View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6876A_low_433 (Length: 215)

Name: NF6876A_low_433
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6876A_low_433
NF6876A_low_433
[»] chr6 (28 HSPs)
chr6 (17-81)||(4898609-4898673)
chr6 (9-97)||(33730471-33730559)
chr6 (15-90)||(18154501-18154576)
chr6 (15-97)||(18102638-18102720)
chr6 (21-97)||(4838226-4838301)
chr6 (9-97)||(30525509-30525597)
chr6 (9-97)||(32194166-32194253)
chr6 (9-91)||(11010071-11010153)
chr6 (19-97)||(11742273-11742350)
chr6 (16-97)||(31133041-31133123)
chr6 (16-97)||(4898290-4898371)
chr6 (16-86)||(1370063-1370134)
chr6 (16-86)||(11100545-11100616)
chr6 (16-69)||(9955960-9956014)
chr6 (16-97)||(29646167-29646249)
chr6 (9-78)||(3438148-3438217)
chr6 (16-86)||(4184424-4184496)
chr6 (9-88)||(15718167-15718246)
chr6 (16-95)||(27828476-27828556)
chr6 (16-86)||(8171838-8171909)
chr6 (39-90)||(9955743-9955794)
chr6 (9-52)||(21970049-21970092)
chr6 (9-87)||(14488258-14488336)
chr6 (39-88)||(11100330-11100379)
chr6 (16-64)||(15962902-15962951)
chr6 (39-88)||(29646414-29646463)
chr6 (18-97)||(16599236-16599316)
chr6 (9-53)||(26211434-26211478)
[»] chr4 (53 HSPs)
chr4 (9-97)||(14862928-14863016)
chr4 (9-97)||(26335696-26335784)
chr4 (8-90)||(14948085-14948167)
chr4 (9-88)||(26958520-26958599)
chr4 (9-90)||(6946607-6946688)
chr4 (9-97)||(9744300-9744388)
chr4 (7-90)||(142596-142679)
chr4 (16-86)||(578923-578994)
chr4 (9-88)||(6137667-6137746)
chr4 (9-88)||(33811009-33811088)
chr4 (9-90)||(6193124-6193205)
chr4 (16-97)||(49426124-49426205)
chr4 (9-97)||(29101940-29102028)
chr4 (9-97)||(46106629-46106717)
chr4 (9-97)||(52306723-52306811)
chr4 (16-86)||(48559981-48560052)
chr4 (17-88)||(50677907-50677978)
chr4 (16-97)||(7630029-7630111)
chr4 (16-97)||(12584450-12584532)
chr4 (16-97)||(17180922-17181004)
chr4 (9-87)||(43638942-43639020)
chr4 (17-86)||(16553391-16553460)
chr4 (16-88)||(18470238-18470311)
chr4 (9-97)||(4490621-4490708)
chr4 (16-91)||(52437601-52437679)
chr4 (9-64)||(4712645-4712700)
chr4 (16-86)||(6213966-6214037)
chr4 (16-86)||(14203034-14203105)
chr4 (39-90)||(17181172-17181223)
chr4 (15-97)||(33105866-33105949)
chr4 (9-88)||(38425820-38425899)
chr4 (10-97)||(54742403-54742490)
chr4 (39-97)||(578697-578755)
chr4 (39-97)||(10216192-10216250)
chr4 (15-89)||(13211651-13211725)
chr4 (22-88)||(20459163-20459229)
chr4 (16-81)||(42808075-42808141)
chr4 (17-86)||(51784135-51784205)
chr4 (40-97)||(3818966-3819022)
chr4 (15-78)||(4505566-4505629)
chr4 (16-86)||(10981465-10981536)
chr4 (16-86)||(30820653-30820724)
chr4 (39-97)||(5046581-5046639)
chr4 (16-81)||(13621086-13621152)
chr4 (16-97)||(41172382-41172464)
chr4 (16-97)||(50182147-50182229)
chr4 (39-88)||(5157217-5157266)
chr4 (39-88)||(32012834-32012883)
chr4 (39-88)||(50182392-50182441)
chr4 (19-86)||(13211798-13211866)
chr4 (16-86)||(17745133-17745202)
chr4 (9-53)||(40496311-40496355)
chr4 (4-88)||(49605983-49606067)
[»] chr3 (43 HSPs)
chr3 (9-90)||(17604882-17604963)
chr3 (9-97)||(31039718-31039806)
chr3 (9-88)||(36823907-36823986)
chr3 (9-90)||(33837975-33838056)
chr3 (9-89)||(22894910-22894990)
chr3 (9-88)||(3800148-3800227)
chr3 (8-97)||(27359940-27360029)
chr3 (9-90)||(53581509-53581590)
chr3 (15-97)||(26103782-26103864)
chr3 (9-87)||(48765374-48765452)
chr3 (16-86)||(6114739-6114810)
chr3 (16-86)||(7848485-7848556)
chr3 (9-88)||(13349087-13349166)
chr3 (16-97)||(6109330-6109412)
chr3 (9-97)||(1376159-1376246)
chr3 (9-97)||(53467512-53467600)
chr3 (16-86)||(8815290-8815361)
chr3 (16-86)||(21408648-21408719)
chr3 (16-86)||(21727603-21727674)
chr3 (16-86)||(47461652-47461723)
chr3 (16-81)||(11460113-11460179)
chr3 (39-97)||(21727840-21727898)
chr3 (39-97)||(26152452-26152510)
chr3 (24-97)||(45293131-45293205)
chr3 (9-62)||(8814756-8814809)
chr3 (9-53)||(27317626-27317670)
chr3 (16-86)||(4043586-4043657)
chr3 (39-90)||(6109113-6109164)
chr3 (16-86)||(12896595-12896666)
chr3 (16-86)||(17226340-17226411)
chr3 (16-86)||(26158398-26158469)
chr3 (16-86)||(27728149-27728220)
chr3 (16-97)||(2868329-2868411)
chr3 (39-97)||(6114976-6115034)
chr3 (39-97)||(6748592-6748650)
chr3 (39-97)||(17226144-17226202)
chr3 (16-97)||(45059698-45059780)
chr3 (39-88)||(3269184-3269233)
chr3 (39-88)||(17065920-17065969)
chr3 (9-86)||(50913161-50913238)
chr3 (16-64)||(34277649-34277697)
chr3 (16-63)||(51148177-51148225)
chr3 (39-91)||(52654509-52654561)
[»] chr8 (48 HSPs)
chr8 (9-97)||(29125663-29125750)
chr8 (9-88)||(26042902-26042981)
chr8 (9-88)||(35550553-35550632)
chr8 (10-97)||(32069177-32069264)
chr8 (9-86)||(23053813-23053890)
chr8 (15-88)||(32512195-32512268)
chr8 (9-97)||(2823554-2823642)
chr8 (9-97)||(8258274-8258362)
chr8 (9-97)||(26867875-26867963)
chr8 (9-88)||(13468262-13468341)
chr8 (9-87)||(3369867-3369945)
chr8 (15-88)||(1281845-1281918)
chr8 (9-97)||(17952582-17952670)
chr8 (9-97)||(30633017-30633105)
chr8 (9-97)||(36901243-36901331)
chr8 (9-88)||(30207323-30207402)
chr8 (25-87)||(42556834-42556896)
chr8 (16-97)||(29377834-29377915)
chr8 (9-53)||(184263-184307)
chr8 (9-97)||(26630178-26630266)
chr8 (9-64)||(1201825-1201880)
chr8 (9-88)||(23161280-23161359)
chr8 (9-64)||(25128027-25128082)
chr8 (17-67)||(25281115-25281166)
chr8 (9-88)||(27545916-27545995)
chr8 (16-78)||(30578033-30578096)
chr8 (9-87)||(32486889-32486967)
chr8 (15-64)||(10616453-10616502)
chr8 (16-97)||(42556498-42556578)
chr8 (9-53)||(5946783-5946827)
chr8 (16-86)||(3154069-3154140)
chr8 (16-86)||(5642482-5642553)
chr8 (16-86)||(5644423-5644494)
chr8 (16-86)||(9483813-9483884)
chr8 (16-78)||(19971401-19971464)
chr8 (16-78)||(21021349-21021412)
chr8 (16-86)||(21442292-21442363)
chr8 (27-69)||(9413982-9414024)
chr8 (16-69)||(14826270-14826324)
chr8 (9-87)||(18804945-18805023)
chr8 (16-81)||(31071717-31071783)
chr8 (15-97)||(39934354-39934435)
chr8 (39-88)||(3154268-3154317)
chr8 (39-88)||(4018734-4018783)
chr8 (39-88)||(14819257-14819306)
chr8 (15-88)||(34103162-34103235)
chr8 (9-69)||(35067352-35067411)
chr8 (9-53)||(44874130-44874174)
[»] chr1 (43 HSPs)
chr1 (9-97)||(463467-463555)
chr1 (9-85)||(26843152-26843228)
chr1 (9-88)||(13157714-13157793)
chr1 (9-88)||(50559404-50559483)
chr1 (9-97)||(16005517-16005605)
chr1 (9-88)||(34515285-34515364)
chr1 (9-97)||(27787955-27788044)
chr1 (9-79)||(6192580-6192650)
chr1 (9-91)||(32155942-32156024)
chr1 (9-90)||(5491756-5491837)
chr1 (16-97)||(32374482-32374562)
chr1 (9-86)||(32994325-32994402)
chr1 (16-86)||(20411359-20411430)
chr1 (16-86)||(28094383-28094454)
chr1 (15-69)||(13157429-13157483)
chr1 (39-97)||(20411135-20411193)
chr1 (16-86)||(23413601-23413671)
chr1 (39-97)||(47131103-47131160)
chr1 (16-88)||(12010473-12010545)
chr1 (39-88)||(20201886-20201935)
chr1 (15-80)||(51431815-51431880)
chr1 (9-97)||(8642949-8643037)
chr1 (9-53)||(13264528-13264572)
chr1 (9-97)||(24770784-24770872)
chr1 (9-97)||(41146203-41146291)
chr1 (9-53)||(42199850-42199894)
chr1 (9-53)||(42208718-42208762)
chr1 (9-97)||(45818735-45818822)
chr1 (16-86)||(12864244-12864315)
chr1 (16-86)||(13943424-13943495)
chr1 (16-86)||(14387562-14387633)
chr1 (16-86)||(14494531-14494602)
chr1 (16-86)||(32716358-32716429)
chr1 (9-64)||(34306598-34306653)
chr1 (16-69)||(27255814-27255868)
chr1 (39-97)||(36817588-36817646)
chr1 (9-90)||(158569-158649)
chr1 (9-97)||(3979532-3979621)
chr1 (15-88)||(14387414-14387487)
chr1 (39-88)||(27255599-27255648)
chr1 (15-64)||(28454691-28454740)
chr1 (27-88)||(32379467-32379528)
chr1 (17-64)||(4158270-4158318)
[»] chr7 (37 HSPs)
chr7 (9-88)||(27168407-27168486)
chr7 (9-97)||(6559311-6559399)
chr7 (15-87)||(19069360-19069432)
chr7 (9-88)||(938858-938937)
chr7 (16-97)||(20516873-20516955)
chr7 (9-90)||(2936601-2936682)
chr7 (9-90)||(25818445-25818526)
chr7 (9-97)||(454058-454146)
chr7 (9-97)||(38368010-38368098)
chr7 (9-97)||(41037312-41037400)
chr7 (16-81)||(24720230-24720296)
chr7 (9-78)||(3512758-3512827)
chr7 (9-69)||(28912064-28912124)
chr7 (9-86)||(27811906-27811984)
chr7 (9-86)||(33889046-33889124)
chr7 (9-86)||(41407307-41407384)
chr7 (9-64)||(2362739-2362794)
chr7 (16-87)||(2509481-2509552)
chr7 (24-86)||(7437969-7438032)
chr7 (16-86)||(18199532-18199603)
chr7 (16-86)||(45225224-45225295)
chr7 (16-81)||(8048131-8048197)
chr7 (28-97)||(11766077-11766145)
chr7 (9-69)||(6736665-6736725)
chr7 (9-69)||(18352470-18352530)
chr7 (16-86)||(4655009-4655080)
chr7 (16-86)||(27596984-27597055)
chr7 (9-51)||(15957368-15957410)
chr7 (16-97)||(26380238-26380320)
chr7 (39-97)||(45225594-45225652)
chr7 (39-88)||(4655250-4655299)
chr7 (39-88)||(18199773-18199822)
chr7 (40-97)||(34986479-34986536)
chr7 (16-88)||(48454707-48454780)
chr7 (16-79)||(14777898-14777962)
chr7 (16-79)||(15230036-15230100)
chr7 (40-88)||(20517122-20517170)
[»] chr5 (47 HSPs)
chr5 (9-86)||(12910178-12910255)
chr5 (9-81)||(39038473-39038545)
chr5 (9-86)||(4737881-4737958)
chr5 (9-90)||(6436368-6436449)
chr5 (9-97)||(2528706-2528793)
chr5 (9-97)||(13711189-13711277)
chr5 (9-81)||(31240400-31240472)
chr5 (9-97)||(39548996-39549083)
chr5 (16-81)||(1921417-1921482)
chr5 (9-90)||(10951000-10951081)
chr5 (19-88)||(17233078-17233147)
chr5 (9-97)||(3038825-3038913)
chr5 (17-97)||(25912206-25912285)
chr5 (16-87)||(30688079-30688151)
chr5 (9-88)||(40234230-40234309)
chr5 (15-97)||(6261153-6261235)
chr5 (9-91)||(8410774-8410856)
chr5 (16-97)||(15808911-15808993)
chr5 (16-97)||(30486050-30486132)
chr5 (9-97)||(2695251-2695337)
chr5 (15-88)||(28747709-28747782)
chr5 (9-53)||(14369749-14369793)
chr5 (9-88)||(17421641-17421720)
chr5 (16-86)||(29302269-29302340)
chr5 (16-86)||(33833218-33833289)
chr5 (39-97)||(17605228-17605286)
chr5 (9-90)||(22701899-22701981)
chr5 (39-97)||(37249490-37249548)
chr5 (16-67)||(11448703-11448755)
chr5 (16-88)||(37468492-37468564)
chr5 (17-80)||(38661179-38661243)
chr5 (9-64)||(4083709-4083764)
chr5 (16-86)||(7014477-7014548)
chr5 (15-90)||(31752391-31752466)
chr5 (16-86)||(33026179-33026250)
chr5 (16-97)||(4736735-4736817)
chr5 (39-97)||(4736979-4737037)
chr5 (39-97)||(17209815-17209873)
chr5 (16-69)||(17210037-17210091)
chr5 (9-51)||(33696037-33696079)
chr5 (19-88)||(857856-857925)
chr5 (15-64)||(7944258-7944307)
chr5 (37-97)||(7014688-7014748)
chr5 (39-87)||(15809159-15809207)
chr5 (9-97)||(17233428-17233516)
chr5 (16-67)||(26905868-26905920)
chr5 (39-91)||(30667528-30667580)
[»] chr2 (39 HSPs)
chr2 (9-97)||(34082720-34082808)
chr2 (9-97)||(37169709-37169797)
chr2 (9-90)||(18370385-18370466)
chr2 (9-88)||(16513036-16513115)
chr2 (16-90)||(13001982-13002056)
chr2 (16-97)||(39906445-39906527)
chr2 (9-90)||(33740107-33740188)
chr2 (9-88)||(23664902-23664981)
chr2 (16-97)||(3769403-3769485)
chr2 (9-86)||(6332444-6332522)
chr2 (16-81)||(7682179-7682245)
chr2 (17-87)||(27337049-27337119)
chr2 (16-97)||(30406636-30406718)
chr2 (16-81)||(29512044-29512109)
chr2 (9-88)||(1750151-1750230)
chr2 (16-86)||(22711208-22711279)
chr2 (9-88)||(41527821-41527900)
chr2 (26-97)||(41927549-41927620)
chr2 (16-86)||(44542809-44542880)
chr2 (17-86)||(4293380-4293450)
chr2 (9-51)||(11675306-11675348)
chr2 (15-85)||(17265430-17265500)
chr2 (16-97)||(23234001-23234083)
chr2 (16-97)||(33173448-33173530)
chr2 (15-97)||(45629826-45629908)
chr2 (16-79)||(2586348-2586412)
chr2 (16-86)||(38986921-38986990)
chr2 (16-78)||(9689551-9689614)
chr2 (39-90)||(30406420-30406471)
chr2 (39-90)||(33173694-33173745)
chr2 (9-64)||(42850169-42850224)
chr2 (15-88)||(16075007-16075078)
chr2 (16-69)||(20939885-20939939)
chr2 (39-97)||(23175344-23175402)
chr2 (39-97)||(23586601-23586659)
chr2 (16-97)||(39904604-39904685)
chr2 (36-65)||(29514295-29514324)
chr2 (9-81)||(8386853-8386925)
chr2 (17-88)||(15554198-15554270)
[»] scaffold0217 (1 HSPs)
scaffold0217 (9-88)||(20775-20854)
[»] scaffold0015 (1 HSPs)
scaffold0015 (9-88)||(9888-9966)
[»] scaffold0627 (1 HSPs)
scaffold0627 (9-64)||(4046-4101)
[»] scaffold0002 (1 HSPs)
scaffold0002 (16-97)||(452530-452612)
[»] scaffold0325 (1 HSPs)
scaffold0325 (17-81)||(6508-6572)
[»] scaffold0068 (2 HSPs)
scaffold0068 (16-86)||(57857-57928)
scaffold0068 (39-97)||(58094-58152)
[»] scaffold0074 (1 HSPs)
scaffold0074 (16-81)||(26216-26282)
[»] scaffold1808 (1 HSPs)
scaffold1808 (9-88)||(522-605)
[»] scaffold0778 (1 HSPs)
scaffold0778 (39-97)||(6213-6270)
[»] scaffold0418 (1 HSPs)
scaffold0418 (9-53)||(5680-5724)
[»] scaffold0193 (1 HSPs)
scaffold0193 (16-52)||(22779-22815)


Alignment Details
Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 4898609 - 4898673
Alignment:
Q  17 ttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  4898609 ttaaatacaccttaaggtgtagcttgctaaaacactcatacataaaaattagtggatgtgttcta 4898673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 33730559 - 33730471
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  33730559 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatat 33730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 18154576 - 18154501
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||||    
T  18154576 agttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctc 18154501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 18102720 - 18102638
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||| |||| ||||||||||| ||||||  |||||||    
T  18102720 agttaaatacaccttcaggtgtagcttgctaaaacactcccacataaaaactagtcgatgtgttctagcaaatccatatatat 18102638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 4838301 - 4838226
Alignment:
Q  21 atacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  4838301 atacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatc-ctatatat 4838226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 30525509 - 30525597
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||  ||||||||| || | | ||||||||| |||| | ||||||||    
T  30525509 aaaagtagttaaatacaccttaaggtgcagcttgctaaaacactcccacataaaaactaatgggtgtgttctagcaaacccctatatat 30525597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 32194253 - 32194166
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||   |||| |||| |||| ||||||||||| ||||| |||||||||    
T  32194253 aaaagtagttaaatacaccttaaggtgtagcttactaaaacacttccacatgaaaactagtggatgtgttctagcaaat-tctatatat 32194166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 11010071 - 11010153
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctct 91  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||||  | ||||||| |||| | |||||| || |||||||||    
T  11010071 aaaagtagttaaatacatcttaaggtgtagcttgctaaaacactcccatataaaaactagtgggtgtgttatagcaaatctct 11010153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 11742350 - 11742273
Alignment:
Q  19 aaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||| ||||||||||| |||||||||||||||||    ||||||||||||| | |||||||||||||||| ||||||||    
T  11742350 aaatgcaccttaaggtgtagcttgctaaaacacttcctcataaaaattagtgggtgtgttctaacaaatc-ctatatat 11742273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 31133041 - 31133123
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||||  |||||||    
T  31133041 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccatatatat 31133123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 4898290 - 4898371
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||| | ||| ||||||||||||| ||||  ||||||||| |||| | ||||||||||||||| | |||||||    
T  4898290 gttaaatacacctcatggtgtagcttgctaaaatactcccacataaaaagtagtgggtgtgttctaacaaatatatatatat 4898371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 1370063 - 1370134
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  1370063 gttaaatacaccttaaggtgtagctttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaa 1370134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 11100545 - 11100616
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| |||||| |||| ||||    
T  11100545 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtagatgtgatctagcaaa 11100616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 9955960 - 9956014
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagt 69  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||| ||||    
T  9955960 gttaaatacaccttaaggtgtagctttgctaaaacactcctacataaaaactagt 9956014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29646249 - 29646167
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||| ||| ||||||||||  ||||||||| |||| | ||||||||| |||| | ||||||||    
T  29646249 gttaaatacaccttaaggtgtagctttgttaaaacactcccacataaaaactagtgggtgtgttctagcaaacccctatatat 29646167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 3438148 - 3438217
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgtt 78  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||   ||||||||| |||| | ||||||    
T  3438148 aaaagtagttaaatacaccttaaggtgtagcttactaaaacacttccacataaaaactagtgggtgtgtt 3438217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 4184424 - 4184496
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaa-ttagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| ||||||||||||||  |||||||||  |||| ||||||||||| ||||    
T  4184424 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaacctagtggatgtgttctagcaaa 4184496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 15718246 - 15718167
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttga-tgtgttctaacaaatc 88  Q
    ||||| |||||||| ||||||||||| ||||||||||||||| ||  ||||||||| || |||| ||||||||| ||||||    
T  15718246 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaacattcccacataaaaacta-ttgagtgtgttctagcaaatc 15718167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 27828476 - 27828556
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatat 95  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||  |||| | ||||||||| |||| | ||||||    
T  27828476 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaagctagtgggtgtgttctagcaaacccctatat 27828556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 8171909 - 8171838
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||||  |||| | |||||| ||||||||||||  |||||||||||||| ||||||||||| ||||    
T  8171909 gttaaatacactctaagttatagctttgctaaaacactcccacataaaaattagtggatgtgttctagcaaa 8171838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 9955794 - 9955743
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||||    
T  9955794 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatctc 9955743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 21970049 - 21970092
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacact 52  Q
    ||||| |||||||||||||||||| | |||||||||||||||||    
T  21970049 aaaagtagttaaatacaccttaagatgtagcttgctaaaacact 21970092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 14488336 - 14488258
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    ||||| |||||||||||   |||||| |||||| ||||||||||| |||||||||  |||| || |||||||| |||||    
T  14488336 aaaagtagttaaatacattctaaggtgtagcttactaaaacactcctacataaaatctagtggacgtgttctagcaaat 14488258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 11100379 - 11100330
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  ||||||||| |||| | ||||||||||||||||    
T  11100379 cttgctaaaacactcccacataaaaactagtgggtgtgttctaacaaatc 11100330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 15962902 - 15962951
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaa 64  Q
    ||||||||||||||||||| |||| ||||||||||||||  |||||||||    
T  15962902 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaa 15962951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 29646414 - 29646463
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  29646414 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 29646463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 16599236 - 16599316
Alignment:
Q  18 taaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||| |||| ||| ||||||||||  ||||||||| ||||   ||||||||| |||| | ||||||||    
T  16599236 taaatacaccttaaggtgtagctttggtaaaacactcccacataaaaactagtgagtgtgttctagcaaacccctatatat 16599316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 26211434 - 26211478
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| ||| || ||||||||||||| ||||||||||||||||||    
T  26211434 aaaagtagtcaagtacaccttaaggtgtagcttgctaaaacactc 26211478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 14863016 - 14862928
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | |||||||||||||||| ||||||||    
T  14863016 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctaacaaatccctatatat 14862928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 26335784 - 26335696
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||| ||||||||| ||||||  |||||||    
T  26335784 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagttggtgtgttctagcaaatccatatatat 26335696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 14948167 - 14948085
Alignment:
Q  8 taaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    |||||| |||||||||||||||||| | |||||||||||||| ||| |||||||||| |||| | ||||||||||||||||||    
T  14948167 taaaagtagttaaatacaccttaagatgtagcttgctaaaaccctcctacataaaaactagtgggtgtgttctaacaaatctc 14948085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 26958599 - 26958520
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||    
T  26958599 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatc 26958520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 6946688 - 6946607
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||||    
T  6946688 aaaagtagttaaatacactttaaggtgtagcttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaatctc 6946607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 9744300 - 9744388
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| || |||||||||| ||||  ||||||||| |||| ||||||||||| ||||||  |||||||    
T  9744300 aaaagtagttaaatacaccttaaggtgtaacttgctaaaatactctcacataaaaactagtggatgtgttctagcaaatccatatatat 9744388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 142679 - 142596
Alignment:
Q  7 ttaaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||||| ||| |||| ||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||||    
T  142679 ttaaaagtagtgaaatgcaccttaaggtgtagcttgctaaaacactccaacataaaaactagtgggtgtgttctagcaaatctc 142596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 578923 - 578994
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| | ||| ||||||||||    
T  578923 gttaaatacaccttaaggtgtagctttgctaaaacactcatacataaaaactagtgggtgtattctaacaaa 578994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 6137667 - 6137746
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||    
T  6137667 aaaagtagttaaatgcaccttaaggtatagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatc 6137746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 33811088 - 33811009
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||  ||||||||| |||| ||||||||||| ||||||    
T  33811088 aaaagtagttaaatgcaccttaaggtatagcttgttaaaacactcccacataaaaactagtggatgtgttctagcaaatc 33811009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 6193124 - 6193205
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||  ||||||||| ||||   ||||||||| ||||||||    
T  6193124 aaaagtagttaaatacaccctaaggtgtagcttgctaaaacactccaacataaaaactagtatgtgtgttctagcaaatctc 6193205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 49426124 - 49426205
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| ||| ||||||||||||||  ||||||||| |||| | ||||||||| ||||||  |||||||    
T  49426124 gttaaatacaccttaaggtgtaggttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaatccatatatat 49426205  T

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Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 29102028 - 29101940
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||| ||||| | |||||| ||||||||||| |||||||||| |||| | ||||||||| |||||  ||||||||    
T  29102028 aaaagtagttaaatacacattaagatgtagcttactaaaacactcctacataaaaactagtgggtgtgttctagcaaattcctatatat 29101940  T

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Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 46106717 - 46106629
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||| |||||||||||||||  |||||||||||||||||  ||||||||| |||| | ||||||||| ||||||  |||||||    
T  46106717 aaaagtagttgaatacaccttaaggtggagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccatatatat 46106629  T

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Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 52306811 - 52306723
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||   |||||||| |||| | ||||||||| ||||| | |||||||    
T  52306811 aaaagtagttaaatacaccttaaggtgtaggttgctaaaacactctcccataaaaactagtgggtgtgttctagcaaatatatatatat 52306723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 48560052 - 48559981
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||||||||||||| | ||||||||| ||||    
T  48560052 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 48559981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 50677978 - 50677907
Alignment:
Q  17 ttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||||| |||| || |||||||||| |||||||||| |||| | ||| ||||||||||||    
T  50677978 ttaaatacaccttaaggtatagcatgataaaacactcctacataaaaactagtgggtgtattctaacaaatc 50677907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 7630111 - 7630029
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| |||| || |||||||    
T  7630111 gttaaatacaccttaaggtgtagctttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaacctatatatat 7630029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 12584450 - 12584532
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||||| |||| |||||||  ||||||||| |||| | |||||||||||||| | ||||||||    
T  12584450 gttaaatacaccttaaggtgtagctttgctagaacactcccacataaaaactagtgggtgtgttctaacaaacccctatatat 12584532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 17181004 - 17180922
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| |||| || |||||||    
T  17181004 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacctatatatat 17180922  T

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Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 43639020 - 43638942
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||   |||||||||||| |  |||||||||| |||||    
T  43639020 aaaagcagttaaatacaccttaaggtgtagcttgctaaaatacttccacataaaaattaatgaatgtgttctagcaaat 43638942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 16553460 - 16553391
Alignment:
Q  17 ttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||||||||||| |||||||||||||||||   ||||||||| |||| | ||| ||||||||||    
T  16553460 ttaaatacaccttaaggtgtagcttgctaaaacacttccacataaaaactagtgggtgtattctaacaaa 16553391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 18470311 - 18470238
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||||||||||||||||| ||| || ||||||||||||  ||||||||| |||| | ||||||||||||||||    
T  18470311 gttaaatacaccttaaggtgtagttttgctaaaacactcccacataaaaactagtgggtgtgttctaacaaatc 18470238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 4490708 - 4490621
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||||||||||||  |||| | ||||||| ||||||||||  |||||||||||||| | ||||||||| |||||| ||||||||    
T  4490708 aaaagtagttaaatacacgctaagatgtagcttgttaaaacactcccacataaaaattagtgggtgtgttctagcaaatc-ctatatat 4490621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 52437601 - 52437679
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaatt---agttgatgtgttctaacaaatctct 91  Q
    ||||||||||||||||||| ||| ||||||||||||||  ||||||| |||   ||| ||||| |||||||||||||||    
T  52437601 gttaaatacaccttaaggtgtagtttgctaaaacactcccacataaatattctaagtggatgtattctaacaaatctct 52437679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 4712700 - 4712645
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||  |||||||||    
T  4712700 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaacactcccacataaaaa 4712645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 6214037 - 6213966
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||||||||| || |||||| ||||||||||||  ||||||||| |||| ||||||||||| ||||    
T  6214037 gttaaatacaccttaaagtgtagctttgctaaaacactctcacataaaaactagtggatgtgttctagcaaa 6213966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 14203034 - 14203105
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  14203034 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 14203105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 17181172 - 17181223
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    |||||||||||||||  |||||||||||||| ||||| ||||||||||||||    
T  17181172 cttgctaaaacactcccacataaaaattagtggatgttttctaacaaatctc 17181223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 33105949 - 33105866
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagt-tgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||||||| ||||||||||||| ||||  ||||||||| ||||  |||||||| || ||||||  |||||||    
T  33105949 agttaaatacaccttaaggtgtagcttgctaaaatactcccacataaaaactagtgggatgtgttatagcaaatccatatatat 33105866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 38425820 - 38425899
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||| || |||||||| ||||||||||||||||||  ||||||||| | || | ||||||||| ||||||    
T  38425820 aaaagtagttaaatgcaacttaaggtgtagcttgctaaaacactcccacataaaaactcgtgggtgtgttctagcaaatc 38425899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 54742490 - 54742403
Alignment:
Q  10 aaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||| |||||||| ||| ||||||| ||||||||||||||| ||  ||||||||| |||| | ||||||||| ||||||  |||||||    
T  54742490 aaagtagttaaatgcactttaaggtgtagcttgctaaaacattcccacataaaaactagtgggtgtgttctagcaaatccatatatat 54742403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 578755 - 578697
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| |||||| ||||||||    
T  578755 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctatatat 578697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 10216250 - 10216192
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  ||||||||| |||||||||||||||| ||||||  |||||||    
T  10216250 cttgctaaaacactcccacataaaaactagttgatgtgttctagcaaatccatatatat 10216192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 13211651 - 13211725
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatct 89  Q
    |||||||| ||||||||||| ||||||||||||||||||  |||| |||| ||||   ||||||||| |||||||    
T  13211651 agttaaatgcaccttaaggtgtagcttgctaaaacactcccacatcaaaactagtgagtgtgttctagcaaatct 13211725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 20459163 - 20459229
Alignment:
Q  22 tacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||| |||||| ||||||||||||||||||  ||||||||| |||| | ||| ||||||||||||    
T  20459163 tacaccctaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtattctaacaaatc 20459229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 42808075 - 42808141
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||||||||||||||||| |||| |||||||||||||   |||||||||||||| | |||||||||    
T  42808075 gttaaatacaccttaaggtgtagctttgctaaaacacttccacataaaaattagtgggtgtgttcta 42808141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 51784135 - 51784205
Alignment:
Q  17 ttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||||||||||| |||||| ||||||| ||||  |||||||||||||| | ||||||||| ||||    
T  51784135 ttaaatacaccttaaggtgtagctttgctaaaatactcccacataaaaattagtgggtgtgttctagcaaa 51784205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 3818966 - 3819022
Alignment:
Q  40 ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||  |||||||||||||| | |||||||||||||||| ||||||||    
T  3818966 ttgctaaaacactcccacataaaaattagtgggtgtgttctaacaaatc-ctatatat 3819022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 4505566 - 4505629
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgtt 78  Q
    |||||||||||||  ||||| ||||||||||||||||||  ||||||||| |||| | ||||||    
T  4505566 agttaaatacacccaaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgtt 4505629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 10981465 - 10981536
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||| ||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  10981465 gttaaatacacattaaggtgtagctttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaa 10981536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 30820653 - 30820724
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| |||||||||||||   ||||||||| |||| | ||||||||| ||||    
T  30820653 gttaaatacaccttaaggtgtagctttgctaaaacacttccacataaaaactagtgggtgtgttctagcaaa 30820724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 5046639 - 5046581
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  ||||||||| |||| | ||||||||| ||||||| |||||||    
T  5046639 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctatatatat 5046581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 13621152 - 13621086
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||||||||||||||  |||||||| ||||||||||||  ||||||||| |||| | |||||||||    
T  13621152 gttaaatacaccttaatttttagctttgctaaaacactcccacataaaaactagtgggtgtgttcta 13621086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 41172464 - 41172382
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||| ||||||| |||| |||||||| |||||  ||||||||| |||| | ||||||||| ||||||  |||||||    
T  41172464 gttaaatacactttaaggtgtagctttgctaaagcactcccacataaaaactagtgggtgtgttctagcaaatccatatatat 41172382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 50182229 - 50182147
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||| ||||||||| |||   |||||||||||| | | ||||||||| |||| | ||||||||    
T  50182229 gttaaatacaccttaaggtgtagctttgctaaaatactttcacataaaaattaatgggtgtgttctagcaaacccctatatat 50182147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 5157217 - 5157266
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  ||||||||| |||| ||||||||||| ||||||    
T  5157217 cttgctaaaacactcccacataaaaactagtggatgtgttctagcaaatc 5157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 32012834 - 32012883
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  32012834 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 32012883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 50182392 - 50182441
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  ||||||||| |||| | ||||||||||||||||    
T  50182392 cttgctaaaacactcccacataaaaactagtgggtgtgttctaacaaatc 50182441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 13211866 - 13211798
Alignment:
Q  19 aaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||||||||| |||| |||||||| |||||  ||||||||| |||| | ||||||||| ||||    
T  13211866 aaatacaccttaaggtgtagctttgctaaagcactcccacataaaaactagtgggtgtgttctagcaaa 13211798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 17745202 - 17745133
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| |||||||||||||  | |||||||| |||| | ||||||||| ||||    
T  17745202 gttaaatacaccttaaggtgtagctttgctaaaacact--tccataaaaactagtgggtgtgttctagcaaa 17745133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 40496311 - 40496355
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| ||||||||| |||||||||| |||||| |||||||||||    
T  40496311 aaaagtagttaaatataccttaaggtgtagcttactaaaacactc 40496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 49606067 - 49605983
Alignment:
Q  4 agattaaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||| ||||| |||||||||||| |||| || ||||||| ||||||||||  || |||||| |||| | | ||||||| ||||||    
T  49606067 agataaaaagtagttaaatacactttaaagtgtagcttgttaaaacactcccacctaaaaactagtgggtatgttctagcaaatc 49605983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 3e-22; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 17604963 - 17604882
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| ||||||||||| ||||||||    
T  17604963 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtggatgtgttctagcaaatctc 17604882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 31039718 - 31039806
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| |||| | ||||||||| |||| | ||||||||    
T  31039718 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcctacataaaaactagtgggtgtgttctagcaaacccctatatat 31039806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 36823986 - 36823907
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||| ||||||||| ||||||    
T  36823986 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagttggtgtgttctagcaaatc 36823907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 33837975 - 33838056
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||   ||||||||| ||||||||    
T  33837975 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcctacataaaaactagtgcgtgtgttctagcaaatctc 33838056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 22894910 - 22894990
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatct 89  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  |||||||||||||| | ||| ||||| |||||||    
T  22894910 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaattagtgggtgtattctagcaaatct 22894990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 3800227 - 3800148
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||    
T  3800227 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatc 3800148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 27360029 - 27359940
Alignment:
Q  8 taaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||| ||||||||  |||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  27360029 taaaagtagttaaatgtaccttaaggtatagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatat 27359940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 53581590 - 53581509
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||||    
T  53581590 aaaagtagttaaatacatcttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctc 53581509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 26103782 - 26103864
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||||| | ||||||||||||||||||  | |||||||||||| ||| ||||||| ||||||  |||||||    
T  26103782 agttaaatacaccttaagatgtagcttgctaaaacactcccaaataaaaattagtggatatgttctagcaaatccatatatat 26103864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 48765374 - 48765452
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    ||||| |||||||| ||||||||||| ||||||||||||| ||||| ||||||||| |||| | ||||||||| |||||    
T  48765374 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaatactcacacataaaaactagtgggtgtgttctagcaaat 48765452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 6114810 - 6114739
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||||||||||||| | ||||||||| ||||    
T  6114810 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 6114739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 7848556 - 7848485
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||||||| |||| | ||||||||| ||||    
T  7848556 gttaaatacaccttaaggtgtagctttgctaaaacactcctacataaaaactagtgggtgtgttctagcaaa 7848485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 13349166 - 13349087
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||  |||||||||  ||| | ||||||||| ||||||    
T  13349166 aaaagtagttaaatacaccttaaggtggagcttgctaaaacactcccacataaaaaccagtgggtgtgttctagcaaatc 13349087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 6109330 - 6109412
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||| |||| | ||||||||| |||| | ||||||||    
T  6109330 gttaaatacaccttaaggtgtagcgttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccctatatat 6109412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 1376159 - 1376246
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||||||||| |||| ||||| ||||| ||||||||||||  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  1376159 aaaagtagttaaatatacctgaaggtgtagctagctaaaacactcccacataaaaactagtgggtgtgttctagcaaatc-ctatatat 1376246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 53467512 - 53467600
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| || |||| ||||||||||  ||||||||| |||| | | ||||||| |||| | ||||||||    
T  53467512 aaaagtagttaaatacaccttaaggtataacttgttaaaacactcccacataaaaactagtaggtatgttctagcaaacccctatatat 53467600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 8815361 - 8815290
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  8815361 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 8815290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 21408648 - 21408719
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  21408648 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 21408719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 21727674 - 21727603
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  21727674 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 21727603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 47461723 - 47461652
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  47461723 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 47461652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 11460179 - 11460113
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | |||||||||    
T  11460179 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttcta 11460113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 21727840 - 21727898
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| |||||| ||||||||    
T  21727840 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctatatat 21727898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 26152510 - 26152452
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| |||||| ||||||||    
T  26152510 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctatatat 26152452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 45293131 - 45293205
Alignment:
Q  24 caccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  45293131 caccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatat 45293205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 8814809 - 8814756
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaa 62  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||  |||||||    
T  8814809 aaaagtagttcaatacaccttaaggtgtagcttgctaaaacactcccacataaa 8814756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 27317670 - 27317626
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  27317670 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaacactc 27317626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 4043657 - 4043586
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| ||| || ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  4043657 gttaaatacaccttaaggtgtagatttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 4043586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 6109164 - 6109113
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||||    
T  6109164 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatctc 6109113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 12896666 - 12896595
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||| |||| | | ||||||| ||||    
T  12896666 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtttgttctagcaaa 12896595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 17226340 - 17226411
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||| || | | ||||||||| ||||    
T  17226340 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactaatgggtgtgttctagcaaa 17226411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 26158398 - 26158469
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| ||| || ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  26158398 gttaaatacaccttaaggtgtagatttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 26158469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 27728220 - 27728149
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| ||||||||||||||  |||||| || |||| | ||||||||| ||||    
T  27728220 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataataactagtgggtgtgttctagcaaa 27728149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 2868329 - 2868411
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||| |||||||||||||   ||||||||| |||||| | || |||| ||||||  |||||||    
T  2868329 gttaaatacaccttaaggtgtagctttgctaaaacacttcaacataaaaactagttggtatgatctagcaaatccatatatat 2868411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 6114976 - 6115034
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||  |||||||    
T  6114976 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccatatatat 6115034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 6748650 - 6748592
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  ||||||||| |||| | ||||||||| ||||||| |||||||    
T  6748650 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctatatatat 6748592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 17226202 - 17226144
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||  |||||||    
T  17226202 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccatatatat 17226144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 45059698 - 45059780
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||| ||||||| |||||| ||||||||||||  | ||||||| |||| | ||||||||| |||| | ||||||||    
T  45059698 gttaaatacactttaaggtgtagctttgctaaaacactcccaaataaaaactagtgggtgtgttctagcaaacccctatatat 45059780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 3269233 - 3269184
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  3269233 cttgctaaaacactcccacataaaaattagtaggtgtgttctagcaaatc 3269184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 17065920 - 17065969
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  ||||||||| |||| ||||||||||| ||||||    
T  17065920 cttgctaaaacactcccacataaaaactagtggatgtgttctagcaaatc 17065969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 50913161 - 50913238
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||| ||||||||  |||||||| | ||||||||||||||||||  ||||||||| |||| | |||| |||| ||||    
T  50913161 aaaagtagttaaatgtaccttaagatgtagcttgctaaaacactcccacataaaaactagtaggtgtgctctagcaaa 50913238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 34277649 - 34277697
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    |||||||||||  |||||| ||| ||||||||||| |||||||||||||    
T  34277649 gttaaatacactctaaggtgtagtttgctaaaacattcatacataaaaa 34277697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 51148177 - 51148225
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaa 63  Q
    |||||||||| |||||||| |||||| |||||||||||| |||||||||    
T  51148177 gttaaatacaacttaaggtgtagctttgctaaaacactcctacataaaa 51148225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 52654509 - 52654561
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctct 91  Q
    |||||||||||||||  |||||||||||||| | |||| |||| |||||||||    
T  52654509 cttgctaaaacactcccacataaaaattagtgggtgtgatctagcaaatctct 52654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 29125750 - 29125663
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  |||||||||||||| | ||||||||| |||||| ||||||||    
T  29125750 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc-ctatatat 29125663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 26042981 - 26042902
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  26042981 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 26042902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 35550632 - 35550553
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| ||||||||||| ||||||    
T  35550632 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtggatgtgttctagcaaatc 35550553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 32069177 - 32069264
Alignment:
Q  10 aaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| |||| |||| |||| | |||| |||| |||||| ||||||||    
T  32069177 aaagtagttaaatacaccttaaggtgtagcttgctaaaacactcacacatgaaaactagtgggtgtggtctagcaaatccctatatat 32069264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 23053890 - 23053813
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  23053890 aaaagtagttaaatacaccttaaggtatagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 23053813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 32512195 - 32512268
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||||||||| ||||| || ||||||||||||||||||  ||||||||| |||| ||||||||||||||||||    
T  32512195 agttaaatacatcttaaagtgtagcttgctaaaacactctcacataaaaactagtggatgtgttctaacaaatc 32512268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 2823642 - 2823554
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| |||||||||||||||||   ||||||||| |||| | ||||||||| ||||||  |||||||    
T  2823642 aaaagtagttaaatacaccttaaggtatagcttgctaaaacacttccacataaaaactagtgggtgtgttctagcaaatccatatatat 2823554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 8258362 - 8258274
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | |||||| || ||||||  |||||||    
T  8258362 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttatagcaaatccatatatat 8258274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 26867963 - 26867875
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||||||||||||| |||||| ||||||||||||  ||||  |||||||||||| | ||||||||||| |||||| ||||||||    
T  26867963 aaaagtagttaaatacaccctaaggtgtagcttgctaaattactcccacataaaaattattggatgtgttctagcaaatccctatatat 26867875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 13468341 - 13468262
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||| ||||||||| ||||||||||||| ||||  ||||||||| |||| | ||||||||||||||||    
T  13468341 aaaagtagttaaatactccttaaggtatagcttgctaaaatactcccacataaaaactagtgggtgtgttctaacaaatc 13468262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 3369867 - 3369945
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||  ||||||||| ||||   |||||||||||||||    
T  3369867 aaaagtagttaaatataccttaaggtgtagcttgctaaaacactcccacataaaaactagtatgtgtgttctaacaaat 3369945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 1281918 - 1281845
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||| ||||||| || |||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  1281918 agttaaatacactttaaggtgtaacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 1281845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 17952670 - 17952582
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||||||||||||| |||  | ||||||||||||||||||  ||||||||| |||| ||||||||||| ||||| | |||||||    
T  17952670 aaaagtagttaaatacaccctaaaatgtagcttgctaaaacactcccacataaaaactagtggatgtgttctaccaaatatatatatat 17952582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 30633105 - 30633017
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||| ||||||||||| |||||| |||||||||||  ||||||||| || | | ||||||||| |||||| ||||||||    
T  30633105 aaaagtagttaaatgcaccttaaggtgtagcttactaaaacactctcacataaaaactaatgggtgtgttctagcaaatccctatatat 30633017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 36901243 - 36901331
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||  ||||||||| |||| | |||||| || ||||||  |||||||    
T  36901243 aaaagtagttaaatacaccttaagatgtagcttgctaaaacactcccacataaaaactagtgggtgtgttttagcaaatccatatatat 36901331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 30207323 - 30207402
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||| ||| ||||||| || |||||||||||||||  ||||||||| |||| ||||||||||| ||||||    
T  30207323 aaaagtagttaaatgcacattaaggtgtaacttgctaaaacactcccacataaaaactagtggatgtgttctagcaaatc 30207402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 42556834 - 42556896
Alignment:
Q  25 accttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    |||||||||| |||||||||||||||||| |||||||||| |||| |||||||| || |||||    
T  42556834 accttaaggtgtagcttgctaaaacactcttacataaaaactagtggatgtgttatagcaaat 42556896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29377915 - 29377834
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||||| |||  | ||||||||| ||||||  |||||||    
T  29377915 gttaaatacaccttaaggtgtaacttgctaaaacactcccacataaaaactagggggtgtgttctagcaaatccatatatat 29377834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 184263 - 184307
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  184263 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactc 184307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 26630178 - 26630266
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||| |||| ||||||||||| ||||||||| ||||||||  ||||||||| |||| | |||||||||  |||||| |||||||    
T  26630178 aaaagtagtgaaatgcaccttaaggtgtagcttgctcaaacactcccacataaaaactagtgggtgtgttctagtaaatctatatatat 26630266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 1201825 - 1201880
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||  |||||||||    
T  1201825 aaaagtagttaaatacaccttaaggtgtagcttgttaaaacactcccacataaaaa 1201880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 23161359 - 23161280
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||||  |||| |||| |||| | | ||||||| ||||||    
T  23161359 aaaagtagttaaatacacattaaggtgtagcttgctaaaacactcccacatgaaaactagtgggtatgttctagcaaatc 23161280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 25128027 - 25128082
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||  |||||||||    
T  25128027 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaacactcccacataaaaa 25128082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 25281115 - 25281166
Alignment:
Q  17 ttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaatta 67  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  25281115 ttaaatacaccttaaggtgtagctttgctaaaacactcacacataaaaatta 25281166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 27545916 - 27545995
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||   ||||||||| |||  | ||||||||| ||||||    
T  27545916 aaaagtagttaaatacaccttaaggtgtagattgctaaaacactaccacataaaaactagcgggtgtgttctagcaaatc 27545995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 30578033 - 30578096
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgtt 78  Q
    |||||||||||| |||||| |||||| ||||||||||||  |||||||||||||| ||||||||    
T  30578033 gttaaatacaccataaggtgtagctttgctaaaacactcccacataaaaattagtggatgtgtt 30578096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 32486967 - 32486889
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    ||||| ||||||||||||||||| ||  |||||||||||||||||  || ||||||  ||| | |||||||||||||||    
T  32486967 aaaagtagttaaatacaccttaaagtgcagcttgctaaaacactcccacgtaaaaaccagtgggtgtgttctaacaaat 32486889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 10616453 - 10616502
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    |||||||||||||||||||| ||| ||||||||||||||  |||||||||    
T  10616453 agttaaatacaccttaaggtgtagtttgctaaaacactcccacataaaaa 10616502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 42556498 - 42556578
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||| |||||||| || ||||||||||||| |  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  42556498 gttaaatacatcttaaggtgtatcttgctaaaacac-cccacataaaaactagtgggtgtgttctagcaaatccctatatat 42556578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 5946827 - 5946783
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||    
T  5946827 aaaagtagttaaatacaccttaagatgtagcttgctaaaacactc 5946783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 3154140 - 3154069
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| ||| || ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  3154140 gttaaatacaccttaaggtgtagttttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 3154069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 5642553 - 5642482
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||||||||| || |||||| |||| |||||||  ||||||||| |||| | ||||||||||||||    
T  5642553 gttaaatacaccttaaagtgtagctttgctagaacactcccacataaaaactagtgggtgtgttctaacaaa 5642482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 5644494 - 5644423
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||||||||| || |||||| |||| |||||||  ||||||||| |||| | ||||||||||||||    
T  5644494 gttaaatacaccttaaagtgtagctttgctagaacactcccacataaaaactagtgggtgtgttctaacaaa 5644423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 9483813 - 9483884
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| ||||||||| ||||  ||||||||| |||| | ||||||||| ||||    
T  9483813 gttaaatacaccttaaggtgtagctttgctaaaatactcccacataaaaactagtgggtgtgttctagcaaa 9483884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 19971464 - 19971401
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgtt 78  Q
    |||||||||||| |||||| |||||| ||||||||||||  |||||||||||||| | ||||||    
T  19971464 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaattagtgggtgtgtt 19971401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 21021349 - 21021412
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgtt 78  Q
    |||||||||||| |||||| |||||| ||||||||||||  |||||||||||||| | ||||||    
T  21021349 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaattagtgggtgtgtt 21021412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 21442292 - 21442363
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| ||| || ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  21442292 gttaaatacaccttaaggtgtagatttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 21442363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 9413982 - 9414024
Alignment:
Q  27 cttaaggtttagcttgctaaaacactcatacataaaaattagt 69  Q
    |||||||| |||||||||||||||||| |||||||||| ||||    
T  9413982 cttaaggtgtagcttgctaaaacactcctacataaaaactagt 9414024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 14826324 - 14826270
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagt 69  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||| ||||    
T  14826324 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagt 14826270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 18804945 - 18805023
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    ||||| |||||| ||||||||||||| ||||||||||||| | ||  ||||||||| |||| | |||||| || |||||    
T  18804945 aaaagtagttaagtacaccttaaggtatagcttgctaaaataatcccacataaaaactagtgggtgtgttatagcaaat 18805023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 31071717 - 31071783
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    |||||||||||| |||||| |||||| ||||||||||||  ||||||||| |||| | |||||||||    
T  31071717 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttcta 31071783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 39934435 - 39934354
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||| |||||| || |||| ||||||||||  | ||||||| |||| | ||||||||| |||||| ||||||||    
T  39934435 agttaaatacaccctaaggtgtaacttgataaaacactcccaaataaaaactagtgggtgtgttctagcaaatc-ctatatat 39934354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 3154268 - 3154317
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  3154268 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 3154317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 4018734 - 4018783
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  ||||||||| |||| | ||||||||||||||||    
T  4018734 cttgctaaaacactcccacataaaaactagtgggtgtgttctaacaaatc 4018783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 14819306 - 14819257
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  14819306 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 14819257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 34103162 - 34103235
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||| |||| || ||||||||||||||| ||  |||| |||| |||| | ||||||||| ||||||    
T  34103162 agttaaatacactttaacgtgtagcttgctaaaacaatcccacatgaaaactagtgggtgtgttctagcaaatc 34103235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 35067352 - 35067411
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagt 69  Q
    ||||| ||||||| |||| ||||||| |||||||||||||||||  |||||||||| ||||    
T  35067352 aaaagtagttaaaaacac-ttaaggtgtagcttgctaaaacacttctacataaaaactagt 35067411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 44874174 - 44874130
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| |||||||||||||||||| | ||||||| ||||||||||    
T  44874174 aaaagtagttaaatacaccttaagatgtagcttgttaaaacactc 44874130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 463467 - 463555
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  463467 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatcactatatat 463555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 26843152 - 26843228
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaa 85  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||| |||||| |||||||||||||    
T  26843152 aaaagtagttaaatacaccttaagttgtagcttgctaaaacactcacacataaaaactagttggtgtgttctaacaa 26843228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 13157714 - 13157793
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||    
T  13157714 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtaggtgtgttctagcaaatc 13157793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 50559404 - 50559483
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||| |||||||||| |||| | ||||||||| ||||||    
T  50559404 aaaagtagtgaaatgcaccttaaggtttagcttgctaaaacactcctacataaaaactagtgggtgtgttctagcaaatc 50559483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 16005605 - 16005517
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||| | ||||||| |||||||||  |||||||||| |||| | ||||||||| |||||| ||||||||    
T  16005605 aaaagtagttaaatacaccttaagatgtagcttgttaaaacacttctacataaaaactagtgggtgtgttctagcaaatccctatatat 16005517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 34515285 - 34515364
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | |||||| || ||||||    
T  34515285 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttatagcaaatc 34515364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 27787955 - 27788044
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacat-aaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  |||| ||||| |||| | ||||||||| ||||||  |||||||    
T  27787955 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaaaatagtgggtgtgttctagcaaatccatatatat 27788044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 6192580 - 6192650
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttc 79  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||   ||||||||| |||| |||||||||    
T  6192580 aaaagtagttaaatacaccttaaggtgtagcttgctaaaatactatgacataaaaactagtggatgtgttc 6192650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 32156024 - 32155942
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctct 91  Q
    ||||| ||||||||||| | |||||| ||||||||||||||| ||| ||||||||| || | | ||||||||| |||||||||    
T  32156024 aaaagtagttaaatacatcctaaggtgtagcttgctaaaacattcacacataaaaactaatgggtgtgttctagcaaatctct 32155942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 5491756 - 5491837
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| ||||||||||||| |||||| || ||||||||||||| | || |||||||||||| | |||||| || ||||||||    
T  5491756 aaaagtagttaaatacaccctaaggtgtatcttgctaaaacacacctatataaaaattagtgggtgtgttatagcaaatctc 5491837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 32374562 - 32374482
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| || ||||||||||||||   ||||||||| |||| | ||||||||| |||||| ||||||||    
T  32374562 gttaaatacaccttaaggtgtaacttgctaaaacacttccacataaaaactagtgggtgtgttctagcaaatc-ctatatat 32374482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 32994325 - 32994402
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||| |||||||| || |||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  32994325 aaaagtagttaaatgcatcttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 32994402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 20411359 - 20411430
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  20411359 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 20411430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 28094454 - 28094383
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||||| |||||| |||||| ||||||||||||  |||||||||||||| | ||||||||| ||||    
T  28094454 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 28094383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 13157429 - 13157483
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagt 69  Q
    ||||||||||||| |||||| ||||||||||||||||||  |||||||| |||||    
T  13157429 agttaaatacaccctaaggtgtagcttgctaaaacactcccacataaaagttagt 13157483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 20411193 - 20411135
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| |||||| ||||||||    
T  20411193 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctatatat 20411135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 23413671 - 23413601
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||||||||||||| |  ||||||||| |||| | ||| ||||| ||||    
T  23413671 gttaaatacaccttaaggtgtagcttgctaaaacacccccacataaaaactagtgggtgtcttctagcaaa 23413601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 47131103 - 47131160
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||| ||||||||| |||| | |||||||||||||||| ||||||||    
T  47131103 cttgctaaaacactcacacataaaaactagtgggtgtgttctaacaaatc-ctatatat 47131160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 12010545 - 12010473
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||||||||||||||||| |||| ||||||||| ||||  |||||||||||||| | ||||||||| ||||||    
T  12010545 gttaaatacaccttaaggtgtagctttgctaaaa-actcccacataaaaattagtgggtgtgttctagcaaatc 12010473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 20201886 - 20201935
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  |||||||||||||| | ||||||||||||||||    
T  20201886 cttgctaaaacactcccacataaaaattagtgggtgtgttctaacaaatc 20201935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 51431880 - 51431815
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttct 80  Q
    |||||||| ||||||||||| || |||||||||||||||  ||||||||| |||| | ||||||||    
T  51431880 agttaaatgcaccttaaggtgtaacttgctaaaacactccaacataaaaactagtgggtgtgttct 51431815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 8643037 - 8642949
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||| | ||||||| | ||||||||||||||||||  | ||||||| |||| | ||||||||| ||||||  |||||||    
T  8643037 aaaagtagttaaatgcgccttaagatgtagcttgctaaaacactcccatataaaaactagtgggtgtgttctagcaaatccatatatat 8642949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 13264572 - 13264528
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  13264572 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaacactc 13264528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 24770784 - 24770872
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||| |||| ||||||||| | ||||||||||||||||||  ||||||||| ||||   ||||||||| ||||||  |||||||    
T  24770784 aaaagtagtgaaatgcaccttaagatgtagcttgctaaaacactctcacataaaaactagtgagtgtgttctaccaaatccatatatat 24770872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 41146291 - 41146203
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||| |||| ||||||||||| ||||||||||||||||||  | ||||||| |||| | ||| ||||| ||||||  |||||||    
T  41146291 aaaagtagtgaaatgcaccttaaggtgtagcttgctaaaacactcccatataaaaactagtgggtgttttctagcaaatccttatatat 41146203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 42199894 - 42199850
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  42199894 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaacactc 42199850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 42208762 - 42208718
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  42208762 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaacactc 42208718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 45818822 - 45818735
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||||||| |||||||||| | ||||||||||||||||||  ||||||||| |||| | ||| ||||| ||||||  |||||||    
T  45818822 aaaagaagttaaaaacaccttaag-tgtagcttgctaaaacactccgacataaaaactagtgggtgtattctagcaaatccatatatat 45818735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 12864315 - 12864244
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||| || | | ||||||||| ||||    
T  12864315 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactactgggtgtgttctagcaaa 12864244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 13943424 - 13943495
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| ||| ||||||||||  ||||||||| |||| | ||||||||| ||||    
T  13943424 gttaaatacaccttaaggtgtagctttgttaaaacactcccacataaaaactagtgggtgtgttctagcaaa 13943495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 14387562 - 14387633
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||  ||||| |||| | ||||||||| ||||    
T  14387562 gttaaatacaccttaaggtgtagctttgctaaaacactcacacggaaaaactagtgggtgtgttctagcaaa 14387633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 14494531 - 14494602
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||| |||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  14494531 gttaaataaaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 14494602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 32716429 - 32716358
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||| || | | ||||||||| ||||    
T  32716429 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactaatgggtgtgttctagcaaa 32716358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 34306598 - 34306653
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    ||||| |||||||||||||||||||| |||||| || ||||||||  |||||||||    
T  34306598 aaaagtagttaaatacaccttaaggtgtagcttcctgaaacactccgacataaaaa 34306653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 27255814 - 27255868
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagt 69  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||| ||||    
T  27255814 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagt 27255868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 36817646 - 36817588
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||  |||||||    
T  36817646 cttgctaaaacactctcacataaaaattagtgggtgtgttctagcaaatccatatatat 36817588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 158569 - 158649
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| || ||||||||||||||||| | ||||||||||||||||    |||||||||||| | |||||||||  |||||||    
T  158569 aaaagtagctaaatacaccttaaggtgttgcttgctaaaacactc-cctataaaaattagtgggtgtgttctagaaaatctc 158649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 3979532 - 3979621
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatac-ataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||||||| ||| |||||| | ||| ||||||||||||||  || ||||||| |||| | ||||||||| |||||||| ||||||    
T  3979532 aaaagtagttaaaaacatcttaagatgtagattgctaaaacactcccacaataaaaactagtgggtgtgttctagcaaatctcaatatat 3979621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 14387414 - 14387487
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||| ||||||||||| ||||||||||| ||||||  |||||| || || | | ||||||||| ||||||    
T  14387414 agttaaatgcaccttaaggtgtagcttgctaacacactcccacataagaactaatgggtgtgttctagcaaatc 14387487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 27255648 - 27255599
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  27255648 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 27255599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 28454740 - 28454691
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    ||||||||| | |||||||| ||||||||||||||||||  |||||||||    
T  28454740 agttaaatataacttaaggtgtagcttgctaaaacactcccacataaaaa 28454691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 32379528 - 32379467
Alignment:
Q  27 cttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||| ||||||||||||||||| | || ||||||  ||| ||||| ||||||||||||    
T  32379528 cttaaggtgtagcttgctaaaacacttacacgtaaaaaccagtagatgttttctaacaaatc 32379467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 4158270 - 4158318
Alignment:
Q  17 ttaaatacaccttaaggtttagcttgct-aaaacactcatacataaaaa 64  Q
    |||||||||||||||||| ||||||||| |||||||||  |||||||||    
T  4158270 ttaaatacaccttaaggtgtagcttgctaaaaacactcccacataaaaa 4158318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 5e-21; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 27168407 - 27168486
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| |||| | ||||||||| ||||||    
T  27168407 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcacacataaaaactagtgggtgtgttctagcaaatc 27168486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 6559399 - 6559311
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  |||| |||| |||| | ||||||||| ||||||| |||||||    
T  6559399 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacatcaaaactagtgggtgtgttctagcaaatctatatatat 6559311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 19069432 - 19069360
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| |||| | ||||||||| |||||    
T  19069432 agttaaatacaccttaaggtgtagcttgctaaaacactcttacataaaaactagtgggtgtgttctagcaaat 19069360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 938937 - 938858
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||    
T  938937 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatc 938858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 20516955 - 20516873
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||||||||||||| | |||||||||||||| | ||||||||    
T  20516955 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaattagtgggtgtgttctaacaaacccctatatat 20516873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 2936682 - 2936601
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| |||||||||||||||||||| || |||||||||||||||| ||||||||| || | | ||||||||| ||||||||    
T  2936682 aaaagtagttaaatacaccttaaggtgtaacttgctaaaacactcaaacataaaaactaatgggtgtgttctagcaaatctc 2936601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 25818526 - 25818445
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||||    
T  25818526 aaaagcagttaaatgcaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctc 25818445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 454146 - 454058
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||| ||||||||||| | |||||||||||||||||| |||||||||| |||| | ||||||||| ||||||  |||||||    
T  454146 aaaagtagttaattacaccttaagatgtagcttgctaaaacactcctacataaaaaatagtgggtgtgttctagcaaatccttatatat 454058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 38368010 - 38368098
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| || |||||||||||||||  ||||||||| |||| | ||||||||| ||||||  |||||||    
T  38368010 aaaagtagttaaatacaccttaaggtgtaacttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccatatatat 38368098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 41037400 - 41037312
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||| ||||||||||| ||||||||||||||| ||  ||||||||| |||| ||||||||||| ||||||  |||||||    
T  41037400 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaacattcccacataaaaactagtggatgtgttctagcaaatccatatatat 41037312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 24720296 - 24720230
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| | |||||||||    
T  24720296 gttaaatacaccttaaggtgtagctttgctaaaacactcctacataaaaattagtgggtgtgttcta 24720230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 3512758 - 3512827
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgtt 78  Q
    ||||| ||| |||| ||||||||||| ||||||||||||||||||  |||||||||||||| ||||||||    
T  3512758 aaaagtagtgaaatgcaccttaaggtgtagcttgctaaaacactcccacataaaaattagtggatgtgtt 3512827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 28912124 - 28912064
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagt 69  Q
    ||||| |||||||||||||||||||  |||||||||||||||||| |||||||||| ||||    
T  28912124 aaaagtagttaaatacaccttaaggcgtagcttgctaaaacactcctacataaaaactagt 28912064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 27811984 - 27811906
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||| |||||||||||||||||||| |||| ||||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  27811984 aaaagtagttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 27811906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 33889124 - 33889046
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||| ||||||||||||||||||| |||| ||||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  33889124 aaaaggggttaaatacaccttaaggtgtagctttgctaaaacactccgacataaaaactagtgggtgtgttctagcaaa 33889046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 41407384 - 41407307
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||| ||||||||||||||||| || ||||||||||||||||||  ||||||||| || | | ||||||||| ||||    
T  41407384 aaaagtagttaaatacaccttaatgtgtagcttgctaaaacactcccacataaaaactaataggtgtgttctagcaaa 41407307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 2362794 - 2362739
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    ||||| |||||||||||||||||||| || |||||||||||||||  |||||||||    
T  2362794 aaaagtagttaaatacaccttaaggtataacttgctaaaacactcccacataaaaa 2362739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 2509481 - 2509552
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    |||||||  |||||||||| ||||||||||||||||||  |||| |||| |||| ||||||||||| |||||    
T  2509481 gttaaatgtaccttaaggtgtagcttgctaaaacactcccacatcaaaactagtggatgtgttctagcaaat 2509552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 7437969 - 7438032
Alignment:
Q  24 caccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||| |||||| ||||||||||||  |||||||||| ||| ||||||||||||||||    
T  7437969 caccttaaggtgtagctttgctaaaacactcccacataaaaatgagtggatgtgttctaacaaa 7438032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 18199603 - 18199532
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  18199603 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 18199532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 45225295 - 45225224
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  45225295 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 45225224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 8048131 - 8048197
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    |||||||||||| |||||| |||||| ||||||||||||  |||||||||||||| | |||||||||    
T  8048131 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaattagtgggtgtgttcta 8048197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 11766145 - 11766077
Alignment:
Q  28 ttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||| ||||||||||||||||||  |||||||||||||| | ||||||||| |||||| | ||||||    
T  11766145 ttaaggtgtagcttgctaaaacactcc-acataaaaattagtgggtgtgttctagcaaatccccatatat 11766077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 6736665 - 6736725
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagt 69  Q
    ||||| |||||| ||||||||||||| |||||| |||||||||||  ||||||||| ||||    
T  6736665 aaaagtagttaagtacaccttaaggtgtagcttactaaaacactcccacataaaaactagt 6736725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 18352470 - 18352530
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagt 69  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||||||  ||||||||| ||||    
T  18352470 aaaagtagttaaatgcaccttaaggtgtagcttgttaaaacactcccacataaaaactagt 18352530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 4655080 - 4655009
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||| |||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  4655080 gttaaatacatcttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 4655009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 27597055 - 27596984
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| |||||||||||||   ||||||||| |||| | ||||||||| ||||    
T  27597055 gttaaatacaccttaaggtgtagctttgctaaaacactataacataaaaactagtgggtgtgttctagcaaa 27596984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 15957368 - 15957410
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacac 51  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||    
T  15957368 aaaagtagttaaatacatcttaaggtgtagcttgctaaaacac 15957410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 26380238 - 26380320
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||| |||||||| || ||| ||||||||||||  ||||||||| || | |||||||||||| |||||  |||||||    
T  26380238 gttaaatacaacttaaggtgtaactttgctaaaacactcccacataaaaactaatggatgtgttctaataaatccatatatat 26380320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 45225594 - 45225652
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||  |||||||    
T  45225594 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccatatatat 45225652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 4655250 - 4655299
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  4655250 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 4655299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 18199773 - 18199822
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||||||  ||||||||| |||| | ||||||||||||||||    
T  18199773 cttgctaaaacactcccacataaaaactagtgggtgtgttctaacaaatc 18199822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 34986536 - 34986479
Alignment:
Q  40 ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||  ||||||||| |||| | ||||||||| ||||||| |||||||    
T  34986536 ttgctaaaacactctcacataaaaactagtgggtgtgttctagcaaatctatatatat 34986479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 48454707 - 48454780
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||||| |||| |||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||||    
T  48454707 gttaaatgcaccctaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatc 48454780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 14777962 - 14777898
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttc 79  Q
    |||||| |||||||||||| |||||| ||||||||||||  ||||||||| |||| | |||||||    
T  14777962 gttaaacacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttc 14777898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 15230100 - 15230036
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttc 79  Q
    |||||| |||||||||||| |||||| ||||||||||||  ||||||||| |||| | |||||||    
T  15230100 gttaaacacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttc 15230036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 20517122 - 20517170
Alignment:
Q  40 ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  20517122 ttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 20517170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 12910178 - 12910255
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||||||||    
T  12910178 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctaacaaa 12910255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 39038545 - 39038473
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||| ||||||||| |||||||||| || ||||||||||||||||||||||||||||||| | |||||||||    
T  39038545 aaaagtagttaaataaaccttaaggtgtaacttgctaaaacactcatacataaaaattagtaggtgtgttcta 39038473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 4737958 - 4737881
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  4737958 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 4737881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 6436449 - 6436368
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||||    
T  6436449 aaaagtagttaaatacatcttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctc 6436368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 2528793 - 2528706
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||| ||||||||||| || |||||||||||||||  ||||||||| |||| ||||||||||| |||||| ||||||||    
T  2528793 aaaagtagttaaatgcaccttaaggtataccttgctaaaacactcccacataaaaactagtggatgtgttctagcaaatc-ctatatat 2528706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 13711189 - 13711277
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  |||||||||  ||| | |||||||||  |||||| |||||||    
T  13711189 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactctcacataaaaaccagtgggtgtgttctagtaaatctatatatat 13711277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 31240400 - 31240472
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||  ||||||||| |||| |||||||||||    
T  31240400 aaaagtagttaaatacaccttaagatgtagcttgctaaaacactctcacataaaaactagtggatgtgttcta 31240472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 39548996 - 39549083
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||||||||| |||||||| | |||||||||||||||||| |||||||||| |||  | |||||||||||||| ||||||||||    
T  39548996 aaaagtagttaaatataccttaagatgtagcttgctaaaacactcctacataaaaactaggaggtgtgttctaacaaa-ctctatatat 39549083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 1921482 - 1921417
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||||| |||| | |||||||||    
T  1921482 gttaaatacaccttaaggtgtagcttgctaaaacactcccacataaaaactagtaggtgtgttcta 1921417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 10951081 - 10951000
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| || |||||||| |||||||| ||||||||||||||||||  |||| |||| |||| ||||||||||| ||||||||    
T  10951081 aaaagtagctaaatacatcttaaggtgtagcttgctaaaacactcccacattaaaactagtggatgtgttctaccaaatctc 10951000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 17233078 - 17233147
Alignment:
Q  19 aaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||| |||| | ||||||||| ||||||    
T  17233078 aaatgcaccttaaggtgtagcttgctaaaacactcctacataaaaactagtgggtgtgttctaccaaatc 17233147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 3038913 - 3038825
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||||  ||||||||| |||| | | ||||||| ||||||  |||||||    
T  3038913 aaaagtagttaaatacatcttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtatgttctagcaaatccatatatat 3038825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 25912206 - 25912285
Alignment:
Q  17 ttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||||| || |||||||||||||||  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  25912206 ttaaatacaccttaaggtgtaacttgctaaaacactcccacataaaaactagtaggtgtgttctagcaaatc-ctatatat 25912285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 30688079 - 30688151
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||||| ||||||||| |||||    
T  30688079 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagttggtgtgttctagcaaat 30688151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 40234230 - 40234309
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||| ||||||| ||| ||||||||||||||  ||||||||| |||| | ||||||||| ||||||    
T  40234230 aaaagtagttaaatacactttaaggtgtagtttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatc 40234309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 6261153 - 6261235
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||| ||| ||| | ||||||||||||||||  ||||||||| |||| | ||||||||| ||||||| |||||||    
T  6261153 agttaaatacactttacggtatggcttgctaaaacactctcacataaaaaatagtaggtgtgttctagcaaatctatatatat 6261235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 8410774 - 8410856
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctct 91  Q
    ||||| ||||||| | || ||||||| ||||||||||||||||||  ||||||||| |||| | ||||||| |||||||||||    
T  8410774 aaaagtagttaaacatacattaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttccaacaaatctct 8410856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 15808993 - 15808911
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||| |||||| |||||| ||||||||||||  |||||||||||||| | ||||||||| |||| | ||||||||    
T  15808993 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaacccctatatat 15808911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 30486132 - 30486050
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| |||| | ||||||||    
T  30486132 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccctatatat 30486050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 2695251 - 2695337
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| ||||||||||||| | ||  ||||||||| |||||  |||||  || |||||||||||||||    
T  2695251 aaaagtagttaaatacaccttaaggtgtagcttgctaaaatattcccacataaaaactagtt--tgtgtgttaccaaatctctatatat 2695337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 28747782 - 28747709
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||||||||||| |||||| ||||||||||||||||||  |||||||||  ||| | ||||||||| ||||||    
T  28747782 agttaaatacaccctaaggtgtagcttgctaaaacactctcacataaaaacaagtgggtgtgttctagcaaatc 28747709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 14369793 - 14369749
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  14369793 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactc 14369749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 17421720 - 17421641
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| ||||||||||||| |||||  |||||||||||| |||||  ||||||||| |||| | ||||||||| ||||||    
T  17421720 aaaagtagttaaatacaccataaggcgtagcttgctaaatcactcccacataaaaactagtgggtgtgttctagcaaatc 17421641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 29302269 - 29302340
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  29302269 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 29302340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 33833218 - 33833289
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  33833218 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 33833289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 17605228 - 17605286
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||| |||||||||| |||| | | |||||||||||||| ||||||||    
T  17605228 cttgctaaaacactcctacataaaaactagtaggtatgttctaacaaatccctatatat 17605286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 22701899 - 22701981
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaa-attagttgatgtgttctaacaaatctc 90  Q
    ||||| |||||||| ||||||||||| || |||||||||||||||  |||||||| | |||| | ||||||||| ||||||||    
T  22701899 aaaagtagttaaatgcaccttaaggtgtaacttgctaaaacactcccacataaaacactagtgggtgtgttctagcaaatctc 22701981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 37249490 - 37249548
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| |||||| ||||||||    
T  37249490 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctatatat 37249548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 11448755 - 11448703
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaatta 67  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||||||    
T  11448755 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaatta 11448703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 37468564 - 37468492
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||||| |||| |||||| ||||||||||||||||||  ||||||||| |||| | |||||| || ||||||    
T  37468564 gttaaatgcaccctaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttttagcaaatc 37468492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 38661243 - 38661179
Alignment:
Q  17 ttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttct 80  Q
    |||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||    
T  38661243 ttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttct 38661179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 4083764 - 4083709
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    ||||| ||||||||||||||||| || ||||||| ||||||||||  |||||||||    
T  4083764 aaaagtagttaaatacaccttaaagtgtagcttgttaaaacactcccacataaaaa 4083709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 7014548 - 7014477
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||||| |||||| |||||| ||||||||||||  |||||||||||| | | ||||||||| ||||    
T  7014548 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaattaatgggtgtgttctagcaaa 7014477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 31752466 - 31752391
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||||||  |||||||| | ||| ||||||||||||||  ||||||||| |||| | ||||||||| ||||||||    
T  31752466 agttaaatgtaccttaagatgtagtttgctaaaacactcccacataaaaactagtggttgtgttctagcaaatctc 31752391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 33026250 - 33026179
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    |||||||||||| |||| | ||| || ||||||||||||  |||||||||||||| | ||||||||||||||    
T  33026250 gttaaatacaccctaagatgtagttttgctaaaacactcccacataaaaattagtgggtgtgttctaacaaa 33026179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 4736817 - 4736735
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||| | |||||| ||||||||||||  ||||||||| || | | ||||||||| |||| | ||||||||    
T  4736817 gttaaatacaccttaagatgtagctttgctaaaacactcccacataaaaactaatgggtgtgttctagcaaacccctatatat 4736735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 4736979 - 4737037
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  4736979 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatat 4737037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 17209873 - 17209815
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||| |||||||||| || | ||||||||||| ||||||  |||||||    
T  17209873 cttgctaaaacactcctacataaaaactaatggatgtgttctagcaaatccatatatat 17209815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 17210037 - 17210091
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagt 69  Q
    |||||||||||| |||||| |||||| ||||||||||||  ||||||||||||||    
T  17210037 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaattagt 17210091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 33696079 - 33696037
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacac 51  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||    
T  33696079 aaaagtagttaaatacaccttaaggtgtagcttgttaaaacac 33696037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 857925 - 857856
Alignment:
Q  19 aaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||| ||||||||||| || |||||||||||||||  ||||| ||| |||| | ||||||||| ||||||    
T  857925 aaatgcaccttaaggtgtaacttgctaaaacactcccacatacaaactagtgggtgtgttctagcaaatc 857856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 7944307 - 7944258
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    ||||||||||||||||| || || |||||||||||||||  |||||||||    
T  7944307 agttaaatacaccttaaagtgtaacttgctaaaacactcccacataaaaa 7944258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 7014688 - 7014748
Alignment:
Q  37 agcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||||  ||||||||| ||||   ||||||||| |||||| ||||||||    
T  7014688 agcttgctaaaacactctcacataaaaactagtatgtgtgttctagcaaatccctatatat 7014748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 15809159 - 15809207
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    |||||||||||||||  ||||||||| |||| ||||||||||| |||||    
T  15809159 cttgctaaaacactcccacataaaaactagtggatgtgttctagcaaat 15809207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 17233428 - 17233516
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||| ||||||||| || ||||||||||||||   ||||||||| || | | | | ||||||||||||  |||||||    
T  17233428 aaaagtagttaaatactccttaaggtgtaacttgctaaaacacttccacataaaaactaataggtatattctaacaaatcgttatatat 17233516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 26905920 - 26905868
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaatta 67  Q
    |||||||||||| |||||| |||||| ||||||||||||  ||||||||||||    
T  26905920 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaatta 26905868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 30667580 - 30667528
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctct 91  Q
    |||||||||||||||  ||||||||| || | | |||||||||||||||||||    
T  30667580 cttgctaaaacactcccacataaaaactaatgggtgtgttctaacaaatctct 30667528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 3e-19; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 34082720 - 34082808
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| |||||||||||||||||||| |||||||||||||||||   ||||||||| |||| | ||||||||| |||||| ||||||||    
T  34082720 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactaccacataaaaactagtgggtgtgttctagcaaatccctatatat 34082808  T

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Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 37169709 - 37169797
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||| ||||||||||||| |||||| ||||||| ||| ||||||  |||||||||||||| ||||||||||| |||||| ||||||||    
T  37169709 aaaagtagttaaatacaccctaaggtgtagcttgttaagacactcccacataaaaattagtggatgtgttctagcaaatccctatatat 37169797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 18370385 - 18370466
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| |||||||||||||||||||| || |||||||||||||||  ||||||||| |||| | ||||||||| ||||||||    
T  18370385 aaaagtagttaaatacaccttaaggtgtaacttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctc 18370466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 16513115 - 16513036
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  || |||||| |||| | ||||||||| ||||||    
T  16513115 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcccacgtaaaaactagtgggtgtgttctagcaaatc 16513036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 13002056 - 13001982
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    |||||||||||| |||||| |||| |||||||||||||  |||||||||||||| | ||||||||| ||||||||    
T  13002056 gttaaatacaccctaaggtgtagcatgctaaaacactcccacataaaaattagtcggtgtgttctagcaaatctc 13001982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 39906445 - 39906527
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| |||| ||||||||||    
T  39906445 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacctctatatat 39906527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 33740107 - 33740188
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||| ||||||||  |||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| ||||||||    
T  33740107 aaaagtagttaaatgtaccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatctc 33740188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 23664902 - 23664981
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||| ||||| | ||||||||| ||||||||| |  ||||||||||| |||||||| |||||||||    
T  23664902 aaaagtagttaaatacactttaagatatagcttgctgaaacactcacaagtaaaaattagtggatgtgttataacaaatc 23664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 3769485 - 3769403
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||| |||||||| |||||  ||||||||| |||| | ||||||||| ||||||| |||||||    
T  3769485 gttaaatacaccttaaggtgtagctttgctaaagcactcccacataaaaactagtgggtgtgttctagcaaatctatatatat 3769403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 6332444 - 6332522
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||| ||||||||||||| |||||| |||||| ||||||||||||  |||||||||||||| | ||||||||| ||||    
T  6332444 aaaagtagttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 6332522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 7682179 - 7682245
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| |||||||||||    
T  7682179 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtggatgtgttcta 7682245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 27337119 - 27337049
Alignment:
Q  17 ttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaat 87  Q
    |||||||||||||||||  ||||||||||||||||||  |||||||||  ||| | |||||||||||||||    
T  27337119 ttaaatacaccttaaggcgtagcttgctaaaacactcccacataaaaaccagtgggtgtgttctaacaaat 27337049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 30406636 - 30406718
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||| |||||| |||||| ||||||||||||  |||||||||||||| | ||||||||| |||| | ||||||||    
T  30406636 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaattagtaggtgtgttctagcaaacccctatatat 30406718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 29512109 - 29512044
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||||||||| ||||||| |||||||||||||||||   ||||||||| |||| |||||||||||    
T  29512109 gttaaatacactttaaggtgtagcttgctaaaacacttccacataaaaactagtggatgtgttcta 29512044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 1750230 - 1750151
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||  || |||||| |||| | |||||| || ||||||    
T  1750230 aaaagtagttaaatgcaccttaaggtgtagcttgctaaaacactctcacctaaaaactagtgggtgtgttttagcaaatc 1750151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 22711208 - 22711279
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| | ||||||||||  |||||||||||||| | ||||||||| ||||    
T  22711208 gttaaatacaccttaaggtgtagctttgttaaaacactcccacataaaaattagtgggtgtgttctagcaaa 22711279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 41527900 - 41527821
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| ||||||||||||  |||||| ||| || |||||||||||  |||||||||||||| | ||||||||| ||||||    
T  41527900 aaaagtagttaaatacactctaaggtgtagttttctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 41527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 41927549 - 41927620
Alignment:
Q  26 ccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||| ||||||||||||||||||  ||||||||| |||| | ||||||||| |||| | ||||||||    
T  41927549 ccttaaggtgtagcttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccctatatat 41927620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 44542880 - 44542809
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  44542880 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 44542809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 4293380 - 4293450
Alignment:
Q  17 ttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||| |||| | |||||| |||||||||||| ||||||||||||||| | |||||| |||||||    
T  4293380 ttaaatacaccctaagatgtagctttgctaaaacactcctacataaaaattagtgggtgtgttttaacaaa 4293450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 11675306 - 11675348
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacac 51  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  11675306 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacac 11675348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 17265430 - 17265500
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaa 85  Q
    |||||| |||||||||||||   ||||||||||||||||  ||||||||||| || ||||||||| |||||    
T  17265430 agttaagtacaccttaaggtgatgcttgctaaaacactcccacataaaaattggtggatgtgttccaacaa 17265500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 23234083 - 23234001
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||| | | |||| |||||| ||||||||||||  |||||||||||||| | ||||||||||||||||  |||||||    
T  23234083 gttaaatacatcctgaggtgtagctttgctaaaacactcccacataaaaattagtaggtgtgttctaacaaatccatatatat 23234001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 33173530 - 33173448
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||| ||| || |||||| ||||||||||||  |||||||||||||| |||||||| || ||||||  |||||||    
T  33173530 gttaaatacaccctaatgtgtagctttgctaaaacactcccacataaaaattagtagatgtgttttagcaaatccatatatat 33173448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 45629826 - 45629908
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||| ||||||||||| ||||||||||||| ||||| | |||||||  ||| | ||||||| |||||||| || |||||    
T  45629826 agttaaatgcaccttaaggtgtagcttgctaaaaaactcacatataaaaacaagtgggtgtgttccaacaaatccctttatat 45629908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 2586412 - 2586348
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttc 79  Q
    |||||||||||| |||||| |||||| ||||||||||||  |||||||||||||| | |||||||    
T  2586412 gttaaatacaccctaaggtgtagctttgctaaaacactcccacataaaaattagtgggtgtgttc 2586348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 38986990 - 38986921
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  38986990 gttaaatacaccttaaggtgtagctttgctaaaacactc--acataaaaactagtgggtgtgttctagcaaa 38986921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 9689551 - 9689614
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgtt 78  Q
    ||||||||||||||||||| |||| ||||||||||||||  |||||||||  ||| ||||||||    
T  9689551 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaaccagtggatgtgtt 9689614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 30406471 - 30406420
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    |||||||||||||||  ||||||||| |||| | ||||||||||||||||||    
T  30406471 cttgctaaaacactctcacataaaaactagtgggtgtgttctaacaaatctc 30406420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 33173694 - 33173745
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctc 90  Q
    ||||||| |||||||  |||||||||||||| ||||||||||| ||||||||    
T  33173694 cttgctacaacactcccacataaaaattagtggatgtgttctagcaaatctc 33173745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 42850169 - 42850224
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    ||||| ||||||||||||| ||| || ||||||||||||||||||  |||||||||    
T  42850169 aaaagtagttaaatacaccctaaagtgtagcttgctaaaacactcccacataaaaa 42850224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 16075078 - 16075007
Alignment:
Q  15 agttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    |||||||||||| ||||||| ||||||||||||  |||| |||||||||| || | | ||||||||| ||||||    
T  16075078 agttaaatacacattaaggtgtagcttgctaaa--actcttacataaaaactaatgggtgtgttctagcaaatc 16075007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 20939885 - 20939939
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagt 69  Q
    |||||||||| |||||||| |||||| |||||||||||| |||||||||| ||||    
T  20939885 gttaaatacatcttaaggtgtagctttgctaaaacactcctacataaaaactagt 20939939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 23175402 - 23175344
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  23175402 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatat 23175344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 23586659 - 23586601
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  ||||||||| |||| | ||||||||| |||||| ||||||||    
T  23586659 cttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctatatat 23586601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 39904685 - 39904604
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||| ||||| ||||||||  ||||||||| |||| | ||||||||| | |||| ||||||||    
T  39904685 gttaaatacaccttaaggtgtagctttgct-aaacactcccacataaaaactagtgggtgtgttctagcgaatccctatatat 39904604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 65
Target Start/End: Original strand, 29514295 - 29514324
Alignment:
Q  36 tagcttgctaaaacactcatacataaaaat 65  Q
    ||||||||||||||||||||||||||||||    
T  29514295 tagcttgctaaaacactcatacataaaaat 29514324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 8386853 - 8386925
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||| ||||||||||||| |||| | ||||||| ||||||||||  ||||||||| || | | |||||||||    
T  8386853 aaaagtagttaaatacaccctaagatgtagcttgataaaacactcccacataaaaactaatgggtgtgttcta 8386925  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 15554198 - 15554270
Alignment:
Q  17 ttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||||||||||||| || || ||| ||||||||||||  ||||||||| || | ||||||||||| ||||||    
T  15554198 ttaaatacaccttaaagtgtaactttgctaaaacactcccacataaaaactaatggatgtgttctagcaaatc 15554270  T

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Target: scaffold0217 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 20775 - 20854
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| || |||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  20775 aaaagtagttaaatacaccttaaggtgtatcttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc 20854  T

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Target: scaffold0015 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 9888 - 9966
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| ||| || ||||||||| ||||||    
T  9888 aaaagtagttaaatacaccttaaggtgtagcttgctaaaacactcctacataaaaactag-tggtgtgttctagcaaatc 9966  T

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Target: scaffold0627 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 4101 - 4046
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaa 64  Q
    ||||| |||||||||||||||||||| || ||||||||||||||| ||||||||||    
T  4101 aaaagtagttaaatacaccttaaggtgtaacttgctaaaacactcctacataaaaa 4046  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 452530 - 452612
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| |||| | ||||||||    
T  452530 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaacccctatatat 452612  T

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Target: scaffold0325 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 6572 - 6508
Alignment:
Q  17 ttaaatacaccttaaggtttagcttgctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    |||||||||||||||||| |||||||||||||||||   ||||||||| |||| | |||||||||    
T  6572 ttaaatacaccttaaggtgtagcttgctaaaacacttccacataaaaactagtgggtgtgttcta 6508  T

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Target: scaffold0068 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 57928 - 57857
Alignment:
Q  16 gttaaatacaccttaaggtttagctt-gctaaaacactcatacataaaaattagttgatgtgttctaacaaa 86  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||| |||| | ||||||||| ||||    
T  57928 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 57857  T

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Target: scaffold0068; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 58094 - 58152
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| |||||| ||||||||    
T  58094 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctatatat 58152  T

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Target: scaffold0074 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 26216 - 26282
Alignment:
Q  16 gttaaatacaccttaaggtttagc-ttgctaaaacactcatacataaaaattagttgatgtgttcta 81  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||| |||| | |||||||||    
T  26216 gttaaatacaccttaaggtgtagctttgctaaaacactcccacataaaaactagtgggtgtgttcta 26282  T

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Target: scaffold1808 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 605 - 522
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacact----catacataaaaattagttgatgtgttctaacaaatc 88  Q
    ||||| ||||||| |||||||||||| |||||||||| ||||||    || | | ||||| |||| ||||||||||||||||||    
T  605 aaaagtagttaaaaacaccttaaggtgtagcttgctagaacactcccacaaaaaaaaaaagtagtggatgtgttctaacaaatc 522  T

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Target: scaffold0778 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 6270 - 6213
Alignment:
Q  39 cttgctaaaacactcatacataaaaattagttgatgtgttctaacaaatctctatatat 97  Q
    |||||||||||||||  |||||||||||||| | ||||||||| |||||| ||||||||    
T  6270 cttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatc-ctatatat 6213  T

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Target: scaffold0418 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 5724 - 5680
Alignment:
Q  9 aaaaggagttaaatacaccttaaggtttagcttgctaaaacactc 53  Q
    ||||| ||||||||| |||||||||| |||||| |||||||||||    
T  5724 aaaagtagttaaatataccttaaggtgtagcttactaaaacactc 5680  T

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Target: scaffold0193 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 22779 - 22815
Alignment:
Q  16 gttaaatacaccttaaggtttagcttgctaaaacact 52  Q
    |||||||||||| |||||| |||||||||||||||||    
T  22779 gttaaatacaccctaaggtgtagcttgctaaaacact 22815  T

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