View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6876A_low_324 (Length: 235)
Name: NF6876A_low_324
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6876A_low_324 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 34092835 - 34093069
Alignment:
| Q |
1 |
gacttttctcaatgagaaactttgccaaagtcagattgatattgaataattggctaaacaaatctcacattatatatacacaaccacttgaaataaaaga |
100 |
Q |
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| T |
34092835 |
gacttttctcaataagaaactttgccaaagtcagattgatattgaataattggcaaaacaaatctcacattatatatacacaaccacttgaaataaaaga |
34092934 |
T |
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| Q |
101 |
aacaattacattgtatgcaaatcattatcgttggctattagagcatatattaattcaaagatgaaaaagacattggtagctagaaaaatgaagaagaggc |
200 |
Q |
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| T |
34092935 |
aacaattacattgtatgcaaatcattatcgttggctattagagcatatattaattcaaagatgaaaaagacattggtagctagaaaaatgaagaagaggc |
34093034 |
T |
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| Q |
201 |
attaggttaggtatatgtgatgatgtccatctcat |
235 |
Q |
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||||||||||||| ||||||||||||||| ||||| |
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| T |
34093035 |
attaggttaggtaaatgtgatgatgtccacctcat |
34093069 |
T |
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