View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6876A_low_364 (Length: 229)

Name: NF6876A_low_364
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6876A_low_364
NF6876A_low_364
[»] chr8 (31 HSPs)
chr8 (1-157)||(3439088-3439243)
chr8 (14-157)||(2627318-2627462)
chr8 (1-144)||(33037299-33037443)
chr8 (1-144)||(4759546-4759690)
chr8 (1-144)||(10683751-10683895)
chr8 (1-144)||(30656126-30656270)
chr8 (33-157)||(31042908-31043032)
chr8 (1-144)||(36979858-36980002)
chr8 (1-157)||(1261414-1261571)
chr8 (1-144)||(6311779-6311923)
chr8 (1-144)||(18852639-18852783)
chr8 (17-160)||(26288376-26288520)
chr8 (17-160)||(26301633-26301777)
chr8 (17-160)||(26313627-26313771)
chr8 (1-144)||(18870033-18870177)
chr8 (1-144)||(7289439-7289584)
chr8 (14-144)||(39784337-39784468)
chr8 (1-157)||(7412795-7412952)
chr8 (1-157)||(15290143-15290300)
chr8 (1-157)||(15470512-15470669)
chr8 (1-157)||(42575752-42575909)
chr8 (1-144)||(25327676-25327820)
chr8 (1-94)||(25689604-25689697)
chr8 (99-160)||(25689558-25689618)
chr8 (1-94)||(10688661-10688755)
chr8 (99-144)||(10688630-10688675)
chr8 (99-144)||(5701964-5702009)
chr8 (1-157)||(35745822-35745979)
chr8 (99-149)||(4456575-4456625)
chr8 (80-114)||(11383406-11383440)
chr8 (99-143)||(23799105-23799149)
[»] chr6 (51 HSPs)
chr6 (1-158)||(16578945-16579102)
chr6 (1-158)||(16616278-16616435)
chr6 (1-157)||(27647467-27647624)
chr6 (1-157)||(16554454-16554610)
chr6 (1-157)||(16631010-16631166)
chr6 (1-159)||(411683-411843)
chr6 (1-157)||(2171947-2172104)
chr6 (14-157)||(3073199-3073343)
chr6 (31-159)||(6097860-6097988)
chr6 (1-144)||(30125030-30125174)
chr6 (1-157)||(22709488-22709645)
chr6 (1-159)||(5674227-5674386)
chr6 (1-157)||(25420797-25420953)
chr6 (1-159)||(6136391-6136549)
chr6 (1-144)||(11857411-11857555)
chr6 (32-157)||(26253589-26253714)
chr6 (1-144)||(14741938-14742082)
chr6 (1-144)||(22010201-22010345)
chr6 (1-149)||(34166673-34166823)
chr6 (1-149)||(13150856-13151006)
chr6 (1-157)||(33342531-33342688)
chr6 (1-157)||(6026834-6026990)
chr6 (1-161)||(34164440-34164601)
chr6 (1-94)||(16652759-16652853)
chr6 (1-144)||(6438927-6439071)
chr6 (1-157)||(23896800-23896957)
chr6 (77-161)||(34151824-34151907)
chr6 (1-94)||(5266516-5266610)
chr6 (99-157)||(16652716-16652773)
chr6 (99-144)||(5266596-5266641)
chr6 (99-144)||(14737097-14737142)
chr6 (1-157)||(16839174-16839331)
chr6 (1-60)||(28155167-28155227)
chr6 (1-157)||(33329932-33330089)
chr6 (82-144)||(5343990-5344052)
chr6 (1-158)||(5756950-5757108)
chr6 (1-48)||(25421000-25421047)
chr6 (101-144)||(28155102-28155145)
chr6 (1-94)||(14737128-14737222)
chr6 (99-144)||(5016981-5017026)
chr6 (1-158)||(6005850-6006008)
chr6 (99-144)||(31085958-31086003)
chr6 (14-46)||(16554659-16554691)
chr6 (14-46)||(16578864-16578896)
chr6 (14-46)||(16616484-16616516)
chr6 (14-46)||(16631215-16631247)
chr6 (14-46)||(16652902-16652934)
chr6 (1-51)||(5343908-5343959)
chr6 (99-150)||(5571755-5571806)
chr6 (14-48)||(11857331-11857365)
chr6 (104-144)||(21272474-21272514)
[»] chr5 (55 HSPs)
chr5 (1-158)||(22536696-22536853)
chr5 (1-157)||(29719965-29720123)
chr5 (1-157)||(10592844-10592999)
chr5 (14-157)||(9789665-9789809)
chr5 (1-157)||(29722152-29722310)
chr5 (14-157)||(18442089-18442233)
chr5 (14-157)||(26177466-26177610)
chr5 (1-159)||(40379676-40379834)
chr5 (33-157)||(29752266-29752390)
chr5 (1-157)||(16546216-16546372)
chr5 (1-157)||(40381889-40382045)
chr5 (33-157)||(29751600-29751724)
chr5 (1-144)||(30631792-30631936)
chr5 (1-158)||(24136327-24136485)
chr5 (1-157)||(16543994-16544150)
chr5 (14-157)||(16407641-16407785)
chr5 (1-144)||(27450253-27450397)
chr5 (1-144)||(1456650-1456794)
chr5 (1-144)||(27445410-27445554)
chr5 (32-157)||(15465000-15465125)
chr5 (1-144)||(43599161-43599306)
chr5 (1-144)||(43604653-43604798)
chr5 (1-144)||(43610145-43610290)
chr5 (18-157)||(26170357-26170497)
chr5 (14-157)||(16409077-16409221)
chr5 (1-144)||(29402562-29402706)
chr5 (1-149)||(25077713-25077862)
chr5 (1-149)||(25135682-25135831)
chr5 (1-157)||(9352807-9352964)
chr5 (32-157)||(36931843-36931968)
chr5 (1-144)||(15045124-15045267)
chr5 (3-144)||(28807088-28807230)
chr5 (82-150)||(37556131-37556199)
chr5 (1-150)||(37560953-37561103)
chr5 (107-157)||(35388196-35388246)
chr5 (14-94)||(31180706-31180787)
chr5 (99-144)||(31180773-31180818)
chr5 (99-144)||(43592797-43592842)
chr5 (1-157)||(2785806-2785963)
chr5 (1-157)||(33768615-33768772)
chr5 (1-157)||(33791747-33791904)
chr5 (99-158)||(14520796-14520855)
chr5 (1-94)||(43592716-43592811)
chr5 (14-158)||(31396488-31396633)
chr5 (1-74)||(38219873-38219947)
chr5 (14-48)||(43592636-43592670)
chr5 (14-48)||(43599081-43599115)
chr5 (14-48)||(43604573-43604607)
chr5 (14-48)||(43610065-43610099)
chr5 (14-46)||(10593048-10593080)
chr5 (99-149)||(11916452-11916502)
chr5 (14-48)||(27445330-27445364)
chr5 (14-48)||(27450173-27450207)
chr5 (14-48)||(29751507-29751541)
chr5 (99-140)||(12083667-12083708)
[»] chr3 (68 HSPs)
chr3 (1-158)||(6716084-6716241)
chr3 (1-157)||(54634710-54634866)
chr3 (14-157)||(800685-800829)
chr3 (1-157)||(1306447-1306604)
chr3 (1-144)||(8477846-8477990)
chr3 (1-144)||(40372268-40372412)
chr3 (1-157)||(3617034-3617190)
chr3 (1-144)||(22172674-22172818)
chr3 (14-157)||(23198386-23198530)
chr3 (14-157)||(23200585-23200729)
chr3 (31-157)||(7782586-7782712)
chr3 (1-158)||(25637012-25637169)
chr3 (1-159)||(26928078-26928237)
chr3 (1-157)||(33386137-33386294)
chr3 (1-144)||(7167726-7167870)
chr3 (1-144)||(18656872-18657017)
chr3 (14-157)||(37408036-37408179)
chr3 (1-94)||(6718331-6718425)
chr3 (1-94)||(45282628-45282722)
chr3 (1-157)||(4598950-4599107)
chr3 (1-157)||(4601171-4601328)
chr3 (14-158)||(37726155-37726300)
chr3 (1-144)||(28501164-28501308)
chr3 (17-144)||(28503331-28503459)
chr3 (1-149)||(10055812-10055962)
chr3 (1-149)||(10058034-10058184)
chr3 (1-149)||(10060256-10060406)
chr3 (1-149)||(10062478-10062628)
chr3 (1-149)||(10064700-10064850)
chr3 (1-149)||(10066922-10067072)
chr3 (1-157)||(27453424-27453581)
chr3 (1-140)||(27352097-27352237)
chr3 (1-157)||(10208778-10208935)
chr3 (1-110)||(2671111-2671221)
chr3 (1-157)||(10210978-10211135)
chr3 (99-159)||(45282583-45282642)
chr3 (1-159)||(2672416-2672575)
chr3 (99-157)||(6718288-6718345)
chr3 (97-157)||(32143868-32143928)
chr3 (1-94)||(32143790-32143884)
chr3 (1-150)||(2676581-2676731)
chr3 (97-157)||(27974433-27974493)
chr3 (1-94)||(8738585-8738679)
chr3 (1-94)||(9090823-9090917)
chr3 (1-94)||(27986001-27986095)
chr3 (97-157)||(27985957-27986017)
chr3 (80-144)||(36029640-36029704)
chr3 (99-147)||(40734084-40734132)
chr3 (98-157)||(40845220-40845279)
chr3 (99-144)||(8738554-8738599)
chr3 (99-144)||(9090792-9090837)
chr3 (99-144)||(16264896-16264941)
chr3 (99-144)||(21711768-21711813)
chr3 (99-144)||(27027273-27027318)
chr3 (99-144)||(30709271-30709316)
chr3 (79-158)||(27038588-27038667)
chr3 (82-144)||(32475997-32476059)
chr3 (82-144)||(32480855-32480917)
chr3 (99-157)||(39032017-39032075)
chr3 (1-147)||(40735015-40735161)
chr3 (1-51)||(32475915-32475966)
chr3 (1-51)||(32480773-32480824)
chr3 (106-144)||(1730921-1730959)
chr3 (14-48)||(22172864-22172898)
chr3 (99-144)||(35926057-35926101)
chr3 (99-144)||(40592257-40592302)
chr3 (99-140)||(48438782-48438823)
chr3 (14-46)||(6716290-6716322)
[»] chr7 (44 HSPs)
chr7 (1-157)||(24789426-24789583)
chr7 (1-157)||(20343500-20343656)
chr7 (1-144)||(21640267-21640411)
chr7 (14-157)||(43504577-43504721)
chr7 (1-157)||(18392624-18392780)
chr7 (14-158)||(48408397-48408542)
chr7 (14-157)||(39730933-39731077)
chr7 (1-157)||(18409242-18409399)
chr7 (1-157)||(18414118-18414275)
chr7 (1-157)||(21646486-21646643)
chr7 (1-144)||(2058449-2058592)
chr7 (1-144)||(20357040-20357184)
chr7 (1-158)||(32060732-32060889)
chr7 (1-157)||(6592765-6592921)
chr7 (1-158)||(6594981-6595138)
chr7 (1-144)||(12406701-12406845)
chr7 (1-160)||(25767389-25767543)
chr7 (1-150)||(21811745-21811895)
chr7 (17-144)||(4873581-4873709)
chr7 (78-161)||(1562509-1562591)
chr7 (4-113)||(1532947-1533057)
chr7 (1-144)||(24023831-24023975)
chr7 (1-157)||(47264110-47264267)
chr7 (14-157)||(2479816-2479960)
chr7 (83-157)||(1532884-1532958)
chr7 (54-144)||(12397390-12397480)
chr7 (1-144)||(31109082-31109227)
chr7 (80-159)||(44847617-44847696)
chr7 (1-58)||(18389188-18389246)
chr7 (51-157)||(21983761-21983867)
chr7 (14-158)||(21989388-21989532)
chr7 (1-144)||(16880504-16880648)
chr7 (1-144)||(16885359-16885503)
chr7 (100-157)||(18390506-18390562)
chr7 (82-144)||(24260833-24260895)
chr7 (99-144)||(79955-80000)
chr7 (1-48)||(1562431-1562479)
chr7 (1-51)||(24260926-24260977)
chr7 (80-114)||(4509335-4509369)
chr7 (80-114)||(4511177-4511211)
chr7 (80-114)||(6431467-6431501)
chr7 (80-114)||(14070348-14070382)
chr7 (80-114)||(14380376-14380410)
chr7 (98-143)||(49092237-49092282)
[»] chr1 (29 HSPs)
chr1 (1-157)||(20622664-20622821)
chr1 (1-157)||(9036003-9036159)
chr1 (1-157)||(40281958-40282116)
chr1 (1-157)||(21053540-21053697)
chr1 (14-157)||(9986785-9986929)
chr1 (1-157)||(19365768-19365925)
chr1 (1-157)||(19360912-19361069)
chr1 (32-157)||(24202251-24202376)
chr1 (14-159)||(51764988-51765134)
chr1 (1-158)||(44203217-44203374)
chr1 (1-149)||(41391030-41391178)
chr1 (1-144)||(44023389-44023533)
chr1 (32-157)||(13604095-13604220)
chr1 (1-144)||(25439411-25439555)
chr1 (1-144)||(39445926-39446070)
chr1 (3-144)||(25444604-25444746)
chr1 (1-144)||(1054526-1054670)
chr1 (1-94)||(24793709-24793803)
chr1 (80-150)||(21536119-21536189)
chr1 (99-144)||(24793678-24793723)
chr1 (14-140)||(26644390-26644517)
chr1 (99-161)||(3282273-3282335)
chr1 (99-149)||(41398764-41398814)
chr1 (99-144)||(13598967-13599012)
chr1 (1-76)||(24786905-24786981)
chr1 (99-143)||(37070334-37070378)
chr1 (1-94)||(41398685-41398778)
chr1 (99-140)||(16124197-16124238)
chr1 (79-111)||(1192296-1192328)
[»] chr4 (42 HSPs)
chr4 (14-157)||(31495758-31495902)
chr4 (1-157)||(13992722-13992879)
chr4 (1-144)||(24742421-24742565)
chr4 (1-157)||(28467977-28468134)
chr4 (1-157)||(8392982-8393138)
chr4 (1-144)||(9223911-9224055)
chr4 (1-144)||(51520894-51521038)
chr4 (1-149)||(7122274-7122423)
chr4 (1-149)||(7124496-7124645)
chr4 (1-144)||(5733090-5733235)
chr4 (1-144)||(56141523-56141668)
chr4 (1-144)||(9228698-9228842)
chr4 (1-157)||(8395191-8395347)
chr4 (32-158)||(31985126-31985252)
chr4 (1-161)||(3814450-3814609)
chr4 (1-144)||(18856153-18856297)
chr4 (158-229)||(44882122-44882193)
chr4 (1-158)||(5135648-5135806)
chr4 (1-157)||(5137875-5138032)
chr4 (1-144)||(45347329-45347473)
chr4 (1-116)||(18712295-18712411)
chr4 (41-144)||(18860406-18860509)
chr4 (32-158)||(5148177-5148303)
chr4 (1-94)||(29761102-29761196)
chr4 (99-160)||(29761182-29761242)
chr4 (173-229)||(44864243-44864299)
chr4 (97-157)||(5143807-5143867)
chr4 (96-144)||(8689049-8689097)
chr4 (177-229)||(44849988-44850040)
chr4 (99-144)||(16628358-16628403)
chr4 (99-144)||(38151923-38151968)
chr4 (100-144)||(3778116-3778160)
chr4 (98-144)||(5268704-5268750)
chr4 (99-144)||(6742901-6742946)
chr4 (99-144)||(10047932-10047977)
chr4 (99-140)||(16622783-16622824)
chr4 (14-46)||(8393187-8393219)
chr4 (14-46)||(8395396-8395428)
chr4 (1-93)||(45356861-45356954)
chr4 (99-144)||(36314716-36314761)
chr4 (99-144)||(36328925-36328970)
chr4 (99-144)||(54867745-54867790)
[»] scaffold0491 (2 HSPs)
scaffold0491 (14-157)||(9165-9308)
scaffold0491 (14-161)||(11610-11757)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-158)||(17430-17588)
[»] chr2 (26 HSPs)
chr2 (14-157)||(6266274-6266418)
chr2 (1-158)||(3492220-3492378)
chr2 (1-157)||(30832921-30833078)
chr2 (1-144)||(9295874-9296018)
chr2 (1-158)||(25410109-25410267)
chr2 (1-144)||(14291969-14292113)
chr2 (14-158)||(4484779-4484924)
chr2 (1-144)||(11098399-11098543)
chr2 (14-157)||(32289148-32289292)
chr2 (13-158)||(12647823-12647968)
chr2 (34-157)||(40739334-40739457)
chr2 (1-144)||(39811489-39811633)
chr2 (33-161)||(32247229-32247356)
chr2 (79-144)||(44310483-44310548)
chr2 (97-158)||(28258668-28258729)
chr2 (99-144)||(8389636-8389681)
chr2 (97-144)||(36757430-36757477)
chr2 (99-161)||(33528093-33528155)
chr2 (99-144)||(10706738-10706783)
chr2 (99-144)||(21630511-21630556)
chr2 (99-144)||(39483443-39483488)
chr2 (103-159)||(33118696-33118752)
chr2 (105-144)||(20522794-20522833)
chr2 (1-94)||(28258713-28258807)
chr2 (14-47)||(7450869-7450902)
chr2 (99-144)||(23077957-23078002)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-157)||(21939-22096)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-157)||(3029-3185)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-157)||(5859-6016)
[»] scaffold0140 (1 HSPs)
scaffold0140 (32-157)||(7911-8036)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-157)||(4154-4310)
[»] scaffold0355 (1 HSPs)
scaffold0355 (1-144)||(3349-3493)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-144)||(789-933)
[»] scaffold0006 (3 HSPs)
scaffold0006 (32-157)||(132752-132877)
scaffold0006 (99-144)||(6252-6297)
scaffold0006 (99-144)||(3060-3105)
[»] scaffold1519 (1 HSPs)
scaffold1519 (14-116)||(523-626)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-144)||(34566-34710)
[»] scaffold0510 (1 HSPs)
scaffold0510 (1-157)||(1083-1240)
[»] scaffold1455 (1 HSPs)
scaffold1455 (81-144)||(1721-1784)
[»] scaffold0087 (2 HSPs)
scaffold0087 (1-150)||(43441-43591)
scaffold0087 (97-159)||(36322-36384)
[»] scaffold0098 (1 HSPs)
scaffold0098 (97-158)||(45744-45805)
[»] scaffold0665 (2 HSPs)
scaffold0665 (99-144)||(8216-8261)
scaffold0665 (1-94)||(8136-8230)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-144)||(1751-1895)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-144)||(148456-148600)
[»] scaffold0466 (1 HSPs)
scaffold0466 (80-114)||(6750-6784)


Alignment Details
Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 3439243 - 3439088
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  3439243 agcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccaca 3439144  T
Q  101 atcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  3439143 atcgtgtcacgatttctctgttcttccaaaccacaaatttgaagac-aatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 2627462 - 2627318
Alignment:
Q  14 atcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||| | ||||||||| | | ||||||||||||||||||||||| |||||||||||    
T  2627462 atcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacggaatcacgaaatcgtgtcacgatgccaaattcgtgtcacga 2627363  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  2627362 tttccctgttcttccagaccacaaatttgaagccaaatctcaaca 2627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 33037443 - 33037299
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| ||||||||||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  33037443 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaa 33037344  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  33037343 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 33037299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 4759690 - 4759546
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| |||||||||||||||||| |||    
T  4759690 agcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgtcaa 4759591  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  4759590 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4759546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 10683895 - 10683751
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  |||||||||||||||||||||    
T  10683895 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaa 10683796  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  10683795 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 10683751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 30656126 - 30656270
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  |||||||||||||||||||||    
T  30656126 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaa 30656225  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  30656226 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 30656270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 31043032 - 31042908
Alignment:
Q  33 aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagacc 132  Q
    |||||||||||||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  31043032 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagacc 31042933  T
Q  133 acaaatttgaagacaaatctcaaca 157  Q
    |||||||||||| ||||||||||||    
T  31042932 acaaatttgaagtcaaatctcaaca 31042908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 36979858 - 36980002
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   ||||||||||||||| |||| |||||| |||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  36979858 agcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaa 36979957  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  36979958 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 36980002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 1261571 - 1261414
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  1261571 agcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaa 1261472  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | ||||||| |||||||  |||||||||| ||||||||||||||  ||||| ||||||    
T  1261471 attcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaaaccaaatatcaaca 1261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 6311779 - 6311923
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  |||||||||||||||||||||    
T  6311779 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaa 6311878  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||| |||||| |||||||||||||||||||||||||||    
T  6311879 aatcgtgtcatgatttctctgttcttccagaccacaaatttgaag 6311923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18852783 - 18852639
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  |||||||||||||||||||||    
T  18852783 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaa 18852684  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||| |||||||||| |||||||||||||||||||||||||||    
T  18852683 aatcgtatcacgatttctctgttcttccagaccacaaatttgaag 18852639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 26288376 - 26288520
Alignment:
Q  17 gtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 115  Q
    ||||||||||||||||| || |||||||||||| ||||||||||| | ||||||||||| | | ||||| ||||||||||||||| ||||||||||||||    
T  26288376 gtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgattt 26288475  T
Q  116 ccctgttcttccagaccacaaatttgaagacaaatctcaacaata 160  Q
    | ||||||||||||||||||||||||||| ||| |||||||||||    
T  26288476 ctctgttcttccagaccacaaatttgaagtcaagtctcaacaata 26288520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 26301633 - 26301777
Alignment:
Q  17 gtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 115  Q
    ||||||||||||||||| || |||||||||||| ||||||||||| | ||||||||||| | | ||||| ||||||||||||||| ||||||||||||||    
T  26301633 gtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgattt 26301732  T
Q  116 ccctgttcttccagaccacaaatttgaagacaaatctcaacaata 160  Q
    | ||||||||||||||||||||||||||| ||| |||||||||||    
T  26301733 ctctgttcttccagaccacaaatttgaagtcaagtctcaacaata 26301777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 26313627 - 26313771
Alignment:
Q  17 gtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 115  Q
    ||||||||||||||||| || |||||||||||| ||||||||||| | ||||||||||| | | ||||| ||||||||||||||| ||||||||||||||    
T  26313627 gtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgattt 26313726  T
Q  116 ccctgttcttccagaccacaaatttgaagacaaatctcaacaata 160  Q
    | ||||||||||||||||||||||||||| ||| |||||||||||    
T  26313727 ctctgttcttccagaccacaaatttgaagtcaagtctcaacaata 26313771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18870177 - 18870033
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||| || |  |||||||||||||||||||||    
T  18870177 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacatcttgaaatcgtgtcacgatgccaa 18870078  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  18870077 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 18870033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 7289584 - 7289439
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgcca 98  Q
    ||||||||||   ||||||||||||||| |||| ||||||||||||||| ||  ||||||| |||||||| ||| |||  ||||||||||||||||||||    
T  7289584 agcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaactagctcatggctcccttgaaatcgtgtcacgatgcca 7289485  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||    
T  7289484 aaatcgtgtcactatttctctgttcttccagaccacaaatttgaag 7289439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 39784468 - 39784337
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacg 111  Q
    |||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||||||||| | || |||||||||||| ||||||||||||||||    
T  39784468 atcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacg 39784370  T
Q  112 atttccctgttcttccagaccacaaatttgaag 144  Q
    ||||| |||||||||||||||||||||||||||    
T  39784369 atttctctgttcttccagaccacaaatttgaag 39784337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 7412795 - 7412952
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||| |||| | ||  ||||||||  |||||||||| | |||||||||||   |  |||||||||||||||||||    
T  7412795 agcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggcattacagaatcgtgtcacgatgccaa 7412894  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  7412895 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 15290300 - 15290143
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||||||| | || |    
T  15290300 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgtgtcgcaatcc 15290203  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  15290202 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 15290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 15470669 - 15470512
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||||||| | || |    
T  15470669 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgtgtcgcaatcc 15470572  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  15470571 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 15470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 42575752 - 42575909
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| || ||||||||||| |||| |    
T  42575752 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgtgtcgcgatcc 42575849  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  42575850 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 25327820 - 25327676
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| || ||||| ||  ||||||| ||||||||| ||  |  ||||||||| ||||| |||||    
T  25327820 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaactagctcacagccacttgaaatcgtgccacgaagccaa 25327721  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  25327720 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 25327676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 25689697 - 25689604
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25689697 agcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgcaacctagctcacggca-cccgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 25689618 - 25689558
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 160  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagac-aatctcaacaata 25689558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10688755 - 10688661
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  ||||||||||||||||    
T  10688755 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 10688675 - 10688630
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 10688630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 5702009 - 5701964
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 5701964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 35745822 - 35745979
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  ||  ||| || | ||||||||| | ||||  ||||||||||||  |    
T  35745822 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctcacggcatctccga--tcgtgtcacgattgc 35745919  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
     |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  35745920 caaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 35745979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 4456575 - 4456625
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||| ||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaa 4456625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 11383440 - 11383406
Alignment:
Q  80 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 114  Q
    |||||||| ||||||||||||||||||||||||||    
T  11383440 aaatcgtgccacgatgccaaaatcgtgtcacgatt 11383406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 23799149 - 23799105
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 143  Q
    ||||||||| |||||||| |||||||| || ||||||||||||||    
T  23799149 aaatcgtgttacgatttctctgttctttcaaaccacaaatttgaa 23799105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 4e-68; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 16578945 - 16579102
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  16578945 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaa 16579044  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16579045 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 16579102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 16616435 - 16616278
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  16616435 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaa 16616336  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16616335 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 16616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 27647624 - 27647467
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  27647624 agcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccac 27647525  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27647524 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaaactcaaca 27647467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16554610 - 16554454
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||    
T  16554610 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaa 16554511  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16554510 aatcatgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16631166 - 16631010
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||    
T  16631166 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaa 16631067  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16631066 aatcatgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 411843 - 411683
Alignment:
Q  1 agcaagttt-cacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| |||||| ||||||| ||||||    
T  411843 agcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaattgtgtcacaatgcca 411744  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  411743 aattcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatctcaacaat 411683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 2171947 - 2172104
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| || |||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||    
T  2171947 agcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaa 2172046  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | || |||| ||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  2172047 attcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 2172104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 3073199 - 3073343
Alignment:
Q  14 atcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    ||||||||||||||||| | |||||||||||||||| |||||||| |  | ||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  3073199 atcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtagaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacga 3073298  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  3073299 ttttcctgttcttccagaccacaaatttgaagacaaatctcaaca 3073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 6097860 - 6097988
Alignment:
Q  31 caaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccaga 130  Q
    |||||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||||| |||||||||||||||||| |    
T  6097860 caaatcgtgtcacgatttagcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaa 6097959  T
Q  131 ccacaaatttgaagacaaatctcaacaat 159  Q
    |||||||||||||||||||||||||||||    
T  6097960 ccacaaatttgaagacaaatctcaacaat 6097988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30125174 - 30125030
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   ||||||||||||||||||||| ||||| |||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  30125174 agcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaa 30125075  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  30125074 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 30125030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 22709488 - 22709645
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| | |||||| |||| | | ||||||||||||| ||||||    
T  22709488 agcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcatggcatcacaaaatcgtgtcacgttgccaa 22709587  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  22709588 attcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 22709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 5674386 - 5674227
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||  |||||||||||||||||||| || |||||||||||| ||||||||||| | ||||||||||| | | ||||| ||||||||||||||    
T  5674386 agcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaa 5674287  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    | || |||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||    
T  5674286 attcatgtcacgatttctctgttcttccagaccacaaatttgaagccaactatcaacaat 5674227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 25420953 - 25420797
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||| | ||    
T  25420953 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacggtccc 25420856  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25420855 aaaattgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 6136391 - 6136549
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||  |||||||||||||||||||| ||||||| |||||||||   |||||||| | |||||||||||| || ||||||||||| |||| |||    
T  6136391 agcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctcacggcatcc-gaaatcgtgtctcgattcca 6136489  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6136490 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacaat 6136549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 11857411 - 11857555
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||  |  |||||||||||||||||||||    
T  11857411 agcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaa 11857510  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  11857511 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 11857555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 26253714 - 26253589
Alignment:
Q  32 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 131  Q
    ||||||||||||||||| ||||||||| | ||| ||||||| | | | ||||| ||||||||||||||| ||||||||||||||| |||||||| |||||    
T  26253714 aaatcgtgtcacgatttggcaccctgctaactatctcacggtatcacaaaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagac 26253615  T
Q  132 cacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||    
T  26253614 cacaaatttgaagacaaatctcaaca 26253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 14742082 - 14741938
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   ||||||||||||||| |||| |||||| |||||||| ||  ||||||| |||||||||| |  |  |||||||||||||||||||||    
T  14742082 agcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacgaccacttgaaatcgtgtcacgatgccaa 14741983  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  14741982 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 14741938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 22010345 - 22010201
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||| || |||||  |  |||||||||||||||||||||    
T  22010345 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactaacttacggccacttgaaatcgtgtcacgatgccaa 22010246  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  22010245 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 22010201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 34166823 - 34166673
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  34166823 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 34166726  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34166725 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 34166673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 13151006 - 13150856
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  13151006 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 13150909  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  13150908 caaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 13150856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 33342531 - 33342688
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca--aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  ||||||||||||||||||||  ||||||| |||||||| |||||| ||||| | |||||||||||| || ||||||| ||| |||| |    
T  33342531 agcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgcgtcgcgatcc 33342628  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||    
T  33342629 caaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagac-aatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6026990 - 6026834
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||| || |||| |||||||||||||| |||||    
T  6026990 agcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctctcg-cacctcgaaatcgtgtcacaatgcc 6026893  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
      |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||    
T  6026892 gcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaagac-aatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 34164601 - 34164440
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  34164601 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatcc 34164504  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 161  Q
    || |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  34164503 cagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa-ctcaacaataa 34164440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 16652853 - 16652759
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||||||||| |||||||||||| ||||||||||  ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  16652853 agcaagtttcacgattgtgtcacgattttcccaaatcgttccacgactttgcaccctacaacctagctcacggcaccccgaaatcgtgtcacgat 16652759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 6438927 - 6439071
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| |||||| ||||||| |||| || |||| || | ||||||||||| | || |||||||||||| |||    
T  6438927 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattcca 6439025  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||    
T  6439026 aaatcgtgtcacgatttctatgttcttccagaccataaatttgaag 6439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 23896800 - 23896957
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||| |||| ||||  ||||||||  |||||||||| | | ||||||  |   | ||||||||||||||||||||    
T  23896800 agcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaa 23896899  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||  |||||||| || ||||||||||||||| ||||| ||||||    
T  23896900 aatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 23896957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 34151907 - 34151824
Alignment:
Q  77 ccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 161  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  34151907 ccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa-ctcaacaataa 34151824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5266516 - 5266610
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| |||||||||||||||||    
T  5266516 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 16652773 - 16652716
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16652773 aaatcgtgtcacgatttccctgttctttcagaccacaaatttgaagac-aatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 5266596 - 5266641
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  5266596 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 5266641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 14737142 - 14737097
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 14737097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 16839174 - 16839331
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  |    
T  16839174 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgc 16839271  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
     |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  16839272 caaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 16839331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28155227 - 28155167
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 60  Q
    ||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  28155227 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaa 28155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 33330089 - 33329932
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  |    
T  33330089 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgc 33329992  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
     |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33329991 caaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 5343990 - 5344052
Alignment:
Q  82 atcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||| | |||||||| ||||||||| ||||||| ||| |||||||||||||||    
T  5343990 atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaag 5344052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 5757108 - 5756950
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||| |||| ||||  ||||||||  |||||||||| | | |||||| ||   | |||| ||||||||||||||     
T  5757108 agcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgacattacaaaattgtgtcacgatgccac 5757009  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||| ||||| || |||||  | |||| |||||| ||| ||||| |||||||    
T  5757008 aatcgtgtcacaatttctctattcttttaaaccataaatttaaagccaaatttcaacaa 5756950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25421047 - 25421000
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgattt 48  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||    
T  25421047 agcaagtttcacgatcgtgtcacgattttcccaatcatgtcacgattt 25421000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 28155145 - 28155102
Alignment:
Q  101 atcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaag 28155102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14737222 - 14737128
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||||   ||||||||||||||| |||| |||||| |||||||| ||  ||||||| ||||||||||||  |  ||||||||||||||||    
T  14737222 agcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgat 14737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 5017026 - 5016981
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaag 5016981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 6005850 - 6006008
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | |||| |||| | ||||  ||||||||||||  |    
T  6005850 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcatggcatctccga--tcgtgtcacgattgc 6005947  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
     |||||| | ||||||| | ||||| ||||| ||||||||||||||| ||| | |||||||    
T  6005948 caaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaattttcaacaa 6006008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 31086003 - 31085958
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaag 31085958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 16554691 - 16554659
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgat 46  Q
    |||||||||||||||||||||||||||||||||    
T  16554691 atcgtgtcacgatttcccaaatcgtgtcacgat 16554659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 16578864 - 16578896
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgat 46  Q
    |||||||||||||||||||||||||||||||||    
T  16578864 atcgtgtcacgatttcccaaatcgtgtcacgat 16578896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 16616516 - 16616484
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgat 46  Q
    |||||||||||||||||||||||||||||||||    
T  16616516 atcgtgtcacgatttcccaaatcgtgtcacgat 16616484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 16631247 - 16631215
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgat 46  Q
    |||||||||||||||||||||||||||||||||    
T  16631247 atcgtgtcacgatttcccaaatcgtgtcacgat 16631215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 16652934 - 16652902
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgat 46  Q
    |||||||||||||||||||||||||||||||||    
T  16652934 atcgtgtcacgatttcccaaatcgtgtcacgat 16652902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5343908 - 5343959
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgc 51  Q
    ||||||||||   |||||||||||||||||||| ||||||||||||||||||    
T  5343908 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgc 5343959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 5571806 - 5571755
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 150  Q
    |||||||||||||||||| || |||| ||| | |||||||||||||||||||    
T  5571806 aaatcgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaat 5571755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 11857331 - 11857365
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattt 48  Q
    |||||| ||||||||||||||||||||||||||||    
T  11857331 atcgtgccacgatttcccaaatcgtgtcacgattt 11857365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 21272514 - 21272474
Alignment:
Q  104 gtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||||| |||| | |||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaag 21272474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 22536696 - 22536853
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  22536696 agcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccac 22536795  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22536796 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 22536853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 29720123 - 29719965
Alignment:
Q  1 agcaagttt-cacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  29720123 agcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgcca 29720024  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29720023 aattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29719965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 10592999 - 10592844
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| |||||||||||| ||| |||||||||||| ||||    
T  10592999 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctatctcacggcacccggaa-tcgtgtcacgataccaa 10592901  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10592900 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 9789665 - 9789809
Alignment:
Q  14 atcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  9789665 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacga 9789764  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9789765 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9789809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 29722310 - 29722152
Alignment:
Q  1 agcaagttt-cacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||| ||||  ||||||||| ||||| |||||||||||||||||||||    
T  29722310 agcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcaccacgaaatcgtgtcacgatgcca 29722211  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29722210 aattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 18442089 - 18442233
Alignment:
Q  14 atcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||||||||||| |||||||||||    
T  18442089 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacga 18442188  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18442189 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 18442233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 26177610 - 26177466
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  26177610 atcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacga 26177511  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  26177510 tttccctgttcttccagaccacaaatttgaagccaaatctcaaca 26177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 40379834 - 40379676
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||| | || |||||||||||| |||    
T  40379834 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattcca 40379736  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40379735 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaat 40379676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 29752266 - 29752390
Alignment:
Q  33 aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagacc 132  Q
    ||||||| |||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29752266 aatcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 29752365  T
Q  133 acaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||    
T  29752366 acaaatttgaagacaaatctcaaca 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16546372 - 16546216
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||| | || |||||||||||| |||    
T  16546372 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattcca 16546274  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  16546273 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 40382045 - 40381889
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||| | || |||||||||||| |||    
T  40382045 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattcca 40381947  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  40381946 aaatcgtggcacgatttccctgttctttcagaccacaaatttgaagac-aatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 29751600 - 29751724
Alignment:
Q  33 aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagacc 132  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||  ||||||||| || ||||||||||||||||||||||||||||    
T  29751600 aatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagacc 29751699  T
Q  133 acaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||    
T  29751700 acaaatttgaagacaaatctcaaca 29751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 30631792 - 30631936
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   ||||||||||||||||||||| |||||||||||||| ||  ||||||| || |||||||||||| ||||||||||||||||||||||    
T  30631792 agcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaa 30631891  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  30631892 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 30631936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 24136327 - 24136485
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| | |||||| |||||||||||||||    
T  24136327 agcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaattgtgtcacgatgccaa 24136426  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    | |||||||||||||||  |||||||||||||||||||||||||  ||||| |||||||    
T  24136427 attcgtgtcacgatttctgtgttcttccagaccacaaatttgaaaccaaatatcaacaa 24136485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16544150 - 16543994
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || | |||||||| ||||| | || |||||||||||| |||    
T  16544150 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagctcacagcacctccaa-tcgtgtcacgattcca 16544052  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  16544051 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 16407785 - 16407641
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||| | ||| ||||||||||||||| ||||||||||| | ||||||||||| | | |||||||||||||||| |||| |||||||||||    
T  16407785 atcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacga 16407686  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||    
T  16407685 tttctctgttcttccagaccacaaatttgaagccaaatctcaaca 16407641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 27450253 - 27450397
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| ||  |||||||||||||||||||||    
T  27450253 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaa 27450352  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  27450353 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 27450397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 1456794 - 1456650
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||| || |||||||||||| ||  |||||||||||||||||||||    
T  1456794 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaactagctcacggccccttgaaatcgtgtcacgatgccaa 1456695  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  1456694 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1456650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 27445410 - 27445554
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| ||  |||||||||||||||||||||    
T  27445410 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaa 27445509  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||    
T  27445510 aatcgtgtcacgatttctctgttcttctagaccacaaatttgaag 27445554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 15465000 - 15465125
Alignment:
Q  32 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 131  Q
    ||||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||    
T  15465000 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagac 15465099  T
Q  132 cacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||| ||||||||||||    
T  15465100 cacaaatttgaagccaaatctcaaca 15465125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 43599161 - 43599306
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| |||  ||||||||||||||| ||||    
T  43599161 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgcca 43599260  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  43599261 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43599306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 43604653 - 43604798
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| |||  ||||||||||||||| ||||    
T  43604653 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgcca 43604752  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  43604753 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43604798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 43610145 - 43610290
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| |||  ||||||||||||||| ||||    
T  43610145 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgcca 43610244  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  43610245 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43610290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 26170497 - 26170357
Alignment:
Q  18 tgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 116  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||| ||||| |||||||||||||||    
T  26170497 tgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttc 26170398  T
Q  117 cctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||| |||| |||||||||| |||| |||||||    
T  26170397 cctgttcttccataccataaatttgaagccaaaactcaaca 26170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 16409221 - 16409077
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||| | ||| |||||||||| |||| ||||| ||||| | |||||||| || | | ||||||||||||||||||||| |||||||||||    
T  16409221 atcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaaccagctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacga 16409122  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||    
T  16409121 tttctctgttctttcagaccacaaatttgaagccaaatctcaaca 16409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 29402706 - 29402562
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||| |||  |  ||||||||| |||||||||||    
T  29402706 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccacttgaaatcgtgccacgatgccaa 29402607  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  29402606 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 29402562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25077862 - 25077713
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||||||| ||||||| |||||||| |||||| | ||| | |||||||||||||| | || ||| |||||||| ||    
T  25077862 agcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgattt-gcacccctacaaccctagctcacggcacctccaa-tcgcgtcacgatccc 25077765  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25077764 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 25077713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25135831 - 25135682
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||||||| ||||||| |||||||| |||||| | ||| | |||||||||||||| | || ||| |||||||| ||    
T  25135831 agcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgattt-gcacccctacaaccctagctcacggcacctccaa-tcgcgtcacgatccc 25135734  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25135733 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 25135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 9352964 - 9352807
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||| || ||||||| ||||||||  |||||||||| | |||||||||||   | |||||||||||||||||||     
T  9352964 agcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatgccac 9352865  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||| ||||||||||| |||||||| || ||||||||||||||| ||||||||||||    
T  9352864 aatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaaatctcaaca 9352807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 36931968 - 36931843
Alignment:
Q  32 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 131  Q
    ||||||||||||||||| ||||||||||| | |||||||| || | | |||||||| |||||||||||| ||||||||||||||| ||||||||||| ||    
T  36931968 aaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaac 36931869  T
Q  132 cacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||  |||||||||||    
T  36931868 cacaaatttgaagcgaaatctcaaca 36931843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 15045124 - 15045267
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || |||||||||| | | ||||||||||||||| ||||    
T  15045124 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcatctc-aaatcgtgtcacgattccaa 15045222  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||    
T  15045223 aatcgtgtcacgatttctctgttcttccaaactacaaatttgaag 15045267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 28807230 - 28807088
Alignment:
Q  3 caagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaa 100  Q
    ||||||||  ||||||||||||||||||||| |||||| |||||||||||||||||||| || | ||||||||| | | | |||||||||||||  ||||    
T  28807230 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcacggcatctc-agatcgtgtcacgattgcaaa 28807132  T
Q  101 atcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||| ||||||| | |||||||||||||||| ||||||||||    
T  28807131 atcgtgacacgattcctctgttcttccagaccataaatttgaag 28807088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 37556199 - 37556131
Alignment:
Q  82 atcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 150  Q
    |||||||||||||  | |||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  37556199 atcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37556131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 37561103 - 37560953
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||  ||||||||||||||||||||| |||||| ||||||||  | || |  || || | ||||||||| | | | |||||||||||||        
T  37561103 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacggcatctc-agatcgtgtcacgattatc 37561005  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 150  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  37561004 aaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37560953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 35388196 - 35388246
Alignment:
Q  107 tcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaagtcaaatctcaaca 35388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 31180706 - 31180787
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||| ||||  ||||||||||||||||    
T  31180706 atcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacaccttgaaatcgtgtcacgat 31180787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 31180773 - 31180818
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 31180818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 43592797 - 43592842
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43592842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 2785806 - 2785963
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  |    
T  2785806 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgc 2785903  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
     |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  2785904 caaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 2785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 33768615 - 33768772
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  |    
T  33768615 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgc 33768712  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
     |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33768713 caaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 33791747 - 33791904
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||||||| | ||||  ||||||||||||  |    
T  33791747 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccga--tcgtgtcacgattgc 33791844  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
     |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33791845 caaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33791904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 14520796 - 14520855
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||| | |||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacaa 14520855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 43592716 - 43592811
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccc-cgaaatcgtgtcacgat 94  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||| |||  ||||||||||||||||    
T  43592716 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgat 43592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 31396633 - 31396488
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctcacggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcac 110  Q
    |||||||||||||||||||| |||||| |||||||||||  || |||| || ||||||| ||  | ||||  ||||||||||||  | |||||||| |||    
T  31396633 atcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcactgcctctccga--tcgtgtcacgattgccaaatcgtgacac 31396536  T
Q  111 gatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    |||| | ||||||| ||| ||||||||||||||| ||| | |||||||    
T  31396535 gattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 31396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38219873 - 38219947
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggca 74  Q
    ||||||||| |  |||||||||| ||||||||| ||||||||||||||| ||||||| ||| | |||||||||||    
T  38219873 agcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaaccagctcacggca 38219947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 43592636 - 43592670
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattt 48  Q
    |||||||||||||||||||||||||||||||||||    
T  43592636 atcgtgtcacgatttcccaaatcgtgtcacgattt 43592670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 43599081 - 43599115
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattt 48  Q
    |||||||||||||||||||||||||||||||||||    
T  43599081 atcgtgtcacgatttcccaaatcgtgtcacgattt 43599115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 43604573 - 43604607
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattt 48  Q
    |||||||||||||||||||||||||||||||||||    
T  43604573 atcgtgtcacgatttcccaaatcgtgtcacgattt 43604607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 43610065 - 43610099
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattt 48  Q
    |||||||||||||||||||||||||||||||||||    
T  43610065 atcgtgtcacgatttcccaaatcgtgtcacgattt 43610099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 10593080 - 10593048
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgat 46  Q
    |||||||||||||||||||||||||||||||||    
T  10593080 atcgtgtcacgatttcccaaatcgtgtcacgat 10593048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 11916502 - 11916452
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    |||| ||||||||||||| |||||||| || ||||||||||||||| ||||    
T  11916502 aaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaaa 11916452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 27445330 - 27445364
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattt 48  Q
    |||||| ||||||||||||||||||||||||||||    
T  27445330 atcgtgccacgatttcccaaatcgtgtcacgattt 27445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 27450173 - 27450207
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattt 48  Q
    |||||| ||||||||||||||||||||||||||||    
T  27450173 atcgtgccacgatttcccaaatcgtgtcacgattt 27450207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 29751507 - 29751541
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattt 48  Q
    ||||||||||||||| |||||||||||||||||||    
T  29751507 atcgtgtcacgattttccaaatcgtgtcacgattt 29751541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 12083708 - 12083667
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 140  Q
    |||||||||||||||||| ||||||||||| |||| ||||||    
T  12083708 aaatcgtgtcacgatttctctgttcttccaaaccataaattt 12083667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 6716241 - 6716084
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  6716241 agcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaa 6716142  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  6716141 aatcgtgtcacgatttccctgttcttccagaccacaaatttcaagac-aatctcaacaa 6716084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 54634866 - 54634710
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  54634866 agcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctcacggcaccccgaaatcgtgtcacaatgccaa 54634767  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54634766 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 54634710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 800829 - 800685
Alignment:
Q  14 atcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    ||||||||||||||||||| |||||||||||||||| |||||| |||| | ||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  800829 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacga 800730  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  800729 tttccctgttcttccagaccacaaattcgaagacaaatctcaaca 800685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 1306447 - 1306604
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| | |||||||| |||| ||||||||||||||||||||||    
T  1306447 agcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcacgatgccaa 1306546  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | || |||||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  1306547 attcatgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 1306604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 8477846 - 8477990
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||| | |||||||||||||||||||| |||||| |||||||| ||| || |||| ||||||||||||||| ||||||||||||||||||||||    
T  8477846 agcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcacctcgaaatcgtgtcacgatgccaa 8477945  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||    
T  8477946 aatcgtgtcacaatttctctgttcttccagaccacaaatttgaag 8477990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 40372412 - 40372268
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  40372412 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaa 40372313  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  40372312 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 40372268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 3617190 - 3617034
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||    
T  3617190 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatacc 3617093  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3617092 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 22172818 - 22172674
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || |||||||||||| ||||||||||||||||||||||    
T  22172818 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaa 22172719  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  22172718 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 22172674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 23198386 - 23198530
Alignment:
Q  14 atcgtgtcacgatttc-ccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||| | ||||||||||| | | |||||||||||||||| |||| |||||||||||    
T  23198386 atcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacga 23198485  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||    
T  23198486 tttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 23200585 - 23200729
Alignment:
Q  14 atcgtgtcacgatttc-ccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||| | ||||||| ||| | | ||||||||||||||||||||| |||||||||||    
T  23200585 atcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacga 23200684  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||    
T  23200685 tttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23200729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 7782586 - 7782712
Alignment:
Q  31 caaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccaga 130  Q
    |||||||||||||||||| ||||||||||| | ||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  7782586 caaatcgtgtcacgatttggcaccctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctaga 7782685  T
Q  131 ccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||| ||||||||||||    
T  7782686 ccacaaatttgaagccaaatctcaaca 7782712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 25637169 - 25637012
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||| || |||| ||||||||||||||||||||    
T  25637169 agcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctctcg-cacctcgaaatcgtgtcacgatgcc 25637072  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    | ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  25637071 acaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagac-aatctcaacaa 25637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 26928237 - 26928078
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||| | ||| || |||||||||||| ||||||||||| | |||||||||||   | ||||||||||||||||||||    
T  26928237 agcaagtttgaaaatcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaa 26928138  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    | ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  26928137 attcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacaat 26928078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 33386294 - 33386137
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||| | |||| |||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||    
T  33386294 agcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaa 33386195  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | ||||||||||||||| |||||||| | |||||||||||||||| ||||||||||||    
T  33386194 attcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaaatctcaaca 33386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 7167726 - 7167870
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  ||||| |||||||||||||||    
T  7167726 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaattgtgtcacgatgccaa 7167825  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||    
T  7167826 aatcgtgtcacgatttctctgttcttccagaacacaaatttgaag 7167870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18656872 - 18657017
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagct-cacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| ||||||||||||||| ||  ||||||| || ||| ||||||||| |||||||||||||||||||||    
T  18656872 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgcca 18656971  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||    
T  18656972 aaatcgtgtcatgatttctctgttctttcagaccacaaatttgaag 18657017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 37408179 - 37408036
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 113  Q
    ||||||||||||||| |  ||||||| ||||||||  |||||||||| | ||||||||||||  | ||||||||||||||||||| ||||||||||||||    
T  37408179 atcgtgtcacgatttacacaatcgtgccacgatttgacaccctgcaaaccagctcacggcactacaaaatcgtgtcacgatgccacaatcgtgtcacgat 37408080  T
Q  114 ttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||  |||||||||| ||||||||||||||| ||||||||||||    
T  37408079 ttctttgttcttccaaaccacaaatttgaagccaaatctcaaca 37408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6718425 - 6718331
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6718425 agcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 45282722 - 45282628
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  45282722 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 4598950 - 4599107
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca--aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  ||||||||||||||||||||  ||||||| |||||||| |||||| ||||| | |||||||||||| || ||||||||||| |||| |    
T  4598950 agcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcgcgatcc 4599047  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  4599048 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 4601171 - 4601328
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca--aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  ||||||||||||||||||||  ||||||| |||||||| |||||| ||||| | |||||||||||| || ||||||||||| |||| |    
T  4601171 agcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcgcgatcc 4601268  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  4601269 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 37726155 - 37726300
Alignment:
Q  14 atcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||| | |||| ||||||||||||||  |||||||||| | ||||||||||| | | |||||||||||||||  |||| |||||||||||    
T  37726155 atcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatatcaaattcgtgtcacga 37726254  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    |||| ||||||||||| ||||||||||||||| |||||||||||||    
T  37726255 tttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 37726300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 28501308 - 28501164
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   ||||||||||||||| |||| |||||| |||||||| |   ||||||| |||||||||||| ||  |||||||||||||||||||||    
T  28501308 agcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaa 28501209  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||    
T  28501208 aatcgtgtcacgatttctctgttcttccaggccacaaatttgaag 28501164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 28503459 - 28503331
Alignment:
Q  17 gtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 115  Q
    ||||||||||||||||| |||||| |||||||| ||  || |||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  28503459 gtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 28503360  T
Q  116 ccctgttcttccagaccacaaatttgaag 144  Q
    | |||||||||||| ||||||||||||||    
T  28503359 ctctgttcttccaggccacaaatttgaag 28503331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10055962 - 10055812
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  10055962 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 10055865  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10055864 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10058184 - 10058034
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  10058184 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 10058087  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10058086 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10058034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10060406 - 10060256
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  10060406 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 10060309  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10060308 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10060256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10062628 - 10062478
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  10062628 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 10062531  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10062530 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10062478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10064850 - 10064700
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  10064850 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 10064753  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10064752 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10064700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10067072 - 10066922
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  ||||||||||||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  10067072 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 10066975  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10066974 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10066922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 27453424 - 27453581
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||| | || |||| ||||||||||| ||||||| ||| | ||||||||||| | | ||||||||||||||||||||    
T  27453424 agcaagtttgaaaatcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcacaaaatcgtgtcacgatgccaa 27453523  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | ||||||||| ||||| ||| |||| |||||||||||||||||| ||||||||||||    
T  27453524 attcgtgtcacaatttctctgctctttcagaccacaaatttgaagccaaatctcaaca 27453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 27352237 - 27352097
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| |    |||||| | |||||||||||||  |||||||||||||||||||||    
T  27352237 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaaacaagctcacggcaccttgaaatcgtgtcacgatgccaa 27352138  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaattt 140  Q
    ||||||||||||||||  ||||||||| |||||||||||||    
T  27352137 aatcgtgtcacgatttttctgttcttcgagaccacaaattt 27352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 10208935 - 10208778
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  10208935 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 10208838  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10208837 caaaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 10208778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2671221 - 2671111
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||| ||||||| |||||||||||||||  |||||| ||||||||||||||    
T  2671221 agcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcatgtcacgatgccaa 2671122  T
Q  100 aatcgtgtcac 110  Q
    |||||||||||    
T  2671121 aatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 10211135 - 10210978
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||| ||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| ||  |||||| |||||||| |    
T  10211135 agcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgattt-gcacccctgcaaccctaactcacggcatcct-aaatcgcgtcacgatac 10211038  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  10211037 caaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagac-aatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 45282642 - 45282583
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45282642 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaat 45282583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 2672575 - 2672416
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | ||| ||||| | ||||  ||||||||||||  |    
T  2672575 agcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcccggcatctccga--tcgtgtcacgattac 2672478  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||| |||||  |||||||    
T  2672477 aaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaattccaacaat 2672416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 6718345 - 6718288
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6718345 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 32143868 - 32143928
Alignment:
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  32143868 caaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 32143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32143790 - 32143884
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||| |  |||||||||||||| | ||| ||||||||||||||| ||||||||||| ||||||||||||| | | |||||||||||||||    
T  32143790 agcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 2676731 - 2676581
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcacc-ccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | ||| || || | ||||  ||||||||||||  |    
T  2676731 agcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcccgacatctccga--tcgtgtcacgattac 2676634  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 150  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  2676633 aaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2676581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 27974493 - 27974433
Alignment:
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 8738679 - 8738585
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  |||||| |||||||||    
T  8738679 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcaccttgaaatcatgtcacgat 8738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9090917 - 9090823
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  |||||| |||||||||    
T  9090917 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcaccttgaaatcatgtcacgat 9090823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 27986095 - 27986001
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||| |  |||||||||||||| | || |||||||||||||||| ||||||||||| | ||||||||||| | | |||||||||||||||    
T  27986095 agcaagtttgaaaatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 27986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 27986017 - 27985957
Alignment:
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||  ||||||||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaaatcaaatctcaaca 27985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 36029640 - 36029704
Alignment:
Q  80 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||| |||| ||  ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  36029640 aaatcgtgacacgttgataaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 36029704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 40734132 - 40734084
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 147  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagaca 40734084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 40845220 - 40845279
Alignment:
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||| ||||||| ||| | || |||||||||||||||||||||||    
T  40845220 aaaatcgtgtcacgatttctctgttctcccaaaacataaatttgaagacaaatctcaaca 40845279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 8738599 - 8738554
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  8738599 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaag 8738554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 9090837 - 9090792
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  9090837 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaag 9090792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 16264896 - 16264941
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaag 16264941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 21711768 - 21711813
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21711813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 27027273 - 27027318
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 30709316 - 30709271
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 30709271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 27038588 - 27038667
Alignment:
Q  79 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    |||||||||||||| ||   |||||||||||||||||| ||||| ||||| |||||||| |||||| ||| | |||||||    
T  27038588 gaaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaacaa 27038667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 32475997 - 32476059
Alignment:
Q  82 atcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  32475997 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 32476059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 32480855 - 32480917
Alignment:
Q  82 atcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  32480855 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 32480917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 39032075 - 39032017
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||| ||||||||||| || |||||||||||| ||| | ||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaaca 39032017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 40735161 - 40735015
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatcta-gctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||| |  ||||||||||| ||||||||| ||||| |||||||  ||||||||||| | | |||||| ||     ||||||||| |||| ||       
T  40735161 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgcttg--gaaatcgtgacacgttgatg 40735064  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 147  Q
    |||||||||||||||||  |||||| |||| ||||||||||||||||||    
T  40735063 aaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaagaca 40735015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32475915 - 32475966
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgc 51  Q
    ||||||||||   |||||||||||||||||||| ||||||||||||||||||    
T  32475915 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgc 32475966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32480773 - 32480824
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgc 51  Q
    ||||||||||   |||||||||||||||||||| ||||||||||||||||||    
T  32480773 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgc 32480824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 1730959 - 1730921
Alignment:
Q  106 gtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaag 1730921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 22172898 - 22172864
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattt 48  Q
    |||||| ||||||||||||||||||||||||||||    
T  22172898 atcgtgccacgatttcccaaatcgtgtcacgattt 22172864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 35926057 - 35926101
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaag 35926101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 40592302 - 40592257
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||||    
T  40592302 aaatcatgtcacgatttctccgttcttccaaaccacaaatttgaag 40592257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 48438782 - 48438823
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 140  Q
    |||||||||||||||||| |||||||| || |||||||||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaattt 48438823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 6716322 - 6716290
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgat 46  Q
    ||||||||||||||| |||||||||||||||||    
T  6716322 atcgtgtcacgattttccaaatcgtgtcacgat 6716290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 24789583 - 24789426
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  24789583 agcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaactagctcacggcaccacgaaatcgtgtcacgatgccaa 24789484  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24789483 attcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 24789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20343656 - 20343500
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||||||||     
T  20343656 agcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggcaacctagctcacggcaccccgaaatcgtgtcacgatgccac 20343557  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20343556 aatcgcgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 21640267 - 21640411
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| ||||||||||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  21640267 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaa 21640366  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  21640367 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 21640411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 43504577 - 43504721
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  43504577 atcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacga 43504676  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  43504677 tttccctgttcttccagaccacaaatttgaagctaaatctcaaca 43504721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 18392624 - 18392780
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||| | || |||||||||||| |||    
T  18392624 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattcca 18392722  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  18392723 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 48408542 - 48408397
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||| |||||||||||    
T  48408542 atcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacga 48408443  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||    
T  48408442 tttctctgttctttcagaccacaaatttgaagccaaatctcaacaa 48408397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 39731077 - 39730933
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||| | ||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||| |||||||||||    
T  39731077 atcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacga 39730978  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||    
T  39730977 tttctctgttcttccagaccacaaatttgaagccaaatctcaaca 39730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 18409242 - 18409399
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||| ||| ||||||||| ||||| ||||||||||| | ||||||||||||| | ||||||||||||||||||||    
T  18409242 agcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacggcaccacaaaatcgtgtcacgatgccaa 18409341  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | |||||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  18409342 attcgtgttacgatttctctgttcttccagaacacaaatttgaagccaaatctcaaca 18409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 18414118 - 18414275
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  ||||||| |||||||||||| ||||||||||||||| || |||||||| | ||||||||||||| | |||||||| |||||||||||    
T  18414118 agcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacggcaccacaaaatcgtgccacgatgccaa 18414217  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | ||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  18414218 attcgtgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 18414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 21646486 - 21646643
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  ||||||||||||||| |||| ||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||    
T  21646486 agcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaa 21646585  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | | ||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  21646586 atttgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatgtcaaca 21646643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 2058449 - 2058592
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| | ||||||||||||||||||||    
T  2058449 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctc-aaatcgtgtcacgatgccaa 2058547  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  2058548 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 2058592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 20357184 - 20357040
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   ||| |||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  |||||||||||||||||||||    
T  20357184 agcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaa 20357085  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  20357084 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 20357040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 32060732 - 32060889
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||    
T  32060732 agcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatacc 32060829  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32060830 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 32060889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 6592765 - 6592921
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||    
T  6592765 agcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatccc 6592862  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6592863 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 6594981 - 6595138
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||    
T  6594981 agcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatccc 6595078  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  6595079 aaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagac-aatctcaacaa 6595138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 12406701 - 12406845
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  | ||||| ||||||||||||  |  |||||||||||||||||||||    
T  12406701 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaactagctcacggccacttgaaatcgtgtcacgatgccaa 12406800  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  12406801 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 12406845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 25767389 - 25767543
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  ||||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||    
T  25767389 agcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaa 25767488  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 160  Q
    | | |||||||||||||       ||||||||||||||||||||| ||||| |||||||||    
T  25767489 atttgtgtcacgatttc------tttccagaccacaaatttgaagccaaatatcaacaata 25767543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 21811895 - 21811745
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||||||| | | |||||||||| | | | |||||||||||||| ||    
T  21811895 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctcacggcatctc-agatcgtgtcacgatggca 21811797  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 150  Q
    |||||||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  21811796 aaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 21811745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 4873581 - 4873709
Alignment:
Q  17 gtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 115  Q
    ||||||||||||||||| |||||| |||||||| ||  ||||||| ||| || |||||  |  |||||||||||||||||||||||||||||||||||||    
T  4873581 gtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgattt 4873680  T
Q  116 ccctgttcttccagaccacaaatttgaag 144  Q
    | |||||||||||||||||||||||||||    
T  4873681 ctctgttcttccagaccacaaatttgaag 4873709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 1562509 - 1562591
Alignment:
Q  78 cgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 161  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1562509 cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaataa 1562591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 1533057 - 1532947
Alignment:
Q  4 aagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaat 102  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||| |||||| | ||||| ||||||||||||||| |    
T  1533057 aagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcacctcaaaatcatgtcacgatgccaaatt 1532958  T
Q  103 cgtgtcacgat 113  Q
    |||||||||||    
T  1532957 cgtgtcacgat 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 24023975 - 24023831
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||| | ||  |  ||||||||| ||||||||||     
T  24023975 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctctctgccacttgaaatcgtgccacgatgccac 24023876  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  24023875 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24023831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 47264110 - 47264267
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||| || ||| ||| ||||||||  |||||| ||| | |||||||| ||   | ||||||||||||||||||||    
T  47264110 agcaagtttgaaaatcgtgtcacgatttcacacaattgtgccacgatttgacaccctacaaaccagctcacgacattacaaaatcgtgtcacgatgccaa 47264209  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||| || |||||||| ||||||||||||||| ||||| ||||||    
T  47264210 aatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 2479816 - 2479960
Alignment:
Q  14 atcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    ||||||| |||||||| |||| ||||| ||||||||  |||||||||| | |||||||||||     ||||||||||||||||||||||||||||||| |    
T  2479816 atcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacggcattagaaaatcgtgtcacgatgccaaaatcgtgtcacaa 2479915  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||| |||||||| || ||||||||||||||| ||||| ||||||    
T  2479916 tttctctgttcttacaaaccacaaatttgaagccaaatttcaaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 1532958 - 1532884
Alignment:
Q  83 tcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  1532958 tcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaaca 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 144
Target Start/End: Original strand, 12397390 - 12397480
Alignment:
Q  54 cctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||| ||||||||||||  |  |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12397390 cctgcaaactagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaag 12397480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 31109227 - 31109082
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctcac-ggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || |||| || |||||   ||||||||| |||||||||    
T  31109227 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttacaggcactt-gaaatcgtgccacgatgcc 31109129  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  31109128 aaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 31109082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 44847696 - 44847617
Alignment:
Q  80 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||| ||||| ||||||||    
T  44847696 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttcaacaat 44847617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18389188 - 18389246
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccctgc 58  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  18389188 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgc 18389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 21983761 - 21983867
Alignment:
Q  51 caccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 150  Q
    |||||||||| | |||||||| ||   | ||||||||||||||||   |||||||||||||||||| ||||||||||| ||||||||||||||| ||| |    
T  21983761 caccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 21983860  T
Q  151 ctcaaca 157  Q
     ||||||    
T  21983861 ttcaaca 21983867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 21989388 - 21989532
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 113  Q
    ||||||||||| ||  | |||||||| |||||||   | |||||||| | |||||||| ||   | ||||||||||||||||   ||||| |||||||||    
T  21989388 atcgtgtcacgtttcacaaaatcgtgccacgattggtcgccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcttgtcacgat 21989487  T
Q  114 ttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||| ||||||||||| ||||||||||||||| ||| | |||||||    
T  21989488 ttctctgttcttccaaaccacaaatttgaagccaactttcaacaa 21989532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 16880504 - 16880648
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||| ||||||||| |||||| |||||||||||  || |||| |||| ||||| ||  |||  | ||||||||||||| ||    
T  16880504 agcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctccctga-tcgtgtcacgatggca 16880602  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||| ||||||| | ||| ||||||| ||||| |||||||||    
T  16880603 aaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 16885359 - 16885503
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||| ||||||||| |||||| |||||||||||  || |||| |||| ||||| ||  |||  | ||||||||||||| ||    
T  16885359 agcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcactgcctccctga-tcgtgtcacgatggca 16885457  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||| ||||||| | ||| ||||||| ||||| |||||||||    
T  16885458 aaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 18390506 - 18390562
Alignment:
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagac-aatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 24260895 - 24260833
Alignment:
Q  82 atcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  24260895 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 24260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 79955 - 80000
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaag 80000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1562431 - 1562479
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattt 48  Q
    |||||||||||||||||||||||||||| || |||||||| ||||||||    
T  1562431 agcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24260977 - 24260926
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgc 51  Q
    ||||||||||   |||||||||||||||||||| ||||||||||||||||||    
T  24260977 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgc 24260926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 4509335 - 4509369
Alignment:
Q  80 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 114  Q
    ||||||||||||||| |||||||||||||||||||    
T  4509335 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4509369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 4511177 - 4511211
Alignment:
Q  80 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 114  Q
    ||||||||||||||| |||||||||||||||||||    
T  4511177 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 6431501 - 6431467
Alignment:
Q  80 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 114  Q
    ||||||||||||||| |||||||||||||||||||    
T  6431501 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 6431467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 14070348 - 14070382
Alignment:
Q  80 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 114  Q
    |||||||| ||||||||||||||||||||||||||    
T  14070348 aaatcgtgccacgatgccaaaatcgtgtcacgatt 14070382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 14380376 - 14380410
Alignment:
Q  80 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 114  Q
    |||||||| ||||||||||||||||||||||||||    
T  14380376 aaatcgtgccacgatgccaaaatcgtgtcacgatt 14380410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 49092237 - 49092282
Alignment:
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 143  Q
    ||||||||||||| ||||| ||||||||||| || |||||||||||    
T  49092237 aaaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 4e-65; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 20622664 - 20622821
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  20622664 agcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaa 20622763  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20622764 attcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 20622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 9036159 - 9036003
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||||||||||||||||||||  |||| | ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  9036159 agcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaa 9036060  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9036059 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 40282116 - 40281958
Alignment:
Q  1 agcaagttt-cacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||| ||| ||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  40282116 agcaagtttgcacaatcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacctagctcacggcaccactaaatcgtgtcacgatgcca 40282017  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40282016 aattcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatctcaaca 40281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 21053697 - 21053540
Alignment:
Q  1 agcaagttt-cacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||| ||||| |||||||||||||||||||||    
T  21053697 agcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccttgcattctagctcactgcaccacgaaatcgtgtcacgatgcca 21053598  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21053597 aattcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 9986929 - 9986785
Alignment:
Q  14 atcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||  | ||||||||||||| ||||||||||| |||||| |||| |||||||||||    
T  9986929 atcgtgtcacgatttcccaaaatcgtgtcacgatttggcacactgcagaccagctcacggcaccacgaaatcgtgttacgatgtcaaattcgtgtcacga 9986830  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9986829 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9986785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 19365925 - 19365768
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||    
T  19365925 agcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaa 19365826  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  19365825 attcgtgtcacgatttctctgttctttcagaccacaaatttgaagtcaaatctcaaca 19365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 19361069 - 19360912
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||| ||||    
T  19361069 agcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaa 19360970  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  19360969 attcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 19360912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 24202376 - 24202251
Alignment:
Q  32 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 131  Q
    ||||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  24202376 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagac 24202277  T
Q  132 cacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||| ||||||||||||    
T  24202276 cacaaatttgaagccaaatctcaaca 24202251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 51765134 - 51764988
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||| | ||| ||||||||||||||| ||||||||||| | ||||||||||| | |||||||||||||||||| |||| |||||||||||    
T  51765134 atcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacga 51765035  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  51765034 tttctctgttcttccagaccacaaatttaaagccaaatctcaacaat 51764988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 44203374 - 44203217
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||||| | || |||||||||||| ||    
T  44203374 agcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattcc 44203277  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44203276 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 44203217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 41391030 - 41391178
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   ||| |||||||||||||||| |||||| |||||||| ||  ||||||| || |||||||||| | | ||||||||||||||| ||||    
T  41391030 agcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcatctc-aaatcgtgtcacgattccaa 41391128  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  41391129 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaa 41391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 44023533 - 44023389
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||||||||| | || |||||||||||| |||    
T  44023533 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattcca 44023435  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  44023434 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 44023389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 13604220 - 13604095
Alignment:
Q  32 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 131  Q
    |||||||||||||||||  ||| |||||| | |||||||| || | | |||||||| |||||| ||| ||||||||||||||||| ||||||||||| ||    
T  13604220 aaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaac 13604121  T
Q  132 cacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||    
T  13604120 cacaaatttgaagacaaatctcaaca 13604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 25439555 - 25439411
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||  ||||||||||||||||||||| |||||| |||||||||||| ||||||| || | ||||||||| | | |||||||||||||||  |     
T  25439555 agcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctcacggcatctc-aaatcgtgtcacgattacc 25439457  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  25439456 aaatcgtgtcacgattgctctgttcttccagaccacaaatttgaag 25439411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 39445926 - 39446070
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||  |||||||||| |||||||||| |||||| |||||||| ||  ||||||| || | ||||||||| | | ||||||||||||||| |||    
T  39445926 agcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcacggcatctc-aaatcgtgtcacgattcca 39446024  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  39446025 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 39446070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 25444746 - 25444604
Alignment:
Q  3 caagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaa 100  Q
    ||||||||  ||||||||||||||||||||| |||||| |||||||||||| ||| ||| || | ||||||||| | | |||||||||||||||  | ||    
T  25444746 caagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctcacggcatctc-aaatcgtgtcacgattaccaa 25444648  T
Q  101 atcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  25444647 atcgtgtcacgattgctctgttcttccagaccacaaatttgaag 25444604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 1054670 - 1054526
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || | ||||||||||| | || |||| ||||||| |||    
T  1054670 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcacggcacctccaa-tcgtatcacgattcca 1054572  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  1054571 aaatcgtgacacgatttctctgttcttccagaccacaaatttgaag 1054526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 24793803 - 24793709
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| |||||||||||||||||    
T  24793803 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 21536189 - 21536119
Alignment:
Q  80 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 150  Q
    ||||||||||||| ||   |||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  21536189 aaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 21536119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 24793723 - 24793678
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24793678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 26644517 - 26644390
Alignment:
Q  14 atcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    ||||||||||| |||| |||| ||||| ||||||||  |||| ||||| | |||||| | ||   | ||||||||| |||||| ||||||||| ||||||    
T  26644517 atcgtgtcacgttttcacaaaatcgtgccacgatttgacaccgtgcaaaccagctcatgacattacaaaatcgtgttacgatgacaaaatcgtatcacga 26644418  T
Q  113 tttccctgttcttccagaccacaaattt 140  Q
    || | ||||||||||| |||||||||||    
T  26644417 ttcctctgttcttccaaaccacaaattt 26644390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 3282273 - 3282335
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 161  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||| ||||| ||||||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaacaataa 3282335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 41398764 - 41398814
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaa 41398814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 13598967 - 13599012
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 13599012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 24786981 - 24786905
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcacc 76  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||    
T  24786981 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacc 24786905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 37070334 - 37070378
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 143  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaa 37070378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 41398685 - 41398778
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || |||||||||| | | |||||||||||||||    
T  41398685 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcatctc-aaatcgtgtcacgat 41398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 16124238 - 16124197
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 140  Q
    ||||||| |||||||||| ||||||||||| |||||||||||    
T  16124238 aaatcgtatcacgatttctctgttcttccaaaccacaaattt 16124197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 1192328 - 1192296
Alignment:
Q  79 gaaatcgtgtcacgatgccaaaatcgtgtcacg 111  Q
    ||||||||||||||||||||||||||| |||||    
T  1192328 gaaatcgtgtcacgatgccaaaatcgtatcacg 1192296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 31495758 - 31495902
Alignment:
Q  14 atcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  31495758 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacga 31495857  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31495858 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 31495902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 13992722 - 13992879
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  ||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||| || | ||||||||||||||||||||||    
T  13992722 agcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacgaaatcgtgtcacgatgccaa 13992821  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  13992822 attcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 24742421 - 24742565
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  24742421 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaa 24742520  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  24742521 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24742565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 28468134 - 28467977
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  ||||||||||||||| |||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||| ||||||||||    
T  28468134 agcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgttacgatgccaa 28468035  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  28468034 attcgtgtcacgatttctctgttcttccataccacaaatttgaagccaaatctcaaca 28467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 8393138 - 8392982
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||    
T  8393138 agcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatacc 8393041  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8393040 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 9224055 - 9223911
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||  |  |||||||||||||||||||||    
T  9224055 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaa 9223956  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  9223955 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9223911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 51520894 - 51521038
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   ||||||||| |||||||||| |||||| |||||||| ||  ||||||| |||||||||||| ||  |||||||||||||||||||||    
T  51520894 agcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaa 51520993  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  51520994 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 51521038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 7122423 - 7122274
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||    
T  7122423 agcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatccc 7122326  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7122325 aaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7122274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 7124645 - 7124496
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||    
T  7124645 agcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatccc 7124548  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 149  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7124547 aaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7124496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 5733090 - 5733235
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagct-cacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| ||||||||||||||| ||  ||||||| || ||| ||||||||| |||||||||||||||||||||    
T  5733090 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgcca 5733189  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||    
T  5733190 aaatcgtgtcatgatttctctgttctttcagaccacaaatttgaag 5733235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 56141668 - 56141523
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttg-caccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||| |  ||||||| |||||||||| | || | |||||||||||||||||||    
T  56141668 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaaactagctcacgacccctccaaatcgtgtcacgatgcca 56141569  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  56141568 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 56141523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 9228842 - 9228698
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| | ||||||||||  |  |||||||||||||||||||||    
T  9228842 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacgagctcacggccacttgaaatcgtgtcacgatgccaa 9228743  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  9228742 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9228698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 8395347 - 8395191
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  ||| |||||||||||| |||||||||||  ||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||    
T  8395347 agcaagtttctggattgtgtcacgattttcccaaatcgtgctacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatacc 8395250  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8395249 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 32 - 158
Target Start/End: Complemental strand, 31985252 - 31985126
Alignment:
Q  32 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 131  Q
    ||||||||||||||||| ||||||||| | ||||||||||| | | | ||||||||||||||||||||| ||||||||||||||| |||||||| ||||     
T  31985252 aaatcgtgtcacgatttggcaccctgctaactagctcacggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagat 31985153  T
Q  132 cacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||| |||||||||||||    
T  31985152 cacaaatttgaagccaaatctcaacaa 31985126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 3814450 - 3814609
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaa 100  Q
    ||||||||||   |||||||||||||||||||||||||| |||||||| ||  | ||||| || ||| ||||   |  ||||||||||||||||||||||    
T  3814450 agcaagtttctgaatcgtgtcacgatttcccaaatcgtgacacgatttggcgtcttgcaaacttgcttacggtcacttgaaatcgtgtcacgatgccaaa 3814549  T
Q  101 atcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 161  Q
    |||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||    
T  3814550 atcgtgtcacgatttctctgttcttccagaccacaaatttgaag-ccaatatcaacaataa 3814609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18856153 - 18856297
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| ||| || |||||||||||| || |||| || | ||||||||||| | || |||||||||||| |||    
T  18856153 agcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattcca 18856251  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  18856252 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 18856297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 44882193 - 44882122
Alignment:
Q  158 ataaatgataccaatactcctcactgaggtggcacatttattcaatacacataaagctcacctcttggatga 229  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44882193 ataaatgataccactactcctcactgaggtggcacatttattcaatacacataaagctcacctcttggatga 44882122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 5135806 - 5135648
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  5135806 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 5135709  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  5135708 caaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagac-aatctcaacaa 5135648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 5138032 - 5137875
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgc 96  Q
    ||||||||||  |||||||||||||||| ||  |||||||| |||||||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |    
T  5138032 agcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgatac 5137935  T
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  5137934 caaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagac-aatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 45347473 - 45347329
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||||||| | | || |||||||||||| |||    
T  45347473 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcatctctaa-tcgtgtcacgattcca 45347375  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||    
T  45347374 aaatcgtgtcacgatttctttgttcttccagaccacaaatttgaag 45347329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18712411 - 18712295
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||  |  |||||||||||||||||||||    
T  18712411 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaa 18712312  T
Q  100 aatcgtgtcacgatttc 116  Q
    |||||||||||||||||    
T  18712311 aatcgtgtcacgatttc 18712295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 18860406 - 18860509
Alignment:
Q  41 cacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatt 139  Q
    |||||||||||| || |||| || | ||||||||||| | || |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  18860406 cacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 18860504  T
Q  140 tgaag 144  Q
    |||||    
T  18860505 tgaag 18860509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 158
Target Start/End: Original strand, 5148177 - 5148303
Alignment:
Q  32 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 131  Q
    |||||||| |||||||   |||||||||| |||||||||| ||   | ||||||||||||| ||  ||||||||||||||||||| || |||||||| ||    
T  5148177 aaatcgtgccacgattggtcaccctgcaaactagctcacgacattgcaaaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaac 5148276  T
Q  132 cacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||| ||| | |||||||    
T  5148277 cacaaatttgaagccaattttcaacaa 5148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 29761102 - 29761196
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| |||||||||||||||||    
T  29761102 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 29761182 - 29761242
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 160  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  29761182 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag-caaatatcaacaata 29761242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 44864299 - 44864243
Alignment:
Q  173 actcctcactgaggtggcacatttattcaatacacataaagctcacctcttggatga 229  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  44864299 actcctcactcaggtaacacatttattcaatacacataaagctcacctcttggatga 44864243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 5143807 - 5143867
Alignment:
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||| | ||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 5143867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 8689097 - 8689049
Alignment:
Q  96 ccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 8689049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 44850040 - 44849988
Alignment:
Q  177 ctcactgaggtggcacatttattcaatacacataaagctcacctcttggatga 229  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||||||||||    
T  44850040 ctcaccgaggtgatacatttattcaatacacataaagctcacctcttggatga 44849988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 16628403 - 16628358
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 16628358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 38151968 - 38151923
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 38151923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 3778116 - 3778160
Alignment:
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 3778160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 5268750 - 5268704
Alignment:
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaag 5268704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 6742946 - 6742901
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaag 6742901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 10047932 - 10047977
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaag 10047977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 16622824 - 16622783
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 140  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattt 16622783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 8393219 - 8393187
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgat 46  Q
    |||||||||||||||||||||||||||||||||    
T  8393219 atcgtgtcacgatttcccaaatcgtgtcacgat 8393187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 8395428 - 8395396
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgat 46  Q
    |||||||||||||||||||||||||||||||||    
T  8395428 atcgtgtcacgatttcccaaatcgtgtcacgat 8395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 45356954 - 45356861
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacga 93  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||| || |||| | | |||||||||| | | ||||||||||||||    
T  45356954 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcatctc-aaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 36314761 - 36314716
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| || |||||| | |||||||||||||||    
T  36314761 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36314716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 36328970 - 36328925
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| || |||||| | |||||||||||||||    
T  36328970 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 54867745 - 54867790
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||| ||| || |||||||| |||||||||||||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaag 54867790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 9165 - 9308
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 113  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  9165 atcgtgtcacgatttcccaaatcatgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgat 9264  T
Q  114 ttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||    
T  9265 ttctctgttcttccagaccacaaatttgaagccaaatctcaaca 9308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 11610 - 11757
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||| |  |||||||||||||||||||||| ||||||||||||    
T  11610 atcgtgtcacgatttcccaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgat 11709  T
Q  114 ttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 161  Q
    ||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  11710 ttctctgttcttccagaccacaattttgaagccaaatctcaacaataa 11757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 17588 - 17430
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  ||| |||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||    
T  17588 agcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaa 17489  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    | ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  17488 attcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacaa 17430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 6266418 - 6266274
Alignment:
Q  14 atcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||| | |||||| ||||||||||| |||| |||||||||||    
T  6266418 atcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaattgtgtcacgatgtcaaattcgtgtcacga 6266319  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  6266318 tttccatgttcttccagaccacaaatttgaagacaaatctcaaca 6266274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 3492220 - 3492378
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||    
T  3492220 agcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaa 3492319  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    | ||||||||| ||||| |||||||| |||||||||||||||||| |||||||||||||    
T  3492320 attcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaaatctcaacaa 3492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 30833078 - 30832921
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| | |||||||||||||||||| |||    
T  30833078 agcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaa 30832979  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  30832978 attcatgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 30832921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 9296018 - 9295874
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||| ||||||| |||||||||||||||  |||||||||||||||||||||    
T  9296018 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaa 9295919  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  9295918 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9295874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 25410109 - 25410267
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| | | ||||||||| | | ||||||||||||||||||||    
T  25410109 agcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatcacaaaatcgtgtcacgatgccaa 25410208  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    | ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  25410209 attcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaaactcaacaa 25410267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 14291969 - 14292113
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  14291969 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgagatcgtgtcacgatgccaa 14292068  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  14292069 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 14292113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 4484779 - 4484924
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||| |  || ||||||||||||||| ||||||||||| ||||||||||||| |  |||||||||||||||||||||| |||||||||||    
T  4484779 atcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacga 4484878  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||    
T  4484879 tttctctgttcttccagaccacaaatttgaagtaaaatctcaacaa 4484924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 11098543 - 11098399
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||||||||  ||||||||||||| |||||||    
T  11098543 agcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcactatgccaa 11098444  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  11098443 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 11098399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 32289292 - 32289148
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||| | ||| ||||||||| ||||| ||||||||||| | ||||||||||| | | ||||||||||||||||||||| |||||||||||    
T  32289292 atcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacga 32289193  T
Q  113 tttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||    
T  32289192 tttctctgttcttccagaccacaaatttgaagccaaatctcaaca 32289148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 12647823 - 12647968
Alignment:
Q  13 gatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtca 109  Q
    |||||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||    
T  12647823 gatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtca 12647920  T
Q  110 cgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12647921 cgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 12647968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 40739334 - 40739457
Alignment:
Q  34 atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagacca 133  Q
    ||||||||||||||| ||||||||||| | |||||||||||   | ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  40739334 atcgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttgtctgttcttccagacca 40739433  T
Q  134 caaatttgaagacaaatctcaaca 157  Q
    ||||||||||| ||||||||||||    
T  40739434 caaatttgaagccaaatctcaaca 40739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 39811633 - 39811489
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || ||| ||||   |  |||||||||||||||||||||    
T  39811633 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttgcttacggtcacttgaaatcgtgtcacgatgccaa 39811534  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  39811533 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 39811489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 33 - 161
Target Start/End: Original strand, 32247229 - 32247356
Alignment:
Q  33 aatcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 131  Q
    ||||||| |||||||||||| || |||| || | ||||||||| | | ||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  32247229 aatcgtgccacgattttgcatccagcaaacttggctcacggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagac 32247327  T
Q  132 cacaaatttgaagacaaatctcaacaataa 161  Q
    ||||||||||||| | ||| ||||||||||    
T  32247328 cacaaatttgaag-ccaatatcaacaataa 32247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 44310548 - 44310483
Alignment:
Q  79 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44310548 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 44310483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 28258729 - 28258668
Alignment:
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||| ||||| |||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaacaa 28258668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 8389681 - 8389636
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 8389636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 36757477 - 36757430
Alignment:
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaag 36757430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 33528155 - 33528093
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 161  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||| ||| |  |||||||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattaacaacaataa 33528093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 10706783 - 10706738
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaag 10706738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 21630511 - 21630556
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaag 21630556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 39483443 - 39483488
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||| ||||| ||||||||||| |||||||||||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaag 39483488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 33118696 - 33118752
Alignment:
Q  103 cgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    |||||||||||||| || |||| ||| | ||||||||||||||||||| ||||||||    
T  33118696 cgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaatttcaacaat 33118752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 20522794 - 20522833
Alignment:
Q  105 tgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaag 20522833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 28258807 - 28258713
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||| |  |||||||||||||||| |||| | ||| ||||||||  |||||||||| | |||||||||||   | |||||||||||||||    
T  28258807 agcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 28258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 7450902 - 7450869
Alignment:
Q  14 atcgtgtcacgatttcccaaatcgtgtcacgatt 47  Q
    ||||||||||| ||||||||||||||||||||||    
T  7450902 atcgtgtcacgttttcccaaatcgtgtcacgatt 7450869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 23078002 - 23077957
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||| || |||||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaag 23077957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 22096 - 21939
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| || |||||||||||||||||||| ||||||||||||||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  22096 agcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaa 21997  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    | || |||| ||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  21996 attcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 3029 - 3185
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||    
T  3029 agcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatccc 3126  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3127 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6016 - 5859
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgattt--cccaaatcgtgtcacgattttgcaccctgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||||||||||||||||||||  ||  ||||||| ||||| |||||||||||||| | |||||||||||||| | || |||||||||||  ||    
T  6016 agcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaatttgcaccctgcaaccctagctcacggcacctccaa-tcgtgtcacgactcc 5918  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5917 aaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 5859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 8036 - 7911
Alignment:
Q  32 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 131  Q
    ||||||||||||||||| ||||||||||| | | ||||||||| | | ||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  8036 aaatcgtgtcacgatttggcaccctgcaaaccaactcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagac 7937  T
Q  132 cacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||| ||||||||||||    
T  7936 cacaaatttgaagccaaatctcaaca 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 4154 - 4310
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||  |||||||||||||||||||| ||||||| |||||||| |||||| ||||| | ||||||||||||||   ||||||||||||||| ||    
T  4154 agcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctcacggcaccta-aaatcgtgtcacgattcc 4251  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4252 aaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 3493 - 3349
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||| ||| ||||||||||||  |  ||||||||||||||||| |||    
T  3493 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaactagctcacggccacttgaaatcgtgtcacgatgtcaa 3394  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| || ||||||||||||||||||||||||    
T  3393 aatcgtgtcacgatttctcttttcttccagaccacaaatttgaag 3349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 789 - 933
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgcca 98  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||||||||| | || |||||||||||| |||    
T  789 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattcca 887  T
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  888 aaatcgtgtcacgatttctctgttcttccataccacaaatttgaag 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 132877 - 132752
Alignment:
Q  32 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 131  Q
    |||||||||||||||||  ||| |||||| | |||||||| || | | |||||||| |||||| ||| ||||||||||||||||| ||||||||||| ||    
T  132877 aaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaac 132778  T
Q  132 cacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||||||||||||    
T  132777 cacaaatttgaagacaaatctcaaca 132752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 6252 - 6297
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 6297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 3060 - 3105
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaag 3105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 626 - 523
Alignment:
Q  14 atcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 112  Q
    |||||||||||||| | ||| ||||||||||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  626 atcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacga 527  T
Q  113 tttc 116  Q
    ||||    
T  526 tttc 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 34710 - 34566
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  | ||||| | | || |||||  |  ||||| |||||||||||||||    
T  34710 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcatgcaaacaaactaacggccacttgaaatagtgtcacgatgccaa 34611  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  34610 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 34566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 1240 - 1083
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  |||||||||||||||| |||| ||||  ||||||||  |||||||||| | | ||||||  |   | ||||||||||||||||||||    
T  1240 agcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaa 1141  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 157  Q
    ||||||||||||||||  |||||||| || ||||||||||||||| ||||| ||||||    
T  1140 aatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 1784 - 1721
Alignment:
Q  81 aatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1721  T

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Target: scaffold0087 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 43591 - 43441
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaa 99  Q
    ||||||||| |  ||| |||||||||||| |||| ||||  ||||||||  ||||||| || | |||||||| ||   | |||||||||||||||||||     
T  43591 agcaagtttgaaaatcatgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcacgacattacaaaatcgtgtcacgatgccac 43492  T
Q  100 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 150  Q
    ||||||||||||||||| || |||||||| |||| |||||||||| |||||    
T  43491 aatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaaat 43441  T

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Target: scaffold0087; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 36384 - 36322
Alignment:
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 159  Q
    ||||||||| ||| |||||| ||||||||||| ||||||||||||||| ||| | ||||||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaattttcaacaat 36322  T

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Target: scaffold0098 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 45744 - 45805
Alignment:
Q  97 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 158  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 45805  T

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Target: scaffold0665 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 8216 - 8261
Alignment:
Q  99 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 8261  T

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Target: scaffold0665; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 8136 - 8230
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 94  Q
    ||||||||||   ||||||||||||||| |||| |||||| |||||||| ||  ||||||| ||||||||||||  |  ||||||||||||||||    
T  8136 agcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgat 8230  T

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Target: scaffold0259 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 1895 - 1751
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggca-ccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||| ||  ||||||  ||||||||||||  |    
T  1895 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccga--tcgtgtcacgattgc 1798  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
     |||||||| ||||||| | ||||||||||| ||||| |||||||||    
T  1797 caaatcgtgacacgattcctctgttcttccaaaccactaatttgaag 1751  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 148600 - 148456
Alignment:
Q  1 agcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacggca-ccccgaaatcgtgtcacgatgcc 97  Q
    ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | ||||| ||  ||||||  ||||||||||||  |    
T  148600 agcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccga--tcgtgtcacgattgc 148503  T
Q  98 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 144  Q
     |||||||| ||||||| | ||||||||||| ||||| |||||||||    
T  148502 caaatcgtgacacgattcctctgttcttccaaaccactaatttgaag 148456  T

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Target: scaffold0466 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 6784 - 6750
Alignment:
Q  80 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 114  Q
    |||||||| ||||||||||||||||||||||||||    
T  6784 aaatcgtgccacgatgccaaaatcgtgtcacgatt 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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