
Alignment:
Q  158 tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    ||||| |||||||| ||||||||||||| ||||||| | |||||||||| ||||    
T  25481893 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 27732290 - 27732221
Alignment:
Q  175 taataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg-gcacgacacatgtctgacacca 243  Q
    ||||||||| ||||||| | | |||||||||| ||||||||||||||  ||||||| ||||| |||||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatgtgtcggtacacgacatatgtccgacacca 27732221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 32094104 - 32094035
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttg-agaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||||||||| ||||||| ||||  ||||||||||| | ||||||| | |||||||||| ||||    
T  32094104 acacgacacaaacactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaatta 32094035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 48246898 - 48246825
Alignment:
Q  141 gaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatat 214  Q
    |||||||||||| ||| ||||| | |||||||| || |||||||||||||||| | || ||| ||| |||||||    
T  48246898 gaacacgacacagacaatgacacgtcgacactgttattaatttgagaaaatcacacaactcaatgtaattatat 48246825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 12278836 - 12278888
Alignment:
Q  168 acactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||| ||||||||| ||||||| | | |||||||||| |||||||||||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattatatgtgtcg 12278888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 24146814 - 24146870
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| |||||||||||| ||||||||| | |||||| | | ||||||||||||||    
T  24146814 ccgacaatgctaataattttagaaaatcacataattcaatataattatatgtgtcgg 24146870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 27093474 - 27093418
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| ||||||||||| ||||||||| | |||| ||||| |||||||| |||||    
T  27093474 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcgg 27093418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 27184827 - 27184883
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| ||||||||||| ||||||||| | |||| ||||| |||||||| |||||    
T  27184827 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcgg 27184883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 30813788 - 30813856
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||| ||| ||||||| |  |||||| |||||||||||||||||||| | | |||||||||| ||||    
T  30813788 acacgagacagacactgatactccgacattgctaataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 243
Target Start/End: Complemental strand, 26492307 - 26492182
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta----tat--gtg 217  Q
    |||||||||||||||||| |||||||||  ||||||||| |||||||  ||||||||||||| ||||||| | |||||||||| ||||    |||  |||    
T  26492307 ctatgaagcacgaatacggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtg 26492208  T
Q  218 tcgggcacgacacatgtctgacacca 243  Q
    |||| |||||||||||||||||||||    
T  26492207 tcggacacgacacatgtctgacacca 26492182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 8383233 - 8383311
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||| ||||| |||||||| ||||||||||||||||||||| | |||||||||| |||||| |||||||    
T  8383233 acacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcgg 8383311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 25093478 - 25093556
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||| ||| |||||||||| |||| |||||||||||||| | |||||||||| ||||||||||||||    
T  25093478 acacgacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcgg 25093556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 32804608 - 32804529
Alignment:
Q  158 tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtg--tcgggcacgacacatgtc 235  Q
    |||||||||||||| | ||||||||||||||||||| | |||| ||||| ||||||||||  |||| |||||||||||||    
T  32804608 tgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtctcggacacgacacatgtc 32804529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 11313861 - 11313808
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||||||||||||||||||||||||| | |||| ||||| |||||||||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 26508067 - 26508164
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||| ||| ||||| |||||| ||| | ||||||| || ||||| ||||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  26508067 ctatgaagaacggatacggacacgatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 26508164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 7928448 - 7928504
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| ||||||||||||| ||||||| | |||||||||| ||||||||||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcgg 7928504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 25948959 - 25948895
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||||||||||| || ||||||||||||| ||||||| | |||||||||| |||||| ||||    
T  25948959 acactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 8039903 - 8039840
Alignment:
Q  158 tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| ||| |||| ||||||||||||||||||| | | |||||||||| ||||||||||||||    
T  8039903 tgacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcgg 8039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 8789652 - 8789555
Alignment:
Q  125 tatgaagcacgaatacgaacac--gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||| ||||| ||||  ||||||| ||| ||||  ||||||| ||| ||||||||||||||||| | ||||| |||| ||||||||||||||    
T  8789652 tatgaagcacggatacggacaccggacacaa-cacagacacaccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcgg 8789555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 28678278 - 28678357
Alignment:
Q  142 aacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| | |||||||||||||||| ||||||||||||| | ||||||| | |||| ||| | ||| ||||||||||    
T  28678278 aacacgacatagacactgacatgccgacgctgctaataatttaataaaatcacataatttagtataattgtatgtgtcgg 28678357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 4987364 - 4987306
Alignment:
Q  153 aacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||| |||||||| ||||||||||||| ||||||| | |||||||||| ||||    
T  4987364 aacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 11665920 - 11665998
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| ||||| |||  ||||||  ||||||||||||| ||||||| | |||| ||||| ||||||||||||||    
T  11665920 acacgacacacacactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcgg 11665998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 14979138 - 14979220
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgt 206  Q
    |||||||||||| ||||| ||||||||   ||| || || |||||||| ||||||||||||| ||||||| | ||||||||||    
T  14979138 ctatgaagcacggatacggacacgacaaggacaatggcacgccgacacagctaataatttgaaaaaatcacataattcagtgt 14979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 30994965 - 30994895
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattata 213  Q
    |||||||||||||| ||||| |   |||||||||||||||| ||||||||| | |||||||||| ||||||    
T  30994965 acacgacacaaacattgacacgttcacactgctaataatttaagaaaatcacacaattcagtgtaattata 30994895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 10954911 - 10954991
Alignment:
Q  128 gaagcacgaatacgaacac--gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgt 206  Q
    |||||||| ||||| ||||  ||||| |||||||||| ||||||||  |||||||||||| ||||||| | ||||||||||    
T  10954911 gaagcacggatacggacaccggacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgt 10954991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 11658791 - 11658868
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||||| |||||||||  || |||  | ||||||||||||||||||  | |||||||||| |||||||||||||    
T  11658791 acacgacacagacactgacacaccaacatcgttaataatttgagaaaatcgcataattcagtgtgattatatgtgtcg 11658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 21479105 - 21479162
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    ||||||||| |||||||| ||||||||||||| ||||||| | |||||||||| ||||    
T  21479105 acactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaatta 21479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 24205124 - 24205047
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||||  ||||||||| |||||||| | ||||||||||||||||| | | ||| |||||| |||||| ||||||    
T  24205124 acacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 2731790 - 2731863
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||||||||| ||||||||||||||| |||  ||||| ||| ||||||||| | |||| ||||| |||||||||||    
T  2731790 acacgacacatacactgacatgccgatact--taatactttaagaaaatcacataattaagtgtaattatatgtgt 2731863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 9624641 - 9624689
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatg 215  Q
    ||||||||||||||||||||||||||| | |||||| ||| ||||||||    
T  9624641 gacactgctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 12674584 - 12674532
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaa 195  Q
    |||||||||  ||| |||||  |||||||||||||||||||||||||||||||    
T  12674584 acacgacacggacattgacacaccgacactgctaataatttgagaaaatcaaa 12674532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 5441114 - 5441055
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattca 202  Q
    |||||||||| ||||||||| |||| ||| ||||| ||||||||||||||| | ||||||    
T  5441114 acacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcacataattca 5441055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 6525752 - 6525713
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatca 193  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  6525752 acactgacatgtcgacaccgctaataatttgagaaaatca 6525713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 10455766 - 10455841
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||||||  || ||||| ||| |||||||||||||| ||||||||||| | || | ||||| |||||||||||    
T  10455766 acacgacacaggcattgacacgccaacactgctaataatatgagaaaatcatataactaagtgtaattatatgtgt 10455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 9800016 - 9800094
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||||| ||||||||  |||||||||||||||||| | | ||||| |||| ||| || |||||||    
T  9800016 acacgacacgtacactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcgg 9800094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 10690321 - 10690267
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| ||||||||| ||||||||||| | |||||||||| ||||||| ||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcgg 10690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 16000102 - 16000036
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgt 206  Q
    ||||||||||||| ||||||||| ||||||||  |||||||||| | ||||| | | ||||||||||    
T  16000102 cgaacacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgt 16000036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 28917977 - 28918055
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  | ||||||| |||||||  ||||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  28917977 acacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 28918055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 29508451 - 29508497
Alignment:
Q  174 ctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||||||| ||||||| | |||||||||| |||||||||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 49505207 - 49505161
Alignment:
Q  173 gctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||||||||||||||||| | |||| ||||| ||||||||||||    
T  49505207 gctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 49651853 - 49651791
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||| ||||||||||||| ||||||| | |||||| ||| |||| | |||||||    
T  49651853 gacatgccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcgg 49651791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 4991053 - 4990972
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||  | |||||||  ||||||| ||||||| ||||||||||| | | |||||||||| |||| | |||||||    
T  4991053 cgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcgg 4990972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 11251978 - 11252023
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    |||| |||||||||||||||||||||| | |||||||||| |||||    
T  11251978 gacattgctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 12703999 - 12704056
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgt 216  Q
    |||| ||||||||  ||||||||||||||||| || | |||||||||| |||||||||    
T  12703999 gacacgccgacaccactaataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 16192811 - 16192758
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||| | ||||||||||||||||| | | |||||||||| |||||||||||    
T  16192811 ccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 27277897 - 27277852
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    ||||||||||||||||||||||||||| | |||| ||||| |||||    
T  27277897 gacactgctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 34307839 - 34307786
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||| ||||||||||||||||||||| | | |||||||| |||||| ||||||    
T  34307839 gacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 45451554 - 45451607
Alignment:
Q  168 acactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||||||||||| | | |||||| | || |||||||||||    
T  45451554 acactgctaataatttgagaaaatcacatacttcagtataataatatgtgtcgg 45451607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 15796377 - 15796309
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||  ||| ||||| |||||||| | ||||||||||| ||||||| | |||||||||| ||||    
T  15796377 acacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaatta 15796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 20691305 - 20691373
Alignment:
Q  153 aacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| |  || |||| ||||||||||||||||| | | |||||||||| || |||||||||||    
T  20691305 aacactgacacgtagaaactgataataatttgagaaaatgacataattcagtgtaatcatatgtgtcgg 20691373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 40052319 - 40052367
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattca 202  Q
    ||||||||| |||||||| ||||||||||||| ||||||| | ||||||    
T  40052319 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 7996450 - 7996383
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| |||||    
T  7996450 acactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcgg 7996383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 8022351 - 8022418
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| |||||    
T  8022351 acactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcgg 8022418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 21924997 - 21924940
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  21924997 gccgacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcgg 21924940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 7265665 - 7265598
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| ||| |||| ||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  7265665 acactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgg 7265598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 13364773 - 13364710
Alignment:
Q  158 tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||| ||||||||||||||||| | |||||||||| || |||||||||||    
T  13364773 tgacatgccgacactgcttataatttgagaaaatcatataattcagtgtaatcatatgtgtcgg 13364710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 19040341 - 19040404
Alignment:
Q  156 actgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||| |||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 26562675 - 26562742
Alignment:
Q  153 aacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||| |||| |||||||||||||| ||||||||||||||| | |||||||||| |||||||||||||    
T  26562675 aacacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 7086771 - 7086849
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| |||| |||| | || ||||||||||||||||||||||||| | |||| ||||| ||||||||||||||    
T  7086771 acacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcgg 7086849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 9025553 - 9025499
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgg 9025499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 9027154 - 9027232
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||||| |||||||| ||||||||||||||| ||||| | ||||| |||| ||||||||||||||    
T  9027154 acacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcgg 9027232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 9658855 - 9658933
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||||| |||||||| ||||||||||| ||||||||| | |||||||||| ||||||| ||||||    
T  9658855 acacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcgg 9658933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 13851710 - 13851789
Alignment:
Q  141 gaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||||||  ||||||||| | |||||| ||||||||||||||||||| |   |||||||||| |||||||||||||    
T  13851710 gaacacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 16833267 - 16833362
Alignment:
Q  126 atgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||| |||||||||| ||||||||| ||||||||  |||||||||||| ||||||| | | |||||||| |||| | |||||||    
T  16833267 atgaagcactgatacggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcgg 16833362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 19044451 - 19044518
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| ||||||||  ||||||||||||||| |||| | |||||||||| ||||||||||||||    
T  19044451 acactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcgg 19044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 221
Target Start/End: Complemental strand, 34073451 - 34073352
Alignment:
Q  123 tctatgaagcacgaatac-gaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||| | || | |||||||||  ||||||||||||| |||  ||||||||||||||||||||  | |||||||||| |||||||| |||||    
T  34073451 tctatgaagcacggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcgg 34073352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 3398592 - 3398664
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattata 213  Q
    ||||||||||||  ||||||||| |||||||| ||||||||||||| ||||||| | |||||||||| ||||||    
T  3398592 cgaacacgacacggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattata 3398664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 10770776 - 10770679
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||| ||||| ||||||||   ||||||||| ||| ||||  |||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  10770776 ctatgaagcacggatacggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 10770679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 18803594 - 18803549
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaa 188  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  18803594 acacgacacaaacactgacatgccgacaccgctaataattcgagaa 18803549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 34290156 - 34290091
Alignment:
Q  147 gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    |||||||||||||||||||||||||  ||||||||||| || ||||| | |||||||||| |||||    
T  34290156 gacacaaacactgacatgccgacacaactaataatttgcgagaatcacataattcagtgtaattat 34290091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 1532211 - 1532290
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacact--gctaataatttgagaaaatcaaagaattcagtgtcattatatgtg 217  Q
    ||||||||||||||||||||||| | ||||||   ||||||||||||| ||||| | | |||||||||| ||||||||||    
T  1532211 cgaacacgacacaaacactgacacgtcgacacaccgctaataatttgataaaattacataattcagtgtaattatatgtg 1532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 5732582 - 5732515
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| |||||||| | ||||||||||||||||||| | | || ||||| ||||||||||||||    
T  5732582 acactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcgg 5732515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 7938103 - 7938170
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| |||||||| ||||||||||||| ||||||| | |||| ||||| |||||| |||||||    
T  7938103 acactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcgg 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 9629374 - 9629437
Alignment:
Q  158 tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| |||||||| || |||||||||||||||||| | |||||| ||| ||||||||||||||    
T  9629374 tgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 9629437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 16766684 - 16766751
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| |||||||| ||||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  16766684 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 16766751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 20371178 - 20371115
Alignment:
Q  158 tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| |||||||| ||||||||||||||||||||| | || ||| ||| ||||||||||||||    
T  20371178 tgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcgg 20371115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 33001357 - 33001294
Alignment:
Q  158 tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| |||||||||||||||||||||| ||||||| | |||| | ||| ||||||||||||||    
T  33001357 tgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcgg 33001294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 9107453 - 9107375
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||| ||| |||||||| ||||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  9107453 acacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcgg 9107375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 677818 - 677863
Alignment:
Q  148 acacaaacactgacatgccgacactgctaataatttgagaaaatca 193  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||||    
T  677818 acacagacactgacacgccgacactgttaataatttgagaaaatca 677863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 8805655 - 8805586
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    |||||||||| |||| |||| | || ||||||||||||||||||||||||| | |||| ||||| |||||    
T  8805655 acacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 10339209 - 10339132
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtg-tcattatatgtgtc 219  Q
    ||||||||  |||||||||| |||||||| || | |||||||||||||||| | ||||||||| | ||||||||||||    
T  10339209 acacgacatgaacactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgttaattatatgtgtc 10339132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 30866202 - 30866149
Alignment:
Q  168 acactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| ||||||||||||||||||||| | |||||| ||| ||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 1681731 - 1681811
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||||||||||| ||||| ||| ||||||||  |||||||||||| |||||||   |||||||||| |||| | ||||||    
T  1681731 cgaacacgacacatacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 7377977 - 7378033
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| ||||| ||||||||||||||| | |||||| ||| ||||||||||||||    
T  7377977 ccgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcgg 7378033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 8777056 - 8776988
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||  ||||||||| ||||||||  |||||||||||| ||||||| | |||||||||| ||||    
T  8777056 acacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatta 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 12696300 - 12696368
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||  ||||||||| |||||||| ||||||||||||| ||||| | | |||||||||| ||||    
T  12696300 acacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 12696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 17341735 - 17341671
Alignment:
Q  155 cactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||| |||||||| | ||||||||||| ||||||| | |||||||||| |||||| |||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 20370585 - 20370515
Alignment:
Q  125 tatgaagcacgaatacgaacacg-acacaa---acactgacatgccgacactgctaataatttgagaaaat 191  Q
    ||||||||||||||||| ||||| |||| |   |||| ||||||||||| |||||||||||||||||||||    
T  20370585 tatgaagcacgaatacggacacggacactatagacaccgacatgccgactctgctaataatttgagaaaat 20370515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 7723322 - 7723255
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| |  ||||||||||||||||||||||||||| | |||||||  | ||||||||| ||||    
T  7723322 acactgacacgtggacactgctaataatttgagaaaatcatataattcagcataattatatgtatcgg 7723255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 9195814 - 9195759
Alignment:
Q  166 cgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| |||||||||||||||||| | | |||| ||||| ||||||||||||||    
T  9195814 cgacactcctaataatttgagaaaatgacataatttagtgtaattatatgtgtcgg 9195759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 9617442 - 9617488
Alignment:
Q  175 taataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||||||||| | |||||| ||| ||||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 9617488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 10294083 - 10294161
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  | ||||||||||||| || ||||||||||||||| ||||  | | |||| ||| ||||||||||||||    
T  10294083 acacgacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcgg 10294161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 10842519 - 10842585
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||| |||| |||||||| ||||||||||||| ||||||| | |||| ||||| || ||||||||||    
T  10842519 acacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg 10842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 13360455 - 13360377
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| || ||||| |||| | ||||||  ||| |||||||||||||||| | |||||||||| ||||||||| ||||    
T  13360455 acacgatacgaacacagacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattatatgtttcgg 13360377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 30851599 - 30851654
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||||| ||||||||  | |||||| ||| ||||||||||||||    
T  30851599 gccgacactgctaataatttaagaaaatc--acaattcaatgtaattatatgtgtcgg 30851654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 31959139 - 31959213
Alignment:
Q  147 gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| |||||||||| |||| ||| ||||||||||||| ||||||| | ||| |||||| |||| | |||||||    
T  31959139 gacacgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 34595110 - 34595188
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||| ||||| ||||||||  |||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  34595110 acacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 34595188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 7977900 - 7977835
Alignment:
Q  156 actgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| |||||||| ||||||||||||| ||||| | | |||||||||| |||| | |||||||    
T  7977900 actgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgg 7977835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 11591917 - 11591876
Alignment:
Q  179 aatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||||||||||||| | |||||||||| |||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 17841661 - 17841604
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    ||||||||| |||||||| ||||||||||||| ||||||| | |||| ||||| ||||    
T  17841661 acactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 8931664 - 8931608
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||| ||||| ||||||||||||| | | |||||||| | |||||||||||||    
T  8931664 gccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcg 8931608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 32320758 - 32320674
Alignment:
Q  137 atacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| |||| |||| | |||||| | || ||||| | ||||||||||| ||||||| | |||||| ||||||||||||| ||||    
T  32320758 atacggacacaacacgagcactgatacgctgacaccgttaataatttgataaaatcacataattcaatgtcattatatgtatcgg 32320674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 32839727 - 32839679
Alignment:
Q  145 acgacacaaacactgacatgccgacactgctaataatttgagaaaatca 193  Q
    |||||||| |||  ||||||| ||||||| |||||||||||||||||||    
T  32839727 acgacacagacatcgacatgctgacactgttaataatttgagaaaatca 32839679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 3966490 - 3966557
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  3966490 acactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcgg 3966557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 28588775 - 28588679
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||| |||||||| || || ||||| |||||||| | ||||||||||||||||||| | |||||||||| |||||| |||||||    
T  28588775 ctatgaagcacgaatacggacacgacataa-cattgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcgg 28588679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 16203881 - 16203800
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| |||||  ||||| |||||||||||||||||||||||||||||||||  | |||| ||||| ||||||||||||||    
T  16203881 cgaacatgacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcgg 16203800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 21191139 - 21191061
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  |||||||||||||||||| ||||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  21191139 acacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 21191061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 11685898 - 11685993
Alignment:
Q  126 atgaagcacgaatacgaacacg-acacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| ||||| ||||| |||| | ||||||||||||||||| ||||||||||||||||| ||  | |||| ||||| ||||||||||||||    
T  11685898 atgaagcacggatacggacacggacacga-cactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcgg 11685993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 27144443 - 27144515
Alignment:
Q  147 gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||| ||||||||| |||||||| |||||||||||||| |||||| | |||| ||||| ||||||||||||    
T  27144443 gacacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 26716120 - 26716170
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatca 193  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||||    
T  26716120 acacgacatagacattgacatgccgacactgctaataatttgagaaaatca 26716170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 26985860 - 26985910
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatca 193  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||||    
T  26985860 acacgacatagacattgacatgccgacactgctaataatttgagaaaatca 26985910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 41091316 - 41091263
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||||||| |||||||||||||| | |||||||||| |||||||||||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcg 41091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 6471948 - 6471897
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||| ||||||||||||||||||||| | |||||||||| |||||||||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 26312756 - 26312823
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| ||||||| || || |||||||||||||||||||  |||||||||| ||||||||| ||||    
T  26312756 acactgatatgccgataccgcaaataatttgagaaaatcaattaattcagtgtaattatatgtatcgg 26312823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 18421900 - 18421846
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| ||||||||||||||||| | ||| |||||| ||||||||||||||    
T  18421900 gacactgctgataatttgagaaaatcacataatccagtgtaattatatgtgtcgg 18421846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 12264901 - 12264836
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||||||||| |||| |||||| |||||||||||| | |  ||||||||| ||||||||||||    
T  12264901 acactgacatgccaacaccgctaattatttgagaaaattacatgattcagtgtaattatatgtgtc 12264836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 30502446 - 30502393
Alignment:
Q  168 acactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| |||||||||||||||||||||   |||||||||| ||||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcgg 30502393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 30542789 - 30542736
Alignment:
Q  168 acactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| |||||||||||||||||||||   |||||||||| ||||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcgg 30542736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 43001787 - 43001844
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    ||||||||||| |||||||||||||||||||| ||||| | | |||||||||| ||||    
T  43001787 acactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaatta 43001844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 2436878 - 2436976
Alignment:
Q  124 ctatgaagcacgaatacgaacac--gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||| ||||| ||||  ||||| | |||||||| |||||||| ||||||||||||  ||||||| | |||||  ||| ||||||||||||||    
T  2436878 ctatgaagcacggatacggacaccggacacga-cactgacacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcgg 2436976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 23220973 - 23221037
Alignment:
Q  157 ctgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||| |||||| ||||||||||||| ||||||| | |||| ||||| || |||||||||||    
T  23220973 ctgacatgtcgacaccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcgg 23221037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 39205879 - 39205931
Alignment:
Q  166 cgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||||||||||||||||||||||||||| | ||||  |||| |||||||||||    
T  39205879 cgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgt 39205931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 6035470 - 6035536
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| |||||||| |||||||||||||| |||| | | |||||||||| ||||||| ||||||    
T  6035470 acactgacacgccgacaccgctaataatttgag-aaataatataattcagtgtaattatatttgtcgg 6035536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 6247609 - 6247676
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| ||||||||  |||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 6247676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 14674256 - 14674323
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| |||||||| ||||||||||||| ||||||| | |||| ||||| |||| | |||||||    
T  14674256 acactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 15410531 - 15410456
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||||||||  ||||||||| |||||||| ||||||||||| ||||||| | |  ||||||||| || ||||||||    
T  15410531 acacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgt 15410456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 21576849 - 21576751
Alignment:
Q  124 ctatgaagcacgaatacgaacac--gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||||||| ||||  ||||  ||||| |||||||| | ||| |||| ||||||||||||| ||||||| | |||||||||| |||| | ||||||    
T  21576849 ctatgaagcacggatacagacactggacacgaacactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 41633692 - 41633779
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    ||||||| |||||||||| |||| ||||| | |||||||  ||||||| ||||||||||||| ||| | | | |||||||||| ||||    
T  41633692 ctatgaaacacgaatacggacaccacacagatactgacactccgacacagctaataatttgaaaaatttacataattcagtgtaatta 41633779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 5873594 - 5873548
Alignment:
Q  145 acgacacaaacactgacatgccgacactgctaataatttgagaaaat 191  Q
    |||||||  ||||||||||||||||||  ||||||||||||||||||    
T  5873594 acgacacggacactgacatgccgacacctctaataatttgagaaaat 5873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 19552629 - 19552563
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgt 206  Q
    ||||||||||||  ||||||||| |||||||| | ||||||||||| ||||||| | |||| |||||    
T  19552629 cgaacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgt 19552563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 19820477 - 19820427
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatca 193  Q
    |||||||||  |||||||||  ||||||| |||||||||||||||||||||    
T  19820477 acacgacacggacactgacactccgacaccgctaataatttgagaaaatca 19820427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 24906384 - 24906306
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| |||||||||| ||| |||| | ||||||||||| ||||| | | |||||||||| |||| | |||||||    
T  24906384 acacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcgg 24906306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 31084310 - 31084376
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||||||| |||||||| ||||||||||||| ||||||| | |||||| ||| |||| | ||||||    
T  31084310 acactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 31084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 40000616 - 40000554
Alignment:
Q  145 acgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtc 207  Q
    |||||||  ||||||||||| |||||||  ||||||||||| ||||||| | |||||||||||    
T  40000616 acgacacggacactgacatgtcgacactcttaataatttgaaaaaatcacataattcagtgtc 40000554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 22423898 - 22423817
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||  | |||||||  | |||||| |||||||||||||||||||| | |||||| | | ||||||| ||||||    
T  22423898 cgaacacgacacggatactgacaccctgacactactaataatttgagaaaatcacataattcaatataattatatatgtcgg 22423817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 23012462 - 23012413
Alignment:
Q  172 tgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||||||| | |||| | ||| ||||||||||||||    
T  23012462 tgctaataatttgagaaaatcatataatttaatgtaattatatgtgtcgg 23012413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 32767004 - 32766951
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||| ||||||||||||||||||||  | |||||| ||| |||||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgt 32766951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 34879342 - 34879403
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||| |||| ||| ||||| ||||||||||||||| | |||||||||| || ||||||||||    
T  34879342 gacacgccggcaccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcg 34879403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 36838544 - 36838597
Alignment:
Q  168 acactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| ||||||||||||||||||| | | |||| ||||| ||||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcgg 36838597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 37328930 - 37328849
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||  ||||||| |  ||||||| || |||||||||  ||||||| | |||||||||| |||| |||||||||    
T  37328930 cgaacacgacacggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcgg 37328849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 38749640 - 38749571
Alignment:
Q  149 cacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||||| |||||| |||||| | ||||||||||| ||||| | | |||||| ||| |||||||||||    
T  38749640 cacaaacacggacatgtcgacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgt 38749571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 39698528 - 39698585
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    ||||||||| || ||||| ||||||||||||| ||||||| | |||||||||| ||||    
T  39698528 acactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 6326380 - 6326312
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||  ||||||||| |||||||  |||| |||||||||||||| | | |||||||||| ||||    
T  6326380 acacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaatta 6326312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 21522726 - 21522794
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||  ||||||||| |||||||| ||||||||||| | ||||| | | |||||||||| ||||    
T  21522726 acacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatta 21522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 21533292 - 21533360
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||  ||||||||| |||||||| ||||||||||| | ||||| | | |||||||||| ||||    
T  21533292 acacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatta 21533360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 38816765 - 38816729
Alignment:
Q  156 actgacatgccgacactgctaataatttgagaaaatc 192  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  38816765 actgacacgccgacaccgctaataatttgagaaaatc 38816729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 36878417 - 36878515
Alignment:
Q  124 ctatgaagcacgaatacgaacacg-acacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||| ||||| ||||| ||| | ||||||||| |||||||| ||||||||||||||||||||| | |||||||||| |||||| |||||||    
T  36878417 ctatgaagcacggatacggacacggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcgg 36878515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 27471669 - 27471574
Alignment:
Q  123 tctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||||||||  ||||| || |||||||||||||||||  |||| || |||||||||||||||||| || | |||||||||| |||| ||||||    
T  27471669 tctatgaagcacatatacggacgcgacacaaacactgacacaccgataccgctaataatttgagaaaagcacataattcagtgtaattacatgtgt 27471574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 9709796 - 9709874
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||||||||| |||| ||||||||||||||||||||| | |||||  ||| ||||||||||||||    
T  9709796 acacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcgg 9709874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 19562699 - 19562629
Alignment:
Q  148 acacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||| |||||||||| |||||||||||||||||||||||||||||  | | |||||||| |||||||||||    
T  19562699 acacgaacactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgt 19562629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 31015031 - 31015116
Alignment:
Q  155 cactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgggcacgacacatgtctgaca 240  Q
    |||||||  ||| |||| ||||||||||||||||||||| | |||||||||| |||| | ||||||| |||||||| |||||||||    
T  31015031 cactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcggacacgacacgtgtctgaca 31015116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 398848 - 398772
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||||  ||||||||| |||||||| ||||||||||||| ||||||| | |||||||||| |||||| |||||    
T  398848 acacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 14359623 - 14359537
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||||| ||||| |||||||||| |||| |||| |||||||| ||||||||||||| ||||||| | |||| ||||| ||||    
T  14359623 ctatgaagcacggatacggacacgacacagacacggacacgccgacacagctaataatttga-aaaatcacataatttagtgtaatta 14359537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 10572672 - 10572594
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||  |||||||||| ||||||||  |||||||||||||||||||| | ||||| |||| |||| |||||||||    
T  10572672 acacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcgg 10572594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 13011302 - 13011252
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaa 190  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  13011302 cgaacacgacacgaacactgacatgccgacacagctaataatttgaaaaaa 13011252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 17831603 - 17831537
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||||||| |||||||| ||||||||||||||||||||| |  ||||||||| || ||||||||||    
T  17831603 acactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 40181871 - 40181925
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||| ||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtatcgg 40181925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 1864941 - 1864885
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| | ||||||||||||||||||| | |||||||||| ||||||||||||||    
T  1864941 ccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcgg 1864885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 2896193 - 2896141
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgt 206  Q
    ||||||||| |||||||| ||||||||||||||||||||| | ||||||||||    
T  2896193 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgt 2896141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 6427337 - 6427401
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||||| ||| |||| ||||||||||||||||||||| | |||||| ||| |||||||||||    
T  6427337 acactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 7918294 - 7918218
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||||| ||| ||||| || ||||   |||||||||||||||||||| | |||||||||| ||||||||||||    
T  7918294 acacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 15641102 - 15641050
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgt 206  Q
    |||||||||||||||||||||||||||||| ||||||||| |  |||||||||    
T  15641102 acactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgt 15641050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 38503318 - 38503374
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| ||||||||||||||||||||| | | |||||||| ||||||||||||||    
T  38503318 ccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcgg 38503374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 1262860 - 1262919
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattca 202  Q
    ||||||||| ||||| |||| |||||||| ||||||||||||||||||||| | ||||||    
T  1262860 acacgacacgaacacggacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 19324561 - 19324612
Alignment:
Q  166 cgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtg 217  Q
    |||||||||| ||||||||||||||||| | |||||||||| ||||||||||    
T  19324561 cgacactgctgataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 25098622 - 25098563
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||| |||||||| ||| ||||||||||||||||| | |||||||||| |||||||||||    
T  25098622 gacaagccgacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 12443527 - 12443469
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtg 217  Q
    |||| |||||||| ||||||||||||||||||||| | |||||||||| ||| ||||||    
T  12443527 gacacgccgacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 13436455 - 13436509
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||||||||||||||||||| || |||||| | |||||||||| |||||||||||    
T  13436455 gccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgt 13436509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 19058959 - 19058861
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacac-tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||| ||||| |||||||||| |||| ||||| |||||||| ||||||||||| | || || | | |||||||||| |||| | |||||||    
T  19058959 ctatgaagcacggatacggacacgacacacacacttgacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcgg 19058861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 25452220 - 25452162
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    |||| |||||||| |||||||||||||||||||||||||  | |||||||||| |||||    
T  25452220 acaccgacatgccaacactgctaataatttgagaaaatctcataattcagtgtaattat 25452162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 1486779 - 1486714
Alignment:
Q  156 actgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| || ||||| ||||||||||||| ||||||| | |||||||||| |||||| |||||||    
T  1486779 actgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcgg 1486714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 5944257 - 5944337
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttg--agaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| ||||||||| |||| ||| ||||||||||||  | ||||||| | |||||||||| |||||| |||||||    
T  5944257 acacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcgg 5944337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 9630002 - 9629905
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||| |||||  |||||||   |||| ||||   |||||| ||||||||||||| ||||||| | |||||||||| |||||| |||||||    
T  9630002 ctatgaagcacggatacggccacgacatggacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcgg 9629905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 28273190 - 28273093
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||| ||||| ||| ||||   |||||||||||| |||||  ||||| |||||| ||||||| | |||||||||| |||| | |||||||    
T  28273190 ctatgaagcacggatacggacatgacaaggacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcgg 28273093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 48450689 - 48450592
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| | ||||| |||||||||  ||||||||| ||| |||| ||||||||||||| ||||| | | |||| ||||| |||| | |||||||    
T  48450689 ctatgaagcatggatacggacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 3490462 - 3490426
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaa 190  Q
    ||||||||| |||||||||||||||||||||||||||    
T  3490462 acactgacacgccgacactgctaataatttgagaaaa 3490426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 16927269 - 16927197
Alignment:
Q  142 aacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatat 214  Q
    ||||||||||| ||||||||| | || ||  ||||||||||||| ||||||| | |||||||||| |||||||    
T  16927269 aacacgacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattatat 16927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 23636150 - 23636054
Alignment:
Q  125 tatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||  ||||| |||||||||  ||| ||||| ||||| || || || ||||||||||||| | | |||||||||| ||| ||||||||||    
T  23636150 tatgaagcacagatacgcacacgacacggacattgacacgccgaaaccgccaaaaatttgagaaaattacataattcagtgtaattgtatgtgtcgg 23636054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 44482240 - 44482284
Alignment:
Q  177 ataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcgg 44482284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 51409980 - 51410079
Alignment:
Q  123 tctatgaagcacgaatacgaacacg-acacaaacactgacatgccgacactgctaataatttg-agaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||||||||||| ||||| ||||| ||||||| || |||||||||||||  ||||||||||| | ||||||| | |||||||||| |||| | ||||||    
T  51409980 tctatgaagcacggatacggacacggacacaaa-acggacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 51410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 10577818 - 10577739
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcggg 222  Q
    |||||||||  |||| |||| |||||||| ||||||  ||| ||||||||| | ||| |||||| |||||||||||||||    
T  10577818 acacgacacggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggg 10577739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 13997870 - 13997937
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| |||||||| | |||| |||| | ||||||| | |||||||||| ||||||||||||||    
T  13997870 acactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcgg 13997937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 20157410 - 20157355
Alignment:
Q  166 cgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| ||||||||| ||||||||||| | |||||||||| || |||||||||||    
T  20157410 cgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcgg 20157355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 25361883 - 25361938
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||||  || ||||||||||||||||| | |||||||||| ||||||||||||    
T  25361883 gccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtc 25361938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 37598819 - 37598885
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| ||||||||  |||||||||||| ||||||| | |||||||||| |||||| |||||||    
T  37598819 acactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcgg 37598885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 38076030 - 38075975
Alignment:
Q  166 cgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||||||||||| |||||| | || ||||||| || |||||||||||    
T  38076030 cgacactgctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcgg 38075975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 46348455 - 46348388
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| |||||||| ||||||||||||| ||||||| | |||| ||||| |||| | |||||||    
T  46348455 acactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcgg 46348388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 113289 - 113343
Alignment:
Q  157 ctgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||| |||||||| ||||||||||||| ||||||| | |||||||||| ||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 5376583 - 5376505
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||| ||| |||||||| ||||||||||| ||||||| | | |||||||||| |||| | |||||||    
T  5376583 acacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcgg 5376505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 9828036 - 9828098
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| ||||||||  |||||||||||| ||||||| | |||||||||| ||| ||||||||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcgg 9828098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 14332709 - 14332647
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||| ||||  |||||||||||||||||||| | |||| ||||| ||||||||| ||||    
T  14332709 gacatgcccacaccactaataatttgagaaaatcacataatttagtgtaattatatgtctcgg 14332647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 17754289 - 17754363
Alignment:
Q  145 acgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||| || ||||||  ||||||| ||||||||||||| ||||| | | |||||||||| | ||||||||||    
T  17754289 acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 17754363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 20999588 - 20999630
Alignment:
Q  147 gacacaaacactgacatgccgacactgctaataatttgagaaa 189  Q
    |||||||||||||| ||| |||||||| |||||||||||||||    
T  20999588 gacacaaacactgatatgtcgacactgataataatttgagaaa 20999630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 34298412 - 34298482
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattata 213  Q
    |||||||||  | |||||||  |||||||  |||||||||||||||||||| | |||||||||| ||||||    
T  34298412 acacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 34371714 - 34371767
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| |||||||||| |||||||||| | |||||||||| ||||||||||||||    
T  34371714 gacaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcgg 34371767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 34712440 - 34712390
Alignment:
Q  169 cactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||||||||||||||||||| | | |||| ||||| ||||||||||||    
T  34712440 cactgctaataatttgagaaaataacataatttagtgtaattatatgtgtc 34712390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 35702691 - 35702603
Alignment:
Q  124 ctatgaagcacgaatacgaacac--gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||||| ||||| ||||  ||||| | ||||||||||||||||| ||||||||||||| ||  ||||| |||| ||||| ||||    
T  35702691 ctatgaagcacggatacggacaccggacacga-cactgacatgccgacacagctaataatttgaaaacttcaaataattaagtgtaatta 35702603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 38078740 - 38078666
Alignment:
Q  147 gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| |||||||||| | |||||| ||||||||||||| ||||||| | |||||| ||| |||| | |||||||    
T  38078740 gacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgg 38078666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 41877553 - 41877475
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| ||||||  | |||||||| ||||||||||||||||||| | | |||| ||||| |||| | |||||||    
T  41877553 acacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcgg 41877475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 10233260 - 10233305
Alignment:
Q  174 ctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||| |||||||||||| | |||||||||| ||||||||||||    
T  10233260 ctaataaattgagaaaatcacataattcagtgtaattatatgtgtc 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 10475045 - 10474996
Alignment:
Q  158 tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtc 207  Q
    ||||| |||||||| |||||||| |||||||||||| | |||||||||||    
T  10475045 tgacacgccgacaccgctaataacttgagaaaatcacataattcagtgtc 10474996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 36905955 - 36906048
Alignment:
Q  125 tatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||||||||| |||||| ||| | ||   |||||||||  || |||| ||||||||| ||||||||||| | ||||||| || |||||||||||    
T  36905955 tatgaagcacaaatacggacatgtcaaggacactgacacaccaacaccgctaataatctgagaaaatcacataattcagagtaattatatgtgt 36906048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 39953208 - 39953151
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||| ||||||||||| ||||||||| | |||| ||||| ||| ||||||||||    
T  39953208 gccgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcgg 39953151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 609541 - 609493
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaat 191  Q
    ||||||||  |||||||||| ||||||||  ||||||||||||||||||    
T  609541 acacgacatcaacactgacacgccgacaccactaataatttgagaaaat 609493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 30847787 - 30847727
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||| ||||||||||||||||||| ||||| | | |||||| ||| || |||||||||    
T  30847787 gacatgctgacactgctaataatttgaaaaaatgacataattcaatgtaatcatatgtgtc 30847727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 13844668 - 13844601
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| |||| |||||||||||||||||||||||||||||| | |||| ||||| ||||||||||||||    
T  13844668 acacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcgg 13844601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 29775994 - 29776085
Alignment:
Q  125 tatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgt 216  Q
    |||||||||||||||||  ||||||||  ||| ||||| | ||||||||||||||||||||||||||||   |||||||| | |||||||||    
T  29775994 tatgaagcacgaatacggtcacgacacggacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagtataattatatgt 29776085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 24362283 - 24362209
Alignment:
Q  145 acgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||| |||| |||| |||||||| ||||||||||||||| ||||| | |||||||||| ||||||||||||    
T  24362283 acgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 31236644 - 31236582
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| |||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 31236582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 20873027 - 20873123
Alignment:
Q  125 tatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||  | ||||||||||| ||||||| | |||| ||||| |||| | |||||||    
T  20873027 tatgaagcacgaatacggacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 20873123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 12606889 - 12606834
Alignment:
Q  166 cgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||    
T  12606889 cgacactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcgg 12606834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 27213539 - 27213601
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| |||||||||||||||||||| ||||||||| | |||||| ||| ||||||||||||||    
T  27213539 gacacgccgacactgctaataatttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 34897084 - 34897138
Alignment:
Q  166 cgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||| ||||||||||||||||||||| | |||||||||| |||||||||||||    
T  34897084 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 11927148 - 11927091
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| ||||||||||| ||||||| | |||||||||| ||||||||||||||    
T  11927148 gccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcgg 11927091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 31109590 - 31109525
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||||||| |||||||| | ||||||||||||||||||||| |||||||| | | ||||||||||    
T  31109590 acactgacacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaactatatgtgtc 31109525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 4673508 - 4673440
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||| ||||||||| |||||||| | ||||||||||| ||||||| | |||||||||| ||||    
T  4673508 acacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaatta 4673440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 11803234 - 11803310
Alignment:
Q  142 aacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||||||||| |||||||| |  | ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  11803234 aacacgacacgaacactgatacactgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgt 11803310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 4786410 - 4786343
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| ||||||||   ||||||||| ||||||||| | |||||||||| ||||||||||||||    
T  4786410 acactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcgg 4786343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 14731712 - 14731763
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||||||||||||||||||||||| | |||| ||||| |||||||||||    
T  14731712 gacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 20679467 - 20679400
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||| ||||||  |||||||||||||||||||| | | |||||||| |||||| |||||||    
T  20679467 acactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcgg 20679400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 39954351 - 39954288
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtg 217  Q
    |||| |||| |||||||| ||||||||||||||||||||| | |||| ||||| ||||||||||    
T  39954351 acaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 29510387 - 29510309
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||||| |||||||| ||||||||||||| ||||||| | |||||||| | |||| | |||||||    
T  29510387 acacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcgg 29510309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 11944662 - 11944719
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| ||||||||||| ||||||| | || ||||||| ||||||||||||||    
T  11944662 gccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcgg 11944719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 36450826 - 36450769
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    ||||||||| ||||||||  |||||||||||| ||||||| |||||||||||| ||||    
T  36450826 acactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaatta 36450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 4611532 - 4611588
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||| ||||||||||||||||||| | | |||||||||| ||||||||| ||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcgg 4611588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 28385079 - 28384999
Alignment:
Q  141 gaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||  |||||||||| ||||||| | ||||||| |||  |||||  | |||||||||| ||||||||||||||    
T  28385079 gaacacgacacggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgtcgg 28384999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 3025556 - 3025603
Alignment:
Q  172 tgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||||||||||||||||| | |||||||||| |||||| |||||    
T  3025556 tgctaataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 14134706 - 14134753
Alignment:
Q  174 ctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||||| | |||||||||| ||||||| ||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcgg 14134753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 15816201 - 15816134
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||| ||||||||  |||||||||||| ||||||| | |||| ||||| |||||| |||||||    
T  15816201 acactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcgg 15816134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 22595949 - 22596038
Alignment:
Q  123 tctatgaagcacgaatacgaacac--gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    ||||||||||||| ||||| ||||  ||||||| |||||||| |||||||| ||||||||||| | ||||| | | |||||||||| ||||    
T  22595949 tctatgaagcacggatacggacaccggacacaa-cactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaatta 22596038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 22651952 - 22652011
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattca 202  Q
    |||||||||  ||||||||| |||||||| ||||||||||||| ||||||| | ||||||    
T  22651952 acacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattca 22652011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 926871 - 926793
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||||||||| ||| ||||| |||||||||||||||||||  |   |||||||| |||||| |||||||    
T  926871 acacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtcgg 926793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 24669409 - 24669487
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||| ||||||||| || ||||| | |||||||||||| |||| | | |||||||||| |||| | |||||||    
T  24669409 acacgacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcgg 24669487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 37283882 - 37283824
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    |||||||||||| | ||| ||||||||| ||||||||||| | |||||||||| |||||    
T  37283882 acactgacatgcgggcaccgctaataatctgagaaaatcacataattcagtgtaattat 37283824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 40332191 - 40332245
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||| |||||||||||||||||| | |||||||||| |||| | |||||||    
T  40332191 gacactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 40332245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 44067503 - 44067569
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||||||| |||||||| | ||||||||||||||||| | | ||| |||||| |||||| ||||||    
T  44067503 acactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 44067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 7658460 - 7658517
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||  |||||||||||||||||| | | |||||||||| ||||||| ||||||    
T  7658460 gccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgtcgg 7658517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 12570567 - 12570514
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    ||||||||||||||||| |||||| || | |||| ||||| |||||||||||||    
T  12570567 gacactgctaataatttaagaaaaacacataattaagtgtaattatatgtgtcg 12570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 41832013 - 41831960
Alignment:
Q  153 aacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgt 206  Q
    ||||| ||||||||||||| | ||||||||||| ||||||| | ||||||||||    
T  41832013 aacacagacatgccgacacagttaataatttgaaaaaatcacataattcagtgt 41831960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 13437036 - 13436988
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattca 202  Q
    ||||||||| |||||||| ||||||||||||| ||||||| | ||||||    
T  13437036 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 18067993 - 18067953
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtc 207  Q
    ||||| ||||||||||||||||||||| | |||||||||||    
T  18067993 gacaccgctaataatttgagaaaatcacataattcagtgtc 18067953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 27067403 - 27067333
Alignment:
Q  124 ctatgaagcacgaatacgaacacgacacaaacactgaca---tgccgacactgctaataatttgagaaaat 191  Q
    |||||||||||| ||||| ||||||||||  ||||||||   |||||||||  ||||| ||||||||||||    
T  27067403 ctatgaagcacggatacggacacgacacagtcactgacacactgccgacaccactaatgatttgagaaaat 27067333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 36934645 - 36934721
Alignment:
Q  142 aacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||||||  ||||| ||| | |||||| |||||||||| || ||||||| | |||||| ||| |||||||||||    
T  36934645 aacacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtgt 36934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 40613441 - 40613516
Alignment:
Q  158 tgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgggcacgacacatg 233  Q
    ||||| |||||||| ||||||| ||||||||||||| | |||||||||| |||||||||||||| ||| |||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcggacacaacacatg 40613516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 21945458 - 21945557
Alignment:
Q  123 tctatgaagcacgaatac-gaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||| | || | ||| |||||| |||||||||||||||||| ||||||||||||| ||||| | | |||||||||| |||| | |||||||    
T  21945458 tctatgaagcacggacaccggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcgg 21945557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 26504359 - 26504304
Alignment:
Q  166 cgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||    
T  26504359 cgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcgg 26504304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 14126194 - 14126118
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||||| ||||| ||| |||||||||| ||||||||||| ||| ||| | |||||||||| |||||| |||||    
T  14126194 acacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 15029752 - 15029816
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||||| || ||||||||||||||||||| || |||| | |||||||||| |||||||||||    
T  15029752 acactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatatgtgt 15029816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 36635311 - 36635375
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    ||||||||| ||| ||||  |||||||||||||||||||| | |||||||||| |||||||||||    
T  36635311 acactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 28720852 - 28720914
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgt 206  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||||| | ||| ||||||    
T  28720852 acacgacacgaacactgacatgccgacacagctaataatttga-aaaatcatataatgcagtgt 28720914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 5832777 - 5832727
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatca 193  Q
    |||||||||||||| | ||| | ||||||||||||||||||||||||||||    
T  5832777 acacgacacaaacattaacacgtcgacactgctaataatttgagaaaatca 5832727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 35723457 - 35723391
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaat-caaagaattcagtgtcattatatgtgtc 219  Q
    ||||||||| |||||||| ||||||||||||||||||| || | |||||| ||| ||||||||||||    
T  35723457 acactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtc 35723391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 21539976 - 21539879
Alignment:
Q  123 tctatgaagcacgaatacgaacacg-acacaa-----acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatat 214  Q
    ||||||||||||| ||||||||||| ||||||     ||||||||||||||||||   ||||||||| ||||||||| | |||| ||||| |||||||    
T  21539976 tctatgaagcacgtatacgaacacggacacaacatagacactgacatgccgacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 56257933 - 56257978
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattat 212  Q
    ||||||||||||||||||||||||||| | |||||||||| |||||    
T  56257933 gacactgctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 3947849 - 3947781
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||| ||||| |||| ||||||||||||| ||||||||||||| ||||||  | |||||||||| ||||    
T  3947849 acaccacacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaatta 3947781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 8423779 - 8423731
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattata 213  Q
    ||||||| ||||||||||||||||||||| | |||||||||| ||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 13134447 - 13134503
Alignment:
Q  164 gccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||||||| ||||||| ||||||||| | |||| ||||| |||||||||||||    
T  13134447 gccgacactgcttataatttaagaaaatcacataatttagtgtaattatatgtgtcg 13134503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 16402294 - 16402246
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaat 191  Q
    ||||||||  ||||||||||||||||||| | |||||||||||||||||    
T  16402294 acacgacatgaacactgacatgccgacacggataataatttgagaaaat 16402246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 22440660 - 22440609
Alignment:
Q  166 cgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtg 217  Q
    |||||| | ||||||||||||||||||| | |||||||||| ||||||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 31638119 - 31638068
Alignment:
Q  139 acgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaa 190  Q
    |||||||||||||||| ||||| ||||||||   ||||||||||||||||||    
T  31638119 acgaacacgacacaaatactgatatgccgacgacgctaataatttgagaaaa 31638068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 49430981 - 49431080
Alignment:
Q  123 tctatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttg-agaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||| | ||| ||||||| |  ||| ||||| |||||||| |||||||||||| | ||||||| | |||||||||| |||| | |||||||    
T  49430981 tctatgaagcacggacacggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcgg 49431080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 903909 - 903971
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgt 216  Q
    |||||||||  ||| ||| | ||||||||||||||||||| | |||||||||| |||||||||    
T  903909 acactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 5775409 - 5775363
Alignment:
Q  175 taataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||||||||| | |||| ||||| ||||||||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcgg 5775363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 7970501 - 7970568
Alignment:
Q  147 gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgt 216  Q
    |||||| |||||||||||| ||||| || ||||||  |||||||||| | |||||||||| |||||||||    
T  7970501 gacacagacactgacatgctgacaccgccaataat--gagaaaatcatataattcagtgtaattatatgt 7970568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 15659818 - 15659768
Alignment:
Q  168 acactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||||||||||||||||||||||||  | ||||| |||| |||||||||||    
T  15659818 acactgctaataatttgagaaaatctcataattcggtgtaattatatgtgt 15659768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 23293069 - 23292991
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  ||| ||||| |||||||| ||||||||||||| ||||||| | |||||||| | |||| | |||||||    
T  23293069 acacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcgg 23292991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 16189710 - 16189763
Alignment:
Q  168 acactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| ||||| ||||||||||||||| | |||||||||| ||||| ||||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcgg 16189763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 20743351 - 20743298
Alignment:
Q  153 aacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgt 206  Q
    |||||||||| |||||||| | ||||||||||||||||| | | ||||||||||    
T  20743351 aacactgacacgccgacacggataataatttgagaaaatgacataattcagtgt 20743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 24343499 - 24343560
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||| |||||||| | ||||||||||||||||| | | |||||||||| |||||| ||||||    
T  24343499 gacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcg 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 35952684 - 35952627
Alignment:
Q  159 gacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgt 216  Q
    |||| |||| ||||||||||||||||| ||||||| | |||||| ||| |||||||||    
T  35952684 gacacgccgccactgctaataatttgataaaatcatataattcaatgtaattatatgt 35952627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 847927 - 847975
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaat 191  Q
    |||||||||| ||||||||| |||||  | |||||||||||||||||||    
T  847927 acacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 3712568 - 3712516
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    ||||| |||||||||||||||||||||   |||||| ||| ||||||||||||    
T  3712568 gacaccgctaataatttgagaaaatcatgtaattcaatgtaattatatgtgtc 3712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 9996838 - 9996894
Alignment:
Q  165 ccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  |||||||||||||||||| | |||||||| | ||||||||| ||||    
T  9996838 ccgacactgacaataatttgagaaaatcacataattcagtataattatatgtctcgg 9996894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 12628674 - 12628618
Alignment:
Q  137 atacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatca 193  Q
    ||||| ||| |||||  |||||||||||||||||| | ||||||||||| |||||||    
T  12628674 atacggacatgacactgacactgacatgccgacacagttaataatttgaaaaaatca 12628618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 12797438 - 12797343
Alignment:
Q  125 tatgaagcacgaatacgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||| ||||| | |||||||  ||||||||| |||| ||   |||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  12797438 tatgaagcacggatacggatacgacacggacactgacacgccggcaaaactaataatttga-aaaatcacataattcagtgtaattacaagtgtcgg 12797343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 17345487 - 17345451
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaa 190  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  17345487 acactgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 18576093 - 18576045
Alignment:
Q  170 actgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgt 218  Q
    |||||| ||||||||||||||||| | ||||| |||| |||||||||||    
T  18576093 actgctgataatttgagaaaatcacataattcggtgtaattatatgtgt 18576045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 19482644 - 19482712
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||| ||||||||| ||||||||  |||||||||||| || |||| | ||||| |||| ||||    
T  19482644 acacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaatta 19482712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 135398 - 135317
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| |||||||| ||||  |||  ||||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||    
T  135398 cgaatacgacacagacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcgg 135317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 263453 - 263379
Alignment:
Q  145 acgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||  ||||||||||| | ||||||||||||||||||||||| || | |||||||||| |||||| |||||    
T  263453 acgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtc 263379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 548 - 467
Alignment:
Q  140 cgaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||| |||  ||||||| | |||||||||||||||||||||| ||||||| | |||||||||| |||| | |||||||    
T  548 cgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcgg 467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 26348 - 26446
Alignment:
Q  123 tctatgaagcacgaatacgaacac--gacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||||||||| |||| ||||  |||||| ||| ||||| | ||||||  |||||||||||||||||||| | |||||| |||| ||||||||||||    
T  26348 tctatgaagcacga-tacggacactagacacagacagtgacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtgtcg 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 9819 - 9752
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||| ||||||||||| |  ||||||||||||||||||||   |||||||||| ||||||||||||||    
T  9819 acacagacatgccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcgg 9752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 21019 - 21097
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||||  |||||||||||| ||||| | ||||||||||||||||||| | || || || | ||||||||||||||    
T  21019 acacgacacggacactgacatgctgacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcgg 21097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 44584 - 44530
Alignment:
Q  167 gacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||| ||||| ||||||||||||||| | |||||||||| ||||||||||||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgg 44530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 51798 - 51855
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    ||||||||| |||||||| ||||||||||||| ||||||| | |||||||||| ||||    
T  51798 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 90819 - 90896
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||||| |||||||||  || ||||   ||||||||||||||||||| | |||||||||| ||||||| |||||    
T  90819 acacgacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 92794 - 92851
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    ||||||||| |||||||| ||||||||||||||||||| | | |||||||||| ||||    
T  92794 acactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 20148 - 20216
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||  ||| ||||| |||||||| ||||||||||||| ||||||| | |||||||||| ||||    
T  20148 acacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 53170 - 53234
Alignment:
Q  157 ctgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| ||||| || || |||||||||||||||||| | |||||||||| |||||| |||||||    
T  53170 ctgacacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcgg 53234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 13387 - 13438
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtg 205  Q
    ||||||||| ||||||||  |||||||||||||||||||| | |||||||||    
T  13387 acactgacacgccgacacaactaataatttgagaaaatcacataattcagtg 13438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 21940 - 21889
Alignment:
Q  154 acactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtg 205  Q
    ||||||||| ||||||||  |||||||||||||||||||| | |||||||||    
T  21940 acactgacacgccgacacaactaataatttgagaaaatcacataattcagtg 21889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 241549 - 241648
Alignment:
Q  123 tctatgaagcacgaatac-gaacacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    ||||||||||||| | || | |||||||||  ||||||||| |||||||| ||||||||||||  ||||||| | |||| ||||| |||||  |||||||    
T  241549 tctatgaagcacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcgg 241648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 1013 - 1087
Alignment:
Q  145 acgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtc 219  Q
    |||||||| || ||||||  ||||||| ||||||||||||| ||||| | | |||||||||| | ||||||||||    
T  1013 acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 8774 - 8824
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatca 193  Q
    |||||||||  ||||||||| |||||||| ||||||||||||| |||||||    
T  8774 acacgacacggacactgacacgccgacacagctaataatttgaaaaaatca 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 70238 - 70332
Alignment:
Q  128 gaagcacgaatacgaacacga-cacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||||| ||||| |||| | |||| |||| |||||| |||||| | ||||||||||| ||||| | | |||||||||| |||||| |||||||    
T  70238 gaagcacggatacggacacaaacacagacacagacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcgg 70332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 225351 - 225274
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcg 220  Q
    |||||||||  ||||||||| |||||||| | ||||||||||||||||| | | ||| || ||| |||||| ||||||    
T  225351 acacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcg 225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 28836 - 28904
Alignment:
Q  153 aacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcattatatgtgtcgg 221  Q
    |||||| ||| |||||||| | ||||||||| ||||||||  | |||||| ||| ||||||||||||||    
T  28836 aacactaacacgccgacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcgg 28904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 46658 - 46726
Alignment:
Q  143 acacgacacaaacactgacatgccgacactgctaataatttgagaaaatcaaagaattcagtgtcatta 211  Q
    |||||||||  ||| ||||| |||||||| | ||||||||||| ||||||| | |||||||||| ||||    
T  46658 acacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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