View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6876A_low_306 (Length: 240)

Name: NF6876A_low_306
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6876A_low_306
NF6876A_low_306
[»] chr7 (32 HSPs)
chr7 (132-233)||(24789733-24789834)
chr7 (132-233)||(20343789-20343890)
chr7 (132-225)||(6592522-6592614)
chr7 (132-225)||(6594740-6594832)
chr7 (132-225)||(18388942-18389034)
chr7 (132-225)||(18392378-18392470)
chr7 (132-225)||(1562186-1562278)
chr7 (1-233)||(32060500-32060732)
chr7 (132-231)||(43504332-43504431)
chr7 (1-107)||(20343656-20343762)
chr7 (1-57)||(2058393-2058449)
chr7 (132-233)||(48408687-48408788)
chr7 (1-57)||(24789583-24789639)
chr7 (132-233)||(39731261-39731362)
chr7 (1-99)||(20357184-20357284)
chr7 (132-233)||(24514943-24515043)
chr7 (132-233)||(25767140-25767237)
chr7 (132-233)||(4178660-4178760)
chr7 (4-99)||(21640167-21640264)
chr7 (1-57)||(1533060-1533116)
chr7 (1-57)||(6592709-6592765)
chr7 (1-57)||(6594925-6594981)
chr7 (1-57)||(18389132-18389188)
chr7 (1-57)||(18392568-18392624)
chr7 (132-233)||(29990940-29991040)
chr7 (1-39)||(21646448-21646486)
chr7 (136-233)||(35853804-35853900)
chr7 (132-196)||(1113542-1113604)
chr7 (1-57)||(1562375-1562431)
chr7 (60-107)||(2058322-2058371)
chr7 (132-216)||(38671422-38671505)
chr7 (132-200)||(30024949-30025015)
[»] chr5 (42 HSPs)
chr5 (132-233)||(29720256-29720357)
chr5 (132-233)||(29722416-29722517)
chr5 (132-233)||(29751335-29751436)
chr5 (132-225)||(16544302-16544394)
chr5 (132-225)||(16546524-16546616)
chr5 (132-225)||(22536470-22536563)
chr5 (132-233)||(25078013-25078113)
chr5 (132-233)||(25135982-25136082)
chr5 (132-233)||(10593151-10593251)
chr5 (132-225)||(40379985-40380077)
chr5 (132-225)||(40382196-40382288)
chr5 (1-107)||(22536590-22536696)
chr5 (1-57)||(29751532-29751588)
chr5 (132-233)||(9789399-9789500)
chr5 (132-233)||(18441823-18441924)
chr5 (132-233)||(16409367-16409468)
chr5 (132-233)||(26177775-26177876)
chr5 (1-57)||(24136271-24136327)
chr5 (132-233)||(26170666-26170767)
chr5 (132-233)||(36074227-36074327)
chr5 (1-57)||(35388084-35388142)
chr5 (132-233)||(13342946-13343046)
chr5 (132-233)||(30182474-30182574)
chr5 (1-57)||(16544150-16544206)
chr5 (1-57)||(16546372-16546428)
chr5 (1-57)||(25077862-25077918)
chr5 (1-57)||(25135831-25135887)
chr5 (1-57)||(40379834-40379890)
chr5 (1-57)||(40382045-40382101)
chr5 (132-233)||(25412647-25412747)
chr5 (132-216)||(13488088-13488171)
chr5 (1-57)||(27445355-27445410)
chr5 (1-57)||(27450198-27450253)
chr5 (1-57)||(43592661-43592716)
chr5 (1-57)||(43599106-43599161)
chr5 (1-57)||(43604598-43604653)
chr5 (1-57)||(43610090-43610145)
chr5 (1-39)||(29720123-29720161)
chr5 (132-216)||(28750855-28750938)
chr5 (1-62)||(31180633-31180693)
chr5 (1-57)||(10592999-10593055)
chr5 (132-196)||(31182858-31182920)
[»] chr2 (19 HSPs)
chr2 (132-233)||(6266583-6266684)
chr2 (132-225)||(12647568-12647660)
chr2 (132-233)||(32289457-32289558)
chr2 (132-233)||(4484513-4484614)
chr2 (132-233)||(36205846-36205946)
chr2 (4-57)||(9296021-9296074)
chr2 (1-57)||(11098543-11098599)
chr2 (1-57)||(14291913-14291969)
chr2 (132-233)||(4503315-4503415)
chr2 (132-233)||(45099640-45099740)
chr2 (132-196)||(30833230-30833293)
chr2 (1-57)||(12647755-12647811)
chr2 (132-233)||(5723437-5723537)
chr2 (132-233)||(36988258-36988358)
chr2 (132-233)||(2334600-2334700)
chr2 (132-216)||(11151791-11151874)
chr2 (132-216)||(39284770-39284853)
chr2 (132-216)||(42362237-42362320)
chr2 (1-37)||(25410073-25410109)
[»] chr1 (23 HSPs)
chr1 (132-233)||(9987094-9987195)
chr1 (132-233)||(40282269-40282370)
chr1 (132-233)||(21053850-21053951)
chr1 (132-233)||(20622413-20622514)
chr1 (132-233)||(9036310-9036410)
chr1 (132-225)||(44203526-44203618)
chr1 (132-233)||(51765280-51765380)
chr1 (1-55)||(20622610-20622664)
chr1 (132-233)||(20762557-20762657)
chr1 (1-57)||(24786981-24787037)
chr1 (1-57)||(24793803-24793859)
chr1 (132-216)||(13316518-13316601)
chr1 (1-57)||(44203374-44203430)
chr1 (1-39)||(24202387-24202425)
chr1 (1-57)||(9036159-9036215)
chr1 (1-105)||(51765147-51765254)
chr1 (68-107)||(9036246-9036285)
chr1 (132-233)||(3156751-3156851)
chr1 (1-39)||(40282116-40282154)
chr1 (132-216)||(31659123-31659206)
chr1 (1-37)||(21053697-21053733)
chr1 (132-196)||(28220447-28220509)
chr1 (132-196)||(28223642-28223704)
[»] chr8 (30 HSPs)
chr8 (132-233)||(3439396-3439497)
chr8 (132-233)||(25689847-25689948)
chr8 (132-225)||(15290417-15290509)
chr8 (132-225)||(15470786-15470878)
chr8 (132-225)||(42575507-42575599)
chr8 (132-233)||(2627627-2627728)
chr8 (1-57)||(36979802-36979858)
chr8 (1-107)||(15290300-15290407)
chr8 (1-107)||(15470669-15470776)
chr8 (132-233)||(17982538-17982638)
chr8 (132-233)||(31218142-31218242)
chr8 (132-233)||(34254512-34254611)
chr8 (1-57)||(4759690-4759746)
chr8 (1-57)||(25689697-25689753)
chr8 (1-57)||(30656070-30656126)
chr8 (1-39)||(1261571-1261609)
chr8 (4-99)||(33037446-33037543)
chr8 (132-233)||(34256688-34256787)
chr8 (1-57)||(42575696-42575752)
chr8 (132-233)||(1746401-1746501)
chr8 (1-55)||(3439243-3439297)
chr8 (132-233)||(19945543-19945643)
chr8 (132-233)||(44303739-44303839)
chr8 (1-57)||(18852783-18852839)
chr8 (68-107)||(3439330-3439369)
chr8 (132-216)||(10929686-10929767)
chr8 (132-232)||(12702822-12702921)
chr8 (132-216)||(43036308-43036391)
chr8 (1-57)||(18870177-18870233)
chr8 (132-196)||(30143227-30143289)
[»] chr6 (43 HSPs)
chr6 (1-225)||(27647624-27647848)
chr6 (132-225)||(6027141-6027233)
chr6 (132-233)||(25421198-25421298)
chr6 (132-225)||(33342288-33342380)
chr6 (132-233)||(16554762-16554862)
chr6 (132-233)||(16631318-16631418)
chr6 (139-233)||(16653012-16653105)
chr6 (132-233)||(16578693-16578793)
chr6 (132-233)||(16616587-16616687)
chr6 (132-225)||(34164751-34164843)
chr6 (132-225)||(34166973-34167065)
chr6 (132-233)||(411994-412094)
chr6 (132-233)||(3072935-3073036)
chr6 (132-233)||(6097615-6097717)
chr6 (132-233)||(2171713-2171814)
chr6 (4-85)||(5266432-5266513)
chr6 (1-57)||(5674386-5674442)
chr6 (132-233)||(31404856-31404957)
chr6 (1-57)||(34166823-34166879)
chr6 (1-64)||(25420953-25421016)
chr6 (1-64)||(25421047-25421110)
chr6 (132-233)||(16452512-16452612)
chr6 (1-57)||(13151006-13151062)
chr6 (1-57)||(16554610-16554666)
chr6 (1-57)||(16578889-16578945)
chr6 (1-57)||(16616435-16616491)
chr6 (1-57)||(16631166-16631222)
chr6 (1-57)||(16652853-16652909)
chr6 (1-57)||(33342475-33342531)
chr6 (1-57)||(34164601-34164657)
chr6 (132-233)||(5406381-5406481)
chr6 (132-233)||(5410706-5410806)
chr6 (132-233)||(30834719-30834819)
chr6 (1-57)||(6026990-6027046)
chr6 (1-57)||(6136335-6136391)
chr6 (68-107)||(16554697-16554736)
chr6 (68-107)||(16631253-16631292)
chr6 (68-107)||(16652940-16652979)
chr6 (1-39)||(411843-411881)
chr6 (1-39)||(3073148-3073186)
chr6 (132-233)||(5413575-5413675)
chr6 (1-107)||(6097741-6097850)
chr6 (48-106)||(5674452-5674512)
[»] chr3 (56 HSPs)
chr3 (132-233)||(6716392-6716493)
chr3 (132-233)||(6718576-6718677)
chr3 (132-233)||(54635017-54635118)
chr3 (132-233)||(3617342-3617442)
chr3 (132-225)||(4600927-4601019)
chr3 (132-233)||(45282875-45282976)
chr3 (132-225)||(4598706-4598798)
chr3 (132-225)||(10209068-10209160)
chr3 (132-225)||(10211288-10211380)
chr3 (132-225)||(25637321-25637413)
chr3 (132-225)||(10056112-10056204)
chr3 (132-225)||(10058334-10058426)
chr3 (132-225)||(10060556-10060648)
chr3 (132-225)||(10062778-10062870)
chr3 (132-225)||(10065000-10065092)
chr3 (132-225)||(10067222-10067314)
chr3 (1-106)||(2671221-2671328)
chr3 (132-233)||(800983-801084)
chr3 (1-57)||(8477790-8477846)
chr3 (132-233)||(23200319-23200420)
chr3 (132-233)||(23198120-23198221)
chr3 (132-233)||(5258327-5258427)
chr3 (132-233)||(9636309-9636410)
chr3 (1-107)||(10208935-10209042)
chr3 (1-62)||(8738679-8738740)
chr3 (1-62)||(9090917-9090978)
chr3 (1-57)||(10058184-10058240)
chr3 (1-57)||(10060406-10060462)
chr3 (1-57)||(10062628-10062684)
chr3 (1-57)||(10064850-10064906)
chr3 (48-107)||(54634933-54634992)
chr3 (132-233)||(5260506-5260606)
chr3 (1-57)||(4598894-4598950)
chr3 (1-57)||(4601115-4601171)
chr3 (1-57)||(7167670-7167726)
chr3 (1-57)||(10055962-10056018)
chr3 (1-57)||(10067072-10067128)
chr3 (1-57)||(10211135-10211191)
chr3 (1-57)||(25637169-25637225)
chr3 (1-57)||(45282722-45282778)
chr3 (1-57)||(54634866-54634922)
chr3 (68-107)||(45282809-45282848)
chr3 (1-35)||(40372412-40372446)
chr3 (132-233)||(45095050-45095150)
chr3 (1-57)||(6716241-6716297)
chr3 (1-57)||(6718425-6718481)
chr3 (1-57)||(27352237-27352293)
chr3 (68-107)||(6716328-6716367)
chr3 (68-107)||(6718512-6718551)
chr3 (132-182)||(7782375-7782424)
chr3 (132-233)||(32744609-32744709)
chr3 (132-216)||(39153561-39153644)
chr3 (1-57)||(3617190-3617246)
chr3 (132-196)||(7762151-7762213)
chr3 (1-57)||(28503475-28503530)
chr3 (132-196)||(37408344-37408406)
[»] scaffold0674 (2 HSPs)
scaffold0674 (132-225)||(3908-4000)
scaffold0674 (1-57)||(4098-4154)
[»] scaffold0565 (2 HSPs)
scaffold0565 (132-225)||(2786-2878)
scaffold0565 (1-57)||(2973-3029)
[»] scaffold0137 (2 HSPs)
scaffold0137 (132-225)||(6167-6259)
scaffold0137 (1-57)||(6016-6072)
[»] chr4 (26 HSPs)
chr4 (132-233)||(7122575-7122675)
chr4 (132-233)||(7124794-7124894)
chr4 (132-225)||(8395498-8395590)
chr4 (132-225)||(5138183-5138275)
chr4 (134-225)||(8393291-8393381)
chr4 (132-225)||(5135957-5136050)
chr4 (132-233)||(31495492-31495593)
chr4 (1-106)||(29760995-29761102)
chr4 (132-233)||(13992468-13992569)
chr4 (1-57)||(7122423-7122479)
chr4 (68-107)||(8393225-8393264)
chr4 (68-107)||(8395434-8395473)
chr4 (1-35)||(24742387-24742421)
chr4 (132-216)||(5429564-5429647)
chr4 (1-57)||(5135806-5135862)
chr4 (1-57)||(5138032-5138088)
chr4 (1-57)||(8393138-8393194)
chr4 (1-57)||(8395347-8395403)
chr4 (132-229)||(29999992-30000088)
chr4 (132-233)||(56178819-56178919)
chr4 (132-216)||(48142927-48143010)
chr4 (132-216)||(52082857-52082940)
chr4 (1-29)||(7124645-7124673)
chr4 (1-57)||(51520839-51520894)
chr4 (132-196)||(52093885-52093947)
chr4 (1-57)||(56141668-56141723)
[»] scaffold0002 (1 HSPs)
scaffold0002 (132-233)||(434418-434518)
[»] scaffold1519 (1 HSPs)
scaffold1519 (132-233)||(802-902)
[»] scaffold0491 (3 HSPs)
scaffold0491 (132-233)||(11344-11445)
scaffold0491 (132-196)||(8956-9019)
scaffold0491 (1-105)||(9045-9152)
[»] scaffold0286 (1 HSPs)
scaffold0286 (132-190)||(22229-22286)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-105)||(17588-17695)


Alignment Details
Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 24789733 - 24789834
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24789733 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 24789832  T
Q  232 tg 233  Q
    ||    
T  24789833 tg 24789834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 20343789 - 20343890
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  20343789 cttggggaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 20343888  T
Q  232 tg 233  Q
    ||    
T  20343889 tg 20343890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 6592614 - 6592522
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6592614 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 6592522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 6594832 - 6594740
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6594832 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 6594740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 18389034 - 18388942
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18389034 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 18388942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 18392470 - 18392378
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18392470 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 18392378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 1562278 - 1562186
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1562278 cttggggaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 1562186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 32060732 - 32060500
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagta-taaagtgttcttgtgc 99  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||  |||||   |||||| || |||||| | ||||||||||||||    
T  32060732 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgc 32060633  T
Q  100 agatttgannnnnnnnnnnnnnnnnnnnnnnncttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaa 199  Q
    ||||||||                        |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||    
T  32060632 agatttgaagggaagaggttggaagagagagacttgggaaatcaaaggg-taagctctagggtttagggttctttgattagagtatctcttgggttgaaa 32060534  T
Q  200 acatgggaaacaccttgtagagagaaaatcattg 233  Q
    ||||||||||||||||||| ||||| ||||||||    
T  32060533 acatgggaaacaccttgtaaagagagaatcattg 32060500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 43504431 - 43504332
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||  |||||||| || | ||||||||||||||||||| |||||||||||||    
T  43504431 cttgggaaatcaaagggagaaactctagggtttagag-tctttgattagagcttctcttggcttgggaaacatgggaaacaccttgaagagagaaaatca 43504333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20343656 - 20343762
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagtataaagtgttcttgtgca 100  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||| ||||||||  |||| |  |||||| || |||||||||||||||||||||||    
T  20343656 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacgatttcaacagaggaagactagtataaagtgttcttgtgca 20343755  T
Q  101 gatttga 107  Q
    |||||||    
T  20343756 gatttga 20343762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2058449 - 2058393
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2058449 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 2058393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 48408687 - 48408788
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  48408687 cttgggaaatcaaagggagcaactctagggtttaggg-tctttgattagagtttctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 48408785  T
Q  231 ttg 233  Q
    |||    
T  48408786 ttg 48408788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24789583 - 24789639
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24789583 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcttgac 24789639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 39731261 - 39731362
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  39731261 cttgggaaatcaaagggagtaactctagggtttaggg-tctttgattagagcttctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 39731359  T
Q  231 ttg 233  Q
    |||    
T  39731360 ttg 39731362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20357184 - 20357284
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagtataaa--gtgttcttgtg 98  Q
    |||||||||||||||||||||||| ||||| |||||||||   |||||||||||| |  |||||||||||||| || |||||||| |  |||||||||||    
T  20357184 tcgttaagtatccttgataaggaccggtcaaaccttgggtcagacgcaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 20357283  T
Q  99 c 99  Q
    |    
T  20357284 c 20357284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 24515043 - 24514943
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  24515043 cttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 24514946  T
Q  231 ttg 233  Q
    |||    
T  24514945 ttg 24514943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 25767237 - 25767140
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||   | | |||||| | ||||||||||  ||| |||||||||    
T  25767237 cttgagaaatcaaagggagcaactctagggtttaggg-tctttgattagagtttctctt---tgggaaacattgtaaacaccttggtgagtgaaaatcat 25767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 4178660 - 4178760
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||| ||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  4178660 cttgagaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 4178757  T
Q  231 ttg 233  Q
    |||    
T  4178758 ttg 4178760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 21640264 - 21640167
Alignment:
Q  4 ttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagtataaa--gtgttcttgtgc 99  Q
    |||||||||  ||||||||||||||||| ||||||   | ||||||||||||||  |||||||||||| |||| |||||||| |  ||||||||||||    
T  21640264 ttaagtatcactgataaggactggtcatgccttggaacggacgcaaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgc 21640167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1533060 - 1533116
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||||||| ||||||||||   ||| |||||||||||    
T  1533060 tcgttaagtatccttgataaggactggttataccttgggacatacacaaatcgtgac 1533116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6592765 - 6592709
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  6592765 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 6592709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6594981 - 6594925
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  6594981 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 6594925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18389188 - 18389132
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  18389188 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 18389132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18392624 - 18392568
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  18392624 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 18392568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 29990940 - 29991040
Alignment:
Q  132 cttgggaaatcaaagggaga-aactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatc 229  Q
    |||||||||||||| ||||| |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| |||||||    
T  29990940 cttgggaaatcaaa-ggagacaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatc 29991036  T
Q  230 attg 233  Q
    ||||    
T  29991037 attg 29991040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21646486 - 21646448
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttggg 39  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  21646486 tcgttaagtatccttgataagaactggtcataccttggg 21646448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 35853804 - 35853900
Alignment:
Q  136 ggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatcattg 233  Q
    |||||||||||| || |||| |||||||||||| ||||||||| |||| ||||||||||| | |||||| | ||||||||||  ||| |||||||||||    
T  35853804 ggaaatcaaaggtagcaactttagggtttaggg-tctttgatttgagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattg 35853900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 1113542 - 1113604
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg 196  Q
    |||||||||||||||| || |||| ||||||| |||| |||||||||||||| ||||||||||||    
T  1113542 cttgggaaatcaaaggaagtaactttagggttgaggg-tctttgattagagt-tctcttgggttg 1113604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1562431 - 1562375
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | ||||| |  | ||||||||||||||    
T  1562431 tcgttaagtatccttgataaggactggtcgttccttgtgacggacgcaaatcgtgac 1562375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 2058371 - 2058322
Alignment:
Q  60 gattgcttcagagggaggctagtataaa--gtgttcttgtgcagatttga 107  Q
    |||||||||||||| ||||||||||| |  ||||||||||||||||||||    
T  2058371 gattgcttcagaggaaggctagtatatattgtgttcttgtgcagatttga 2058322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 38671505 - 38671422
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  38671505 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 38671422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 30025015 - 30024949
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaa 200  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| |||||| |||||||||    
T  30025015 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttaggttgaaaa 30024949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 29720256 - 29720357
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29720256 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 29720355  T
Q  232 tg 233  Q
    ||    
T  29720356 tg 29720357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 29722416 - 29722517
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29722416 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 29722515  T
Q  232 tg 233  Q
    ||    
T  29722516 tg 29722517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 29751436 - 29751335
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29751436 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 29751337  T
Q  232 tg 233  Q
    ||    
T  29751336 tg 29751335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 16544302 - 16544394
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16544302 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 16544394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 16546524 - 16546616
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16546524 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 16546616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 22536563 - 22536470
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  22536563 cttgggaaatcaaagggagaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccctgcagagagaa 22536470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 25078013 - 25078113
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  25078013 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 25078111  T
Q  232 tg 233  Q
    ||    
T  25078112 tg 25078113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 25135982 - 25136082
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  25135982 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 25136080  T
Q  232 tg 233  Q
    ||    
T  25136081 tg 25136082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 10593151 - 10593251
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  10593151 cttgggaaatcaaagggggaa-ctctagggtttagggttctttgattagagtatctcttgggtagaaaacatgggaaacaccttgtaaagagagaatcat 10593249  T
Q  232 tg 233  Q
    ||    
T  10593250 tg 10593251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 40379985 - 40380077
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40379985 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctctcgggttgaaaacatgggaaacaccttgtagagagaa 40380077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 40382196 - 40382288
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40382196 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctctcgggttgaaaacatgggaaacaccttgtagagagaa 40382288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22536696 - 22536590
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagtataaagtgttcttgtgca 100  Q
    ||||||||||||||||||||||||||||| |  ||||||| |||| || ||||||||  |||| |  |||||| ||||||||||||||||||||||||||    
T  22536696 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacacagatcgtgacacgatttcaacagaggaaggctagtataaagtgttcttgtgca 22536597  T
Q  101 gatttga 107  Q
    |||||||    
T  22536596 gatttga 22536590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29751588 - 29751532
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29751588 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 29751532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 9789500 - 9789399
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||  ||||||||||| | |||||||||||||||||||  ||| ||||||||    
T  9789500 cttgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatgggaaacaccttggtgagtgaaaatca 9789402  T
Q  231 ttg 233  Q
    |||    
T  9789401 ttg 9789399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 18441924 - 18441823
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||  ||||||||||| | |||||||||||||||||||  ||| ||||||||    
T  18441924 cttgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatgggaaacaccttggtgagtgaaaatca 18441826  T
Q  231 ttg 233  Q
    |||    
T  18441825 ttg 18441823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 16409367 - 16409468
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||  ||||||||||| | |||||||| ||||||||||  ||| ||||||||    
T  16409367 cttgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatggtaaacaccttggtgagtgaaaatca 16409465  T
Q  231 ttg 233  Q
    |||    
T  16409466 ttg 16409468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 26177775 - 26177876
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||  ||||||||||| | |||||||| ||||||||||  ||| ||||||||    
T  26177775 cttgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatggtaaacaccttggtgagtgaaaatca 26177873  T
Q  231 ttg 233  Q
    |||    
T  26177874 ttg 26177876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24136327 - 24136271
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  24136327 tcgttaagtatccttgataaggactggtcataccttgggacgtacgcaaatcgtgac 24136271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 26170666 - 26170767
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||| ||  ||||||||||| | |||||||| ||||||||||  ||| ||||||||    
T  26170666 cttgggaaatcaaagggagtaactctagggtttagag-tctttgattacagcttctcttgggttgggaaacatggtaaacaccttggtgagtgaaaatca 26170764  T
Q  231 ttg 233  Q
    |||    
T  26170765 ttg 26170767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 36074327 - 36074227
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  36074327 cttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 36074230  T
Q  231 ttg 233  Q
    |||    
T  36074229 ttg 36074227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 35388142 - 35388084
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgtgac 57  Q
    |||||||||||||||||||||||||||||||||||||||  |||||  |||||||||||    
T  35388142 tcgttaagtatccttgataaggactggtcataccttgggacgtacgttcaaatcgtgac 35388084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 13342946 - 13343046
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| ||| |||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  13342946 cttgggaaatcaaaggaagcaactttagggtttaggg-tctctgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 13343043  T
Q  231 ttg 233  Q
    |||    
T  13343044 ttg 13343046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 30182474 - 30182574
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| ||||| |||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  30182474 cttgggaaatcaaaggaagcaactttagggattaggg-tctttgattagagt-tctcttgggttgggaaacattgcaaacaccttggtgagtgaaaatca 30182571  T
Q  231 ttg 233  Q
    |||    
T  30182572 ttg 30182574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16544150 - 16544206
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  16544150 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 16544206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16546372 - 16546428
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  16546372 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 16546428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25077862 - 25077918
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  25077862 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 25077918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25135831 - 25135887
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  25135831 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 25135887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40379834 - 40379890
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  40379834 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 40379890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40382045 - 40382101
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  40382045 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 40382101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 25412647 - 25412747
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||  |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  25412647 cttgggaaatcaaaggaggcaacattagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 25412744  T
Q  231 ttg 233  Q
    |||    
T  25412745 ttg 25412747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 13488088 - 13488171
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| |||||||| | ||||||||||    
T  13488088 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttggaaaacattgtaaacaccttg 13488171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27445410 - 27445355
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||||||| ||||||||||   ||||||||||||||    
T  27445410 tcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtgac 27445355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27450253 - 27450198
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||||||| ||||||||||   ||||||||||||||    
T  27450253 tcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtgac 27450198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43592716 - 43592661
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||||||| ||||||||||   ||||||||||||||    
T  43592716 tcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtgac 43592661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43599161 - 43599106
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||||||| ||||||||||   ||||||||||||||    
T  43599161 tcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtgac 43599106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43604653 - 43604598
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||||||| ||||||||||   ||||||||||||||    
T  43604653 tcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtgac 43604598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43610145 - 43610090
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||||||| ||||||||||   ||||||||||||||    
T  43610145 tcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtgac 43610090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29720123 - 29720161
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttggg 39  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  29720123 tcgttaagtttccatgataaggactggtcataccttggg 29720161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 28750938 - 28750855
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  28750938 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgaaaacaccttg 28750855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31180693 - 31180633
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgat 62  Q
    ||||||||||||  |||||||||||||||| |||||||||   |||||||||||||| ||||    
T  31180693 tcgttaagtatcactgataaggactggtca-accttgggtcagacgcaaatcgtgacatgat 31180633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10592999 - 10593055
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||||||| |  ||| ||| ||||||| ||||||||    
T  10592999 tcgttaagtatccgtgataaggactggtcgtttcttcggtggtacgcagatcgtgac 10593055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 31182858 - 31182920
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg 196  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||    
T  31182858 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttg 31182920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 6266583 - 6266684
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6266583 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 6266682  T
Q  232 tg 233  Q
    ||    
T  6266683 tg 6266684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 12647660 - 12647568
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12647660 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 12647568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 32289457 - 32289558
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttggg-ttgaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||||  ||||||||| ||| |||||||| ||||||||||  ||| ||||||||    
T  32289457 cttgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttctcttgggtttggaaacatggtaaacaccttggtgagtgaaaatca 32289555  T
Q  231 ttg 233  Q
    |||    
T  32289556 ttg 32289558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 4484614 - 4484513
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||| | |||||| | ||||||||||  ||| | ||||||    
T  4484614 cttgggaaatcaaagggagtaactctagggtttaggg-tctttgattagagcttctcttgggttgggaaacattgtaaacaccttggtgagtgtaaatca 4484516  T
Q  231 ttg 233  Q
    |||    
T  4484515 ttg 4484513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 36205946 - 36205846
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||||| ||||||||||  ||| ||||||||    
T  36205946 cttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacatggtaaacaccttggtgagtgaaaatca 36205849  T
Q  231 ttg 233  Q
    |||    
T  36205848 ttg 36205846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 9296021 - 9296074
Alignment:
Q  4 ttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  9296021 ttaagtatccttgataaggactggtcataccttgggtcggacgcaaatcgtgac 9296074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11098543 - 11098599
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  11098543 tcgttaagtatcactgataaggactggtcaaaccttgggttgtacgcaaatcgtgac 11098599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14291969 - 14291913
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  14291969 tcgttaagtaccactgataaggactggtcataccttgggttgtacgcaaatcgtgac 14291913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 4503415 - 4503315
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| ||||||||| ||||||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  4503415 cttgggaaatcaaaggaagcaactttagggttta-ggttctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 4503318  T
Q  231 ttg 233  Q
    |||    
T  4503317 ttg 4503315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 45099640 - 45099740
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  45099640 cttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 45099737  T
Q  231 ttg 233  Q
    |||    
T  45099738 ttg 45099740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 30833230 - 30833293
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg 196  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||  | ||||||||||    
T  30833230 cttgggaaatcaaagggagtaactctagggtttagggtt-tttgattagagcttatcttgggttg 30833293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12647811 - 12647755
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  12647811 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 12647755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 5723537 - 5723437
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| |||||||| ||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  5723537 cttgggaaatcaaaggaggcaactttagggttt-ggggtctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 5723440  T
Q  231 ttg 233  Q
    |||    
T  5723439 ttg 5723437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 36988358 - 36988258
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  36988358 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacatagtaaacaccttggtgagtgaaaatca 36988261  T
Q  231 ttg 233  Q
    |||    
T  36988260 ttg 36988258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 2334700 - 2334600
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| ||||||| |||| | |||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  2334700 cttgggaaatcaaaggaggtaactttagggttgaggg-tatttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 2334603  T
Q  231 ttg 233  Q
    |||    
T  2334602 ttg 2334600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 11151874 - 11151791
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  11151874 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 11151791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 39284770 - 39284853
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  39284770 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 39284853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 42362237 - 42362320
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  42362237 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 42362320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25410109 - 25410073
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttg 37  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  25410109 tcgttaagtatccttgataaggaatggtcgtaccttg 25410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 9987094 - 9987195
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9987094 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 9987193  T
Q  232 tg 233  Q
    ||    
T  9987194 tg 9987195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 40282269 - 40282370
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40282269 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 40282368  T
Q  232 tg 233  Q
    ||    
T  40282369 tg 40282370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 21053850 - 21053951
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21053850 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagaaaaaatcat 21053949  T
Q  232 tg 233  Q
    ||    
T  21053950 tg 21053951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 20622514 - 20622413
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20622514 cttgggaaatcaaatggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagggaaaatcat 20622415  T
Q  232 tg 233  Q
    ||    
T  20622414 tg 20622413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 9036310 - 9036410
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  9036310 cttgggaaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 9036408  T
Q  232 tg 233  Q
    ||    
T  9036409 tg 9036410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 44203526 - 44203618
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44203526 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 44203618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 51765280 - 51765380
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||  |||||||||||| |||||| | ||||||||||  ||| | |||||||    
T  51765280 cttgggaaatcaaagggagtaactctagggtttaggg-tctttgattagagcttctcttgggttggaaacattgtaaacaccttggtgagtgtaaatcat 51765378  T
Q  232 tg 233  Q
    ||    
T  51765379 tg 51765380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20622664 - 20622610
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtg 55  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20622664 tcgttaagtatccttgataaggactggtcataccttgggtggtacgcaaatcgtg 20622610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 20762557 - 20762657
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  20762557 cttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 20762654  T
Q  231 ttg 233  Q
    |||    
T  20762655 ttg 20762657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24786981 - 24787037
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||||||||| |||||||||   ||||||||||||||    
T  24786981 tcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgac 24787037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24793803 - 24793859
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||||||||| |||||||||   ||||||||||||||    
T  24793803 tcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgac 24793859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 13316601 - 13316518
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  13316601 cttgggaaatcaaaggtagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 13316518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44203374 - 44203430
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  44203374 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 44203430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24202387 - 24202425
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttggg 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  24202387 tcgttaagtatccttgataaggactggtcatatcttggg 24202425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9036159 - 9036215
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| |  |||||||  |||||| ||||||||    
T  9036159 tcgttaagtatccttgataaggactggtcgtttcttgggtgttacgcagatcgtgac 9036215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 51765147 - 51765254
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgtgacgtgattgcttcagagggaggctagta-taaagtgttcttgt 97  Q
    ||||||||| ||| ||||||||||||||||||||||| |  |||||  | |||||||||  ||||   |||| || ||||||||| | ||||||||||||    
T  51765147 tcgttaagtttccatgataaggactggtcataccttgtgacgtacgtaccaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgt 51765246  T
Q  98 gcagattt 105  Q
    ||||||||    
T  51765247 gcagattt 51765254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 9036246 - 9036285
Alignment:
Q  68 cagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  9036246 cagaggaagactagtataaagtgttcttgtgcagatttga 9036285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 3156751 - 3156851
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttggg-ttgaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||| ||| |||||| | ||||||| ||  ||| ||||||||    
T  3156751 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggtttggaaacattgtaaacaccctggtgagtgaaaatca 3156848  T
Q  231 ttg 233  Q
    |||    
T  3156849 ttg 3156851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40282116 - 40282154
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttggg 39  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  40282116 tcgttaagtttccatgataaggactggtcataccttggg 40282154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 31659123 - 31659206
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  31659123 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttcggaaacattgtaaacaccttg 31659206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21053697 - 21053733
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttg 37  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  21053697 tcgttaagtttccatgataaggactggtcataccttg 21053733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 28220509 - 28220447
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg 196  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||    
T  28220509 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttg 28220447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 28223704 - 28223642
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg 196  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||    
T  28223704 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttg 28223642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 3439396 - 3439497
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3439396 cttgagaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagaaaatcat 3439495  T
Q  232 tg 233  Q
    ||    
T  3439496 tg 3439497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 25689847 - 25689948
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  25689847 cttgggaaatcaaagggagaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 25689946  T
Q  232 tg 233  Q
    ||    
T  25689947 tg 25689948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 15290417 - 15290509
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15290417 cttgggaaatcaaaggga-aagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 15290509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 15470786 - 15470878
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15470786 cttgggaaatcaaaggga-aagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 15470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 42575599 - 42575507
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42575599 cttgggaaatcaaaggga-aagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 42575507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 2627627 - 2627728
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||||||||  ||||||||||||  ||||||||||||||||||| |||||||||||||    
T  2627627 cttgggaaatcaaagggagtaactctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatca 2627725  T
Q  231 ttg 233  Q
    |||    
T  2627726 ttg 2627728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36979858 - 36979802
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  36979858 tcgttaagtatctctgataaggactggtcataccttgggttgtacgcaaatcgtgac 36979802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15290300 - 15290407
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagta-taaagtgttcttgtgc 99  Q
    ||||||||||||||||||||||||||||  | |||||||  | ||||||||||||||  |||||   |||||| || |||||| | ||||||||||||||    
T  15290300 tcgttaagtatccttgataaggactggtagttccttgggacggacgcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgc 15290399  T
Q  100 agatttga 107  Q
    ||||||||    
T  15290400 agatttga 15290407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15470669 - 15470776
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagta-taaagtgttcttgtgc 99  Q
    ||||||||||||||||||||||||||||  | |||||||  | ||||||||||||||  |||||   |||||| || |||||| | ||||||||||||||    
T  15470669 tcgttaagtatccttgataaggactggtagttccttgggacggacgcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgc 15470768  T
Q  100 agatttga 107  Q
    ||||||||    
T  15470769 agatttga 15470776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 17982538 - 17982638
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  17982538 cttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 17982635  T
Q  231 ttg 233  Q
    |||    
T  17982636 ttg 17982638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 31218142 - 31218242
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  31218142 cttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 31218239  T
Q  231 ttg 233  Q
    |||    
T  31218240 ttg 31218242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 34254611 - 34254512
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||  | |||| |||||||||||| |||||||||||||| |||||||||||| | |||| | ||||||||||  ||| |||||||||    
T  34254611 cttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tctcttgggttggagacattgtaaacaccttggtgagtgaaaatcat 34254514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4759690 - 4759746
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||||||||||||   | ||||||||||||||    
T  4759690 tcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtgac 4759746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25689697 - 25689753
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||| |||||| |||||||||||    
T  25689697 tcgttaagtatccttgataaggactggtcgttccttggtttgtacacaaatcgtgac 25689753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30656126 - 30656070
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||||||||| |||||||||   ||||||||||||||    
T  30656126 tcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgac 30656070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1261571 - 1261609
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttggg 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1261571 tcgttaagtatccttgataaggactggtcataccttggg 1261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 33037446 - 33037543
Alignment:
Q  4 ttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagtataaa--gtgttcttgtgc 99  Q
    |||||||||  ||||||||||||||||| ||||||   | ||||||||||||||  |||||||||||| |||| |||||||| |  ||||||||||||    
T  33037446 ttaagtatcactgataaggactggtcatgccttggaacggacgcaaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgc 33037543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 34256787 - 34256688
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||  | |||| |||||||||||| |||||||||||||| | |||||||||| |||||| | ||||||||||  | | |||||||||    
T  34256787 cttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tatcttgggttggaaacattgtaaacaccttggtgtgtgaaaatcat 34256690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42575752 - 42575696
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  42575752 tcgttaagtatccttgataaggactggtctttccttgggacggacgcaaatcgtgac 42575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 1746501 - 1746401
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| || ||||||||||| |||||| |||| | |||||| | ||||||||||  ||| ||||||||    
T  1746501 cttgggaaatcaaaggaagcaactttagggtttaggg-tccttgattagagt-tctctttggttgggaaacattgtaaacaccttggtgagtgaaaatca 1746404  T
Q  231 ttg 233  Q
    |||    
T  1746403 ttg 1746401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3439243 - 3439297
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtg 55  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||| ||||||    
T  3439243 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcatatcgtg 3439297  T

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Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 19945643 - 19945543
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggt-tgaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||| | |||||||||||||| ||||||||||  | |||||| | ||||||||||  ||| ||||||||    
T  19945643 cttgggaaatcaaaggaagcaactttagggtttagag-tctttgattagagt-tctcttgggtcgggaaacattgtaaacaccttggtgagtgaaaatca 19945546  T
Q  231 ttg 233  Q
    |||    
T  19945545 ttg 19945543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 44303739 - 44303839
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||| ||||||||||| |  |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  44303739 cttgagaaatcaaaggaaacaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 44303836  T
Q  231 ttg 233  Q
    |||    
T  44303837 ttg 44303839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18852783 - 18852839
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||| ||||||||    
T  18852783 tcgttaagtatcactgataaggactggtcataccttgggtcagacgcagatcgtgac 18852839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 3439330 - 3439369
Alignment:
Q  68 cagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  3439330 cagaggaagactagtataaagtgttcttgtgcagatttga 3439369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 10929686 - 10929767
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| |||||||  ||| |||||||||||||| ||||||||||||  ||||| | ||||||||||    
T  10929686 cttgggaaatcaaaggaggtaactttagggtt--ggggtctttgattagagt-tctcttgggttgggaacattgtaaacaccttg 10929767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 232
Target Start/End: Complemental strand, 12702921 - 12702822
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | || | ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  12702921 cttgggaaatcaaaggaggtaaatttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 12702824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 43036308 - 43036391
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  43036308 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 43036391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18870177 - 18870233
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||  | ||||||||||||||||||||||||   ||||| ||||||||    
T  18870177 tcgttaagtatcactaataaggactggtcataccttgggtcagacgcagatcgtgac 18870233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 30143227 - 30143289
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg 196  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||    
T  30143227 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttg 30143289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 27647624 - 27647848
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagtataaagtgttcttgtgca 100  Q
    |||||||||||||||||||  |||||||| |  ||||||| ||||||| ||||||||  ||||||   ||||| || |||||||||||||||||||||||    
T  27647624 tcgttaagtatccttgatattgactggtcgtttcttgggtggtacgcagatcgtgacacgattgcaatagaggaagactagtataaagtgttcttgtgca 27647723  T
Q  101 gatttgannnnnnnnnnnnnnnnnnnnnnnncttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaa 200  Q
    |||||||                        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27647724 gatttgaagagagagttggaagagagagagacttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaa 27647823  T
Q  201 catgggaaacaccttgtagagagaa 225  Q
    ||||||||||||| |||||||||||    
T  27647824 catgggaaacaccatgtagagagaa 27647848  T

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Target: chr6; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 6027141 - 6027233
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6027141 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 6027233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 25421198 - 25421298
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  25421198 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 25421296  T
Q  232 tg 233  Q
    ||    
T  25421297 tg 25421298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 33342380 - 33342288
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33342380 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 33342288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 16554762 - 16554862
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  16554762 cttggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 16554860  T
Q  232 tg 233  Q
    ||    
T  16554861 tg 16554862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 16631318 - 16631418
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  16631318 cttggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 16631416  T
Q  232 tg 233  Q
    ||    
T  16631417 tg 16631418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 16653012 - 16653105
Alignment:
Q  139 aatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcattg 233  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  16653012 aatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattg 16653105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 16578793 - 16578693
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  16578793 cttggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacacgttgtaaagagagaatcat 16578695  T
Q  232 tg 233  Q
    ||    
T  16578694 tg 16578693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 16616587 - 16616687
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  16616587 cttggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacacgttgtaaagagagaatcat 16616685  T
Q  232 tg 233  Q
    ||    
T  16616686 tg 16616687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 34164751 - 34164843
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34164751 cttgggaaatcaaaggg-gaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 34164843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 34166973 - 34167065
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34166973 cttgggaaatcaaaggg-gaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 34167065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 411994 - 412094
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    |||| |||||||||||||| ||||||||||||||| || ||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  411994 cttgagaaatcaaagggagtaactctagggtttagagt-ctttgattagagcttctcttgggttgaaaacatgggaaacaccttgaagagagaaaatcat 412092  T
Q  232 tg 233  Q
    ||    
T  412093 tg 412094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 3073036 - 3072935
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||  ||||||||||| | ||||||||||||||||||| |||||||||||||    
T  3073036 cttgggaaatcaaagggagaaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatca 3072938  T
Q  231 ttg 233  Q
    |||    
T  3072937 ttg 3072935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 6097717 - 6097615
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| | |||||||| ||||||||||  ||| ||||||||    
T  6097717 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctctttggttgggaaacatggtaaacaccttggtgagtgaaaatca 6097618  T
Q  231 ttg 233  Q
    |||    
T  6097617 ttg 6097615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 2171814 - 2171713
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  2171814 cttgggaaatcaaagggagcaactctagggtttaggg-tctttgattagagtttctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 2171716  T
Q  231 ttg 233  Q
    |||    
T  2171715 ttg 2171713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 5266513 - 5266432
Alignment:
Q  4 ttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagtata 85  Q
    ||||||||||||||||||||||||||||||||||    | ||||||||||||||  |||||||||||||| || ||||||||    
T  5266513 ttaagtatccttgataaggactggtcataccttgaaacggacgcaaatcgtgacacgattgcttcagaggaagactagtata 5266432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5674386 - 5674442
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  5674386 tcgttaagtatccgtgataaggactggtcataccttgggacgtacgcaaatcgtgac 5674442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 31404957 - 31404856
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| |||||||||||||  |||||||||||| ||||||||||| |||||||| | ||||||||||  ||| ||||||||    
T  31404957 cttgggaaatcaaaggaggcaactttagggtttagggtcttttgattagagt-tctcttgggttggaaaacattgtaaacaccttggtgagtgaaaatca 31404859  T
Q  231 ttg 233  Q
    |||    
T  31404858 ttg 31404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34166823 - 34166879
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||    
T  34166823 tcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaatcgtgac 34166879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25420953 - 25421016
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattg 64  Q
    ||||||||||||||||||||||||||||| | |||||||  | |||||||||||||| ||||||    
T  25420953 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacatgattg 25421016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25421047 - 25421110
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattg 64  Q
    ||||||||||||||||||||||||||||| | |||||||  | |||||||||||||| ||||||    
T  25421047 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacatgattg 25421110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 16452612 - 16452512
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||  || |||| ||| |||||||| |||||||||||||| ||||||||||||| |||||| | ||||||||||  ||| ||||||||    
T  16452612 cttgggaaatcaaagtaagcaactttagagtttaggg-tctttgattagagt-tctcttgggttgagaaacattgtaaacaccttggtgagtgaaaatca 16452515  T
Q  231 ttg 233  Q
    |||    
T  16452514 ttg 16452512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13151006 - 13151062
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  13151006 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 13151062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16554610 - 16554666
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||| ||||||||    
T  16554610 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgac 16554666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16578945 - 16578889
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||| ||||||||    
T  16578945 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgac 16578889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16616435 - 16616491
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||| ||||||||    
T  16616435 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgac 16616491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16631166 - 16631222
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||| ||||||||    
T  16631166 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgac 16631222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16652853 - 16652909
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||| ||||||||    
T  16652853 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgac 16652909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33342531 - 33342475
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  33342531 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 33342475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34164601 - 34164657
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  34164601 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 34164657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 5406481 - 5406381
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||| ||||| | |||||| | ||||||||||  ||| ||||||||    
T  5406481 cttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tctctcgggttgggaaacattgtaaacaccttggtgagtgaaaatca 5406384  T
Q  231 ttg 233  Q
    |||    
T  5406383 ttg 5406381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 5410806 - 5410706
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||| ||||| | |||||| | ||||||||||  ||| ||||||||    
T  5410806 cttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tctctcgggttgggaaacattgtaaacaccttggtgagtgaaaatca 5410709  T
Q  231 ttg 233  Q
    |||    
T  5410708 ttg 5410706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 30834819 - 30834719
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||| ||||||||||| || |||| ||||||||| || |||||||||||||| ||||||||||||| |||||| | |||||||| |  ||| ||||||||    
T  30834819 cttgagaaatcaaaggaagcaactttagggtttatgg-tctttgattagagt-tctcttgggttgagaaacattgtaaacacctcggtgagtgaaaatca 30834722  T
Q  231 ttg 233  Q
    |||    
T  30834721 ttg 30834719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6026990 - 6027046
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||| |||| | |||||||  | ||||||||||||||    
T  6026990 tcgttaagtatccttgataaggaccggtcgttccttgggacggacgcaaatcgtgac 6027046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6136391 - 6136335
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | | ||||||||||||    
T  6136391 tcgttaagtatccttgataaggactggtcgttccttgggacggaagcaaatcgtgac 6136335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 16554697 - 16554736
Alignment:
Q  68 cagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  16554697 cagaggaaggctagtataaattgttcttgtgcagatttga 16554736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 16631253 - 16631292
Alignment:
Q  68 cagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  16631253 cagaggaaggctagtataaattgttcttgtgcagatttga 16631292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 16652940 - 16652979
Alignment:
Q  68 cagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  16652940 cagaggaaggctagtataaattgttcttgtgcagatttga 16652979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 411843 - 411881
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttggg 39  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  411843 tcgttaagtttccatgataaggactggtcataccttggg 411881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3073186 - 3073148
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttggg 39  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  3073186 tcgttaagtttccatgataaggactggtcataccttggg 3073148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 5413675 - 5413575
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||| ||||| | |||||| | |||||| |||  ||| ||||||||    
T  5413675 cttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tctctcgggttgggaaacattgtaaacacattggtgagtgaaaatca 5413578  T
Q  231 ttg 233  Q
    |||    
T  5413577 ttg 5413575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6097850 - 6097741
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcgtgacgtgattgcttcagagggaggctagta-taaagtgttcttgt 97  Q
    ||||||||| ||| ||||||||||||||| ||||| |||  |||||||  |||||||||  ||||   |||| || || |||||| | ||||||||||||    
T  6097850 tcgttaagtttccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacacgattttatcaggggaagactagtatttaagtgttcttgt 6097751  T
Q  98 gcagatttga 107  Q
    ||||||||||    
T  6097750 gcagatttga 6097741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 5674452 - 5674512
Alignment:
Q  48 aaatcgtgacgtgattgcttcagagggaggctagtat--aaagtgttcttgtgcagatttg 106  Q
    ||||||||||  |||||  ||||||| ||||||||||  ||||||||||||||||||||||    
T  5674452 aaatcgtgacacgattgtatcagaggaaggctagtatttaaagtgttcttgtgcagatttg 5674512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 6716392 - 6716493
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  6716392 cttgggaaatcaaagggagtaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 6716491  T
Q  232 tg 233  Q
    ||    
T  6716492 tg 6716493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 6718576 - 6718677
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  6718576 cttgggaaatcaaagggagtaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 6718675  T
Q  232 tg 233  Q
    ||    
T  6718676 tg 6718677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 54635017 - 54635118
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  54635017 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 54635116  T
Q  232 tg 233  Q
    ||    
T  54635117 tg 54635118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 3617342 - 3617442
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  3617342 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 3617440  T
Q  232 tg 233  Q
    ||    
T  3617441 tg 3617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 4601019 - 4600927
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4601019 cttgggaaatcaaaggga-aagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 4600927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 45282875 - 45282976
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  45282875 cttggggaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgcaaagagagaatcat 45282974  T
Q  232 tg 233  Q
    ||    
T  45282975 tg 45282976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 4598798 - 4598706
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4598798 cttgggaaatcaaaggga-aagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccctgtagagagaa 4598706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 10209068 - 10209160
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10209068 cttgggaaatcaaaggga-aagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 10209160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 10211288 - 10211380
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10211288 cttgggaaatcaaaggga-aagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 10211380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 25637321 - 25637413
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637321 cttgggaaatcaaaggg-gtatctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 25637413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 10056112 - 10056204
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10056112 cttgggaaatcaaaggg-gaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 10056204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 10058334 - 10058426
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10058334 cttgggaaatcaaaggg-gaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 10058426  T

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Target: chr3; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 10060556 - 10060648
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10060556 cttgggaaatcaaaggg-gaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 10060648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 10062778 - 10062870
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10062778 cttgggaaatcaaaggg-gaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 10062870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 10065000 - 10065092
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10065000 cttgggaaatcaaaggg-gaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 10065092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 10067222 - 10067314
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10067222 cttgggaaatcaaaggg-gaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaa 10067314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 2671221 - 2671328
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagtataaa--gtgttcttgtg 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| || |||||||| |  |||||||||||    
T  2671221 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtg 2671320  T
Q  99 cagatttg 106  Q
    ||||||||    
T  2671321 cagatttg 2671328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 800983 - 801084
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||||  ||||||||||||  ||||||||||||||||||| |||||||||||||    
T  800983 cttgggaaatcaaaggaagaaactctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatca 801081  T
Q  231 ttg 233  Q
    |||    
T  801082 ttg 801084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8477846 - 8477790
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8477846 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 8477790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 23200420 - 23200319
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  23200420 cttgggaaatcaaagggagcaactctagggtttaggg-tctttgattagagtttctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 23200322  T
Q  231 ttg 233  Q
    |||    
T  23200321 ttg 23200319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 23198221 - 23198120
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  23198221 cttggaaaatcaaagggagcaactctagggtttaggg-tctttgattagagtttctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 23198123  T
Q  231 ttg 233  Q
    |||    
T  23198122 ttg 23198120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 5258427 - 5258327
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  5258427 cttgagaaatcaaagggagaaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 5258330  T
Q  231 ttg 233  Q
    |||    
T  5258329 ttg 5258327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 9636410 - 9636309
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||||||||| ||||||||||| | ||| || | ||||||||||  ||| ||||||||    
T  9636410 cttgggaaatcaaaggaagaaactttagggtttaggg-tctttgattagagtctctcttgggttgggaaatattgtaaacaccttggtgagtgaaaatca 9636312  T
Q  231 ttg 233  Q
    |||    
T  9636311 ttg 9636309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10208935 - 10209042
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagta-taaagtgttcttgtgc 99  Q
    ||||||| ||||||||||||||||||||| | |||||||  | ||||||||||||||  |||||   |||||| || |||||| | ||||||||||||||    
T  10208935 tcgttaaatatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgc 10209034  T
Q  100 agatttga 107  Q
    ||||||||    
T  10209035 agatttga 10209042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8738679 - 8738740
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgat 62  Q
    ||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||    
T  8738679 tcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtgacatgat 8738740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9090917 - 9090978
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgat 62  Q
    ||||||||||||||||||||||||||||||||||||||   | |||||||||||||| ||||    
T  9090917 tcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtgacatgat 9090978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10058184 - 10058240
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||    
T  10058184 tcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaatcgtgac 10058240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10060406 - 10060462
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||    
T  10060406 tcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaatcgtgac 10060462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10062628 - 10062684
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||    
T  10062628 tcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaatcgtgac 10062684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10064850 - 10064906
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||    
T  10064850 tcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaatcgtgac 10064906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 54634933 - 54634992
Alignment:
Q  48 aaatcgtgacgtgattgcttcagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    ||||||||||  ||||||  |||||| |||||||||||||||||||||||||||||||||    
T  54634933 aaatcgtgacacgattgcaacagaggaaggctagtataaagtgttcttgtgcagatttga 54634992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 5260606 - 5260506
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  5260606 cttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 5260509  T
Q  231 ttg 233  Q
    |||    
T  5260508 ttg 5260506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4598950 - 4598894
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  4598950 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 4598894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4601171 - 4601115
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  4601171 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 4601115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7167726 - 7167670
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||||||||||||||    
T  7167726 tcgttaagtatcactgataaggactggtcataccttgggtcagacgcaaatcgtgac 7167670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10055962 - 10056018
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  10055962 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 10056018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10067072 - 10067128
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  10067072 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 10067128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10211135 - 10211191
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  10211135 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 10211191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25637169 - 25637225
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  25637169 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 25637225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 45282722 - 45282778
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||| ||||||||    
T  45282722 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgac 45282778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 54634866 - 54634922
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||| ||||    
T  54634866 tcgttaagtatccttgataaggactggtcttttcttgggtggtacgcaaatcatgac 54634922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 45282809 - 45282848
Alignment:
Q  68 cagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  45282809 cagaggaaggctagtataaagtgttcttgtgcagatttga 45282848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 40372412 - 40372446
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcatacct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  40372412 tcgttaagtatccttgataaggactggtcatacct 40372446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 45095050 - 45095150
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||| |  | |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  45095050 cttgggaaatcaaaagaggcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 45095147  T
Q  231 ttg 233  Q
    |||    
T  45095148 ttg 45095150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6716241 - 6716297
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||  ||||||||    
T  6716241 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcggatcgtgac 6716297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6718425 - 6718481
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||  ||||||||    
T  6718425 tcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcggatcgtgac 6718481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27352237 - 27352293
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||| ||||  |||||||||||||||||||||||||  | ||||||||||||||    
T  27352237 tcgttaattatcactgataaggactggtcataccttgggacggacgcaaatcgtgac 27352293  T

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Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 6716328 - 6716367
Alignment:
Q  68 cagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  6716328 cagaggaagactagtataaagtgttcttgtgcagatttga 6716367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 6718512 - 6718551
Alignment:
Q  68 cagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  6718512 cagaggaagactagtataaagtgttcttgtgcagatttga 6718551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 7782424 - 7782375
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagag 182  Q
    ||||||||||||||||||| ||||||||| ||||| | |||||||||||||    
T  7782424 cttgggaaatcaaagggagtaactctaggttttagag-tctttgattagag 7782375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 32744709 - 32744609
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | |||||| |||  ||| ||||||||    
T  32744709 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacacattggtgagtgaaaatca 32744612  T
Q  231 ttg 233  Q
    |||    
T  32744611 ttg 32744609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 39153644 - 39153561
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  39153644 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 39153561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3617190 - 3617246
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||| | |||||| | |||||||  | ||||||||||||||    
T  3617190 tcgttaagtatccttgataacggctggtcgttccttgggacggacgcaaatcgtgac 3617246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 7762151 - 7762213
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg 196  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||    
T  7762151 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttg 7762213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28503475 - 28503530
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||| |||| |||||||||   ||||||||||||||    
T  28503475 tcgttaagtatccctgataaggacttgtca-accttgggtcagacgcaaatcgtgac 28503530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 37408344 - 37408406
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg 196  Q
    ||||||||||||||||  | |||| ||||||||| || |||||||||||||| ||||||||||||    
T  37408344 cttgggaaatcaaaggaggcaactttagggtttatgg-tctttgattagagt-tctcttgggttg 37408406  T

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Target: scaffold0674 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 4000 - 3908
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4000 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 3908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4154 - 4098
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  4154 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 4098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 2878 - 2786
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2878 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 2786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3029 - 2973
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||| ||||||||||||||||| | |||||||  | ||||||||||||||    
T  3029 tcgttaagtattcttgataaggactggtcgttccttgggacggacgcaaatcgtgac 2973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 6167 - 6259
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6167 cttgggaaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 6259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6016 - 6072
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  6016 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 6072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 7122575 - 7122675
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  7122575 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 7122673  T
Q  232 tg 233  Q
    ||    
T  7122674 tg 7122675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 7124794 - 7124894
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcat 231  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  7124794 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcat 7124892  T
Q  232 tg 233  Q
    ||    
T  7124893 tg 7124894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 8395498 - 8395590
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8395498 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 8395590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 5138183 - 5138275
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5138183 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaataccttgtagagagaa 5138275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 8393291 - 8393381
Alignment:
Q  134 tgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8393291 tgggaaatcaaaggg-gaagctctagggtttatggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa 8393381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 5135957 - 5136050
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagagaa 225  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  5135957 cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaataccttgtagagagaa 5136050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 31495593 - 31495492
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| ||||||||||||||  || ||||||||||||  ||||||||||||  ||||||||||||||||||| |||||||||||||    
T  31495593 cttgggaaatcaaagggagtaactctagggtttatagt-ctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatca 31495495  T
Q  231 ttg 233  Q
    |||    
T  31495494 ttg 31495492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 29761102 - 29760995
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacgtgattgcttcagagggaggctagtataaa--gtgttcttgtg 98  Q
    ||||||||||||||||||||||||||||||||||||||   | |||||||||||| |  |||| ||||||||| || |||||||| |  |||||||||||    
T  29761102 tcgttaagtatccttgataaggactggtcataccttggtacggacgcaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtg 29761003  T
Q  99 cagatttg 106  Q
    ||||||||    
T  29761002 cagatttg 29760995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 13992569 - 13992468
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  13992569 cttgggaaatcaaaggtagcaactttagggtttaggg-tctttgattagagtctctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 13992471  T
Q  231 ttg 233  Q
    |||    
T  13992470 ttg 13992468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7122423 - 7122479
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||    
T  7122423 tcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgac 7122479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 8393225 - 8393264
Alignment:
Q  68 cagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  8393225 cagaggaaggctagtataaagtgttcttgtgcagatttga 8393264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 8395434 - 8395473
Alignment:
Q  68 cagagggaggctagtataaagtgttcttgtgcagatttga 107  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  8395434 cagaggaaggctagtataaagtgttcttgtgcagatttga 8395473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 24742421 - 24742387
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcatacct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  24742421 tcgttaagtatccttgataaggactggtcatacct 24742387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 5429564 - 5429647
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    |||||||||||||||| || |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  5429564 cttgggaaatcaaaggaagtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 5429647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5135806 - 5135862
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||| |||| | |||||||  | ||||||||||||||    
T  5135806 tcgttaagtatccttgataaggaccggtcgttccttgggacggacgcaaatcgtgac 5135862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5138032 - 5138088
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    |||||||||||||||||||||||| |||| | |||||||  | ||||||||||||||    
T  5138032 tcgttaagtatccttgataaggaccggtcgttccttgggacggacgcaaatcgtgac 5138088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8393138 - 8393194
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||||||| |  ||||||| ||||||| ||||||||    
T  8393138 tcgttaagtatccgtgataaggactggtcttttcttgggtggtacgcagatcgtgac 8393194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8395347 - 8395403
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||||||| |  ||||||| ||||||| ||||||||    
T  8395347 tcgttaagtatccgtgataaggactggtcgtttcttgggtggtacgcagatcgtgac 8395403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 30000088 - 29999992
Alignment:
Q  132 cttgggaaatcaaagggaga-aactctagggtttagggttctttgattagagtatctcttggg-ttgaaaacatgggaaacaccttgtagagagaaaatc 229  Q
    |||||||||||||| ||||| |||| |||||||||||| |||||||||||||| ||||||||| ||| |||||| | ||||||||||  ||| |||||||    
T  30000088 cttgggaaatcaaa-ggagacaactttagggtttaggg-tctttgattagagt-tctcttgggtttggaaacattgtaaacaccttggtgagtgaaaatc 29999992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 56178919 - 56178819
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||  | |||| ||||||| | ||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| ||||||||    
T  56178919 cttgggaaatcaaaggaggtaactttagggttgaaggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 56178822  T
Q  231 ttg 233  Q
    |||    
T  56178821 ttg 56178819  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 48142927 - 48143010
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  48142927 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 48143010  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 52082940 - 52082857
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg 216  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| | ||||||||||    
T  52082940 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 52082857  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 7124645 - 7124673
Alignment:
Q  1 tcgttaagtatccttgataaggactggtc 29  Q
    |||||||||||||||||||||||||||||    
T  7124645 tcgttaagtatccttgataaggactggtc 7124673  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 51520894 - 51520839
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| |||||||||||| || ||||||||||   ||||||||||||||    
T  51520894 tcgttaagtatccctgataaggactgatc-taccttgggtcagacgcaaatcgtgac 51520839  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 52093947 - 52093885
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg 196  Q
    ||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||    
T  52093947 cttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttg 52093885  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 56141668 - 56141723
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgac 57  Q
    ||||||||||||| ||||||||||||||| ||||||||||   | ||||||||||||    
T  56141668 tcgttaagtatccctgataaggactggtc-taccttgggtcagatgcaaatcgtgac 56141723  T

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Target: scaffold0002 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 434418 - 434518
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| |||||||||| ||| ||||||  ||| ||||||||    
T  434418 cttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttggaaaacatggtaaataccttggtgagtgaaaatca 434515  T
Q  231 ttg 233  Q
    |||    
T  434516 ttg 434518  T

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Target: scaffold1519 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 802 - 902
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    |||||||||||||||| || |||| |||||||||||| |||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| ||||||||    
T  802 cttgggaaatcaaaggcagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatca 899  T
Q  231 ttg 233  Q
    |||    
T  900 ttg 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 11445 - 11344
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaaaatca 230  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||||||  ||||||||||| | |||||| | ||||||||||  ||| | ||||||    
T  11445 cttgggaaatcaaagggagtaactctagggtttatgg-tctttgattagagcttctcttgggttgggaaacattgtaaacaccttggtgagtgtaaatca 11347  T
Q  231 ttg 233  Q
    |||    
T  11346 ttg 11344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 9019 - 8956
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg 196  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||||||  ||||||||||||    
T  9019 cttgggaaatcaaagggagtaactctaggctttaggg-tctttgattagagcttctcttgggttg 8956  T

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Target: scaffold0491; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 9152 - 9045
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcgtgacgtgattgcttcagagggaggctagta-taaagtgttcttgt 97  Q
    ||||||||| ||| ||||||||||||||| |||||||||  |||||||  |||||||||  ||||   |||| || ||||||||| | ||||||||||||    
T  9152 tcgttaagtttccatgataaggactggtcgtaccttgggacgtacgcaccaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgt 9053  T
Q  98 gcagattt 105  Q
    ||||||||    
T  9052 gcagattt 9045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 22229 - 22286
Alignment:
Q  132 cttgggaaatcaaagggagaaactctagggtttagggttctttgattagagtatctctt 190  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  22229 cttgggaaatcaaagggagcaactctagggtttaggg-tctttgattagagtttctctt 22286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 17588 - 17695
Alignment:
Q  1 tcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgtgacgtgattgcttcagagggaggctagta-taaagtgttcttgt 97  Q
    ||||||||||||||||||||||| ||||| ||||||| |  |||||  | |||||||||  ||||   |||| || ||||||||| | ||||||||||||    
T  17588 tcgttaagtatccttgataaggattggtcgtaccttgtgacgtacgttccaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgt 17687  T
Q  98 gcagattt 105  Q
    ||||||||    
T  17688 gcagattt 17695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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