View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6876A_low_368 (Length: 229)
Name: NF6876A_low_368
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6876A_low_368 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 37672767 - 37672995
Alignment:
| Q |
1 |
tcaagcattcctccatcaaaatcacctgcaatcctgaccggtatattctctttctttttcacctcgtacttgccagatatgttgtctgtggtcgtacttg |
100 |
Q |
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| T |
37672767 |
tcaagcattcctccatcaaaatcacctgcaatcctgaccggtatattctctttctttttcacctcgtacttgccagatatgttgtctgtggtggtacttg |
37672866 |
T |
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| Q |
101 |
gatcagttggaagctgattagaaaatgtaaccccagtggacctattcaaaccaacaggaacgaggttgttaccagaagataagagtgtgtgtcgtaacct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37672867 |
gatcagttggaagctgattagaaaatgtaaccccagtggacctattcaaaccaacaggaacgaggttgttaccagaagataagagtgtgtgtcgtaacct |
37672966 |
T |
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| Q |
201 |
acacatggaagcttgcaacatagcacagg |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
37672967 |
acacatggaagcttgcaacatagcacagg |
37672995 |
T |
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