View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6876A_low_435 (Length: 214)
Name: NF6876A_low_435
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6876A_low_435 |
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Alignment Details
Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 39495413 - 39495593
Alignment:
| Q |
21 |
atacgatgactaacataacaacttatgtaattatcagttactaatactattaacactgcagaatagcttacc--aatatactctacacaatgcctgtatt |
118 |
Q |
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| T |
39495413 |
atacgatgactaacataacaacttatgtaattatcagttactaatactattcacactgcataatagcttaccccaatatactctacacaatgcctgtatt |
39495512 |
T |
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| Q |
119 |
cacaaatcataagcactaaaccatgaagttaaattcataaaacattagtagtgtaccatcaccctgctatataatatgcat |
199 |
Q |
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| T |
39495513 |
cacaaatcataagcactaaaccatgaagttaaattcataaaacattagtagtgtaccatcaccctgctatataatatgcat |
39495593 |
T |
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