View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6876A_low_440 (Length: 212)

Name: NF6876A_low_440
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6876A_low_440
NF6876A_low_440
[»] scaffold0407 (2 HSPs)
scaffold0407 (23-104)||(11098-11179)
scaffold0407 (177-212)||(11251-11286)
[»] chr6 (39 HSPs)
chr6 (23-104)||(7828120-7828201)
chr6 (23-104)||(18709651-18709732)
chr6 (23-104)||(18703716-18703797)
chr6 (23-104)||(20410335-20410416)
chr6 (23-104)||(22421173-22421255)
chr6 (23-104)||(2201325-2201407)
chr6 (23-104)||(15890556-15890637)
chr6 (23-104)||(23150093-23150174)
chr6 (23-104)||(32259972-32260052)
chr6 (25-104)||(15999005-15999084)
chr6 (23-104)||(27125303-27125382)
chr6 (23-102)||(31734856-31734935)
chr6 (23-104)||(34964122-34964203)
chr6 (28-99)||(18928813-18928885)
chr6 (168-212)||(19655199-19655243)
chr6 (23-95)||(23431277-23431349)
chr6 (168-212)||(27125445-27125489)
chr6 (169-212)||(7828012-7828055)
chr6 (169-212)||(17318135-17318178)
chr6 (169-212)||(23150256-23150299)
chr6 (23-78)||(25601173-25601228)
chr6 (23-76)||(19654983-19655036)
chr6 (23-104)||(19825331-19825412)
chr6 (23-104)||(23658213-23658294)
chr6 (23-95)||(18454911-18454982)
chr6 (23-78)||(12712295-12712350)
chr6 (169-212)||(20410481-20410524)
chr6 (23-104)||(17317997-17318080)
chr6 (172-208)||(18703612-18703648)
chr6 (172-208)||(18709547-18709583)
chr6 (23-54)||(12208678-12208709)
chr6 (23-78)||(23539966-23540021)
chr6 (26-55)||(18982750-18982779)
chr6 (23-104)||(23993161-23993242)
chr6 (26-55)||(25922177-25922206)
chr6 (27-63)||(16625439-16625475)
chr6 (27-55)||(18820895-18820923)
chr6 (27-55)||(23416063-23416091)
chr6 (27-55)||(27415019-27415047)
[»] chr4 (49 HSPs)
chr4 (23-104)||(25091801-25091882)
chr4 (23-104)||(3485976-3486057)
chr4 (23-104)||(9870288-9870369)
chr4 (23-104)||(12424113-12424194)
chr4 (25-104)||(15115349-15115428)
chr4 (23-104)||(16297065-16297146)
chr4 (23-104)||(33187021-33187102)
chr4 (23-104)||(14549887-14549968)
chr4 (23-104)||(16998673-16998754)
chr4 (23-104)||(19734788-19734869)
chr4 (23-104)||(40230454-40230535)
chr4 (23-104)||(44023441-44023522)
chr4 (23-104)||(15880904-15880986)
chr4 (23-104)||(30139358-30139440)
chr4 (23-104)||(10356260-10356340)
chr4 (23-104)||(10694069-10694150)
chr4 (23-104)||(10907835-10907916)
chr4 (27-104)||(37019797-37019874)
chr4 (23-104)||(42875945-42876026)
chr4 (23-104)||(50161572-50161652)
chr4 (23-104)||(53630296-53630377)
chr4 (27-104)||(9924281-9924359)
chr4 (27-104)||(11478500-11478578)
chr4 (27-104)||(9639158-9639235)
chr4 (23-104)||(14186185-14186266)
chr4 (168-212)||(10694213-10694257)
chr4 (168-212)||(10907979-10908023)
chr4 (169-212)||(12424259-12424302)
chr4 (23-78)||(19610497-19610551)
chr4 (27-78)||(44927988-44928039)
chr4 (23-76)||(35661048-35661100)
chr4 (23-95)||(33243124-33243196)
chr4 (23-104)||(14631262-14631340)
chr4 (169-212)||(25091693-25091736)
chr4 (169-212)||(40230346-40230389)
chr4 (23-78)||(46741351-46741405)
chr4 (23-104)||(19434399-19434484)
chr4 (23-55)||(35811237-35811269)
chr4 (172-212)||(53630446-53630486)
chr4 (27-78)||(15191344-15191395)
chr4 (169-212)||(19022384-19022427)
chr4 (173-212)||(19610364-19610403)
chr4 (169-212)||(33186943-33186986)
chr4 (173-212)||(33243267-33243306)
chr4 (27-55)||(3332853-3332881)
chr4 (23-55)||(13590930-13590962)
chr4 (27-55)||(20156402-20156430)
chr4 (27-55)||(24029774-24029802)
chr4 (27-55)||(43255236-43255264)
[»] chr3 (62 HSPs)
chr3 (23-104)||(10563825-10563906)
chr3 (27-104)||(17541582-17541659)
chr3 (23-104)||(14508995-14509076)
chr3 (23-104)||(15931331-15931412)
chr3 (23-104)||(17325445-17325526)
chr3 (23-104)||(22306405-22306486)
chr3 (23-104)||(35354750-35354831)
chr3 (23-104)||(40808123-40808204)
chr3 (23-104)||(5215769-5215850)
chr3 (23-100)||(11259578-11259655)
chr3 (23-100)||(17045118-17045195)
chr3 (23-100)||(17047278-17047355)
chr3 (23-104)||(17669534-17669615)
chr3 (27-104)||(33565214-33565291)
chr3 (25-104)||(40812977-40813056)
chr3 (23-104)||(11563852-11563933)
chr3 (23-104)||(17684671-17684752)
chr3 (23-104)||(50347477-50347558)
chr3 (23-95)||(15566894-15566966)
chr3 (23-99)||(41172194-41172270)
chr3 (23-102)||(6156838-6156917)
chr3 (23-104)||(2841350-2841431)
chr3 (23-104)||(14520572-14520653)
chr3 (23-104)||(19568053-19568134)
chr3 (27-104)||(35960776-35960853)
chr3 (23-104)||(37039129-37039210)
chr3 (27-104)||(44274545-44274622)
chr3 (28-104)||(5200092-5200168)
chr3 (23-78)||(54875322-54875377)
chr3 (23-95)||(6159555-6159628)
chr3 (27-104)||(45530432-45530508)
chr3 (28-95)||(14152227-14152294)
chr3 (40-103)||(17325372-17325435)
chr3 (169-212)||(22306552-22306595)
chr3 (169-212)||(50347604-50347647)
chr3 (24-78)||(14442328-14442382)
chr3 (26-104)||(17518706-17518783)
chr3 (26-104)||(17533568-17533645)
chr3 (23-104)||(42323816-42323896)
chr3 (23-104)||(46823203-46823284)
chr3 (168-212)||(17045006-17045050)
chr3 (168-212)||(41172339-41172383)
chr3 (169-212)||(11259471-11259514)
chr3 (23-78)||(14641391-14641446)
chr3 (173-212)||(17047166-17047205)
chr3 (169-212)||(17541474-17541517)
chr3 (169-212)||(17694107-17694150)
chr3 (23-78)||(24548807-24548862)
chr3 (169-208)||(35354646-35354685)
chr3 (25-104)||(40957346-40957425)
chr3 (169-208)||(45530572-45530611)
chr3 (173-207)||(17325594-17325628)
chr3 (23-77)||(53645895-53645949)
chr3 (23-56)||(31415613-31415646)
chr3 (173-212)||(6159445-6159484)
chr3 (27-78)||(6468188-6468239)
chr3 (173-212)||(14508887-14508926)
chr3 (173-212)||(17539146-17539185)
chr3 (23-78)||(24547362-24547417)
chr3 (23-56)||(17208689-17208722)
chr3 (27-55)||(11299586-11299614)
chr3 (27-55)||(17626173-17626201)
[»] chr8 (40 HSPs)
chr8 (25-104)||(19140914-19140993)
chr8 (23-104)||(31722337-31722418)
chr8 (23-104)||(39935829-39935910)
chr8 (23-104)||(21579029-21579110)
chr8 (23-104)||(36726894-36726975)
chr8 (25-104)||(20083484-20083563)
chr8 (25-104)||(22258131-22258210)
chr8 (23-104)||(32807459-32807541)
chr8 (23-104)||(21399835-21399916)
chr8 (23-104)||(21794328-21794409)
chr8 (23-104)||(23943648-23943729)
chr8 (23-104)||(29762697-29762778)
chr8 (23-104)||(18761587-18761668)
chr8 (23-104)||(18816140-18816220)
chr8 (23-104)||(20021885-20021965)
chr8 (23-104)||(42817730-42817811)
chr8 (23-104)||(22208394-22208475)
chr8 (23-94)||(5761671-5761742)
chr8 (169-212)||(18761488-18761531)
chr8 (169-212)||(19140804-19140847)
chr8 (169-212)||(21579175-21579218)
chr8 (169-212)||(29762837-29762880)
chr8 (169-212)||(42817876-42817919)
chr8 (23-104)||(16412464-16412545)
chr8 (26-103)||(38989764-38989840)
chr8 (26-103)||(39020861-39020937)
chr8 (27-103)||(6101616-6101691)
chr8 (14-94)||(42265345-42265424)
chr8 (169-212)||(22258275-22258318)
chr8 (169-212)||(23943795-23943838)
chr8 (169-212)||(36306037-36306080)
chr8 (27-78)||(17611142-17611195)
chr8 (175-212)||(39935982-39936019)
chr8 (169-212)||(12037133-12037176)
chr8 (23-78)||(37516744-37516798)
chr8 (27-78)||(39834714-39834765)
chr8 (171-212)||(18834462-18834503)
chr8 (26-55)||(22345341-22345370)
chr8 (26-55)||(22357001-22357030)
chr8 (27-55)||(18620485-18620513)
[»] scaffold0956 (1 HSPs)
scaffold0956 (23-104)||(2687-2768)
[»] scaffold0431 (2 HSPs)
scaffold0431 (23-104)||(5781-5862)
scaffold0431 (169-212)||(5673-5716)
[»] scaffold0026 (1 HSPs)
scaffold0026 (23-104)||(146841-146922)
[»] scaffold0001 (5 HSPs)
scaffold0001 (23-104)||(32142-32223)
scaffold0001 (23-104)||(37449-37530)
scaffold0001 (23-104)||(77835-77916)
scaffold0001 (169-212)||(32034-32077)
scaffold0001 (169-212)||(37341-37384)
[»] chr7 (61 HSPs)
chr7 (23-104)||(708273-708354)
chr7 (23-104)||(11067616-11067697)
chr7 (23-104)||(12465083-12465164)
chr7 (23-104)||(32433412-32433493)
chr7 (23-104)||(8487917-8487998)
chr7 (23-104)||(8513576-8513657)
chr7 (23-104)||(12372422-12372503)
chr7 (23-104)||(15119130-15119211)
chr7 (23-104)||(16999584-16999665)
chr7 (27-104)||(44374968-44375045)
chr7 (27-104)||(44383833-44383910)
chr7 (23-104)||(46385929-46386010)
chr7 (24-104)||(13147294-13147374)
chr7 (25-104)||(12322755-12322834)
chr7 (23-101)||(3287874-3287952)
chr7 (23-104)||(20252037-20252119)
chr7 (23-104)||(14160679-14160760)
chr7 (23-104)||(14180242-14180323)
chr7 (23-104)||(15575487-15575568)
chr7 (23-104)||(19283204-19283285)
chr7 (23-104)||(32160023-32160104)
chr7 (23-104)||(38480436-38480517)
chr7 (23-104)||(18874508-18874590)
chr7 (23-104)||(8850982-8851063)
chr7 (23-104)||(12754436-12754517)
chr7 (23-104)||(16214630-16214711)
chr7 (23-104)||(43276567-43276648)
chr7 (23-95)||(58228-58300)
chr7 (23-78)||(12127011-12127066)
chr7 (23-104)||(18521489-18521573)
chr7 (23-104)||(13698482-13698563)
chr7 (23-104)||(19195752-19195833)
chr7 (23-104)||(47095579-47095659)
chr7 (168-212)||(8851127-8851171)
chr7 (169-212)||(12322899-12322942)
chr7 (169-212)||(12372314-12372357)
chr7 (169-212)||(12465229-12465272)
chr7 (169-212)||(32433558-32433601)
chr7 (169-212)||(43276713-43276756)
chr7 (23-92)||(9743025-9743094)
chr7 (23-104)||(14318206-14318286)
chr7 (169-212)||(11067508-11067551)
chr7 (169-212)||(13147441-13147484)
chr7 (169-212)||(14160825-14160868)
chr7 (173-212)||(16999476-16999515)
chr7 (173-212)||(19283096-19283135)
chr7 (23-104)||(20214274-20214348)
chr7 (23-78)||(20620408-20620463)
chr7 (25-70)||(20586506-20586551)
chr7 (172-212)||(19195651-19195691)
chr7 (23-78)||(14156244-14156299)
chr7 (23-78)||(47974634-47974689)
chr7 (14-56)||(47974545-47974587)
chr7 (23-56)||(18074514-18074547)
chr7 (26-55)||(37539632-37539661)
chr7 (172-212)||(58385-58425)
chr7 (23-55)||(9724663-9724695)
chr7 (27-55)||(15700584-15700612)
chr7 (172-208)||(18074619-18074655)
chr7 (23-55)||(30247331-30247363)
chr7 (27-55)||(39262575-39262603)
[»] chr5 (17 HSPs)
chr5 (23-104)||(36508477-36508558)
chr5 (23-103)||(20566674-20566753)
chr5 (23-95)||(21299874-21299946)
chr5 (28-104)||(24212557-24212633)
chr5 (23-104)||(19921779-19921860)
chr5 (23-104)||(35852813-35852895)
chr5 (23-104)||(18744992-18745072)
chr5 (169-212)||(23199176-23199219)
chr5 (38-104)||(23199045-23199111)
chr5 (169-212)||(21398613-21398656)
chr5 (27-102)||(26762552-26762627)
chr5 (23-76)||(6551143-6551195)
chr5 (27-95)||(8503740-8503807)
chr5 (27-55)||(16063928-16063956)
chr5 (168-212)||(19921684-19921728)
chr5 (23-75)||(19923062-19923114)
chr5 (23-75)||(19925812-19925864)
[»] chr2 (41 HSPs)
chr2 (23-104)||(1383388-1383468)
chr2 (23-104)||(2523570-2523651)
chr2 (23-104)||(24780663-24780744)
chr2 (27-104)||(27852802-27852879)
chr2 (23-104)||(28652396-28652477)
chr2 (26-104)||(31521317-31521395)
chr2 (23-104)||(9976077-9976158)
chr2 (23-104)||(21335094-21335175)
chr2 (23-104)||(22695359-22695439)
chr2 (23-104)||(25142331-25142412)
chr2 (28-104)||(19201045-19201121)
chr2 (28-104)||(23968471-23968547)
chr2 (23-104)||(24516313-24516395)
chr2 (23-104)||(17307612-17307693)
chr2 (23-104)||(21315320-21315401)
chr2 (23-104)||(24436795-24436875)
chr2 (168-212)||(5031097-5031141)
chr2 (23-103)||(27484340-27484420)
chr2 (23-95)||(36841354-36841426)
chr2 (25-104)||(10897005-10897083)
chr2 (23-104)||(20916455-20916537)
chr2 (23-99)||(10743895-10743970)
chr2 (23-78)||(7672119-7672174)
chr2 (169-212)||(24780809-24780852)
chr2 (169-212)||(36841267-36841310)
chr2 (14-104)||(18388042-18388131)
chr2 (168-212)||(21369333-21369377)
chr2 (169-212)||(2523716-2523759)
chr2 (172-211)||(9975970-9976009)
chr2 (169-212)||(24436688-24436731)
chr2 (23-78)||(22251269-22251326)
chr2 (27-78)||(149334-149385)
chr2 (173-212)||(149474-149513)
chr2 (27-78)||(6576762-6576813)
chr2 (169-212)||(14179697-14179740)
chr2 (173-212)||(22251421-22251460)
chr2 (173-212)||(22502011-22502050)
chr2 (173-212)||(22509945-22509984)
chr2 (169-212)||(31521209-31521252)
chr2 (27-78)||(32214080-32214131)
chr2 (23-56)||(24865333-24865366)
[»] chr1 (41 HSPs)
chr1 (23-101)||(41225266-41225344)
chr1 (23-101)||(41226519-41226597)
chr1 (23-104)||(24723207-24723287)
chr1 (23-104)||(46560203-46560284)
chr1 (23-104)||(20588786-20588867)
chr1 (23-104)||(20593324-20593405)
chr1 (23-104)||(42913176-42913257)
chr1 (23-104)||(4595690-4595773)
chr1 (23-100)||(8275844-8275921)
chr1 (23-104)||(20633453-20633534)
chr1 (23-104)||(50545004-50545084)
chr1 (25-104)||(21238904-21238982)
chr1 (23-78)||(46197596-46197651)
chr1 (23-104)||(14237501-14237582)
chr1 (23-104)||(38056519-38056600)
chr1 (23-104)||(8885604-8885691)
chr1 (23-103)||(22350850-22350930)
chr1 (23-95)||(27652242-27652314)
chr1 (169-212)||(19676751-19676794)
chr1 (23-85)||(23967848-23967910)
chr1 (27-104)||(7051771-7051847)
chr1 (171-212)||(21046020-21046061)
chr1 (23-91)||(19676871-19676939)
chr1 (168-212)||(20633599-20633643)
chr1 (169-212)||(20588678-20588721)
chr1 (169-212)||(20593216-20593259)
chr1 (23-78)||(48521549-48521603)
chr1 (26-104)||(21045876-21045953)
chr1 (25-78)||(38886936-38886988)
chr1 (173-212)||(16058287-16058326)
chr1 (27-78)||(20846272-20846323)
chr1 (27-78)||(28193495-28193546)
chr1 (169-212)||(41225423-41225466)
chr1 (169-212)||(41226676-41226719)
chr1 (23-78)||(51274140-51274195)
chr1 (169-207)||(12710912-12710950)
chr1 (26-55)||(22823082-22823111)
chr1 (27-55)||(7320441-7320469)
chr1 (27-55)||(21243605-21243633)
chr1 (27-55)||(39061485-39061513)
chr1 (40-104)||(51083294-51083358)
[»] scaffold0207 (1 HSPs)
scaffold0207 (23-104)||(13245-13326)
[»] scaffold0107 (3 HSPs)
scaffold0107 (23-104)||(13375-13456)
scaffold0107 (173-212)||(13525-13564)
scaffold0107 (27-55)||(14494-14522)
[»] scaffold0051 (1 HSPs)
scaffold0051 (23-104)||(60927-61008)
[»] scaffold0036 (2 HSPs)
scaffold0036 (23-104)||(78008-78089)
scaffold0036 (169-212)||(78154-78197)
[»] scaffold0064 (2 HSPs)
scaffold0064 (23-103)||(58895-58975)
scaffold0064 (169-212)||(58786-58829)
[»] scaffold0019 (2 HSPs)
scaffold0019 (25-104)||(23956-24035)
scaffold0019 (169-212)||(24100-24143)
[»] scaffold0149 (2 HSPs)
scaffold0149 (23-104)||(21738-21819)
scaffold0149 (23-104)||(29416-29498)
[»] scaffold0080 (2 HSPs)
scaffold0080 (23-104)||(58710-58791)
scaffold0080 (169-212)||(21762-21805)
[»] scaffold0074 (1 HSPs)
scaffold0074 (23-104)||(2086-2167)
[»] scaffold0040 (1 HSPs)
scaffold0040 (23-104)||(105895-105976)
[»] scaffold0108 (1 HSPs)
scaffold0108 (23-103)||(6546-6625)
[»] scaffold0113 (1 HSPs)
scaffold0113 (25-104)||(35617-35696)
[»] scaffold1941 (1 HSPs)
scaffold1941 (23-104)||(265-347)
[»] scaffold0061 (2 HSPs)
scaffold0061 (26-104)||(14443-14521)
scaffold0061 (26-104)||(23501-23579)
[»] scaffold1283 (2 HSPs)
scaffold1283 (23-104)||(290-371)
scaffold1283 (172-212)||(440-480)
[»] scaffold0737 (2 HSPs)
scaffold0737 (23-104)||(4537-4617)
scaffold0737 (169-211)||(4683-4725)
[»] scaffold0594 (1 HSPs)
scaffold0594 (23-104)||(2374-2455)
[»] scaffold0555 (1 HSPs)
scaffold0555 (23-104)||(8591-8671)
[»] scaffold0546 (1 HSPs)
scaffold0546 (27-104)||(8058-8135)
[»] scaffold0414 (1 HSPs)
scaffold0414 (23-104)||(10983-11064)
[»] scaffold0231 (2 HSPs)
scaffold0231 (27-104)||(17378-17455)
scaffold0231 (27-78)||(23769-23820)
[»] scaffold0162 (2 HSPs)
scaffold0162 (23-104)||(23715-23796)
scaffold0162 (169-212)||(23861-23904)
[»] scaffold0146 (1 HSPs)
scaffold0146 (23-104)||(23106-23187)
[»] scaffold0111 (2 HSPs)
scaffold0111 (23-104)||(5515-5596)
scaffold0111 (23-76)||(12365-12417)
[»] scaffold0109 (2 HSPs)
scaffold0109 (27-104)||(5172-5249)
scaffold0109 (27-55)||(34931-34959)
[»] scaffold0020 (2 HSPs)
scaffold0020 (23-104)||(174369-174450)
scaffold0020 (26-104)||(143738-143816)
[»] scaffold0004 (4 HSPs)
scaffold0004 (23-104)||(328130-328211)
scaffold0004 (26-55)||(73266-73295)
scaffold0004 (26-55)||(76116-76145)
scaffold0004 (27-55)||(65910-65938)
[»] scaffold0371 (2 HSPs)
scaffold0371 (23-78)||(4036-4091)
scaffold0371 (23-104)||(10269-10350)
[»] scaffold0032 (1 HSPs)
scaffold0032 (23-78)||(61678-61733)
[»] scaffold0098 (1 HSPs)
scaffold0098 (23-104)||(40234-40316)
[»] scaffold0505 (1 HSPs)
scaffold0505 (23-104)||(5063-5142)
[»] scaffold0023 (1 HSPs)
scaffold0023 (23-104)||(16579-16660)
[»] scaffold0676 (1 HSPs)
scaffold0676 (23-95)||(3031-3103)
[»] scaffold0328 (2 HSPs)
scaffold0328 (23-95)||(18471-18543)
scaffold0328 (173-212)||(18613-18652)
[»] scaffold0515 (1 HSPs)
scaffold0515 (23-78)||(5175-5230)
[»] scaffold0507 (1 HSPs)
scaffold0507 (23-78)||(2286-2341)
[»] scaffold0306 (1 HSPs)
scaffold0306 (23-78)||(5175-5230)
[»] scaffold0076 (1 HSPs)
scaffold0076 (23-78)||(22357-22412)
[»] scaffold0116 (1 HSPs)
scaffold0116 (14-94)||(35316-35395)
[»] scaffold1256 (1 HSPs)
scaffold1256 (23-78)||(2033-2088)
[»] scaffold1186 (1 HSPs)
scaffold1186 (23-104)||(2147-2225)
[»] scaffold0121 (1 HSPs)
scaffold0121 (23-78)||(20201-20255)
[»] scaffold0057 (1 HSPs)
scaffold0057 (23-78)||(69704-69759)
[»] scaffold0047 (2 HSPs)
scaffold0047 (169-212)||(79089-79132)
scaffold0047 (32-104)||(79199-79270)
[»] scaffold0005 (1 HSPs)
scaffold0005 (23-104)||(186043-186121)
[»] scaffold0077 (1 HSPs)
scaffold0077 (170-212)||(34379-34421)
[»] scaffold0070 (2 HSPs)
scaffold0070 (26-95)||(11303-11371)
scaffold0070 (173-212)||(11193-11232)
[»] scaffold0853 (2 HSPs)
scaffold0853 (39-104)||(2319-2385)
scaffold0853 (169-212)||(2423-2466)
[»] scaffold0630 (1 HSPs)
scaffold0630 (44-104)||(9190-9250)
[»] scaffold0308 (1 HSPs)
scaffold0308 (14-94)||(13577-13656)
[»] scaffold1992 (1 HSPs)
scaffold1992 (27-78)||(801-852)
[»] scaffold1817 (1 HSPs)
scaffold1817 (23-54)||(743-774)
[»] scaffold0780 (1 HSPs)
scaffold0780 (23-78)||(2341-2395)
[»] scaffold0174 (2 HSPs)
scaffold0174 (169-212)||(5494-5537)
scaffold0174 (26-55)||(5628-5657)
[»] scaffold0125 (1 HSPs)
scaffold0125 (169-208)||(28595-28634)
[»] scaffold1633 (1 HSPs)
scaffold1633 (170-212)||(1245-1287)
[»] scaffold0395 (1 HSPs)
scaffold0395 (23-53)||(12088-12118)
[»] scaffold0007 (1 HSPs)
scaffold0007 (26-55)||(16264-16293)
[»] scaffold1991 (1 HSPs)
scaffold1991 (27-55)||(445-473)
[»] scaffold0385 (1 HSPs)
scaffold0385 (23-55)||(526-558)
[»] scaffold0369 (1 HSPs)
scaffold0369 (27-55)||(15465-15493)
[»] scaffold0334 (1 HSPs)
scaffold0334 (23-78)||(665-721)


Alignment Details
Target: scaffold0407 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 11098 - 11179
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||| ||||||||||||||||||    
T  11098 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacaaggattacgtgaaacctgtttttg 11179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 11251 - 11286
Alignment:
Q  177 ttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11251 ttgtagagtccgatcatctaatttaaggtaagggtg 11286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 7828201 - 7828120
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||| ||||||||||||||||||    
T  7828201 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacaaggattacgtgaaacctgtttttg 7828120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 18709732 - 18709651
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||| ||||||||||||||||||    
T  18709732 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacaaggattacgtgaaacctgtttttg 18709651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 18703797 - 18703716
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||||| |||| ||||||||||||||||||    
T  18703797 agagaaaataagtaggttaatgatttatataaaaggggagagttagaattagaaaacaaggattacgtgaaacctgtttttg 18703716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 20410335 - 20410416
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  20410335 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 20410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 22421255 - 22421173
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaatt-agaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||| | ||||||||||| ||||||||||||||||||    
T  22421255 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattaaaaaaacagggattacgtgaaacctgtttttg 22421173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 2201407 - 2201325
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaatt-agaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||| | |||||| |||| ||||||||||||||||||    
T  2201407 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattaaaaaaacaaggattacgtgaaacctgtttttg 2201325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 15890556 - 15890637
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |  ||| ||||||||| ||||||||    
T  15890556 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataacgattacgtgaaacttgtttttg 15890637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 23150093 - 23150174
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| |||||||||  |||||||    
T  23150093 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacaagtttttg 23150174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 32260052 - 32259972
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||| ||||||||    
T  32260052 agagaaaataagtaggttaaggatttatataaaa-gggagagttagaattagaaaagaaggattacgtgaaacttgtttttg 32259972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 15999084 - 15999005
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||| ||||||| || |||  ||||||||||||| | |||| ||||||||||||||||||    
T  15999084 agaaaataagtaggttaaggatttttataaaaggggagagatagaattagaaaataaggattacgtgaaacctgtttttg 15999005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 27125303 - 27125382
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||||  ||| ||||||||||||||||||    
T  27125303 agagaaaataagtaggttaaagatttatataaaaagg-agagttagaattagaaaaca-agattacgtgaaacctgtttttg 27125382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 31734935 - 31734856
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttt 102  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | ||||  |||||||||| ||||    
T  31734935 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaataaggatttcgtgaaacctatttt 31734856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 34964203 - 34964122
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||||||  | ||| |||||||||||||| | |||| ||||| || ||| |||||    
T  34964203 agagaaaataagtaggttaaggatttatataaaagtggagagttagaattagaaaataaggattacgtgcaaactgcttttg 34964122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 18928885 - 18928813
Alignment:
Q  28 aaataagtaggttaaggatttatat-aaaatggaagatttagaattagaaaacagggatcacgtgaaacctgt 99  Q
    ||||||||||||||||||||||||| |||| || ||| |||||||||||||| | |||| |||||||||||||    
T  18928885 aaataagtaggttaaggatttatataaaaaggggagagttagaattagaaaataaggattacgtgaaacctgt 18928813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 19655199 - 19655243
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  19655199 tgagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 19655243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 23431277 - 23431349
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    ||||||||||||||||||||||| |||||||||| || ||| |||||||||||||| | |||| || ||||||    
T  23431277 agagaaaataagtaggttaaggacttatataaaaggggagagttagaattagaaaataaggattacatgaaac 23431349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 27125445 - 27125489
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  27125445 tgagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 27125489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 7828055 - 7828012
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  7828055 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 7828012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 17318135 - 17318178
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  17318135 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 17318178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 23150256 - 23150299
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  23150256 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 23150299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 25601173 - 25601228
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  25601173 agagagaataattaggttaaggatttatataaaatgggagagttagaattagaaaa 25601228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 19654983 - 19655036
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaa 76  Q
    ||||||||||||||||||||||| |||||||||| || ||| ||||||||||||    
T  19654983 agagaaaataagtaggttaaggacttatataaaaggggagagttagaattagaa 19655036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 19825331 - 19825412
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||| |||||| || || ||| |||||||||||||| | |||| ||||| || ||| |||||    
T  19825331 agagaaaataagtaggttaaggatgtatatataaagggagagttagaattagaaaataaggattacgtgcaaactgcttttg 19825412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 23658294 - 23658213
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||||||    ||| |||||||||||||| | |||| ||||| || ||| |||||    
T  23658294 agagaaaataagtaggttaaggatttatataaaaaaagagagttagaattagaaaataaggattacgtgcaaactgcttttg 23658213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 18454911 - 18454982
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    |||||||||||||||||||||||||||||| ||| || | | |||||||||||||| | |||| |||||||||    
T  18454911 agagaaaataagtaggttaaggatttatat-aaaggggatagttagaattagaaaataaggattacgtgaaac 18454982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 12712350 - 12712295
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||||||| |||||||||| ||||||||||||| || ||| ||||||||||||||    
T  12712350 agagaaaatgagtaggttaaagatttatataaaaggggagagttagaattagaaaa 12712295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 20410481 - 20410524
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  20410481 gagcaatcttgtagagtgcgatcatctaatttaaggtaagggtg 20410524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 17317997 - 17318080
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatgg--aagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| ||   ||| || ||||||||||| |  ||| ||||||||||| ||||||    
T  17317997 agagaaaataagtaggttaatgatttatataaaaggggagagaattggaattagaaaagaaagattacgtgaaacctatttttg 17318080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 18703648 - 18703612
Alignment:
Q  172 caatcttgtagagtccaatcatctaatttaaggtaag 208  Q
    |||||||||||||||| ||||||||||||||||||||    
T  18703648 caatcttgtagagtccgatcatctaatttaaggtaag 18703612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 18709583 - 18709547
Alignment:
Q  172 caatcttgtagagtccaatcatctaatttaaggtaag 208  Q
    |||||||||||||||| ||||||||||||||||||||    
T  18709583 caatcttgtagagtccgatcatctaatttaaggtaag 18709547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 12208709 - 12208678
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataa 54  Q
    ||||||||||||||||||||||||||||||||    
T  12208709 agagaaaataagtaggttaaggatttatataa 12208678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 23540021 - 23539966
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||||||||||||||||||||| |||||| ||| || ||| |||||||| |||||    
T  23540021 agagaaaataagtaggttaaggacttatatgaaaggggagagttagaattggaaaa 23539966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 18982779 - 18982750
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||||||    
T  18982779 gaaaataagtaggttaaggatttatataaa 18982750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 23993242 - 23993161
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||| |||||||||||||| ||||||    ||| |||||||||||||| | |||| ||||| || ||| |||||    
T  23993242 agagaaaataagcaggttaaggatttaaataaaagaagagagttagaattagaaaataaggattacgtgcaaactgcttttg 23993161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 25922206 - 25922177
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||||||    
T  25922206 gaaaataagtaggttaaggatttatataaa 25922177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 16625475 - 16625439
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaaga 63  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  16625475 aaaataagtaggttaaggatttttataaaagggaaga 16625439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 18820895 - 18820923
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  18820895 aaaataagtaggttaaggatttatataaa 18820923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 23416091 - 23416063
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  23416091 aaaataagtaggttaaggatttatataaa 23416063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 27415019 - 27415047
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  27415019 aaaataagtaggttaaggatttatataaa 27415047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 25091882 - 25091801
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||| ||||||||||||||||||    
T  25091882 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacaaggattacgtgaaacctgtttttg 25091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 3486057 - 3485976
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  3486057 agagaaaataagtaggttaaggatttatataaaaagggagagttagaattagaaaataaggattacgtgaaacctgtttttg 3485976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 9870288 - 9870369
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  9870288 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 9870369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 12424113 - 12424194
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| | |||| ||||||||||||||||||    
T  12424113 agagaaaataagtaggttaaggatttatataaaatgggagagttagaataagaaaataaggattacgtgaaacctgtttttg 12424194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 15115428 - 15115349
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  15115428 agaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 15115349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 16297146 - 16297065
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  16297146 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 16297065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 33187102 - 33187021
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | | || ||||||||||||||||||    
T  33187102 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataagaattacgtgaaacctgtttttg 33187021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 14549968 - 14549887
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||| |||||||||||| || ||| ||||||||| |||| | |||| ||||||||||||||||||    
T  14549968 agagaaaataagtaggttaagaatttatataaaaggggagagttagaattataaaataaggattacgtgaaacctgtttttg 14549887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 16998754 - 16998673
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||| |||||||||||||||||||||||||| || ||| |||||||||||||| | |||| |||||| |||||||||||    
T  16998754 agagaaactaagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgagacctgtttttg 16998673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 19734869 - 19734788
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||||||  | ||| |||||||||||||| | |||| |||| |||||||||||||    
T  19734869 agagaaaataagtaggttaaggatttatataaaagaggagagttagaattagaaaataaggattacgtaaaacctgtttttg 19734788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 40230535 - 40230454
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||| |||||||||||| || ||| |||||||||||||| | ||||  |||||||||||||||||    
T  40230535 agagaaaataagtaggttaagaatttatataaaaggggagagttagaattagaaaataaggatttcgtgaaacctgtttttg 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 44023441 - 44023522
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||||||||| |||| | |||| ||||||||||||||||||    
T  44023441 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattaaaaaataaggattacgtgaaacctgtttttg 44023522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 15880986 - 15880904
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaatt-agaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||| |||| || ||| |||||||| | |||||| |||| ||||||||||||||||||    
T  15880986 agagaaaataagtaggttaaggatttatacaaaaggggagagttagaattaaaaaaacaaggattacgtgaaacctgtttttg 15880904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 30139440 - 30139358
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattag-aaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| |  ||| |||||||||| |||| | |||| ||||||||||||||||||    
T  30139440 agagaaaataagtaggttaaggatttatataaaaggagagagttagaattagaaaaataaggattacgtgaaacctgtttttg 30139358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 10356260 - 10356340
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| | ||||||||||||||  ||| ||||||||||| ||||||    
T  10356260 agagaaaataagtaggttaaggatttatataaaagggtagagtaagaattagaaaaca-agattacgtgaaacctatttttg 10356340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 10694069 - 10694150
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||| |||||||  | ||| |||||||||||||| |||||| ||||||||| | ||||||    
T  10694069 agagaaaataagtaggttaaggatttttataaaagaggagagttagaattagaaaagagggattacgtgaaacttatttttg 10694150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 10907835 - 10907916
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||| |||||||  | ||| |||||||||||||| |||||| ||||||||| | ||||||    
T  10907835 agagaaaataagtaggttaaggatttttataaaagaggagagttagaattagaaaagagggattacgtgaaacttatttttg 10907916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 37019874 - 37019797
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| |  |||||||||||||||    
T  37019874 aaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattatatgaaacctgtttttg 37019797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 42876026 - 42875945
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||| |||||||||||||| ||||||||||||| || ||| ||| |||||||||| | |||| ||||||||||||||||||    
T  42876026 agagagaataagtaggttaatgatttatataaaaggggagagttaaaattagaaaataaggattacgtgaaacctgtttttg 42875945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 50161652 - 50161572
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||| |||||||||||||| ||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  50161652 agagaaaataagtagattaaggatttatat-aaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 50161572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 53630296 - 53630377
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||| |||| || |||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  53630296 agagaaaataagtagtttaaagacttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 53630377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 9924359 - 9924281
Alignment:
Q  27 aaaataagtaggttaaggatttatat-aaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||| |||| || ||| |||||||||||||| | |||| ||||||||||| ||||||    
T  9924359 aaaataagtaggttaaggatttatataaaaaggggagagttagaattagaaaataaggattacgtgaaacctatttttg 9924281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 11478500 - 11478578
Alignment:
Q  27 aaaataagtaggttaaggatttatat-aaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||| |||| || ||| |||||||||||||| | |||| ||||||||||| ||||||    
T  11478500 aaaataagtaggttaaggatttatataaaaaggggagagttagaattagaaaataaggattacgtgaaacctatttttg 11478578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 9639235 - 9639158
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||| ||||||||||||| || ||| |||||||||||||| | | ||  |||||||||||||||||    
T  9639235 aaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaataagaatttcgtgaaacctgtttttg 9639158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 14186266 - 14186185
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||| ||||| || ||| |||||||||||||| | ||||  ||||||||| |||||||    
T  14186266 agagaaaataagtaggttaaagatttatgtaaaaagggagagttagaattagaaaagaaggatttcgtgaaacccgtttttg 14186185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 10694213 - 10694257
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  10694213 tgagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 10694257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 10907979 - 10908023
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  10907979 tgagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 10908023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 12424259 - 12424302
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  12424259 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 12424302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 19610551 - 19610497
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  19610551 agagaaaataagtaggttaaggatttatataaaa-gggagagttagaattagaaaa 19610497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 44927988 - 44928039
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  44927988 aaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaa 44928039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 35661100 - 35661048
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaa 76  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  35661100 agagaaaataagtaggttaaggatttatataaaa-gggagagttagaattagaa 35661048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 33243124 - 33243196
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    ||||||||||||||| ||||||| |||||||||| || ||| ||| |||||||||| | |||| |||||||||    
T  33243124 agagaaaataagtagattaaggacttatataaaaggggagagttaaaattagaaaataaggattacgtgaaac 33243196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 14631340 - 14631262
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||| ||||||||||||| |||||||||||| || ||| |||||   |||||| | |||| ||||||||||||||||||    
T  14631340 agagaaattaagtaggttaagaatttatataaaaggggagagttaga---agaaaataaggattacgtgaaacctgtttttg 14631262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 25091736 - 25091693
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  25091736 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 25091693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 40230389 - 40230346
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  40230389 gagcaatcttgtagagttcaatcatctaatctaaggtaagggtg 40230346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 46741405 - 46741351
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||    
T  46741405 agagaaaataagtaggttaaagatttatataaaa-gggagagttagaattagaaaa 46741351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 19434399 - 19434484
Alignment:
Q  23 agagaaaataagtaggttaaggatt------tatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||      |||||||||  | ||| |||||||||||||||  |||| ||||||||||||||||||    
T  19434399 agagaaaataagtaggttaaggatttagatttatataaaagaggagagttagaattagaaaac--ggattacgtgaaacctgtttttg 19434484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 35811237 - 35811269
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||||||    
T  35811237 agagaaaataagtaggttaaggatttatataaa 35811269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 53630446 - 53630486
Alignment:
Q  172 caatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  53630446 caatcttgtagagtctgatcatctaatttaaggtaagggtg 53630486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 15191395 - 15191344
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||| ||||||||||| ||||||| || ||| ||||||||||||||    
T  15191395 aaaataagtatgttaaggatttttataaaaggggagagttagaattagaaaa 15191344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 19022427 - 19022384
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||    
T  19022427 gagcaatcttgtagagtccgatcatctaatctaaggtaaaggtg 19022384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 19610403 - 19610364
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  19610403 aatcttgtagaatccgatcatctaatttaaggtaagggtg 19610364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 33186986 - 33186943
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||    
T  33186986 gagcaattttgtagagtccgatcatctaatttaaggtaggggtg 33186943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 33243267 - 33243306
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  33243267 aatcttgtagagtcccatcatctaatctaaggtaagggtg 33243306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 3332881 - 3332853
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  3332881 aaaataagtaggttaaggatttatataaa 3332853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 13590930 - 13590962
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||| ||||||||||||    
T  13590930 agagaaaataagtaggttaaagatttatataaa 13590962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 20156402 - 20156430
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  20156402 aaaataagtaggttaaggatttatataaa 20156430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 24029802 - 24029774
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  24029802 aaaataagtaggttaaggatttatataaa 24029774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 43255236 - 43255264
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  43255236 aaaataagtaggttaaggatttatataaa 43255264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 10563906 - 10563825
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| | |||| ||||||||||||||||||    
T  10563906 agagaaaataagtaggttaaggatttatataaaatggtagagttagaattagaaaataaggattacgtgaaacctgtttttg 10563825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 17541659 - 17541582
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| ||||||||||||||||||    
T  17541659 aaaataagtaggttaaggatttatataaaagggaagagttagaattagaaaacaaggattacgtgaaacctgtttttg 17541582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 14509076 - 14508995
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  14509076 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 14508995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 15931331 - 15931412
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||| ||| || ||| |||||||||||||||| |||| ||||||||||||||||||    
T  15931331 agagaaaataagtaggttaaggatttatatgaaaggggagagttagaattagaaaacaaggattacgtgaaacctgtttttg 15931412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 17325445 - 17325526
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  17325445 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 17325526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 22306405 - 22306486
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||| |||||||||||| || ||| |||||||||||||||| |||| ||||||||||||||||||    
T  22306405 agagaaaataagtaggttaagaatttatataaaaggggagagttagaattagaaaacaaggattacgtgaaacctgtttttg 22306486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 35354831 - 35354750
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| | |||| ||||||||||||||||||    
T  35354831 agagaaaataagtaggttaaggatttatataaaatgagagagttagaattagaaaataaggattacgtgaaacctgtttttg 35354750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 40808204 - 40808123
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  40808204 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 40808123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 5215850 - 5215769
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  5215850 agagaaaataagtaggttaatgatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 5215769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 11259655 - 11259578
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtt 100  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||  ||| ||||||||||||||    
T  11259655 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacaatgattacgtgaaacctgtt 11259578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 17045195 - 17045118
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtt 100  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||    
T  17045195 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtt 17045118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 17047355 - 17047278
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtt 100  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||    
T  17047355 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtt 17047278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 17669534 - 17669615
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| | ||||||||||||||||    
T  17669534 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattatgtgaaacctgtttttg 17669615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 33565291 - 33565214
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  33565291 aaaataagtaggttaaggatttatataaaaagggagagttagaattagaaaataaggattacgtgaaacctgtttttg 33565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 40813056 - 40812977
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  40813056 agaaaataagtaggttaatgatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 40812977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 11563933 - 11563852
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||| |||| | | || ||||||||||||||||||    
T  11563933 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattataaaataagaattacgtgaaacctgtttttg 11563852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 17684671 - 17684752
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||||||||| |||| | |||| ||||||||||||||||||    
T  17684671 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattaaaaaataaggattacgtgaaacctgtttttg 17684752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 50347477 - 50347558
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||| |||||||||||||||||||||| || ||  |||||||||||||||| ||||  |||||||||||||||||    
T  50347477 agagaaaataattaggttaaggatttatataaaaggggagcgttagaattagaaaacaaggatttcgtgaaacctgtttttg 50347558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 15566966 - 15566894
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||||| | |||| |||||||||    
T  15566966 agagaaaataagtaggttaaggatttatataaaagggaagagttggaattagaaaataaggattacgtgaaac 15566894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 41172194 - 41172270
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgt 99  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| | |||||||||||    
T  41172194 agagaaaataagtaggttaaggatttatataaaaagggagagttagaattagaaaataaggattatgtgaaacctgt 41172270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 6156917 - 6156838
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttt 102  Q
    |||||||||||||||||||| ||||||||||||| || |||| ||||||||||||| | ||||  |||||||||||||||    
T  6156917 agagaaaataagtaggttaaagatttatataaaaggggagatctagaattagaaaagaaggatttcgtgaaacctgtttt 6156838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 2841350 - 2841431
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| | |||| |||||||||||||| | | |||||||| ||||| ||||||    
T  2841350 agagaaaataagtaggttaatgatttatataaaaggaaagagttagaattagaaaataagtatcacgtgtaacctatttttg 2841431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 14520653 - 14520572
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| |||||| |||||| ||||    
T  14520653 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaataaggattacgtgatacctgtgtttg 14520572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 19568053 - 19568134
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||| |||||||||| || ||| |||||||||||||| | |||| |||| ||||||| |||||    
T  19568053 agagaaaataagtaggttaaggaattatataaaaggggagagttagaattagaaaataaggattacgttaaacctgcttttg 19568134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 35960776 - 35960853
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| || |||||||||||||||    
T  35960776 aaaataagtaggttaaagatttatataaaaagggagagttagaattagaaaataaggattacatgaaacctgtttttg 35960853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 37039210 - 37039129
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | ||||| ||| ||||  |||||||    
T  37039210 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggatcgcgtaaaacaagtttttg 37039129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 44274622 - 44274545
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| | ||||||||||||||||    
T  44274622 aaaataagtaggttaatgatttatataaaaggggagagttagaattagaaaataaggattatgtgaaacctgtttttg 44274545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 5200092 - 5200168
Alignment:
Q  28 aaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||| || ||| |||||||| ||||| | | || ||||||||||||||||||    
T  5200092 aaataagtaggttaaggatttatataaaaggggagagttagaatttgaaaataagaattacgtgaaacctgtttttg 5200168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 54875322 - 54875377
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  54875322 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaa 54875377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 6159628 - 6159555
Alignment:
Q  23 agagaaaataagtaggttaaggatttatat-aaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    |||||||||||||||||||||||||||||| |||| || ||| |||||||||||||| | |||| |||||||||    
T  6159628 agagaaaataagtaggttaaggatttatataaaaaggggagagttagaattagaaaataaggattacgtgaaac 6159555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 45530432 - 45530508
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||| ||||||||||||| || ||| |||||||| ||||| | |||| ||||||||||||||||||    
T  45530432 aaaataagtaggttaaagatttatataaaa-gggagagttagaattggaaaataaggattacgtgaaacctgtttttg 45530508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 14152227 - 14152294
Alignment:
Q  28 aaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    ||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| | |||||||    
T  14152227 aaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattatgtgaaac 14152294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 17325372 - 17325435
Alignment:
Q  40 taaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttttt 103  Q
    ||||||||||||||||| || ||| |||||||||||||| | |||| |||||||||||||||||    
T  17325372 taaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgttttt 17325435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 22306552 - 22306595
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  22306552 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 22306595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 50347604 - 50347647
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  50347604 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 50347647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 14442382 - 14442328
Alignment:
Q  24 gagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||    
T  14442382 gagaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaa 14442328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 17518706 - 17518783
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||| || ||| ||| |||||||||| | || | |||||||||||| |||||    
T  17518706 gaaaataagtaggttaaggatttatataaaa-gggagagttataattagaaaataaggtttacgtgaaacctgcttttg 17518783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 17533568 - 17533645
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||| || ||| ||| |||||||||| | || | |||||||||||| |||||    
T  17533568 gaaaataagtaggttaaggatttatataaaa-gggagagttataattagaaaataaggtttacgtgaaacctgcttttg 17533645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 42323816 - 42323896
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||| |||| |||||||||||||  | ||| |||||||||||||| | |||| ||||||||| ||||||||    
T  42323816 agagaaaataagtag-ttaatgatttatataaaaatggagagttagaattagaaaataaggattacgtgaaacttgtttttg 42323896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 46823284 - 46823203
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| |  ||| |||||||||||||| | |||| ||||| || ||| |||||    
T  46823284 agagaaaataagtaggttaatgatttatataaaaggagagagttagaattagaaaataaggattacgtgcaaactgcttttg 46823203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 17045050 - 17045006
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  17045050 tgagtaatcttgtagagtccgatcatctaatttaaggtaagggtg 17045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 41172339 - 41172383
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  41172339 tgagcaatcttgtagagtctgatcatctaatttaaggtaagggtg 41172383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 11259514 - 11259471
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  11259514 gagcaatcttgtagagtccgattatctaatttaaggtaagggtg 11259471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 14641391 - 14641446
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||||||||||||||||||||||||||||||||  | ||| ||||||||| ||||    
T  14641391 agagaaaataagtaggttaaggatttatataaaaatggagagttagaattaaaaaa 14641446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 17047205 - 17047166
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  17047205 aatcttgtagagtccgatcatctaatttaaggtaagggtg 17047166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 17541517 - 17541474
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  17541517 gagcaatcttgtagagtctgatcatctaatttaaggtaagggtg 17541474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 17694150 - 17694107
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    
T  17694150 gagcaatcttgtagagtccgatcatctaatttaatgtaagggtg 17694107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 24548807 - 24548862
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||||||| || ||  ||||||||| ||||    
T  24548807 agagaaaataagtaggttaaggatttatataaaaggggagtgttagaattaaaaaa 24548862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 35354685 - 35354646
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaag 208  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  35354685 gagcaatcttgtagagtccaatcatctaatttaagctaag 35354646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 40957425 - 40957346
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||| ||||||||||||| |  ||| |||||||||||||| | |||| || ||||||  |||||||    
T  40957425 agaaaataagtaggttaaagatttatataaaaagagagagttagaattagaaaataaggattacttgaaacaagtttttg 40957346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 45530572 - 45530611
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaag 208  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  45530572 gagcaatcttgtagagtccgatcatctaatttaaggtaag 45530611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 17325594 - 17325628
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaa 207  Q
    |||||||||||||||||||||||||||||||||||    
T  17325594 aatcttgtagagtccaatcatctaatttaaggtaa 17325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 53645895 - 53645949
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaa 77  Q
    |||||||||||||||| ||||||||||||||||| ||  || |||||||||||||    
T  53645895 agagaaaataagtaggataaggatttatataaaaggggggagttagaattagaaa 53645949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 31415646 - 31415613
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaa 56  Q
    ||||||||||||||||||||||||||||||||||    
T  31415646 agagaaaataagtaggttaaggatttatataaaa 31415613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 6159484 - 6159445
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  6159484 aatcttgtagagtccgatcatctaatctaaggtaagggtg 6159445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 6468188 - 6468239
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||||| |||||||||||||| ||||||| |||| | ||||||||||||||    
T  6468188 aaaataactaggttaaggatttttataaaagggaaaagttagaattagaaaa 6468239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 14508926 - 14508887
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  14508926 aatcttgtagagtccgatcatctaatttatggtaagggtg 14508887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 17539185 - 17539146
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  17539185 aatcttgtagaatccgatcatctaatttaaggtaagggtg 17539146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 24547417 - 24547362
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||| |||||| |||||| || | | ||||||||||||||    
T  24547417 agagaaaataagtaggttaaagatttaaataaaaggggacagttagaattagaaaa 24547362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 17208722 - 17208689
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaa 56  Q
    |||||||||||||||| |||||||||||||||||    
T  17208722 agagaaaataagtagggtaaggatttatataaaa 17208689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 11299586 - 11299614
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  11299586 aaaataagtaggttaaggatttatataaa 11299614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 17626201 - 17626173
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  17626201 aaaataagtaggttaaggatttatataaa 17626173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 9e-26; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 19140993 - 19140914
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||| ||||||||||||||||||    
T  19140993 agaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacaaggattacgtgaaacctgtttttg 19140914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 31722337 - 31722418
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  31722337 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 31722418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 39935829 - 39935910
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  39935829 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 39935910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 21579029 - 21579110
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| | ||||||||||||||||    
T  21579029 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattaggtgaaacctgtttttg 21579110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 36726894 - 36726975
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  36726894 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 36726975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 20083484 - 20083563
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| |||| |||||||||||||    
T  20083484 agaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtaaaacctgtttttg 20083563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 22258131 - 22258210
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||| ||||| |||||||||| ||| |||||||||||||| | |||| ||||||||||||||||||    
T  22258131 agaaaataagtaggttaaagatttctataaaatgggagagttagaattagaaaataaggattacgtgaaacctgtttttg 22258210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 32807541 - 32807459
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaatt-agaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||| | |||||| |||| ||||||||||||||||||    
T  32807541 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattaaaaaaacaaggattacgtgaaacctgtttttg 32807459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 21399916 - 21399835
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||| ||||| || ||| |||||||||||| | | |||| ||||||||||||||||||    
T  21399916 agagaaaataagtaggttaaggatttatttaaaaggggagagttagaattagaacataaggattacgtgaaacctgtttttg 21399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 21794409 - 21794328
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||| ||||| || ||| |||||||||||| | | |||| ||||||||||||||||||    
T  21794409 agagaaaataagtaggttaaggatttatttaaaaggggagagttagaattagaacataaggattacgtgaaacctgtttttg 21794328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 23943648 - 23943729
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||| |||||||||| || ||| |||||||||||||| |  ||| ||||||||||||||||||    
T  23943648 agagaaaataagtaggttaaggacttatataaaaggggagagttagaattagaaaataaagattacgtgaaacctgtttttg 23943729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 29762697 - 29762778
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| | ||||||||||||||||    
T  29762697 agagaaaataagtaggttaatgatttatataaaaggggagagttagaattagaaaataaggattatgtgaaacctgtttttg 29762778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 18761668 - 18761587
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||| |||  | ||| |||||||||||||||| |||| ||||||||||||| ||||    
T  18761668 agagaaaataagtaggttaatgatttatatgaaagtgcagagttagaattagaaaacaaggattacgtgaaacctgtgtttg 18761587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 18816140 - 18816220
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||| |||||||| | |||| ||||||||||| ||||||    
T  18816140 agagaaaataagtaggttaaggatttatataaaacgg-agagttagatttagaaaataaggattacgtgaaacctatttttg 18816220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 20021885 - 20021965
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| |  ||| |||||||||||||| | |||| ||||||||| ||||||||    
T  20021885 agagaaaataagtaggttaaggatttatataaaa-gagagagttagaattagaaaataaggattacgtgaaacatgtttttg 20021965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 42817730 - 42817811
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||| |||| ||||||||||||| || ||| |||||||||||||| | |||| |||||||||||| |||||    
T  42817730 agagaaaataagtagattaaagatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgattttg 42817811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 22208475 - 22208394
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| ||||| || ||| |||||    
T  22208475 agagaaaataagtaggttaaagatttatataaaaagggagagttagaattagaaaataaggattacgtgcaaactgcttttg 22208394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 5761742 - 5761671
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaa 94  Q
    |||||||||||||||||||| ||||||||||||| ||  || |||||||||||||| | |||| ||||||||    
T  5761742 agagaaaataagtaggttaaagatttatataaaagggttgagttagaattagaaaataaggattacgtgaaa 5761671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 18761531 - 18761488
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  18761531 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 18761488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 19140847 - 19140804
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  19140847 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 19140804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 21579175 - 21579218
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  21579175 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 21579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 29762837 - 29762880
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  29762837 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 29762880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 42817876 - 42817919
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  42817876 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 42817919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 16412464 - 16412545
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||| |||||||||| | |||| ||||| || ||| |||||    
T  16412464 agagaaaataagtaggttaaagatttatataaaaagggagagttataattagaaaataaggattacgtgcaaactgcttttg 16412545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 38989840 - 38989764
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttttt 103  Q
    ||||||||||||||||| ||||||||| ||| || ||| |||||||||||||| | |||| |||||||||||| ||||    
T  38989840 gaaaataagtaggttaatgatttatat-aaaggggagagttagaattagaaaataaggattacgtgaaacctgatttt 38989764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 39020937 - 39020861
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttttt 103  Q
    ||||||||||||||||| ||||||||| ||| || ||| |||||||||||||| | |||| |||||||||||| ||||    
T  39020937 gaaaataagtaggttaatgatttatat-aaaggggagagttagaattagaaaataaggattacgtgaaacctgatttt 39020861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 6101616 - 6101691
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttttt 103  Q
    |||||||||||||||| ||||||||||||| || ||| || |||||||||||||  ||| |||||||||||| ||||    
T  6101616 aaaataagtaggttaaagatttatataaaaggggagagttggaattagaaaaca-agattacgtgaaacctgctttt 6101691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 42265345 - 42265424
Alignment:
Q  14 atggacatcagagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaa 94  Q
    ||||| || ||||||||||| ||||||||| |||||||||||| || ||| |||||||||||||| | |||| ||||||||    
T  42265345 atggaaataagagaaaataaataggttaagaatttatataaaaagg-agagttagaattagaaaataaggattacgtgaaa 42265424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 22258275 - 22258318
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  22258275 gagcaatcttgtagtgtccgatcatctaatttaaggtaagggtg 22258318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 23943795 - 23943838
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  23943795 gagcaatcttgtagagtccggtcatctaatttaaggtaagggtg 23943838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 36306080 - 36306037
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| |||||||||| |||||||||||||    
T  36306080 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtg 36306037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 17611142 - 17611195
Alignment:
Q  27 aaaataagtaggttaaggattt--atataaaatggaagatttagaattagaaaa 78  Q
    ||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||    
T  17611142 aaaataagtaggttaaggatttttatataaaatgggagagttagaattagaaaa 17611195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 39935982 - 39936019
Alignment:
Q  175 tcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  39935982 tcttgtagagtccgatcatctaatttaaggtaagggtg 39936019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 12037133 - 12037176
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||    
T  12037133 gagcaatctcgtagagtccgatcatctaatataaggtaagggtg 12037176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 37516798 - 37516744
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||| ||||||||| ||| || ||| ||||||||||||||    
T  37516798 agagaaaataagtaggttaaagatttatat-aaaggggagagttagaattagaaaa 37516744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 39834765 - 39834714
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||| ||||||| || | | ||||||||||||||    
T  39834765 aaaataagtaggttaaggatttttataaaaggggatagttagaattagaaaa 39834714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 18834503 - 18834462
Alignment:
Q  171 gcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||| | || ||||||||||||||||||||||||    
T  18834503 gcaatcttgtagtgcccgatcatctaatttaaggtaagggtg 18834462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 22345370 - 22345341
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||||||    
T  22345370 gaaaataagtaggttaaggatttatataaa 22345341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 22357030 - 22357001
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||||||    
T  22357030 gaaaataagtaggttaaggatttatataaa 22357001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 18620513 - 18620485
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  18620513 aaaataagtaggttaaggatttatataaa 18620485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 2768 - 2687
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||| ||||||| |||| ||||||||||||||||||    
T  2768 agagaaaataagtaggttaaggatttatataaaaggggagagttagaatttgaaaacaaggattacgtgaaacctgtttttg 2687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 5862 - 5781
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| | |||| ||||||||||||||||||    
T  5862 agagaaaataagtaggttaaggatttatataaaatgggagagttagaataagaaaataaggattacgtgaaacctgtttttg 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 5716 - 5673
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  5716 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 5673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 146922 - 146841
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  146922 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 146841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 1e-24; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 32223 - 32142
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| | || ||||||||||||||||||    
T  32223 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacaagaattacgtgaaacctgtttttg 32142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 37530 - 37449
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| | || ||||||||||||||||||    
T  37530 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacaagaattacgtgaaacctgtttttg 37449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 77916 - 77835
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || | | |||||||||||||| | |||| |||||||||||| |||||    
T  77916 agagaaaataagtaggttaaggatttatataaaaggggaaagttagaattagaaaataaggattacgtgaaacctgattttg 77835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 32077 - 32034
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  32077 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 32034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 37384 - 37341
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  37384 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 37341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 708273 - 708354
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  708273 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaagaaggattacgtgaaacctgtttttg 708354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 11067697 - 11067616
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||| || |||||||||||||||    
T  11067697 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacaaggattacctgaaacctgtttttg 11067616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 12465083 - 12465164
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  12465083 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 12465164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 32433412 - 32433493
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||| |||||||||||| |||||    
T  32433412 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacaaggattacgtgaaacctggttttg 32433493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 8487917 - 8487998
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||| ||||||    
T  8487917 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctatttttg 8487998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 8513576 - 8513657
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||| ||||||    
T  8513576 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctatttttg 8513657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 12372503 - 12372422
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||| ||||||||||||||||||||||| || ||| ||| |||||||||||| |||| ||||||||||||||||||    
T  12372503 agagaaaatatgtaggttaaggatttatataaaaggggagagttataattagaaaacaaggattacgtgaaacctgtttttg 12372422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 15119130 - 15119211
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| | ||||  |||||||||| ||||||    
T  15119130 agagaaaataagtaggttaaggatttatataaaatgggagagttagaattagaaaataaggatttcgtgaaacctatttttg 15119211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 16999665 - 16999584
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||| ||||||||||    
T  16999665 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaagcctgtttttg 16999584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 44375045 - 44374968
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  44375045 aaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 44374968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 44383910 - 44383833
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  44383910 aaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 44383833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 46385929 - 46386010
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | ||||  |||||||||||||||||    
T  46385929 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggatttcgtgaaacctgtttttg 46386010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 13147294 - 13147374
Alignment:
Q  24 gagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||||||||||||||| |||| ||||||||| ||||||||    
T  13147294 gagaaaataagtaagttaaggatttatataaaaggggagagttagaattagaaaacaaggattacgtgaaacatgtttttg 13147374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 12322755 - 12322834
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||| ||||||||||||| || ||| |||||||||||||||| ||||  |||||||||||||||||    
T  12322755 agaaaataagtaggttaatgatttatataaaaggggagagttagaattagaaaacaaggatttcgtgaaacctgtttttg 12322834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 3287952 - 3287874
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttt 101  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||| |||||    
T  3287952 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacttgttt 3287874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 20252037 - 20252119
Alignment:
Q  23 agagaaaataagtaggttaaggatttatat-aaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||| |||||| ||||||||||| ||||||    
T  20252037 agagaaaataagtaggttaaggatttatataaaaatgggagagttaaaattagaaaatagggattacgtgaaacctatttttg 20252119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 14160679 - 14160760
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| || ||||||||||| | | || ||||||||||||||||||    
T  14160679 agagaaaataagtaggttaaggatttatataaaaggggagagttggaattagaaaatatgaattacgtgaaacctgtttttg 14160760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 14180242 - 14180323
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||| |||||| || ||| ||||||||| |||| | |||| ||||||||||||||||||    
T  14180242 agagaaaataagtaggttaaggatttagataaaaggggagagttagaattaaaaaataaggattacgtgaaacctgtttttg 14180323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 15575487 - 15575568
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||| ||||||| || ||| |||||||||||||| | ||||  |||||||||||||||||    
T  15575487 agagaaaataagtaggttaaggatttttataaaaggggagagttagaattagaaaataaggatttcgtgaaacctgtttttg 15575568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 19283285 - 19283204
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| | || | |||||||||||||| | |||| ||||||||||| ||||||    
T  19283285 agagaaaataagtaggttaaggatttatataaaaggaaaaagttagaattagaaaataaggattacgtgaaacctatttttg 19283204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 32160023 - 32160104
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||| |||||| || ||| |||||||||||||| | |||| ||||||||||| ||||||    
T  32160023 agagaaaataagtaggttaaggatttacataaaaggggagagttagaattagaaaataaggattacgtgaaacctatttttg 32160104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 38480517 - 38480436
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| |||||||| |||| ||| || ||||||||| |||||| |||| ||||||||||||||||||    
T  38480517 agagaaaataagtaggttaaagatttataaaaaagggaggagttagaattaaaaaacaaggattacgtgaaacctgtttttg 38480436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 18874508 - 18874590
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatg-gaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| | | ||| |||||||||||||| | |||| | ||||||||||||||||    
T  18874508 agagaaaataagtaggttaaggatttatataaaaagaggagagttagaattagaaaataaggattatgtgaaacctgtttttg 18874590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 8850982 - 8851063
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || | | |||||||||||||| | |||| ||||||||||| ||||||    
T  8850982 agagaaaataagtaggttaaagatttatataaaaggggatagttagaattagaaaataaggattacgtgaaacctatttttg 8851063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 12754436 - 12754517
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||| ||||| || ||| |||||||||||||| | |||| || |||||||||||||||    
T  12754436 agagaaaataagtaggttaaagatttatttaaaaggggagagttagaattagaaaataaggattacatgaaacctgtttttg 12754517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 16214711 - 16214630
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||| || ||| |||||    
T  16214711 agagaaaataagtaggttaaggatttatataaaaagggagagttagaattagaaaataaggattacgtgcaaactgcttttg 16214630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 43276567 - 43276648
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||  ||||||| ||||||| ||| |||||||||||||| | |||| |||||||||||| |||||    
T  43276567 agagaaaataagtaggttaattatttatacaaaatgggagagttagaattagaaaataaggattacgtgaaacctgcttttg 43276648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 58228 - 58300
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| |||||||||    
T  58228 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaataaggattacgtgaaac 58300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 12127011 - 12127066
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  12127011 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaa 12127066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 18521573 - 18521489
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaatt---agaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||| |||||||||||| || ||| ||||||||   | |||||| |||| ||||||||||||||||||    
T  18521573 agagaaaataagtaggttaagaatttatataaaaggggagagttagaattaaaaaaaaacaaggattacgtgaaacctgtttttg 18521489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 13698482 - 13698563
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| | ||||||||||| |  ||| |||||||||||||| | |||| || |||||||||||||||    
T  13698482 agagaaaataagtaggttaatggtttatataaaaggtgagagttagaattagaaaataaggattacatgaaacctgtttttg 13698563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 19195833 - 19195752
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||| ||||||| || || ||| |||||||||||||| | |||| |||||||| | |||||||    
T  19195833 agagaaaataagtaggttaaggacttatatacaaggggagagttagaattagaaaataaggattacgtgaaaacagtttttg 19195752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 47095659 - 47095579
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||| |||||||  ||||||||||||| ||| || |||||||||||||| | |||| ||||||||||||||||||    
T  47095659 agagaaaataaataggttagtgatttatataaaaggga-gagttagaattagaaaataaggattacgtgaaacctgtttttg 47095579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 8851127 - 8851171
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  8851127 tgagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 8851171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 12322899 - 12322942
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  12322899 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 12322942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 12372357 - 12372314
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  12372357 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 12372314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 12465229 - 12465272
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  12465229 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 12465272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 32433558 - 32433601
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  32433558 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 32433601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 43276713 - 43276756
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  43276713 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 43276756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 9743025 - 9743094
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtga 92  Q
    ||||||||||| |||||||||||||||||||||  |||||| ||||||||| |||| | |||| ||||||    
T  9743025 agagaaaataaataggttaaggatttatataaatgggaagagttagaattataaaataaggattacgtga 9743094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 14318286 - 14318206
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||| |||||||| ||| || ||| ||||||||||||||   |||| |||||||||||| |||||    
T  14318286 agagaaaataagtaggttaagaatttatat-aaaggggagagttagaattagaaaatgaggattacgtgaaacctgcttttg 14318206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 11067551 - 11067508
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  11067551 gagcaatcttatagagtccgatcatctaatttaaggtaagggtg 11067508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 13147441 - 13147484
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||    
T  13147441 gagcaatcttgtagagtccgatcatctaaattaaggtaagggtg 13147484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 14160825 - 14160868
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  14160825 gagcaatcttgtagagtccgatcatctaatttaagataagggtg 14160868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 16999515 - 16999476
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  16999515 aatcttgtagagtccgatcatctaatttaaggtaagggtg 16999476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 19283135 - 19283096
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  19283135 aatcttgtagagtccgatcatctaatttaaggtaagggtg 19283096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 20214348 - 20214274
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| ||       |||||||||||| | |||| ||||||||||||||||||    
T  20214348 agagaaaataagtaggttaatgatttatataaaaggg-------agaattagaaaataaggattacgtgaaacctgtttttg 20214274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 20620463 - 20620408
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||| ||||||||||||||||||||| || ||| ||||||||| ||||    
T  20620463 agagaaaataagaaggttaaggatttatataaaaggggagagttagaattaaaaaa 20620408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 20586551 - 20586506
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaa 70  Q
    |||||||||||||||||||||||||||||||| || ||| ||||||    
T  20586551 agaaaataagtaggttaaggatttatataaaaggggagaattagaa 20586506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 19195691 - 19195651
Alignment:
Q  172 caatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  19195691 caatcttgtagagtccgatcatctaatctaaggtaagggtg 19195651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 14156244 - 14156299
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||||||||||| |||||||||||||||||||| |  ||  ||||||||||||||    
T  14156244 agagaaaataagttggttaaggatttatataaaaagagagggttagaattagaaaa 14156299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 47974634 - 47974689
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||| ||||||| ||||| || ||| ||||||||| ||||    
T  47974634 agagaaaataagtaggttaaagatttatttaaaaggggagagttagaattaaaaaa 47974689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 47974545 - 47974587
Alignment:
Q  14 atggacatcagagaaaataagtaggttaaggatttatataaaa 56  Q
    ||||| || |||||||||||||||||||| |||||||||||||    
T  47974545 atggaaataagagaaaataagtaggttaatgatttatataaaa 47974587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 18074514 - 18074547
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaa 56  Q
    |||||||||||||||||||| |||||||||||||    
T  18074514 agagaaaataagtaggttaatgatttatataaaa 18074547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 37539661 - 37539632
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||||||    
T  37539661 gaaaataagtaggttaaggatttatataaa 37539632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 58385 - 58425
Alignment:
Q  172 caatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||| ||| |||||||||| |||||||||||||    
T  58385 caatcttgtagattccgatcatctaatctaaggtaagggtg 58425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 9724663 - 9724695
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||| ||||||||||||    
T  9724663 agagaaaataagtaggttaaagatttatataaa 9724695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 15700584 - 15700612
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  15700584 aaaataagtaggttaaggatttatataaa 15700612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 18074619 - 18074655
Alignment:
Q  172 caatcttgtagagtccaatcatctaatttaaggtaag 208  Q
    |||||||||||||||| | ||||||||||||||||||    
T  18074619 caatcttgtagagtccgaccatctaatttaaggtaag 18074655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 30247363 - 30247331
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||| |||||    
T  30247363 agagaaaataagtaggttaaggatttacataaa 30247331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 39262575 - 39262603
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  39262575 aaaataagtaggttaaggatttatataaa 39262603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 36508477 - 36508558
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  36508477 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 36508558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 20566753 - 20566674
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttttt 103  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| | |||| |||||||||||||||||    
T  20566753 agagaaaataagtaggttaaggatttatataaaatgg-agagttagaattagaaaataaggattacgtgaaacctgttttt 20566674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 21299874 - 21299946
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||||| |||||||||    
T  21299874 agagaaaataagtaggttaaggatttatataaaagggtagagttagaattagaaaatagggattacgtgaaac 21299946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 24212633 - 24212557
Alignment:
Q  28 aaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||| || ||| ||||||||| ||||||  ||| ||||||||||||||||||    
T  24212633 aaataagtaggttaaggatttatataaaaggggagagttagaattaaaaaacaaagattacgtgaaacctgtttttg 24212557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 19921860 - 19921779
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||| ||||||| || ||| |||||||||||||| | ||||  | |||||||||||||||    
T  19921860 agagaaaataagtaggttaaggatttttataaaaggggagagttagaattagaaaataaggatttcatgaaacctgtttttg 19921779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 35852895 - 35852813
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaatt-agaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||| |||| ||||||||||||| || ||| |||||||| | |||||| |||| ||||||||||||||||||    
T  35852895 agagaaaataagtagattaatgatttatataaaaggggagagttagaattaaaaaaacaaggattacgtgaaacctgtttttg 35852813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 18745072 - 18744992
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||||| |||||||| | ||||  |||||||||||||||||    
T  18745072 agagaaaataagtaggttaatgatttatataaaa-gggagagttagagttagaaaataaggatttcgtgaaacctgtttttg 18744992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 23199176 - 23199219
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  23199176 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 23199219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 23199045 - 23199111
Alignment:
Q  38 gttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||| || ||| ||| |||||||||| | |||| ||||||||||||||||||    
T  23199045 gttaaggatttatataaaaggggagagttaaaattagaaaataaggattacgtgaaacctgtttttg 23199111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 21398613 - 21398656
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| |||||||||| |||||||||||||    
T  21398613 gagcaatcttgtagagtccgatcatctaatctaaggtaagggtg 21398656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 26762627 - 26762552
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttt 102  Q
    ||||||||||| |||||||||||||||||| |  ||| |||||||||||||| | || | ||||||||||| ||||    
T  26762627 aaaataagtagtttaaggatttatataaaaggagagagttagaattagaaaataagggttacgtgaaacctatttt 26762552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 6551143 - 6551195
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaa 76  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||||||||||||    
T  6551143 agagaaaataagtaggttaaagatttatataaaa-gggagagttagaattagaa 6551195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 8503740 - 8503807
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    ||||||||||||||||||||||| || ||| || ||| ||||| |||||||| | |||| |||||||||    
T  8503740 aaaataagtaggttaaggatttacat-aaaggggagagttagagttagaaaataaggattacgtgaaac 8503807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 16063956 - 16063928
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  16063956 aaaataagtaggttaaggatttatataaa 16063928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 19921728 - 19921684
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||| |||||| || |||||||||| |||||||||||||    
T  19921728 tgagcaatctcgtagagaccgatcatctaatctaaggtaagggtg 19921684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 19923114 - 19923062
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattaga 75  Q
    ||||||||| |||||||||| ||||| ||||||| || ||| |||||||||||    
T  19923114 agagaaaattagtaggttaatgatttttataaaaggggagagttagaattaga 19923062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 19925864 - 19925812
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattaga 75  Q
    |||||||||||||||||||| ||||| |||||||  | ||| |||||||||||    
T  19925864 agagaaaataagtaggttaatgatttttataaaagaggagagttagaattaga 19925812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-24; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 1383388 - 1383468
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| ||||||||||||||||||    
T  1383388 agagaaaataagtaggttaaggatttatataaaa-ggaagagttagaattagaaaataaggattacgtgaaacctgtttttg 1383468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 2523570 - 2523651
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||| |||| || |||||||||||||||    
T  2523570 agagaaaataagtaggttaaggatttatataaaatgggagagttagaattaaaaaacaaggattacatgaaacctgtttttg 2523651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 24780663 - 24780744
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||||| |||| ||||||||||||||||||    
T  24780663 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaacaaggattacgtgaaacctgtttttg 24780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 27852879 - 27852802
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  27852879 aaaataagtaggttaaggatttatataaaaagggagagttagaattagaaaataaggattacgtgaaacctgtttttg 27852802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 28652396 - 28652477
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| ||| |||||||||| | |||| ||||||||||||||||||    
T  28652396 agagaaaataagtaggttaaggatttatataaaaggggagagttaaaattagaaaataaggataacgtgaaacctgtttttg 28652477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 31521395 - 31521317
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| |||| |||||||||||||    
T  31521395 gaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtaaaacctgtttttg 31521317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 9976158 - 9976077
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| | ||||||||||||||||    
T  9976158 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaagaaggattaagtgaaacctgtttttg 9976077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 21335094 - 21335175
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||||||  | | | |||||||||||||| | |||| ||||||||||||||||||    
T  21335094 agagaaaataagtaggttaaggatttatataaaagtggatagttagaattagaaaataaggattacgtgaaacctgtttttg 21335175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 22695439 - 22695359
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||| |||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  22695439 agagaaaataaataggttaaggatttatataaaa-gggagagttagaattagaaaataaggattacgtgaaacctgtttttg 22695359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 25142412 - 25142331
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| | ||||||||||||||||    
T  25142412 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaagaaggattatgtgaaacctgtttttg 25142331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 19201045 - 19201121
Alignment:
Q  28 aaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| |||||||| |||||||||    
T  19201045 aaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaaactgtttttg 19201121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 23968471 - 23968547
Alignment:
Q  28 aaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| |||||||| |||||||||    
T  23968471 aaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggatgacgtgaaaactgtttttg 23968547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 24516395 - 24516313
Alignment:
Q  23 agagaaaataagta-ggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||| |||||||||||||||||||  |||||| |||||||||||||| | |||| ||||||||||| ||||||    
T  24516395 agagaaaataagtatggttaaggatttatataaacgggaagagttagaattagaaaataaggattacgtgaaacctatttttg 24516313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 17307693 - 17307612
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||| || ||| |||||    
T  17307693 agagaaaataagtaggttaaggatttatataaaaagggagagttagaattagaaaataaggattacgtgcaaactgcttttg 17307612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 21315320 - 21315401
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| |||||||||||||  | ||| |||||||||||||| | |||| || |||||||||||||||    
T  21315320 agagaaaataagtaggttaaagatttatataaaagtggagagttagaattagaaaataaggattacatgaaacctgtttttg 21315401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 24436875 - 24436795
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||| |||||||||||| || ||| |||||||||||||| | |||| || |||||||||||||||    
T  24436875 agagaaaataagtaggttaagaatttatataaaa-gggagagttagaattagaaaataaggattacatgaaacctgtttttg 24436795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 5031097 - 5031141
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  5031097 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 5031141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 27484340 - 27484420
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttttt 103  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||   |||| |||||||| ||| ||||    
T  27484340 agagaaaataagtaggttaaggatttatataaaaagggagagttagaattagaaaaggaggattacgtgaaaactgctttt 27484420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 36841426 - 36841354
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    ||||||||||||||||||||||||||| |||||| ||||||  ||||||||||||| | |||| |||||||||    
T  36841426 agagaaaataagtaggttaaggatttacataaaagggaagagatagaattagaaaataaggattacgtgaaac 36841354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 10897005 - 10897083
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||| ||||||||||||| || ||| ||||||||||||| ||  ||| ||||||||||||||||||    
T  10897005 agaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaatca-agattacgtgaaacctgtttttg 10897083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 20916537 - 20916455
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacaggga-tcacgtgaaacctgtttttg 104  Q
    ||||||||||| |||||||| ||||||||||||| || ||| |||||||||||||| | ||| | ||||||||||||||||||    
T  20916537 agagaaaataaataggttaatgatttatataaaaggggagagttagaattagaaaataaggatttacgtgaaacctgtttttg 20916455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 10743895 - 10743970
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgt 99  Q
    |||||||||||||||||||| ||||||||||||| |  ||| |||||||||||||| | |||| |||||||||||||    
T  10743895 agagaaaataagtaggttaatgatttatataaaa-gagagagttagaattagaaaataaggattacgtgaaacctgt 10743970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 7672119 - 7672174
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||| ||||    
T  7672119 agagaaaataagtaggttaaggatttatataaaaaggtagagttagaattaaaaaa 7672174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 24780809 - 24780852
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  24780809 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 24780852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 36841310 - 36841267
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  36841310 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 36841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 18388042 - 18388131
Alignment:
Q  14 atggacatcagagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||| || |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| |  ||| |||||||| | |||||||    
T  18388042 atggaaataagagaaaataagtaggttaatgatttatataaaa-gggagagttagaattagaaaataatgattacgtgaaaaccgtttttg 18388131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 21369377 - 21369333
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  21369377 tgagcaatcttgtagagtccgatcatctaatctaaggtaagggtg 21369333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 2523716 - 2523759
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  2523716 gagcaatcttgtaaagtccgatcatctaatttaaggtaagggtg 2523759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 9976009 - 9975970
Alignment:
Q  172 caatcttgtagagtccaatcatctaatttaaggtaagggt 211  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  9976009 caatcttgtagagtccgatcatctaatttaaggtaagggt 9975970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 24436731 - 24436688
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  24436731 gagcaatcttgtagagtccgatcatctaatttaagataagggtg 24436688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 22251269 - 22251326
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaa--tggaagatttagaattagaaaa 78  Q
    ||||||||||||||||||||||||||||||||||   || ||| ||||||||||||||    
T  22251269 agagaaaataagtaggttaaggatttatataaaaggggggagagttagaattagaaaa 22251326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 149334 - 149385
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||| ||||||||||||| || ||| ||||||||| ||||    
T  149334 aaaataagtaggttaaagatttatataaaaggggagagttagaattataaaa 149385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 149474 - 149513
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  149474 aatcttgtagagtccgatcatctaatctaaggtaagggtg 149513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 6576813 - 6576762
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||| ||||||||| || ||| ||||||||| ||||    
T  6576813 aaaataagtaggttaaggatctatataaaaggggagagttagaattataaaa 6576762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 14179697 - 14179740
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||| | |||||||||| |||||||||||||    
T  14179697 gagcaatcttgtagagttcgatcatctaatataaggtaagggtg 14179740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 22251421 - 22251460
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  22251421 aatcttgtagagtctgatcatctaatttaaggtaagggtg 22251460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 22502050 - 22502011
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtg 22502011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 22509984 - 22509945
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtg 22509945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 31521252 - 31521209
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||    
T  31521252 gagcaatcttgtacagtccgatcatctaatttagggtaagggtg 31521209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 32214080 - 32214131
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||| ||||||||||||| |  ||| ||||||||||||||    
T  32214080 aaaataagtaggttaatgatttatataaaaggagagagttagaattagaaaa 32214131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 24865333 - 24865366
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaa 56  Q
    |||||||||||||| |||||||||||||||||||    
T  24865333 agagaaaataagtacgttaaggatttatataaaa 24865366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 41225266 - 41225344
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttt 101  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||  ||| |||||||||||||||    
T  41225266 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacatagattacgtgaaacctgttt 41225344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 41226519 - 41226597
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttt 101  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||  ||| |||||||||||||||    
T  41226519 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaacatagattacgtgaaacctgttt 41226597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 24723207 - 24723287
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  24723207 agagaaaataagtaggttaaggatttatataaaa-gggagagttagaattagaaaataaggattacgtgaaacctgtttttg 24723287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 46560284 - 46560203
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||| ||||||||    
T  46560284 agagaaaataagtaggttaaggatttatataaaaagggagagttagaattagaaaataaggattacgtgaaacatgtttttg 46560203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 20588867 - 20588786
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | ||||  | |||||||||||||||    
T  20588867 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaagaaggatttcatgaaacctgtttttg 20588786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 20593405 - 20593324
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | ||||  | |||||||||||||||    
T  20593405 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaagaaggatttcatgaaacctgtttttg 20593324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 42913257 - 42913176
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| || || ||||||||||||    
T  42913257 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacatggaacctgtttttg 42913176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 4595690 - 4595773
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagat--ttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| ||  |||  |||||||||||||| | |||| ||||||||||||||||||    
T  4595690 agagaaaataagtaggttaaggatttatataaaaggggggatagttagaattagaaaataaggattacgtgaaacctgtttttg 4595773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 8275844 - 8275921
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtt 100  Q
    |||||||||||||||||||||||||| ||||||| || ||| |||||||||||||| | |||| ||||||| ||||||    
T  8275844 agagaaaataagtaggttaaggatttttataaaaagggagagttagaattagaaaataaggattacgtgaagcctgtt 8275921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 20633453 - 20633534
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| |||||||||||||  | | | |||||||||||||| | |||| ||||||||||||||||||    
T  20633453 agagaaaataagtaggttaatgatttatataaaaatggatagttagaattagaaaataaggattacgtgaaacctgtttttg 20633534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 50545084 - 50545004
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||||||||| |||| | |||| ||||||||||||||||||    
T  50545084 agagaaaataagtaggttaaagatttatataaaa-gggagagttagaattaaaaaataaggattacgtgaaacctgtttttg 50545004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 21238904 - 21238982
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||| |||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||| ||||||    
T  21238904 agaaattaagtaggttaaggatttatataaaa-gggagagttagaattagaaaataaggattacgtgaaacctatttttg 21238982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 46197596 - 46197651
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  46197596 agagaaaataagtaggttaaggatttatataaaaagggagagttagaattagaaaa 46197651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 14237501 - 14237582
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| |  ||| |||||| ||||||| |  ||| ||||||||||||||||||    
T  14237501 agagaaaataagtaggttaatgatttatataaaaagagagagttagaaatagaaaataaagattacgtgaaacctgtttttg 14237582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 38056519 - 38056600
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||| ||||||||||||||||| || ||| |||||||||||||| | |||| ||||| || ||| |||||    
T  38056519 agagaaaataagtagggtaaggatttatataaaaagggagagttagaattagaaaataaggattacgtgcaaactgcttttg 38056600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 8885691 - 8885604
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaatt------agaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||      | ||||||||||| ||||||||| ||||||||    
T  8885691 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattaaaaaaaaaaaacagggattacgtgaaacttgtttttg 8885604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 22350930 - 22350850
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttttt 103  Q
    |||||||||||||||||||| ||||||||||||| || | | |||||||||||||| | ||||  |||||| |||||||||    
T  22350930 agagaaaataagtaggttaaagatttatataaaaggggatagttagaattagaaaataaggatttcgtgaagcctgttttt 22350850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 27652242 - 27652314
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    |||||||||||||||||||||||||| ||||||| || ||| |||||||||||||| | ||||  ||||||||    
T  27652242 agagaaaataagtaggttaaggatttttataaaaggggagagttagaattagaaaataaggatttcgtgaaac 27652314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 19676794 - 19676751
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  19676794 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 19676751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 23967910 - 23967848
Alignment:
Q  23 agagaaaataagtaggttaaggatttatat-aaaatggaagatttagaattagaaaacagggat 85  Q
    |||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||    
T  23967910 agagaaaataagtaggttaaggatttatattaaaatgga-gagttagaattagaaaatagggat 23967848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 7051771 - 7051847
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||| ||||||||||||||||||| || ||| |||||||| ||||| | |||| || |||||||||||||||    
T  7051771 aaaataagtaagttaaggatttatataaaa-gggagagttagaattggaaaataaggattacatgaaacctgtttttg 7051847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 21046020 - 21046061
Alignment:
Q  171 gcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  21046020 gcaatcttgtagagtccgatcatctaatttaaggtaagggtg 21046061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 19676939 - 19676871
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtg 91  Q
    |||||||||| ||||||||| ||||||||||||| || ||| |||||||||||||| | |||| |||||    
T  19676939 agagaaaatacgtaggttaaagatttatataaaaggggagagttagaattagaaaataaggattacgtg 19676871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 20633599 - 20633643
Alignment:
Q  168 tgagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  20633599 tgagcaatcttgtagagtccgatcatctaatttaagataagggtg 20633643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 20588721 - 20588678
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  20588721 gagcaatcttgtagagtccgatcatccaatttaaggtaagggtg 20588678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 20593259 - 20593216
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  20593259 gagcaatcttgtagagtccgatcatccaatttaaggtaagggtg 20593216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 48521603 - 48521549
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||    
T  48521603 agagaaaataagtaggttaaggatttatttaaaa-gggagagttagaattagaaaa 48521549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 21045876 - 21045953
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||| | ||||| |||| || ||| |||||||||||||| | |||| | ||||||||||||||||    
T  21045876 gaaaataagtaggttaag-acttatagaaaaggggagagttagaattagaaaataaggattatgtgaaacctgtttttg 21045953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 38886936 - 38886988
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||| ||||||||||||| || ||| ||||||||||||||    
T  38886936 agaaaataagtaggttaatgatttatataaaa-gggagagttagaattagaaaa 38886988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 16058287 - 16058326
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtg 16058326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 20846272 - 20846323
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||  ||||||| || ||| ||||||||||||||    
T  20846272 aaaataagtaggttaaggattcttataaaaggggagagttagaattagaaaa 20846323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 28193495 - 28193546
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||| ||||||| || ||| ||| ||||||||||    
T  28193495 aaaataagtaggttaaggatttttataaaaggggagagttaaaattagaaaa 28193546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 41225423 - 41225466
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||| |||| | ||||||||||||||||||||||||    
T  41225423 gagcaatcttgtcgagtacgatcatctaatttaaggtaagggtg 41225466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 41226676 - 41226719
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||| |||| | ||||||||||||||||||||||||    
T  41226676 gagcaatcttgtcgagtacgatcatctaatttaaggtaagggtg 41226719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 51274140 - 51274195
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||| |||||||||||||  | ||| ||||||||| ||||    
T  51274140 agagaaaataagtaggttaaagatttatataaaaaaggagagttagaattaaaaaa 51274195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 12710950 - 12710912
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaa 207  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  12710950 gagcaatcttgtagagtcccatcatctaatctaaggtaa 12710912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Original strand, 22823082 - 22823111
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||||||    
T  22823082 gaaaataagtaggttaaggatttatataaa 22823111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 7320441 - 7320469
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  7320441 aaaataagtaggttaaggatttatataaa 7320469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 21243605 - 21243633
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  21243605 aaaataagtaggttaaggatttatataaa 21243633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 39061513 - 39061485
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  39061513 aaaataagtaggttaaggatttatataaa 39061485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 51083358 - 51083294
Alignment:
Q  40 taaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||| || ||| |||||||||||||| | | |  || |||||||||||||||    
T  51083358 taaggatttatataaaaagggagagttagaattagaaaaaaagaaatacatgaaacctgtttttg 51083294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 13245 - 13326
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| | |||| |||||||||||||| |  ||| ||||||||||||||||||    
T  13245 agagaaaataagtaggttaaggatttatataaaaggcaagagttagaattagaaaataaagattacgtgaaacctgtttttg 13326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 54; Significance: 3e-22; HSPs: 3)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 13375 - 13456
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |  ||| ||||||||||||||||||    
T  13375 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaagattacgtgaaacctgtttttg 13456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 13525 - 13564
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  13525 aatcttgtagagtccgatcatctaatttaaggtaagggtg 13564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 14494 - 14522
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  14494 aaaataagtaggttaaggatttatataaa 14522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 60927 - 61008
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||| ||||||    
T  60927 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctatttttg 61008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 78008 - 78089
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| |  ||| |||||||||||||||| |||| | ||||||||||||||||    
T  78008 agagaaaataagtaggttaaggatttatataaaaggagagagttagaattagaaaacaaggattatgtgaaacctgtttttg 78089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 78154 - 78197
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  78154 gagcaatcttgtagagtacgatcatctaatttaaggtaagggtg 78197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 58975 - 58895
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttttt 103  Q
    |||||||||||| ||||||||||||||||||||| || ||| |||||||||||||| | |||| |||||||||||||||||    
T  58975 agagaaaataagcaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgttttt 58895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 58829 - 58786
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||    
T  58829 gagcaatcttgtagagtccgatcatctaaattaaggtaagggtg 58786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 23956 - 24035
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| ||||||||||| ||||||    
T  23956 agaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctatttttg 24035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 24100 - 24143
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  24100 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 24143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 21819 - 21738
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||| | |||| |||| |||||||||||||    
T  21819 agagaaaataagtaggttaaagatttatataaaaggggagagttagaattagaaaataaggattacgtaaaacctgtttttg 21738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 29416 - 29498
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacaggga-tcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | ||| | ||||||||||| ||||||    
T  29416 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggatttacgtgaaacctatttttg 29498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 58710 - 58791
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||| |||||||||||| || ||| |||||||||||||| | |||| | ||||||||||||||||    
T  58710 agagaaaataagtaggttaagcatttatataaaaggggagagttagaattagaaaataaggattatgtgaaacctgtttttg 58791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 21762 - 21805
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  21762 gagcaatcttgtagagtccgatcatctaatttaaggtaatggtg 21805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 2167 - 2086
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | | || ||||||||||| ||||||    
T  2167 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataagaattacgtgaaacctatttttg 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 105895 - 105976
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||| ||||| || ||| |||||| ||||||| | |||| ||||||||||||||||||    
T  105895 agagaaaataagtaggttaaggatttatttaaaaggggagagttagaactagaaaataaggattacgtgaaacctgtttttg 105976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 6625 - 6546
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgttttt 103  Q
    ||||||||||||||||||| |||||||||||||| || ||| |||||||||||||| | |||| |||||||||||||||||    
T  6625 agagaaaataagtaggttatggatttatataaaa-gggagagttagaattagaaaataaggattacgtgaaacctgttttt 6546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 35696 - 35617
Alignment:
Q  25 agaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||| |||||||||||||||||||||||||| ||  || |||||||||||||| | |||| ||||||||||||||||||    
T  35696 agaaattaagtaggttaaggatttatataaaaggggtgagttagaattagaaaataaggattacgtgaaacctgtttttg 35617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 347 - 265
Alignment:
Q  23 agagaaaataagta-ggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||| |||||||||||||||||||  |||||| |||||||||||||| | |||| ||||||||||| ||||||    
T  347 agagaaaataagtatggttaaggatttatataaacgggaagagttagaattagaaaataaggattacgtgaaacctatttttg 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 14443 - 14521
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| ||||| |||  |||||||    
T  14443 gaaaataagtaggttaaggatttatataaaagggaagagttagaattagaaaagaaggattacgtgcaacaagtttttg 14521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 23501 - 23579
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| ||||| |||  |||||||    
T  23501 gaaaataagtaggttaaggatttatataaaagggaagagttagaattagaaaagaaggattacgtgcaacaagtttttg 23579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 290 - 371
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||| |||| || |||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  290 agagaaaataagtagtttaaagacttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 440 - 480
Alignment:
Q  172 caatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  440 caatcttgtagagtctgatcatctaatttaaggtaagggtg 480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 4537 - 4617
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| | ||||||||| ||||||    
T  4537 agagaaaataagtaggttaaggatttatataaaa-gggagagttagaattagaaaataaggattatgtgaaacctatttttg 4617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 4683 - 4725
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggt 211  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  4683 gagcaatcttgtagagtccgatcatctaatttaaggtaagggt 4725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 2455 - 2374
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||| || ||||||||||||||| |  ||| |||||||||||||| | |||| ||||||||||||||||||    
T  2455 agagaaaataagtagcttcaggatttatataaaaggagagagttagaattagaaaataaggattacgtgaaacctgtttttg 2374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 8591 - 8671
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| |  ||| |||||||||||||| | |||| | ||||||||||||||||    
T  8591 agagaaaataagtaggttaaggatttatataaaa-gtgagagttagaattagaaaataaggattatgtgaaacctgtttttg 8671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 8135 - 8058
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||  |||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  8135 aaaataagtaggttaaacatttatataaaaagggagagttagaattagaaaataaggattacgtgaaacctgtttttg 8058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 10983 - 11064
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||| ||||||||| ||||||||||||| || ||| |||||||||||||| | |||| ||||||||||| ||||||    
T  10983 agagaaaataggtaggttaaagatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctttttttg 11064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 17378 - 17455
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||| ||||| |||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  17378 aaaataagtagtttaagaatttatataaaaggggagagttagaattagaaaataaggattacgtgaaacctgtttttg 17455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 23820 - 23769
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||| ||||||| || ||| | ||||||||||||    
T  23820 aaaataagtaggttaaggatttttataaaaggggagagtgagaattagaaaa 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 23715 - 23796
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | ||||   ||||||||| ||||||    
T  23715 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaagaaggattttgtgaaacctatttttg 23796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 23861 - 23904
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||    
T  23861 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtg 23904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 23187 - 23106
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||| |||||||||||||  | ||| |||||||||||||| | |||| || |||||||||||||||    
T  23187 agagaaaataagtaggttaatgatttatataaaaatggagagttagaattagaaaataaggattacctgaaacctgtttttg 23106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 5596 - 5515
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | ||||  |||| || |||||||||    
T  5596 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaataaggatttcgtgcaaactgtttttg 5515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 12365 - 12417
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaa 76  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||||||||||||    
T  12365 agagaaaataagtaggttaaagatttatataaaa-gggagagttagaattagaa 12417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 5172 - 5249
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||  |||||||||||| || ||| |||||||||||||| | |||| ||||||||||||||||||    
T  5172 aaaataagtaggttaaacatttatataaaaagggagagttagaattagaaaataaggattacgtgaaacctgtttttg 5249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 34931 - 34959
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  34931 aaaataagtaggttaaggatttatataaa 34959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 174450 - 174369
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||| |||||||||||||||| |||||  |||||| ||||||||||| | |||| ||||||||||| ||||||    
T  174450 agagaaaataagtgggttaaggatttatattaaatgagagattttgaattagaaaataaggattacgtgaaacctatttttg 174369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 143816 - 143738
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||| |||||||||||||  | ||| |||||||||||||| | | || ||||||||||||||||||    
T  143816 gaaaataagtaggttaatgatttatataaaagaggagagttagaattagaaaataagaattacgtgaaacctgtttttg 143738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 328130 - 328211
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||| ||||||||||||||||||||||| || ||| ||| |||||||||| | ||||  |||||||||||||||||    
T  328130 agagaaaataggtaggttaaggatttatataaaaggggagagttaaaattagaaaataaggattgcgtgaaacctgtttttg 328211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 73295 - 73266
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||||||    
T  73295 gaaaataagtaggttaaggatttatataaa 73266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 76145 - 76116
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||||||    
T  76145 gaaaataagtaggttaaggatttatataaa 76116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 65910 - 65938
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  65910 aaaataagtaggttaaggatttatataaa 65938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 4091 - 4036
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  4091 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattagaaaa 4036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 10269 - 10350
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||| ||||||||||||||||||||||||||  | ||| |||||||||||||| | |||| | ||||||||| ||||||    
T  10269 agagaaattaagtaggttaaggatttatataaaagaggagagttagaattagaaaataaggattaagtgaaacctatttttg 10350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 61678 - 61733
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  61678 agagaaaataagtaggttaaggatttatataaaagagaagagttagaattagaaaa 61733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 40316 - 40234
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa-cagggatcacgtgaaacctgtttttg 104  Q
    ||||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||  |  ||| ||||||||||||||||||    
T  40316 agagaaaattagtaggttaaagatttatataaaagggaagagttagaattagaaaataaatgattacgtgaaacctgtttttg 40234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 5142 - 5063
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | |||| | |||||| |||||||||    
T  5142 agagaaaataagtaggttaaggatttatataaaa-gggagagttagaattagaaaataaggattatgtgaaa-ctgtttttg 5063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 16579 - 16660
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||||||||||||||||||||||||| |  ||| |||||||||||||| | |||| ||||| || ||| |||||    
T  16579 agagaaaataagtaggttaaggatttatataaaaggagagagttagaattagaaaataaggattacgtgcaaactgcttttg 16660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 3103 - 3031
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||| |||| | |||| || ||||||    
T  3103 agagaaaataagtaggttaaggatttatataaaaggggagagttagaattacaaaataaggattacatgaaac 3031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 18471 - 18543
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    ||||||||||||||||||||||||||| |||||| ||  || |||||||||||||| | |||| |||||||||    
T  18471 agagaaaataagtaggttaaggatttaaataaaaggggggagttagaattagaaaataaggattacgtgaaac 18543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 18613 - 18652
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  18613 aatcttgtagagtccgatcatctaatctaaggtaagggtg 18652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 5230 - 5175
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||| ||||    
T  5230 agagaaaataagtaggttaaggatttatataaaaagggagagttagaattaaaaaa 5175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 2286 - 2341
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||||||| || ||  ||||||||||||||    
T  2286 agagaaaataagtaggttaaggatttatataaaaagggagggttagaattagaaaa 2341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 5230 - 5175
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||||| ||||    
T  5230 agagaaaataagtaggttaaggatttatataaaaagggagagttagaattaaaaaa 5175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 22357 - 22412
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||    
T  22357 agagaaaataagtaggttaaggatttttataaaagggaagagttaaaattagaaaa 22412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 35316 - 35395
Alignment:
Q  14 atggacatcagagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaa 94  Q
    ||||| || ||||||||||||||||||||||| ||||||| || || ||| |||||||||||||| | |||| ||||||||    
T  35316 atggaaataagagaaaataagtaggttaaggaattatatagaa-gggagagttagaattagaaaataaggattacgtgaaa 35395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 2033 - 2088
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||| ||| ||||||||||||| || ||| ||||||||||||||    
T  2033 agagaaaataagtaggataaagatttatataaaaggggagagttagaattagaaaa 2088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 2225 - 2147
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||| ||||||||||||| |||||||||||| || ||| |||||   |||||| | |||| ||||||||||||||||||    
T  2225 agagaaattaagtaggttaagaatttatataaaaggggagagttaga---agaaaataaggattacgtgaaacctgtttttg 2147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 20255 - 20201
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||    
T  20255 agagaaaataagtaggttaaagatttatataaaa-gggagagttagaattagaaaa 20201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 69704 - 69759
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||||||||||||||||||| ||||||||||||  | ||| ||||||||||||||    
T  69704 agagaaaataagtaggttaagaatttatataaaaaaggagagttagaattagaaaa 69759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 79132 - 79089
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  79132 gagcaatcttgtagagttcgatcatctaatttaaggtaagggtg 79089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 79270 - 79199
Alignment:
Q  32 aagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    |||||||||||| |||||||||||  ||| || |||||||||||||| | ||||  |||||||||||||||||    
T  79270 aagtaggttaagaatttatataaagagga-gagttagaattagaaaataaggatttcgtgaaacctgtttttg 79199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 186043 - 186121
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||| ||||||||||||| |||||||||||| || ||| |||||   |||||| | |||| ||||||||||||||||||    
T  186043 agagaaattaagtaggttaagaatttatataaaaggggagagttaga---agaaaataaggattacgtgaaacctgtttttg 186121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 34421 - 34379
Alignment:
Q  170 agcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  34421 agcaattttgtagagtccgatcatctaatttaaggtaagggtg 34379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 11371 - 11303
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaac 95  Q
    ||||||||||||||||||||||||||| ||| || ||| |||||||||||||| | ||||  ||||||||    
T  11371 gaaaataagtaggttaaggatttatat-aaaggggagagttagaattagaaaataaggatttcgtgaaac 11303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 11232 - 11193
Alignment:
Q  173 aatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  11232 aatcttgtagagtccgatcatctaatctaaggtaagggtg 11193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 2319 - 2385
Alignment:
Q  39 ttaaggatttatataaaa--tggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||||||||  |||| || |||||||||||||| | |||| ||||||||||||||||||    
T  2319 ttaaggatttatataaaaaatgga-gagttagaattagaaaataaggattacgtgaaacctgtttttg 2385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 2423 - 2466
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||    
T  2423 gagcaatcttgtaaagtccgaacatctaatttaaggtaagggtg 2466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 9250 - 9190
Alignment:
Q  44 gatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaacctgtttttg 104  Q
    ||||||||||||| || ||| |||||||||||||| | | || ||||||||||||||||||    
T  9250 gatttatataaaaggggagagttagaattagaaaataagtattacgtgaaacctgtttttg 9190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 13656 - 13577
Alignment:
Q  14 atggacatcagagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaacagggatcacgtgaaa 94  Q
    ||||| || ||| |||||||||||||||| ||||||||||||| ||  || |||||||||||||| | |||| ||||||||    
T  13656 atggaaataagataaaataagtaggttaaagatttatataaaa-gggtgagttagaattagaaaataaggattacgtgaaa 13577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1992 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 852 - 801
Alignment:
Q  27 aaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    |||||||||||||||||||||| ||||||| || |||  |||||||||||||    
T  852 aaaataagtaggttaaggatttttataaaaggggagaggtagaattagaaaa 801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1817 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1817
Description:

Target: scaffold1817; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 54
Target Start/End: Original strand, 743 - 774
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataa 54  Q
    ||||||||||||||||||||||||||||||||    
T  743 agagaaaataagtaggttaaggatttatataa 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 2341 - 2395
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||||||||||||||||||| |||||||| ||| || ||| ||||||||||||||    
T  2341 agagaaaataagtaggttaagaatttatat-aaaggggagagttagaattagaaaa 2395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 5537 - 5494
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
T  5537 gagcaatctcgtagagaccaatcatctaatctaaggtaagggtg 5494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 5657 - 5628
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||||||    
T  5657 gaaaataagtaggttaaggatttatataaa 5628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 28634 - 28595
Alignment:
Q  169 gagcaatcttgtagagtccaatcatctaatttaaggtaag 208  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  28634 gagcaatcttgtagagtcctatcatctaatctaaggtaag 28595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 1287 - 1245
Alignment:
Q  170 agcaatcttgtagagtccaatcatctaatttaaggtaagggtg 212  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||    
T  1287 agcaattttgtagaatccgatcatctaatttaaggtaagggtg 1245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 12118 - 12088
Alignment:
Q  23 agagaaaataagtaggttaaggatttatata 53  Q
    |||||||||||||||||||||||||||||||    
T  12118 agagaaaataagtaggttaaggatttatata 12088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Original strand, 16264 - 16293
Alignment:
Q  26 gaaaataagtaggttaaggatttatataaa 55  Q
    ||||||||||||||||||||||||||||||    
T  16264 gaaaataagtaggttaaggatttatataaa 16293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1991 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1991
Description:

Target: scaffold1991; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 445 - 473
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  445 aaaataagtaggttaaggatttatataaa 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 558 - 526
Alignment:
Q  23 agagaaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||| ||||||||||||    
T  558 agagaaaataagtaggttaatgatttatataaa 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 15465 - 15493
Alignment:
Q  27 aaaataagtaggttaaggatttatataaa 55  Q
    |||||||||||||||||||||||||||||    
T  15465 aaaataagtaggttaaggatttatataaa 15493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 721 - 665
Alignment:
Q  23 agagaaaat-aagtaggttaaggatttatataaaatggaagatttagaattagaaaa 78  Q
    ||||||||| |||| |||||||||||| ||||||| || ||| ||||||||||||||    
T  721 agagaaaattaagttggttaaggatttttataaaaggggagagttagaattagaaaa 665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University