View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6876A_low_303 (Length: 241)
Name: NF6876A_low_303
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6876A_low_303 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 55316226 - 55316454
Alignment:
| Q |
1 |
gtcacaaaaatgccattcgtacccactaaatactacaagcctacataattcccttcagcatttctcctttgttgactaattttcctacagagtgttacat |
100 |
Q |
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| T |
55316226 |
gtcacaaaaatgccattcgtacccactaaatactacaagcctacataattcccttcagcatttctcctttgttgactaattttcctacagagtgttacat |
55316325 |
T |
|
| Q |
101 |
tacataaaggttaatgtcattattatgtttctcacatcaagtacaaggcttcatcttggttaataactcaatttcattttaaacattgtactgcttgaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55316326 |
tacataaaggttaatgtcattattatgtttctcacatcaagtacaaggcttcatcttggttaataactcaatttcattttaaacattgtactgcttgaac |
55316425 |
T |
|
| Q |
201 |
ttgatgttatcatgaaattttcctatatt |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
55316426 |
ttgatgttatcatgaaattttcctatatt |
55316454 |
T |
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