View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6876A_low_451 (Length: 206)

Name: NF6876A_low_451
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6876A_low_451
NF6876A_low_451
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-195)||(248769-248944)
[»] chr7 (35 HSPs)
chr7 (20-195)||(12455817-12455992)
chr7 (22-195)||(13021474-13021647)
chr7 (20-182)||(8212100-8212262)
chr7 (20-188)||(11306229-11306397)
chr7 (20-188)||(16950437-16950605)
chr7 (20-173)||(6413626-6413779)
chr7 (20-188)||(26118571-26118739)
chr7 (20-188)||(49152416-49152584)
chr7 (20-150)||(26288041-26288170)
chr7 (20-188)||(1373-1541)
chr7 (31-188)||(14286342-14286499)
chr7 (31-195)||(14129999-14130163)
chr7 (20-188)||(14264210-14264378)
chr7 (31-195)||(14433817-14433981)
chr7 (66-195)||(12456940-12457069)
chr7 (20-188)||(16072260-16072428)
chr7 (20-188)||(18053919-18054087)
chr7 (49-182)||(15340575-15340708)
chr7 (20-188)||(19147326-19147494)
chr7 (20-188)||(23199709-23199877)
chr7 (20-188)||(23505836-23506004)
chr7 (20-187)||(15102568-15102735)
chr7 (20-188)||(20746725-20746893)
chr7 (20-171)||(13665663-13665814)
chr7 (61-163)||(14954775-14954877)
chr7 (20-149)||(11388433-11388561)
chr7 (119-188)||(13968634-13968703)
chr7 (61-163)||(12687656-12687758)
chr7 (61-161)||(11553117-11553217)
chr7 (77-131)||(12206823-12206877)
chr7 (85-134)||(15204058-15204107)
chr7 (64-161)||(35964865-35964962)
chr7 (85-161)||(14037986-14038062)
chr7 (85-161)||(14348016-14348092)
chr7 (61-161)||(18177897-18177997)
[»] scaffold0060 (1 HSPs)
scaffold0060 (20-195)||(42939-43114)
[»] chr4 (28 HSPs)
chr4 (20-195)||(33223043-33223218)
chr4 (20-188)||(44661845-44662013)
chr4 (20-188)||(20891107-20891275)
chr4 (20-188)||(3264773-3264941)
chr4 (20-188)||(11207210-11207378)
chr4 (20-182)||(29453522-29453684)
chr4 (20-188)||(16146037-16146205)
chr4 (20-195)||(1649249-1649424)
chr4 (20-173)||(16752718-16752871)
chr4 (20-188)||(15070538-15070706)
chr4 (20-188)||(15246049-15246217)
chr4 (20-188)||(15359069-15359237)
chr4 (24-188)||(27900515-27900679)
chr4 (20-190)||(15003341-15003511)
chr4 (20-182)||(51606166-51606328)
chr4 (85-188)||(15077825-15077928)
chr4 (61-163)||(18227190-18227292)
chr4 (85-142)||(15415051-15415108)
chr4 (85-161)||(14652498-14652574)
chr4 (85-152)||(8706108-8706175)
chr4 (79-161)||(7090616-7090698)
chr4 (61-163)||(14680733-14680835)
chr4 (85-163)||(15149750-15149828)
chr4 (31-131)||(14159628-14159728)
chr4 (85-154)||(14851119-14851188)
chr4 (20-97)||(42703028-42703105)
chr4 (61-161)||(14266645-14266745)
chr4 (63-163)||(16676447-16676547)
[»] chr8 (35 HSPs)
chr8 (20-188)||(12304949-12305117)
chr8 (20-188)||(804095-804263)
chr8 (20-188)||(6603849-6604017)
chr8 (20-188)||(6679302-6679470)
chr8 (20-188)||(14565333-14565501)
chr8 (20-188)||(22061855-22062023)
chr8 (20-188)||(29303848-29304016)
chr8 (20-190)||(21324829-21324999)
chr8 (20-188)||(31416896-31417064)
chr8 (20-188)||(1266430-1266597)
chr8 (20-188)||(23655118-23655286)
chr8 (20-188)||(21681892-21682060)
chr8 (20-182)||(31571270-31571432)
chr8 (20-190)||(20008041-20008211)
chr8 (23-190)||(19851605-19851772)
chr8 (23-190)||(19857641-19857808)
chr8 (30-190)||(21840618-21840778)
chr8 (20-188)||(22051054-22051222)
chr8 (20-145)||(20010365-20010490)
chr8 (96-188)||(16271646-16271738)
chr8 (20-107)||(28982548-28982635)
chr8 (20-107)||(28987768-28987855)
chr8 (20-101)||(16265127-16265208)
chr8 (64-163)||(19978202-19978301)
chr8 (85-163)||(15533636-15533714)
chr8 (85-161)||(23949176-23949252)
chr8 (64-142)||(20388334-20388412)
chr8 (61-163)||(32600376-32600478)
chr8 (61-161)||(20396574-20396674)
chr8 (64-187)||(20652756-20652879)
chr8 (31-134)||(22377929-22378032)
chr8 (31-134)||(22384104-22384207)
chr8 (79-161)||(23650291-23650373)
chr8 (85-190)||(16408465-16408570)
chr8 (79-131)||(21167016-21167068)
[»] chr6 (32 HSPs)
chr6 (20-188)||(24364401-24364569)
chr6 (20-188)||(10468973-10469141)
chr6 (20-188)||(14381591-14381759)
chr6 (33-182)||(8766278-8766427)
chr6 (20-188)||(17415475-17415643)
chr6 (20-181)||(22796763-22796924)
chr6 (20-188)||(18800931-18801099)
chr6 (20-188)||(27560741-27560909)
chr6 (20-182)||(28282943-28283105)
chr6 (22-188)||(21471592-21471758)
chr6 (20-188)||(15459325-15459493)
chr6 (20-182)||(25768180-25768342)
chr6 (20-119)||(25750798-25750897)
chr6 (20-130)||(14131361-14131471)
chr6 (20-149)||(34645749-34645878)
chr6 (20-108)||(25750935-25751023)
chr6 (77-142)||(1640818-1640883)
chr6 (20-149)||(21564295-21564424)
chr6 (79-161)||(27331584-27331666)
chr6 (79-161)||(27392324-27392406)
chr6 (20-149)||(11287761-11287890)
chr6 (122-195)||(19453511-19453584)
chr6 (20-161)||(23078458-23078599)
chr6 (61-161)||(1543235-1543335)
chr6 (49-149)||(11280668-11280768)
chr6 (49-149)||(19879316-19879416)
chr6 (91-163)||(22433929-22434001)
chr6 (85-163)||(16963516-16963594)
chr6 (61-161)||(12498056-12498156)
chr6 (61-161)||(12510745-12510845)
chr6 (91-163)||(19864747-19864819)
chr6 (79-163)||(25765439-25765523)
[»] scaffold0093 (1 HSPs)
scaffold0093 (20-188)||(26417-26585)
[»] chr5 (30 HSPs)
chr5 (20-188)||(22502718-22502886)
chr5 (20-195)||(23080243-23080418)
chr5 (20-188)||(22381238-22381406)
chr5 (20-188)||(14887152-14887320)
chr5 (20-188)||(25848114-25848282)
chr5 (20-188)||(20342321-20342489)
chr5 (20-188)||(37545657-37545826)
chr5 (20-188)||(24798558-24798726)
chr5 (20-188)||(22236081-22236249)
chr5 (20-188)||(17269494-17269662)
chr5 (20-188)||(23442454-23442622)
chr5 (20-188)||(22461991-22462159)
chr5 (20-188)||(20821492-20821660)
chr5 (20-173)||(21890935-21891088)
chr5 (20-182)||(28895109-28895271)
chr5 (20-182)||(28923935-28924097)
chr5 (22-182)||(20773801-20773961)
chr5 (20-149)||(24735811-24735940)
chr5 (20-149)||(24749754-24749883)
chr5 (79-161)||(26738893-26738975)
chr5 (61-163)||(22134766-22134868)
chr5 (77-187)||(23503539-23503649)
chr5 (85-134)||(21498251-21498300)
chr5 (97-149)||(21831943-21831995)
chr5 (79-134)||(23516657-23516712)
chr5 (20-119)||(24737015-24737114)
chr5 (85-163)||(23573864-23573942)
chr5 (85-131)||(25423311-25423357)
chr5 (82-187)||(11210856-11210961)
chr5 (85-161)||(21339474-21339550)
[»] chr2 (20 HSPs)
chr2 (20-188)||(11358393-11358561)
chr2 (20-182)||(20832741-20832903)
chr2 (20-188)||(1063507-1063675)
chr2 (20-188)||(31830414-31830582)
chr2 (20-188)||(23293714-23293882)
chr2 (20-188)||(12574109-12574277)
chr2 (20-188)||(23276532-23276700)
chr2 (20-182)||(27787497-27787659)
chr2 (20-106)||(24654101-24654187)
chr2 (20-149)||(27365637-27365766)
chr2 (86-195)||(45529333-45529442)
chr2 (64-163)||(30211461-30211560)
chr2 (64-142)||(23087250-23087328)
chr2 (85-154)||(21325819-21325888)
chr2 (20-64)||(24945123-24945167)
chr2 (20-161)||(21145576-21145717)
chr2 (85-134)||(23138858-23138907)
chr2 (85-134)||(23550648-23550697)
chr2 (79-163)||(24675304-24675388)
chr2 (85-161)||(24825828-24825904)
[»] scaffold0235 (1 HSPs)
scaffold0235 (20-188)||(21653-21821)
[»] scaffold0114 (3 HSPs)
scaffold0114 (20-195)||(20278-20453)
scaffold0114 (25-195)||(43666-43836)
scaffold0114 (25-195)||(44678-44848)
[»] chr1 (20 HSPs)
chr1 (20-188)||(37677219-37677388)
chr1 (20-188)||(20294552-20294720)
chr1 (20-196)||(22433159-22433335)
chr1 (20-170)||(20075128-20075278)
chr1 (20-188)||(31550232-31550400)
chr1 (20-188)||(11382734-11382902)
chr1 (20-190)||(41307965-41308135)
chr1 (20-188)||(20940114-20940282)
chr1 (20-188)||(19854454-19854622)
chr1 (20-117)||(20244340-20244437)
chr1 (22-188)||(19664927-19665093)
chr1 (20-182)||(20835945-20836107)
chr1 (20-173)||(20856827-20856980)
chr1 (79-161)||(20250049-20250131)
chr1 (61-161)||(19106548-19106648)
chr1 (20-163)||(17045091-17045234)
chr1 (78-161)||(21747732-21747815)
chr1 (85-163)||(16078728-16078806)
chr1 (20-57)||(20395175-20395212)
chr1 (85-161)||(20136983-20137059)
[»] scaffold0089 (1 HSPs)
scaffold0089 (20-188)||(16695-16863)
[»] chr3 (30 HSPs)
chr3 (20-188)||(10383723-10383891)
chr3 (20-188)||(16329866-16330034)
chr3 (20-188)||(47123698-47123866)
chr3 (24-188)||(11961241-11961405)
chr3 (20-188)||(15953175-15953343)
chr3 (20-188)||(16836717-16836885)
chr3 (33-182)||(12360755-12360904)
chr3 (20-188)||(8759289-8759457)
chr3 (20-188)||(13941778-13941946)
chr3 (20-188)||(14571602-14571770)
chr3 (20-182)||(41177276-41177438)
chr3 (20-188)||(10420252-10420420)
chr3 (20-188)||(18134553-18134721)
chr3 (21-142)||(12850532-12850653)
chr3 (40-188)||(11303980-11304128)
chr3 (20-182)||(16381143-16381302)
chr3 (22-188)||(13322859-13323025)
chr3 (43-188)||(44777024-44777169)
chr3 (64-142)||(15227447-15227525)
chr3 (125-188)||(17492489-17492552)
chr3 (85-163)||(16371222-16371300)
chr3 (20-129)||(13972386-13972495)
chr3 (20-129)||(14086427-14086536)
chr3 (85-161)||(15208700-15208776)
chr3 (85-161)||(15247956-15248032)
chr3 (79-134)||(9522522-9522577)
chr3 (85-163)||(12498057-12498135)
chr3 (61-163)||(16691945-16692047)
chr3 (79-161)||(16756830-16756912)
chr3 (79-131)||(14876774-14876826)
[»] scaffold0058 (1 HSPs)
scaffold0058 (20-182)||(19276-19438)
[»] scaffold0404 (1 HSPs)
scaffold0404 (20-190)||(4906-5076)
[»] scaffold0067 (3 HSPs)
scaffold0067 (20-190)||(52159-52329)
scaffold0067 (20-190)||(61193-61363)
scaffold0067 (20-190)||(67581-67751)
[»] scaffold0069 (1 HSPs)
scaffold0069 (20-188)||(38869-39037)
[»] scaffold0034 (2 HSPs)
scaffold0034 (20-188)||(13883-14051)
scaffold0034 (20-188)||(4935-5103)
[»] scaffold0071 (1 HSPs)
scaffold0071 (20-195)||(49182-49357)
[»] scaffold1124 (1 HSPs)
scaffold1124 (20-188)||(254-422)
[»] scaffold0518 (1 HSPs)
scaffold0518 (33-195)||(10938-11100)
[»] scaffold0005 (3 HSPs)
scaffold0005 (20-182)||(260464-260626)
scaffold0005 (79-163)||(278837-278921)
scaffold0005 (85-161)||(164718-164794)
[»] scaffold0113 (2 HSPs)
scaffold0113 (20-134)||(16832-16946)
scaffold0113 (20-182)||(25853-26015)
[»] scaffold0742 (1 HSPs)
scaffold0742 (20-188)||(5369-5537)
[»] scaffold0108 (1 HSPs)
scaffold0108 (20-188)||(47280-47448)
[»] scaffold0010 (2 HSPs)
scaffold0010 (20-188)||(42315-42483)
scaffold0010 (20-188)||(47381-47549)
[»] scaffold0004 (3 HSPs)
scaffold0004 (20-188)||(322860-323028)
scaffold0004 (24-188)||(117728-117892)
scaffold0004 (20-188)||(385975-386143)
[»] scaffold0326 (1 HSPs)
scaffold0326 (20-170)||(18537-18687)
[»] scaffold0266 (1 HSPs)
scaffold0266 (20-182)||(14241-14403)
[»] scaffold0120 (2 HSPs)
scaffold0120 (20-182)||(1512-1674)
scaffold0120 (85-131)||(6244-6290)
[»] scaffold0102 (1 HSPs)
scaffold0102 (20-182)||(39895-40057)
[»] scaffold0239 (1 HSPs)
scaffold0239 (20-185)||(12766-12931)
[»] scaffold0483 (1 HSPs)
scaffold0483 (20-188)||(10065-10233)
[»] scaffold0298 (3 HSPs)
scaffold0298 (20-188)||(17113-17281)
scaffold0298 (20-182)||(20139-20301)
scaffold0298 (20-188)||(13343-13511)
[»] scaffold0124 (2 HSPs)
scaffold0124 (20-188)||(381-549)
scaffold0124 (20-188)||(11044-11212)
[»] scaffold0049 (1 HSPs)
scaffold0049 (20-188)||(51845-52013)
[»] scaffold0035 (1 HSPs)
scaffold0035 (20-188)||(2907-3075)
[»] scaffold0011 (3 HSPs)
scaffold0011 (20-188)||(195685-195852)
scaffold0011 (20-188)||(148726-148894)
scaffold0011 (20-161)||(26542-26683)
[»] scaffold0193 (1 HSPs)
scaffold0193 (20-187)||(1152-1319)
[»] scaffold0001 (2 HSPs)
scaffold0001 (20-170)||(90932-91082)
scaffold0001 (85-161)||(448280-448356)
[»] scaffold0367 (1 HSPs)
scaffold0367 (20-188)||(7220-7388)
[»] scaffold0101 (1 HSPs)
scaffold0101 (76-195)||(5427-5546)
[»] scaffold0139 (2 HSPs)
scaffold0139 (40-190)||(1129-1279)
scaffold0139 (20-188)||(27675-27843)
[»] scaffold0924 (1 HSPs)
scaffold0924 (20-188)||(4047-4215)
[»] scaffold0523 (1 HSPs)
scaffold0523 (20-188)||(26-194)
[»] scaffold0465 (1 HSPs)
scaffold0465 (20-188)||(1216-1384)
[»] scaffold0203 (1 HSPs)
scaffold0203 (20-188)||(14233-14401)
[»] scaffold0192 (1 HSPs)
scaffold0192 (20-188)||(26298-26466)
[»] scaffold0053 (2 HSPs)
scaffold0053 (20-188)||(57799-57966)
scaffold0053 (40-182)||(49021-49163)
[»] scaffold0026 (3 HSPs)
scaffold0026 (76-188)||(37414-37526)
scaffold0026 (20-188)||(38156-38324)
scaffold0026 (20-134)||(27373-27487)
[»] scaffold0249 (1 HSPs)
scaffold0249 (20-146)||(5026-5152)
[»] scaffold0348 (1 HSPs)
scaffold0348 (20-188)||(6339-6508)
[»] scaffold0106 (3 HSPs)
scaffold0106 (20-188)||(31566-31734)
scaffold0106 (85-161)||(14260-14336)
scaffold0106 (75-163)||(17653-17741)
[»] scaffold0029 (3 HSPs)
scaffold0029 (20-188)||(95984-96152)
scaffold0029 (20-142)||(112715-112837)
scaffold0029 (61-161)||(109820-109920)
[»] scaffold0395 (1 HSPs)
scaffold0395 (20-142)||(5942-6064)
[»] scaffold0222 (1 HSPs)
scaffold0222 (36-188)||(3337-3489)
[»] scaffold0156 (1 HSPs)
scaffold0156 (20-188)||(27382-27549)
[»] scaffold0585 (1 HSPs)
scaffold0585 (20-142)||(7064-7186)
[»] scaffold0309 (1 HSPs)
scaffold0309 (20-190)||(9954-10119)
[»] scaffold0682 (1 HSPs)
scaffold0682 (21-146)||(348-473)
[»] scaffold1710 (1 HSPs)
scaffold1710 (60-188)||(85-213)
[»] scaffold0600 (1 HSPs)
scaffold0600 (20-188)||(4031-4199)
[»] scaffold0751 (1 HSPs)
scaffold0751 (20-146)||(1950-2076)
[»] scaffold0020 (1 HSPs)
scaffold0020 (31-163)||(180384-180516)
[»] scaffold1355 (1 HSPs)
scaffold1355 (86-161)||(898-973)
[»] scaffold0333 (2 HSPs)
scaffold0333 (85-161)||(15713-15789)
scaffold0333 (85-161)||(15876-15952)
[»] scaffold0090 (2 HSPs)
scaffold0090 (85-148)||(19070-19133)
scaffold0090 (85-148)||(23232-23295)
[»] scaffold0064 (2 HSPs)
scaffold0064 (64-131)||(28808-28875)
scaffold0064 (64-131)||(40799-40866)
[»] scaffold0507 (1 HSPs)
scaffold0507 (20-134)||(9126-9240)
[»] scaffold0044 (1 HSPs)
scaffold0044 (61-163)||(14557-14659)
[»] scaffold0012 (3 HSPs)
scaffold0012 (91-161)||(229270-229340)
scaffold0012 (20-161)||(219426-219567)
scaffold0012 (77-149)||(33016-33088)
[»] scaffold0130 (1 HSPs)
scaffold0130 (77-142)||(10767-10832)
[»] scaffold0076 (1 HSPs)
scaffold0076 (20-129)||(33718-33827)
[»] scaffold0023 (1 HSPs)
scaffold0023 (85-134)||(4490-4539)
[»] scaffold0692 (1 HSPs)
scaffold0692 (49-149)||(3896-3996)
[»] scaffold0574 (1 HSPs)
scaffold0574 (20-92)||(4217-4289)
[»] scaffold0396 (1 HSPs)
scaffold0396 (85-161)||(4253-4329)
[»] scaffold0379 (1 HSPs)
scaffold0379 (85-161)||(12986-13062)
[»] scaffold0739 (1 HSPs)
scaffold0739 (40-131)||(178-269)
[»] scaffold0447 (1 HSPs)
scaffold0447 (20-131)||(10511-10622)
[»] scaffold0375 (1 HSPs)
scaffold0375 (79-154)||(3735-3810)
[»] scaffold0091 (1 HSPs)
scaffold0091 (61-163)||(7987-8089)
[»] scaffold0042 (1 HSPs)
scaffold0042 (85-163)||(65626-65704)
[»] scaffold0411 (1 HSPs)
scaffold0411 (61-134)||(15115-15188)
[»] scaffold0138 (1 HSPs)
scaffold0138 (20-133)||(16502-16615)
[»] scaffold0676 (1 HSPs)
scaffold0676 (97-161)||(6247-6311)
[»] scaffold0282 (1 HSPs)
scaffold0282 (85-161)||(16425-16501)
[»] scaffold0244 (1 HSPs)
scaffold0244 (77-149)||(26178-26250)
[»] scaffold0225 (1 HSPs)
scaffold0225 (77-149)||(23607-23679)
[»] scaffold0213 (1 HSPs)
scaffold0213 (139-195)||(6312-6368)
[»] scaffold0180 (1 HSPs)
scaffold0180 (85-161)||(32761-32837)
[»] scaffold0074 (1 HSPs)
scaffold0074 (85-161)||(3361-3437)
[»] scaffold0028 (1 HSPs)
scaffold0028 (61-161)||(43351-43451)


Alignment Details
Target: scaffold0009 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 248769 - 248944
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  248769 cacccgtcataggagtgaccctcagaaaaacatgatcaccctcctgaaactctagggactttctccgcttgtcatggtaactcttctgtcgactctgcga 248868  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  248869 cgctttcatcttttcccttatcatcttgactttcttagtagtctcatgaaccaagttcggtcccaacaccacactc 248944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 9e-69; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 12455817 - 12455992
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  12455817 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactctagggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 12455916  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
     |||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||| ||||||| ||||    
T  12455917 cgctttcatcttttcccttatcaccttgactttctcagtagtctcatgtaccaagtccggtcccaacaccacactc 12455992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 22 - 195
Target Start/End: Original strand, 13021474 - 13021647
Alignment:
Q  22 cccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaag 121  Q
    ||||||| |||||| ||||||||||||||||||||| | || ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  13021474 cccgtcataggagtgaccctcagaaaaacatgatcaccgtcttgaaactctagggcctttttccgcttgtcatggtaactcttctgtcgactctgcgaag 13021573  T
Q  122 ctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
    ||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||| ||||    
T  13021574 ctttcatcttttcccttatcatcttgaccttctcagtagtctcatgaaccaagtccggtcctaacaccacactc 13021647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 8212262 - 8212100
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  8212262 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 8212163  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
    ||||||||||||||||||||||| | | ||||||| |||||||||||||||||| ||||||||    
T  8212162 agctttcatcttttcccttatcaacctgactttctcagtagtctcatgaaccaaatccggtcc 8212100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 11306397 - 11306229
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  11306397 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 11306298  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||| | | ||||||| ||||||||||||||| || |||||||| |||||    
T  11306297 agctttcatcttttcccttatcaacctgactttctcagtagtctcatgaactaaatccggtcccaacac 11306229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 16950605 - 16950437
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||||||||  | ||||||||||||||||||||||||||||||||| ||||||||||    
T  16950605 cacccgtcataggagtaactctcagaaaaacatgatcaccctcctgaaactcatgggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 16950506  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
      ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||||    
T  16950505 cactttcatcttttcccttatcatcttgactttctcagtagtctgatgaaccaagtcctgtcccaacac 16950437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 6413626 - 6413779
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||||||||    
T  6413626 cacccgtcataggagtaaccctcagaaacacatgatcaccctcctgaaactcaaaggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 6413725  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaa 173  Q
     |||||||| ||||||||||||||||| ||||||| |||||||| |||||||||    
T  6413726 tgctttcatgttttcccttatcatcttgactttctcagtagtctgatgaaccaa 6413779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 26118739 - 26118571
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  |||| || |||||||||||||||||||||||| ||||||||||    
T  26118739 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagctccttccttcgcttgtcatggtaactcttctgtcgactctgcga 26118640  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||||| |||| ||||||| | | ||||||| |||||||||||||||||| |||||||| |||||    
T  26118639 agctttcatcctttctcttatcaacctgactttctcagtagtctcatgaaccaaatccggtcccaacac 26118571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 49152416 - 49152584
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  |||| || |||||||||||||||||||||||| ||||||||||    
T  49152416 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatccttccttcgcttgtcatggtaactcttctgtcgactctgcga 49152515  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| |||||||||||| ||||| |||||||| |||||    
T  49152516 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgcaccaaatccggtcccaacac 49152584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 26288170 - 26288041
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||    
T  26288170 cacccgtcataggagtaaccctcagaaaaacatgatcaccctcctgaaa-tctagggcctttctccgcttgtcatggtaactcttatgtcgactctgcga 26288072  T
Q  120 agctttcatcttttcccttatcatcttaact 150  Q
     ||||||||||||||||||||||||||||||    
T  26288071 cgctttcatcttttcccttatcatcttaact 26288041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 1541 - 1373
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| || ||||||  ||| ||||||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||| || |||| ||    
T  1541 cacccgtcatagaagtaactttcacaaaaacatgatcaccctcctgaaactcaagggcctttctcctcttgtcatggtaactcttctgtcgaatctgtga 1442  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||||||| || |||| |||||||| ||||||||| |||||||| |||||    
T  1441 cgctttcatcttttcccttatcatcttgaccttctcagtagtctgatgaaccaaatccggtcccaacac 1373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 188
Target Start/End: Complemental strand, 14286499 - 14286342
Alignment:
Q  31 ggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatct 130  Q
    |||||||| |||| ||| ||||||||| ||||||||||||| || | ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  14286499 ggagtaactctcaaaaatacatgatcaccctcctgaaactcaagggtctttctccgcttgtcatggtaactcttctgtcgactctacgacgctttcatct 14286400  T
Q  131 tttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||||||||||| || |||| ||| |||| ||||||||| |||||||| |||||    
T  14286399 tttcccttatcatcttgaccttctcagtcgtctgatgaaccaaatccggtcccaacac 14286342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 14129999 - 14130163
Alignment:
Q  31 ggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatct 130  Q
    |||||||| || | ||| ||||||||| ||||||||||||| || ||||| |||||||| ||||||||||| |||||| |||||||||| ||||||||||    
T  14129999 ggagtaactctaaaaaatacatgatcaccctcctgaaactcaagggccttcctccgcttatcatggtaacttttctgtcgactctgcgacgctttcatct 14130098  T
Q  131 tttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
    |||||||||||||||| || |||| |||  ||||||||||||| |||||||| ||||||| ||||    
T  14130099 tttcccttatcatcttgaccttctcagtcatctcatgaaccaaatccggtcccaacaccacactc 14130163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 14264378 - 14264210
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||||||| ||||||||||    
T  14264378 cacccgtcataggagtgactctcagaaacacatgatctccctcttgaaactcaagcgccttcctacgcttgtcatggtaactcttctgtcgactctgcga 14264279  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| || ||||| ||||||| ||||||||| | |||||| |||||    
T  14264278 cgctttcatcttttcgcttatcatcttgacattcttcgtagtctgatgaaccaaatacggtcccaacac 14264210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 14433817 - 14433981
Alignment:
Q  31 ggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatct 130  Q
    |||||||| || | ||| ||||||||| ||||||||||||| || ||||| |||||||| ||||||||||| |||||| |||||||||| ||||||||||    
T  14433817 ggagtaactctaaaaaatacatgatcaccctcctgaaactcaagggccttcctccgcttatcatggtaacttttctgtcgactctgcgacgctttcatct 14433916  T
Q  131 tttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
    |||||||||||||||| || |||| |||  ||||||||||||| |||||||| ||||||| ||||    
T  14433917 tttcccttatcatcttgaccttctcagtcatctcatgaaccaaatccggtcccaacaccacactc 14433981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 12456940 - 12457069
Alignment:
Q  66 aaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtctca 165  Q
    |||||| || |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| | | | ||||||| ||||||||||    
T  12456940 aaactcaagagcctttcttcgcttgtcatggtaactcttctgtcgactctgcgaagctttcatcttttctcttatgaacctgactttctcagtagtctca 12457039  T
Q  166 tgaaccaagtccggtcctaacaccaaactc 195  Q
    ||||||||||||||||| ||||||| ||||    
T  12457040 tgaaccaagtccggtcccaacaccacactc 12457069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 16072428 - 16072260
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||||||| ||||||||||    
T  16072428 cacccgtcataggagtaactctcagaaacacatgatctccctcttgaaactcaagggccttccttcgcttgtcatggtaactcttctgtcgactctgcga 16072329  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| || ||||   |||||| | ||||||| || ||||| |||||    
T  16072328 cgctttcatcttttctcttatcatcttgaccttctccatagtctgacgaaccaaatctggtcccaacac 16072260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 18054087 - 18053919
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || |||||||| ||||||||| |||| |||||||| || ||||| ||||||||||||||||||||||||||| ||||||| ||    
T  18054087 cacccgtcatcggagtcactctcagaaatacatgatcaccctcttgaaactcaagggccttcctccgcttgtcatggtaactcttctgtcgactctgtga 18053988  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| ||||| |  |||||||| |||||||| |||||||| |||||    
T  18053987 cgctttcatcttctctctgatcatcttgactttttctgtagtctcctgaaccaaatccggtcccaacac 18053919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 182
Target Start/End: Original strand, 15340575 - 15340708
Alignment:
Q  49 acatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaa 148  Q
    ||||||||| ||||||||||||| || |||||||||||||| ||||||||||| |||||| ||||||| || |||||||||||||||||||||| ||| |    
T  15340575 acatgatcaccctcctgaaactcaagggcctttctccgcttatcatggtaacttttctgtcgactctgtgacgctttcatcttttcccttatcagcttga 15340674  T
Q  149 ctttcttagtagtctcatgaaccaagtccggtcc 182  Q
    | |||| ||| |||| ||||||||| ||||||||    
T  15340675 ccttctcagtcgtctgatgaaccaaatccggtcc 15340708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 19147326 - 19147494
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || |||||||| ||||||||  |||| |||||||| || || || || |||||||||||||||||||||||| ||||||||||    
T  19147326 cacctgtcataggagtgactctcagaaacacatgatctccctcttgaaactcaagggctttcctacgcttgtcatggtaactcttctgtcgactctgcga 19147425  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| || ||||  ||||||| ||||||||| || ||||| |||||    
T  19147426 cgctttcatcttttctcttatcatcttgaccttctccgtagtctgatgaaccaaatctggtcccaacac 19147494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 23199877 - 23199709
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || || ||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||    
T  23199877 cacccgtcatcggagtcactcttagaaatacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgtga 23199778  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| ||||| |||| ||| ||||| |  |||||||| || ||||| |||||||| |||||    
T  23199777 cgctttcatcttctccctgatcagcttgactttttctgtagtctcctggaccaaatccggtcccaacac 23199709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 23506004 - 23505836
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || || ||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||    
T  23506004 cacccgtcatcggagtcactcttagaaatacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgtga 23505905  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| ||||| |||| ||| ||||| |  |||||||| || ||||| |||||||| |||||    
T  23505904 cgctttcatcttctccctgatcagcttgactttttctgtagtctcctggaccaaatccggtcccaacac 23505836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 15102735 - 15102568
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||| ||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||| ||| ||||||||||    
T  15102735 cacccgtcataggagtaactctcaaaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttttgtcgactctgcga 15102636  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaaca 187  Q
      ||||||| ||||| ||||||||||| |||||||  ||||||| ||||| ||| |||||||| ||||    
T  15102635 cactttcattttttctcttatcatcttgactttctctgtagtctgatgaatcaaatccggtcccaaca 15102568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 20746725 - 20746893
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || |||||||| ||||||||  |||| |||||||| || || || || |||||||||||||||||||||||| ||||||||||    
T  20746725 cacctgtcataggagtgactctcagaaacacatgatctccctcttgaaactcaagggctttcctacgcttgtcatggtaactcttctgtcgactctgcga 20746824  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| || ||||  ||||||| |||||| || || ||||| |||||    
T  20746825 cgctttcatcttttctcttatcatcttgaccttctccgtagtctgatgaactaaatctggtcccaacac 20746893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 20 - 171
Target Start/End: Original strand, 13665663 - 13665814
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| |||||||| ||||| |||||||| || ||||| || ||||||| ||| |||||||||||| ||||||||||    
T  13665663 cacccgtcataggagtaactctcagaaatacatgatcttcctcttgaaactcaagggccttcctacgcttgtgatgataactcttctgtcgactctgcga 13665762  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaacc 171  Q
     ||||||||||| || || |||||||| |||||||  ||||| | |||||||    
T  13665763 cgctttcatcttctctctgatcatcttgactttctctgtagtttgatgaacc 13665814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 14954775 - 14954877
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  ||||||| ||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    |||||||||||||||| |||||    
T  14954775 tcctgaaactcaagatcctttctgcgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttctcagtag 14954874  T
Q  161 tct 163  Q
    |||    
T  14954875 tct 14954877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 11388561 - 11388433
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || ||||  || |||||||| ||||| ||||||||  |  |||| || ||||||||||| || ||||||||| ||||||||||    
T  11388561 cacctgtcataggagtgactctcaagaacacatgatc-tcctcttgaaactcatggtccttcctacgcttgtcatgatagctcttctgtcgactctgcga 11388463  T
Q  120 agctttcatcttttcccttatcatcttaac 149  Q
     |||||||||| ||| ||||||| ||||||    
T  11388462 cgctttcatctgttctcttatcaacttaac 11388433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 13968703 - 13968634
Alignment:
Q  119 aagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||||   | ||||||| ||||||||||||||| || |||||||| |||||    
T  13968703 aagctttcatcttttcccttatcaatctgactttctcagtagtctcatgaactaaatccggtcccaacac 13968634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 12687656 - 12687758
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  |||| || ||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    |||||||||||||||| |||||    
T  12687656 tcctgaaactcaagatccttcctgcgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttctcagtag 12687755  T
Q  161 tct 163  Q
    |||    
T  12687756 tct 12687758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 11553217 - 11553117
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  ||||||| ||||| ||||| |||||||| |||  ||||||||| |||||||| || ||    |||||||||||||||| |||||    
T  11553217 tcctgaaactcaagatcctttctgcgcttatcatgataactcttttgtcaactctgcgacgctttcattttctcttgaatcatcttaactttctcagtag 11553118  T
Q  161 t 161  Q
    |    
T  11553117 t 11553117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 12206877 - 12206823
Alignment:
Q  77 cctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatctt 131  Q
    ||||||| | ||||||||| |||||||| ||| |||||||||| |||||||||||    
T  12206877 cctttctacacttgtcatgataactcttttgtcgactctgcgacgctttcatctt 12206823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 15204058 - 15204107
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttc 134  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    
T  15204058 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttc 15204107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 35964962 - 35964865
Alignment:
Q  64 tgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    |||||||| ||  |||| || ||||| ||||| |||||||| |||  ||||||||| || ||||||||||| || |||| |||||| |||| ||||||    
T  35964962 tgaaactcaagatccttcctacgcttatcatgataactcttttgtctactctgcgacgccttcatcttttctctaatcaacttaaccttctcagtagt 35964865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 14037986 - 14038062
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| ||||||| || ||||||||||||||    ||||| |||||||||| ||||||    
T  14037986 cgcttatcatgataactcttttgtcgactctgtgacgctttcatcttttcttgaatcattttaactttctcagtagt 14038062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 14348016 - 14348092
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| ||||||| || ||||||||||||||    ||||| |||||||||| ||||||    
T  14348016 cgcttatcatgataactcttttgtcgactctgtgacgctttcatcttttcttgaatcattttaactttctcagtagt 14348092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 18177897 - 18177997
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | ||||| ||||| ||||| |||||||| ||| |||||||||| || ||||| || || |  ||||||| |||||||| |||||    
T  18177897 tcctgaaactcaagatcttttctacgcttatcatgataactcttttgtcgactctgcgacgccttcattttctctcgaatcatctaaactttctcagtag 18177996  T
Q  161 t 161  Q
    |    
T  18177997 t 18177997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 42939 - 43114
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||    
T  42939 cacccgtcataggagtgaccctaagaaaaacatgatcaccctcctgaaactctagggactttctccgcttgtcatggtaactattctgtcgactctgcga 43038  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
     |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  43039 cgctttcatcttttcccttatcatcttgactttcttagtagtctcatgaaccaagtccggtcccaacaccacactc 43114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 6e-64; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 33223043 - 33223218
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||| ||||||||||    
T  33223043 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagttcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 33223142  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| |||||||||||||| ||||| ||||||| ||||    
T  33223143 agctttcatcttttcccttatcaacttgactttctcagtagtttcatgaaccaagtctggtcccaacaccacactc 33223218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 44662013 - 44661845
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||||||| ||||||||||    
T  44662013 cacccgtcaaaggagtaaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttctccgcttgtcacggtaactcttctgtcgactctgcga 44661914  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| ||||||||||||||||||||||||||| |||||    
T  44661913 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgaaccaagtccggtcccaacac 44661845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 20891107 - 20891275
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||    
T  20891107 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagagcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 20891206  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||| | | ||||||| |||||||||||||||||| | |||||| |||||    
T  20891207 agctttcatcttttcccttatcaacctgactttctcagtagtctcatgaaccaaattcggtcccaacac 20891275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 3264941 - 3264773
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  3264941 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 3264842  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| |||||||||||||||||| |||||||| |||||    
T  3264841 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgaaccaaatccggtcccaacac 3264773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 11207378 - 11207210
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| || |||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  11207378 cacccgtcaaaggagtgactctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 11207279  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| ||||||||||||||||||||||||||| |||||    
T  11207278 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgaaccaagtccggtcccaacac 11207210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 29453684 - 29453522
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  29453684 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 29453585  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
    ||||||||||||||| ||||||| | | ||||||| |||||||||||||||||| ||| ||||    
T  29453584 agctttcatcttttctcttatcaaccttactttctcagtagtctcatgaaccaaatcccgtcc 29453522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 16146037 - 16146205
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||||| ||||||||||    
T  16146037 cacccgtcataggagtaactctcagaaatacatgatcatcctcctgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgactctgcga 16146136  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||| ||| |||||||  ||||||| ||||||||| || ||||| |||||    
T  16146137 cgctttcatcttttcccttatcaccttgactttctccgtagtctgatgaaccaaatctggtcccaacac 16146205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 195
Target Start/End: Complemental strand, 1649424 - 1649249
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| || ||||| ||||||||  ||||||||||||| ||  |||| ||||||||||| ||||||||||| ||| ||||||||||    
T  1649424 cacccgtcataggagtaactcttagaaatacatgatcgccctcctgaaactcaaggtccttcctccgcttgtcgtggtaactcttatgtcgactctgcga 1649325  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
     |||||||||||||| || || ||||| |||||||| ||||||||||||||||| |||||||| ||||||| ||||    
T  1649324 cgctttcatcttttctctgattatcttgactttcttcgtagtctcatgaaccaaatccggtcccaacaccacactc 1649249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 16752718 - 16752871
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  |||||||| |||| ||| ||||||||| ||||||||||||| || |||||||||||||| ||||||||||| |||||| ||||||||||    
T  16752718 cacccgtcatcggagtaactctcaaaaatacatgatcaccctcctgaaactcaagggcctttctccgcttatcatggtaacttttctgtcgactctgcga 16752817  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaa 173  Q
     |||||||||||||||||||||||||| || |||| ||| || | |||||||||    
T  16752818 cgctttcatcttttcccttatcatcttgaccttctcagtcgtttgatgaaccaa 16752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 15070538 - 15070706
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || |||||||| ||||||||  |||| |||||||| || |||||||| |||||||||||||||||||||||| ||||||||||    
T  15070538 cacccgtcataggagtgactctcagaaacacatgatctccctcttgaaactcaagggcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 15070637  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| || ||||  ||||||| |||||| || || ||||| |||||    
T  15070638 cgctttcatcttttctcttatcatcttgaccttctccgtagtctgatgaactaaatctggtcccaacac 15070706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 15246049 - 15246217
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||| ||||| |||||||| ||||||||  ||||||||||||| |  ||||| || || ||||||||||||||||| ||| ||||||||||    
T  15246049 cacccgtcataggggtaactctcagaaatacatgatctccctcctgaaactcaaaggccttcctacgtttgtcatggtaactcttttgtcgactctgcga 15246148  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| || ||||| ||||||| ||||||||| |||||||| |||||    
T  15246149 cgctttcatcttttctcttatcatctttaccttcttcgtagtctgatgaaccaaatccggtcccaacac 15246217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 15359237 - 15359069
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| ||| |||| ||||||||  |||| |||||||| || |||||||| |||||||||||  ||||||||||| ||||||||||    
T  15359237 cacccgtcataggagtaactctcggaaatacatgatctccctcttgaaactcaagggcctttctacgcttgtcatgaaaactcttctgtcgactctgcga 15359138  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| || ||||  ||||||| ||||||||| |||||||| |||||    
T  15359137 cgctttcatcttttctcttatcatctttaccttctccgtagtctgatgaaccaaatccggtcccaacac 15359069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 27900515 - 27900679
Alignment:
Q  24 cgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagct 123  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||| ||  | || || ||||||||||| || ||||||| | |||||||||| |||    
T  27900515 cgtcataggagtaaccctcagaaaaacatgatcaccctcctgaaactcaaggtctttcctacgcttgtcatgatagctcttctatcgactctgcgacgct 27900614  T
Q  124 ttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||| || || |||||||| |||||||  ||||||||||||||||| |||||||| |||||    
T  27900615 ttcatcttctctctgatcatcttgactttctctgtagtctcatgaaccaaatccggtcccaacac 27900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 15003511 - 15003341
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| ||||||||| |||| ||| ||||||||  |||| |||||||| || |  ||||| |||||||||||||||||||| ||| ||||||||||    
T  15003511 cacctgtcataggagtaactctcaaaaacacatgatctccctcttgaaactcaagggattttctacgcttgtcatggtaactcttttgtcgactctgcga 15003412  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| |||||| || || ||||| |||||||    
T  15003411 cgctttcatcttttctcttatcatcttgactttctccgtagtctgatgaactaaatctggtcccaacacca 15003341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 51606328 - 51606166
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || || | ||| ||||||||| |||| |||||||| || ||||||||||| ||||||||||||||||||||| ||||||| ||    
T  51606328 cacccgtcatcggagtcactcttataaatacatgatcaccctcttgaaactcaagggcctttctccgtttgtcatggtaactcttctgtcgactctgtga 51606229  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     ||||||||||| || || |||||||| ||||| |  |||||||| |||||||| ||||||||    
T  51606228 cgctttcatcttctctctgatcatcttgactttttctgtagtctcctgaaccaaatccggtcc 51606166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 15077825 - 15077928
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtccta 184  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| || ||||  ||||||| |||||| || || ||||| |    
T  15077825 cgcttgtcatggtaactcttctgtcgactctgcgacgctttcatcttttctcttatcatcttgaccttctccgtagtctgatgaactaaatctggtccca 15077924  T
Q  185 acac 188  Q
    ||||    
T  15077925 acac 15077928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 18227292 - 18227190
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||   ||| || ||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    ||||||||||||||||||||||    
T  18227292 tcctgaaactcaagattcttcctgcgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttcttagtag 18227193  T
Q  161 tct 163  Q
    |||    
T  18227192 tct 18227190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 15415108 - 15415051
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatca 142  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||| ||||||||||    
T  15415108 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttctcccttatca 15415051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 14652498 - 14652574
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    ||||||||||| |||| ||||||    
T  14652498 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttcttgaatcatcttaaccttctcagtagt 14652574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 8706108 - 8706175
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaacttt 152  Q
    |||||||| || |||||||| ||| || ||||||| |||||||||||||| ||||| | |||||||||    
T  8706108 cgcttgtcgtgataactcttgtgtcgattctgcgacgctttcatcttttctcttattagcttaacttt 8706175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 7090616 - 7090698
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||||||||| ||| |||||| ||| ||||||||||| ||    ||||||||||| |||| ||||||    
T  7090616 tttctacgcttatcatggtaactcttttgtcgactcttcgacgctttcatcttctcttgaatcatcttaaccttctcagtagt 7090698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 14680733 - 14680835
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  |||| || ||||| ||||| |||||||| ||| ||||||||||  ||||||| || ||    |||||||||||||||| |||||    
T  14680733 tcctgaaactcaagatccttcctgcgcttatcatgataactcttttgtcgactctgcgacactttcattttctcttgaatcatcttaactttctcagtag 14680832  T
Q  161 tct 163  Q
    |||    
T  14680833 tct 14680835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 15149828 - 15149750
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||| ||    |||||||||||||||| | ||||||    
T  15149828 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttctcttgaatcatcttaactttctcaatagtct 15149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 14159628 - 14159728
Alignment:
Q  31 ggagtaaccctcagaaaaacatgatcatcctcct-gaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatc 129  Q
    |||||||| ||||| || |||||||| ||||||| |||| || ||  | ||||| ||||| ||||| |||||||| ||| |||||||||| |||||||||    
T  14159628 ggagtaactctcaggaacacatgatc-tcctccttgaaattcaagatcttttctacgcttatcatgataactcttatgtcgactctgcgacgctttcatc 14159726  T
Q  130 tt 131  Q
    ||    
T  14159727 tt 14159728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 14851188 - 14851119
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttct 154  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||| ||   |||||||||||| ||||    
T  14851188 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttctcttgtatcatcttaaccttct 14851119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 42703028 - 42703105
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggt 97  Q
    |||||||||  ||||| || || | ||| ||||||||| |||| |||||||| || ||||||||||| ||||||||||    
T  42703028 cacccgtcatcggagtcactcttataaatacatgatcaccctcttgaaactcaagggcctttctccgtttgtcatggt 42703105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 14266745 - 14266645
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | ||||| ||||| ||||| |||||||| ||| |||||||||| |||||||| || || |  ||||||| ||| |||| |||||    
T  14266745 tcctgaaactcaagatcttttctacgcttatcatgataactcttttgtcgactctgcgacgctttcattttctctcagatcatctgaaccttctcagtag 14266646  T
Q  161 t 161  Q
    |    
T  14266645 t 14266645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 16676547 - 16676447
Alignment:
Q  63 ctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtc 162  Q
    ||||||||| ||  |||| || ||||| ||||| |||||||| ||| ||||||||||  ||||||| || ||    |||||||||||||||| |||||||    
T  16676547 ctgaaactcaagatccttcctgcgcttatcatgataactcttttgtcgactctgcgacactttcattttctcttaaatcatcttaactttctcagtagtc 16676448  T
Q  163 t 163  Q
    |    
T  16676447 t 16676447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 3e-62; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 12304949 - 12305117
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||    
T  12304949 cacccgtcaaaggagtgaccctaagaaaaacatgatcaccctcctgaaactcaagagcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 12305048  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||| | | ||||||| ||||||||||||||||||||||||||| |||||    
T  12305049 agctttcatcttttcccttatcaacctgactttctcagtagtctcatgaaccaagtccggtcccaacac 12305117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 804263 - 804095
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| ||||||||||||||||| |||||| ||||||||||    
T  804263 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactccagatcctttcttcgcttgtcatggtaacttttctgtcgactctgcga 804164  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||| | | ||||||||||||||||| |||||||| |||||||| |||||    
T  804163 agctttcatcttttcccttatcaacctgactttcttagtagtctcgtgaaccaaatccggtcccaacac 804095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 6603849 - 6604017
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  6603849 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 6603948  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| |||||||||||||||||| |||||||| |||||    
T  6603949 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgaaccaaatccggtcccaacac 6604017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 6679302 - 6679470
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  6679302 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 6679401  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| |||||||||||||||||| |||||||| |||||    
T  6679402 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgaaccaaatccggtcccaacac 6679470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 14565333 - 14565501
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| ||||||||||||||||| |||||| ||||||||||    
T  14565333 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactccagatcctttcttcgcttgtcatggtaacttttctgtcgactctgcga 14565432  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||| | | ||||||| ||||||||| |||||||| |||||||| |||||    
T  14565433 agctttcatcttttcccttatcaacctgactttctcagtagtctcgtgaaccaaatccggtcccaacac 14565501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 22062023 - 22061855
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  22062023 cacccgtcataggagtaaccctcagaaacacatgatcaccctcctgaaactcaagagcctttctccgcttgtcatggtaactcttctgtcgactctgcga 22061924  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||  || |||||||| |||||||  ||||||||||||||||| |||||||| |||||    
T  22061923 cgctttcatcttttttctgatcatcttgactttctctgtagtctcatgaaccaaatccggtcccaacac 22061855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 29304016 - 29303848
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| ||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||||| ||| ||||||||||    
T  29304016 cacccgtcattggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagagcctttcttcgcttgtcatggtaactcttttgtcgactctgcga 29303917  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||||  | ||||||| |||||||||||||||||| |||||||| |||||    
T  29303916 agctttcatcttttcccttatcattctgactttctcagtagtctcatgaaccaaatccggtcccaacac 29303848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 21324999 - 21324829
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| || |||||||| ||||||||||| |||||||| ||| ||||||||||    
T  21324999 cacccgtcataggagtaaccctcagaaatacatgatcaccctcctgaaactcaagggcctttctacgcttgtcatgataactcttttgtcgactctgcga 21324900  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
     | |||||||||||| ||||||||||| |||||||  ||||||| ||||||||| |||||||| |||||||    
T  21324899 cgttttcatcttttctcttatcatcttgactttctctgtagtctgatgaaccaaatccggtcccaacacca 21324829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 31417064 - 31416896
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| | ||||||| |||||||||||||||||| ||||||||||||| || |||||| ||||||| |||||||||||||||||| ||||||||||    
T  31417064 cacccgtcataagagtaactctcagaaaaacatgatcaccctcctgaaactcaagggcctttatccgcttatcatggtaactcttctgtcgactctgcga 31416965  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||| |||||||||||||||||| ||||||| |||||||| ||| || || |||||||| |||||    
T  31416964 cgctttcaccttttcccttatcatcttgactttctcagtagtctgatgcactaaatccggtcccaacac 31416896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 1266430 - 1266597
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  |||||||| |||||||| ||||||||| ||||||||||||| || ||||||||||||||||| || |||||||| ||| ||||||||||    
T  1266430 cacccgtcatcggagtaactctcagaaatacatgatcaccctcctgaaactcaagggcctttctccgcttgtcgtgataactcttttgtcgactctgcga 1266529  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||||||| || |||| ||| |||| ||||||||| |||||||| |||||    
T  1266530 cgctttcatcttttcccttatcatctt-accttctcagtcgtctgatgaaccaaatccggtcccaacac 1266597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 23655118 - 23655286
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| | ||||||  | || |||||||| || ||||||||||||||||||||||||||||||| | ||||||||||    
T  23655118 cacccgtcataggagtaactctcagaaacaaatgatctccgtcttgaaactcaagggcctttctccgcttgtcatggtaactcttctatcgactctgcga 23655217  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| || ||||  ||||||| ||||||||| |||||||| |||||    
T  23655218 cgctttcatcttttctcttatcatcttgaccttctccgtagtctgatgaaccaaatccggtcccaacac 23655286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 21682060 - 21681892
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || ||||| || ||||||||||| |||||||||||| |||||| |||    
T  21682060 cacccgtcataggagtaactctcagaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgactctacga 21681961  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| || ||||| |||||    
T  21681960 cgctttcatcttttctcttatcatcttgactttctccgtagtctgatgaaccaaatctggtcccaacac 21681892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 31571432 - 31571270
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || |||||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||    
T  31571432 cacccgtcatcggagtcactctcagaaatacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgtga 31571333  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     ||||||||||| || || |||||||| ||||| |  |||||||| |||||||| ||||||||    
T  31571332 cgctttcatcttctctctgatcatcttgactttttctgtagtctcctgaaccaaatccggtcc 31571270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 20008041 - 20008211
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| || ||||| || ||||| || |||||||||||||||||||| ||| |||| |||||    
T  20008041 cacccgtcataggagtaactctcagaaacacatgatctccctcttggaactcaagggccttcctacgcttgtcatggtaactcttttgtcgactatgcga 20008140  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
     |||||||||||||| ||||||||||| || ||||  ||||||| ||||||||| || ||||| |||||||    
T  20008141 cgctttcatcttttctcttatcatctttaccttctccgtagtctgatgaaccaaatctggtcccaacacca 20008211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 19851605 - 19851772
Alignment:
Q  23 ccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagc 122  Q
    ||||||| ||||| || |||||||| ||||||||  |||| |||||||| || |||||||| |||||| ||||||||||||||||| |||||||||| ||    
T  19851605 ccgtcaacggagtgactctcagaaacacatgatctccctcttgaaactcaagggcctttctacgcttgccatggtaactcttctgtcgactctgcgacgc 19851704  T
Q  123 tttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
    |||||| ||||| ||||||||||| || ||||  ||||||| |||||| || || ||||| |||||||    
T  19851705 tttcatattttctcttatcatcttgaccttctatgtagtctaatgaactaaatctggtcccaacacca 19851772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 19857641 - 19857808
Alignment:
Q  23 ccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagc 122  Q
    ||||||| ||||| || |||||||| ||||||||  |||| |||||||| || |||||||| |||||| ||||||||||||||||| |||||||||| ||    
T  19857641 ccgtcaacggagtgactctcagaaacacatgatctccctcttgaaactcaagggcctttctacgcttgccatggtaactcttctgtcgactctgcgacgc 19857740  T
Q  123 tttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
    |||||| ||||| ||||||||||| || ||||  ||||||| |||||| || || ||||| |||||||    
T  19857741 tttcatattttctcttatcatcttgaccttctatgtagtctaatgaactaaatctggtcccaacacca 19857808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 21840618 - 21840778
Alignment:
Q  30 aggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatc 129  Q
    ||||||||| || ||||| ||||||||  |||| |||||||| |||||||| || ||||||||||||||||| |||||| |||||||||| ||||| |||    
T  21840618 aggagtaactcttagaaacacatgatctccctcttgaaactcaagtgccttccttcgcttgtcatggtaactattctgtcgactctgcgacgcttttatc 21840717  T
Q  130 ttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
    ||||| ||||||||||| || ||||  ||||||| |||||| || || ||||| |||||||    
T  21840718 ttttctcttatcatcttgaccttctccgtagtctgatgaactaaatctggtcccaacacca 21840778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 22051054 - 22051222
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||||||  ||| ||| ||||||||| |||| |||||||| || ||||| |||||||| ||||||||||| |||||| ||||||||||    
T  22051054 cacccgtcatcggagtaactttcaaaaatacatgatcaccctcttgaaactcaagggccttcctccgcttatcatggtaacttttctgtcgactctgcga 22051153  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||||||| || ||||  || ||||  |||||||| || ||||| |||||    
T  22051154 cgctttcatcttttcccttatcatcttgaccttctctgtcgtctgttgaaccaaatctggtcccaacac 22051222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 20010490 - 20010365
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || |||||||| ||||||||  |||| |||||||| || |||||  | |||||||||||||||||||||||| ||||||||||    
T  20010490 cacccgtcatcggagtgactctcagaaacacatgatctccctcttgaaactcaagcgccttcttacgcttgtcatggtaactcttctgtcgactctgcga 20010391  T
Q  120 agctttcatcttttcccttatcatct 145  Q
     |||||||||||||| ||||||||||    
T  20010390 cgctttcatcttttctcttatcatct 20010365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 16271738 - 16271646
Alignment:
Q  96 gtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| | | || |||| ||||||||||||||||||||||||||| |||||    
T  16271738 gtaactcctctgtcgactctgcgaagctttcatcttttcccttatcaacctgaccttctcagtagtctcatgaaccaagtccggtcccaacac 16271646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 28982548 - 28982635
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctg 107  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||    
T  28982548 cacccgtcaacggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctg 28982635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 28987768 - 28987855
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctg 107  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||    
T  28987768 cacccgtcaacggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctg 28987855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 16265208 - 16265127
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaact 101  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||    
T  16265208 cacccgtcaaaggagtgaccctcagaaagacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaact 16265127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 19978202 - 19978301
Alignment:
Q  64 tgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    |||||||| ||  ||||||| ||||| ||||| |||||||| ||| |||||||||| ||||||||||| ||    |||||||||||||||| ||||||||    
T  19978202 tgaaactcaagatcctttctacgcttatcatgataactcttttgtcgactctgcgacgctttcatcttctcttgaatcatcttaactttctcagtagtct 19978301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 15533636 - 15533714
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| |||||||||||| |||||||||| ||||||||||| ||   |||||| |||||||||| ||||||||    
T  15533636 cgcttatcatgataactcttctgtcgactctgcgacgctttcatcttctcttgtatcattttaactttctcagtagtct 15533714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 23949176 - 23949252
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    |||||||||||||||| ||||||    
T  23949176 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttcttggatcatcttaactttctcagtagt 23949252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 20388334 - 20388412
Alignment:
Q  64 tgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatca 142  Q
    |||||||| ||  ||||||| ||||||||||| |||||||| ||| |||||| ||| ||||||||||| || |||||||    
T  20388334 tgaaactcaaggtcctttctacgcttgtcatgataactcttatgtcgactctacgacgctttcatcttctctcttatca 20388412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 32600376 - 32600478
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  |||| || ||||| ||||| |||||||||||| |||||||||| |||||||| || ||    ||||||||||| |||| |||||    
T  32600376 tcctgaaactcaagatccttcctgcgcttatcatgataactcttctgtcgactctgcgacgctttcattttctcttgaatcatcttaaccttctcagtag 32600475  T
Q  161 tct 163  Q
    |||    
T  32600476 tct 32600478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 20396674 - 20396574
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | ||||| ||||| ||||| |||| ||| ||| |||||||||| |||||||||||||| |  |||| |||||| |||| |||||    
T  20396674 tcctgaaactcaaggtcttttctacgcttatcatgataacacttttgtcgactctgcgacgctttcatcttttctcgcatcaacttaaccttctcagtag 20396575  T
Q  161 t 161  Q
    |    
T  20396574 t 20396574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 20652879 - 20652756
Alignment:
Q  64 tgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||||||||   ||||||||| ||| | ||| ||||||||||||  |||||| || ||||||||||| ||    ||||||||||| ||||  |||||||    
T  20652879 tgaaactctatatcctttctcctcttataatgataactcttctgtccactctgagacgctttcatcttctcttggatcatcttaaccttctccgtagtct 20652780  T
Q  164 catgaaccaagtccggtcctaaca 187  Q
    | || ||||  |||||||||||||    
T  20652779 cttgcaccacctccggtcctaaca 20652756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 22378032 - 22377929
Alignment:
Q  31 ggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatct 130  Q
    ||||| ||||||| ||| ||||||||  | ||||||||||| |   | || || ||||| ||||| |||||||| ||| |||||||||| ||||||||||    
T  22378032 ggagtgaccctcaaaaatacatgatctgcttcctgaaactcaatatctttcctacgcttatcatgataactcttttgtcgactctgcgacgctttcatct 22377933  T
Q  131 tttc 134  Q
    ||||    
T  22377932 tttc 22377929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 22384207 - 22384104
Alignment:
Q  31 ggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatct 130  Q
    ||||| ||||||| ||| ||||||||  | ||||||||||| |   | || || ||||| ||||| |||||||| ||| |||||||||| ||||||||||    
T  22384207 ggagtgaccctcaaaaatacatgatctgcttcctgaaactcaatatctttcctacgcttatcatgataactcttttgtcgactctgcgacgctttcatct 22384108  T
Q  131 tttc 134  Q
    ||||    
T  22384107 tttc 22384104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 23650291 - 23650373
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||||||||| ||| |||||||||| ||||| ||||| ||    ||||||||||| |||| ||||||    
T  23650291 tttctacgcttatcatggtaactcttttgtcgactctgcgatgcttttatcttctcttgaatcatcttaaccttctcagtagt 23650373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 190
Target Start/End: Complemental strand, 16408570 - 16408465
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtccta 184  Q
    ||||| ||||| |||||||| ||| ||||||||||  ||||||| || ||    |||||||||||||||| ||||||||  ||||| |  ||||||||||    
T  16408570 cgcttatcatgataactcttttgtcgactctgcgacactttcattttctcttgaatcatcttaactttctcagtagtctgctgaacaatctccggtccta 16408471  T
Q  185 acacca 190  Q
    | ||||    
T  16408470 agacca 16408465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 21167068 - 21167016
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatctt 131  Q
    ||||| ||||| ||||| |||||||| ||| |||||||||| |||||||||||    
T  21167068 tttctacgcttatcatgataactcttttgtcgactctgcgacgctttcatctt 21167016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 3e-62; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 24364401 - 24364569
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||    
T  24364401 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttctccgcttgtcatggtaactcttctgtcgactctgcga 24364500  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| ||||||||||||||||||||||||||| |||||    
T  24364501 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgaaccaagtccggtcccaacac 24364569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 10469141 - 10468973
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  10469141 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 10469042  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| |||||||||||||||||| |||||||| |||||    
T  10469041 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgaaccaaatccggtcccaacac 10468973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 14381759 - 14381591
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||| || ||||||||||||  |||||||||    
T  14381759 cacccgtcataggagtaaccctcagaaatacatgatcaccctcctgaaactcaagggcctttctccgcttgtcgtgataactcttctgtccactctgcga 14381660  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| |||| ||| |||||    
T  14381659 cgctttcatcttttctcttatcatcttgactttctctgtagtctgatgaaccaaatccgatcccaacac 14381591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 8766427 - 8766278
Alignment:
Q  33 agtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttt 132  Q
    ||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||| ||| || |||||||||    
T  8766427 agtaaccctcagaaacacatgatcaccctcctgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctacgacgccttcatcttt 8766328  T
Q  133 tcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
    || || |||||||| |||||||  ||||||||||||||||| ||||||||    
T  8766327 tctctgatcatcttgactttctctgtagtctcatgaaccaaatccggtcc 8766278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 17415475 - 17415643
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||| ||| ||||||||  |||| |||||||| || |||||||| |||||| ||||||||||||||||| |||||| |||    
T  17415475 cacccgtcataggagtaactctcataaacacatgatctccctcttgaaactcaagggcctttctacgcttgccatggtaactcttctgtcgactctacga 17415574  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||||||| |||||||  ||||||| ||||||||| |||||||| |||||    
T  17415575 cgctttcatcttttcccttatcatcttgactttctctgtagtctgatgaaccaaatccggtcccaacac 17415643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 22796924 - 22796763
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||| ||| |||| |||||    
T  22796924 cacccgtcataggagtaactctcagaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttatgtagactttgcga 22796825  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtc 181  Q
     ||||||||||||||||||||||||||||| ||||  ||||||| ||||||||| |||||||    
T  22796824 cgctttcatcttttcccttatcatcttaaccttctctgtagtctgatgaaccaaatccggtc 22796763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 18800931 - 18801099
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||| ||| ||||||||||    
T  18800931 cacccgtcataggagtaactctcagaaatacatgatccccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttttgtcgactctgcga 18801030  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| || |||||||| |||||||  ||||||| ||||||||| |||||||| |||||    
T  18801031 cgctttcatcttttctctaatcatcttgactttctccgtagtctgatgaaccaaatccggtcccaacac 18801099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 27560909 - 27560741
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  |||||||| || ||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  27560909 cacccgtcatcggagtaactcttagaaatacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 27560810  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| ||||| |||||||| ||||| |  |||||||| ||||| || |||||||| |||||    
T  27560809 cgctttcatcttctccctgatcatcttgactttttctgtagtctcctgaactaaatccggtcccaacac 27560741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 28283105 - 28282943
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || || ||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||    
T  28283105 cacccgtcatcggagtcactcttagaaatacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgtga 28283006  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     ||||||||||| || || |||||||| ||||| |  |||||||| |||||||| ||||||||    
T  28283005 cgctttcatcttctctctgatcatcttgactttttctgtagtctcctgaaccaaatccggtcc 28282943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 22 - 188
Target Start/End: Original strand, 21471592 - 21471758
Alignment:
Q  22 cccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaag 121  Q
    ||||||| |||||| || |||||||| ||||||||  | || |||||||| ||  ||||||| |||||||||||||||||||||||| |||||||||| |    
T  21471592 cccgtcataggagtgactctcagaaacacatgatctccttcttgaaactcaagatcctttctacgcttgtcatggtaactcttctgtcgactctgcgacg 21471691  T
Q  122 ctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||| ||||| | ||| || ||||  ||||||| ||||||||| |||||||| |||||    
T  21471692 ctttcatcttttctcttattaacttgaccttctccgtagtctgatgaaccaaatccggtcccaacac 21471758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 15459325 - 15459493
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||||||||||||||||||||| ||| | ||||||||||| ||  | || || |||||||||||||| ||||| ||| ||||||||||    
T  15459325 cacctgtcataggagtaaccctcagaaaaacatggtcaccttcctgaaactcaagatctttcctacgcttgtcatggtagctcttttgtcgactctgcga 15459424  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||| | |||||||  |||||||| |||||||| |||||||| |||||    
T  15459425 cgctttcatcttctctctaatcatcctgactttctccgtagtctcgtgaaccaaatccggtcccaacac 15459493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 25768180 - 25768342
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| | |||| || |||||||| ||||||||  | || |||||||| ||  |||| || |||||||||||||||||||||||| ||||||||||    
T  25768180 cacccgtcataagagtgactctcagaaacacatgatctccttcttgaaactcaagatccttcctacgcttgtcatggtaactcttctgtcgactctgcga 25768279  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     |||||||||||||| ||||||| ||| || ||||  ||||| | |||||| || ||||||||    
T  25768280 cgctttcatcttttctcttatcaacttgaccttctccgtagtttgatgaactaaatccggtcc 25768342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 25750798 - 25750897
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| | |||| || |||||||| ||||||||  | || |||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  25750798 cacccgtcacaagagtgactctcagaaacacatgatctccttcttgaaactcaagatcctttctacgcttgtcatggtaactcttctgtcgactctgcga 25750897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 14131471 - 14131361
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| ||||||||||| ||||||||  | ||||||||||| ||  |||| || ||||||||||| || ||||| ||| ||||||||||    
T  14131471 cacctgtcataggagtgaccctcagaaacacatgatctccttcctgaaactccaggtccttcctacgcttgtcatgatagctcttttgtcgactctgcga 14131372  T
Q  120 agctttcatct 130  Q
     ||||||||||    
T  14131371 cgctttcatct 14131361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 34645878 - 34645749
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| |||||||  || ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||    
T  34645878 cacctgtcataggagtgaccctcaagaacacatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcga 34645779  T
Q  120 agctttcatcttttcccttatcatcttaac 149  Q
     |||||||| | ||| ||||||| ||||||    
T  34645778 cgctttcatatgttctcttatcaacttaac 34645749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 25750935 - 25751023
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgt 108  Q
    ||||||||| |||||| || |||||||| ||||||||  | || |||||||| ||  ||||||| ||||||||||||||||||||||||    
T  25750935 cacccgtcacaggagtgactctcagaaacacatgatctccttcttgaaactcaagatcctttctacgcttgtcatggtaactcttctgt 25751023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 1640818 - 1640883
Alignment:
Q  77 cctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatca 142  Q
    ||||||| ||||||||||| |||||||||||| ||||||| || ||||||||||| || |||||||    
T  1640818 cctttctacgcttgtcatgataactcttctgtcgactctgtgacgctttcatcttctctcttatca 1640883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 21564424 - 21564295
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| ||||||||||| || ||||  || ||||||||  |||| |||||||| ||  |||| || || |||||||| || ||||||||| |||||| |||    
T  21564424 cacctgtcaaaggagtgactctcaagaacacatgatctccctcttgaaactcaaggtccttcctacgtttgtcatgatagctcttctgtcgactctacga 21564325  T
Q  120 agctttcatcttttcccttatcatcttaac 149  Q
     |||||||||| ||| ||||||| ||||||    
T  21564324 cgctttcatctgttctcttatcaacttaac 21564295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 27331666 - 27331584
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||||||||| |||  ||||||||| ||||||||||||||    ||||| |||||||||| ||||||    
T  27331666 tttctacgcttatcatggtaactcttttgtcaactctgcgacgctttcatcttttcttgaatcattttaactttctcagtagt 27331584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 27392406 - 27392324
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||||||||| |||  ||||||||| ||||||||||||||    ||||| |||||||||| ||||||    
T  27392406 tttctacgcttatcatggtaactcttttgtcaactctgcgacgctttcatcttttcttgaatcattttaactttctcagtagt 27392324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 11287890 - 11287761
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||| || || ||||  || ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||    
T  11287890 cacccgtcataggggtgactctcaagaacacatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcga 11287791  T
Q  120 agctttcatcttttcccttatcatcttaac 149  Q
     |||||||| | ||| ||||| | ||||||    
T  11287790 cgctttcatatgttctcttattaacttaac 11287761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 19453511 - 19453584
Alignment:
Q  122 ctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
    |||||||||| || || ||||||||||||||||  ||||||| ||||||||| || ||||| ||||||| ||||    
T  19453511 ctttcatcttctctctgatcatcttaactttctctgtagtctgatgaaccaaatctggtcccaacaccacactc 19453584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 23078458 - 23078599
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || |||| ||| || |||||  |||| |||||||| ||  | || || ||||| ||||| |||||||| ||| || |||||||    
T  23078458 caccagtcacaggagtgactctcaaaaatacgtgatctccctcttgaaactcaaggtctttcctacgcttatcatgataactcttttgtcgagtctgcga 23078557  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
     ||||||||||||||    |||||||||||||||| ||||||    
T  23078558 tgctttcatcttttcttgaatcatcttaactttctcagtagt 23078599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 1543335 - 1543235
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | ||||| ||||| |||||||||||||| ||| ||||||| || |||||||| || ||    |||||||||||||||| |||||    
T  1543335 tcctgaaactcaagatcttttctgcgcttatcatggtaactcttttgtcgactctgggacgctttcattttctcttgaatcatcttaactttctcagtag 1543236  T
Q  161 t 161  Q
    |    
T  1543235 t 1543235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 11280768 - 11280668
Alignment:
Q  49 acatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaa 148  Q
    ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| |||||||||| |||||||| | ||| ||||| | |||||    
T  11280768 acatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcgacgctttcatatgttctcttattaacttaa 11280669  T
Q  149 c 149  Q
    |    
T  11280668 c 11280668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 19879316 - 19879416
Alignment:
Q  49 acatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaa 148  Q
    ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||  ||||||||| ||| ||||| | |||||    
T  19879316 acatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcgaccctttcatctgttctcttattaacttaa 19879415  T
Q  149 c 149  Q
    |    
T  19879416 c 19879416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 22433929 - 22434001
Alignment:
Q  91 tcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| |||||||| ||| |||||||||| ||||||||||| ||    |||||||||||||||| ||||||||    
T  22433929 tcatgataactcttttgtcgactctgcgacgctttcatcttctcttgaatcatcttaactttctcagtagtct 22434001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 16963594 - 16963516
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    |||||||| |||||||  |||||||    
T  16963594 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttcttgaatcatctttactttctctgtagtct 16963516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 12498056 - 12498156
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | || || ||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    |||||||||||||||| |||||    
T  12498056 tcctgaaactcaagatctttcctgcgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttctcagtag 12498155  T
Q  161 t 161  Q
    |    
T  12498156 t 12498156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 12510845 - 12510745
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | || || ||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    |||||||||||||||| |||||    
T  12510845 tcctgaaactcaagatctttcctgcgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttctcagtag 12510746  T
Q  161 t 161  Q
    |    
T  12510745 t 12510745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 19864747 - 19864819
Alignment:
Q  91 tcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| |||||||| ||| |||||||||| ||||||||||| ||    ||||||||||| |||| ||||||||    
T  19864747 tcatgataactcttttgtcgactctgcgacgctttcatcttctcttgaatcatcttaaccttctcagtagtct 19864819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 25765523 - 25765439
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| ||||| |||||||||||| |||||| ||| |||||||| || ||    |||||||| ||||||| ||||||||    
T  25765523 tttctacgcttatcatgataactcttctgtcgactctacgacgctttcattttctcttgaatcatctttactttctcagtagtct 25765439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 117; Significance: 8e-60; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 26417 - 26585
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| || |||||||| | |||||||||||||||||||||| ||||||||||    
T  26417 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagagcctttcttcacttgtcatggtaactcttctgtcgactctgcga 26516  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||||||| || ||||| |||||    
T  26517 agctttcatcttttcccttatcaacctaactttctcagtagtctcatgaaccaaatctggtcccaacac 26585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 8e-60; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 22502718 - 22502886
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||||||||| |||||| |||    
T  22502718 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagagcctttcttcgcttgtcatggtaactcttctgtcgactctacga 22502817  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||| | | ||||||| ||||||||||||||||||||| ||||| |||||    
T  22502818 agctttcatcttttcccttatcaacctgactttctcagtagtctcatgaaccaagtctggtcccaacac 22502886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 20 - 195
Target Start/End: Complemental strand, 23080418 - 23080243
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| |||||||||||| || |||||||    
T  23080418 cacccgtcataggagtgaccctcagaaaaacatgatcaccctcctgaaactatagggcctttctccgcttgtcatgataactcttctgtcgaatctgcga 23080319  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
     |||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||| ||||    
T  23080318 cgctttcatcttttcccttatcatcttgactttctcagtagtctcatgcaccaagtctggtcccaacaccacactc 23080243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 22381238 - 22381406
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| ||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||    
T  22381238 cacccgtcatcggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagagcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 22381337  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||||||||||||||||||| || || |||| |||||||||||||||||| |||||||| |||||    
T  22381338 agctttcatcttttcccttatcattttgaccttctcagtagtctcatgaaccaaatccggtcccaacac 22381406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 14887320 - 14887152
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  14887320 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 14887221  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| |||||||||||| ||||| |||||||| |||||    
T  14887220 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgcaccaaatccggtcccaacac 14887152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 25848114 - 25848282
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| || |||| ||||||||||||| ||||||||||||| ||  ||||| |||||||||||||||||||||||||| ||||||||||    
T  25848114 cacccgtcaaaggagtgactctcaaaaaaacatgatcaccctcctgaaactcaagatcctttttccgcttgtcatggtaactcttctgtcgactctgcga 25848213  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| |||||||   | ||||||| ||||||||||||||||||||||||||| |||||    
T  25848214 agctttcatcttttctcttatcaatctgactttctcagtagtctcatgaaccaagtccggtcccaacac 25848282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 20342321 - 20342489
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||||||| || || ||||||||||||||||||  |||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  20342321 cacctgtcaaaggggtgactctcagaaaaacatgatcacgctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 20342420  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| ||||||||||||||||||||||||||| |||||    
T  20342421 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgaaccaagtccggtcccaacac 20342489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 37545826 - 37545657
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaa-catgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcg 118  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||||||||||| ||  ||||||| ||||||||||||||||| |||||| |||||||||    
T  37545826 cacccgtcaaaggagtgaccctcagaaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactgttctgtcgactctgcg 37545727  T
Q  119 aagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||||||||||| ||||||| | | ||||||| |||||||||||| ||||| |||||||| |||||    
T  37545726 aagctttcatcttttctcttatcaaccttactttctcagtagtctcatgtaccaaatccggtcccaacac 37545657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 24798726 - 24798558
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| || |||||||||||||||||| ||||| ||||||| ||  |||| || |||||||||||||||||||||||| ||||||||||    
T  24798726 cacccgtcaaaggagtgactctcagaaaaacatgatcaccctccagaaactcaagatccttccttcgcttgtcatggtaactcttctgtcgactctgcga 24798627  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||| |||||||||||||||||||  | ||||||| ||||||||| |||||||| ||| |||| |||||    
T  24798626 agctctcatcttttcccttatcattctgactttctcagtagtctcgtgaaccaaatccagtcccaacac 24798558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 22236249 - 22236081
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| || ||||| || ||||||||||| |||||||||||| ||||||||||    
T  22236249 cacccgtcataggagtaaccctcagaaatacatgatcaccctcctgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgactctgcga 22236150  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || | |||||| |||||||  ||||||| ||||||||| |||||||| |||||    
T  22236149 cgctttcatcttctctctgaccatcttgactttctctgtagtctgatgaaccaactccggtcccaacac 22236081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 17269662 - 17269494
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  |||||||| || ||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  17269662 cacccgtcatcggagtaactcttagaaatacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 17269563  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| ||||| |  |||||||| |||||||| |||||||| |||||    
T  17269562 cgctttcatcttctctctgatcatcttgactttttctgtagtctcctgaaccaaatccggtcccaacac 17269494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 23442622 - 23442454
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || |||| ||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||||||| ||||||||||    
T  23442622 cacccgtcataggagtgactctcaaaaacacatgatctccctcttgaaactcaagagccttcctacgcttgtcatggtaactcttctgtcgactctgcga 23442523  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| |||||||| |||||    
T  23442522 cgctttcatcttttctcttatcatcttgactttctctgtagtctgatgaaccaaatccggtcccaacac 23442454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 22461991 - 22462159
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||||||||| ||| | ||||||||||| ||  |||| || ||||||||||| || ||||| ||| ||||||||||    
T  22461991 cacccgtcataggagtaaccctcagaaaaacatggtcaccttcctgaaactcaaggtccttcctacgcttgtcatgatagctcttttgtcgactctgcga 22462090  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| ||||| |||||||| |||||||  ||||| ||||||||||| ||||| || |||||    
T  22462091 cgctttcatcttctccctaatcatcttgactttctctgtagtttcatgaaccaattccggccccaacac 22462159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 20821492 - 20821660
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctc-cgcttgtcatggtaactcttctgttgactctgcg 118  Q
    ||||||||| |||||||||||||||||||||||||||| | |||||||| || || | ||||||  |||||||||||||| ||||| ||| |||||||||    
T  20821492 cacccgtcataggagtaaccctcagaaaaacatgatcaccttcctgaaattcaag-gtctttcttacgcttgtcatggtagctcttttgtcgactctgcg 20821590  T
Q  119 aagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    | ||||||||||| || || |||||| |||||||||  ||||||||||||||||| ||||| || |||||    
T  20821591 acgctttcatcttctctctgatcatcctaactttctctgtagtctcatgaaccaaatccggccccaacac 20821660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 21891088 - 21890935
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| ||| ||||| |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||||| | ||||||||||    
T  21891088 caccagtcataggtgtaactctcagaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttctatcgactctgcga 21890989  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaa 173  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| |||||||||    
T  21890988 cgctttcatcttttctcttatcatcttgactttctctgtagtctgatgaaccaa 21890935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 28895271 - 28895109
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||||||||| ||| | |||||||| || ||  | || || ||||||||||| || ||||| ||| ||||||||||    
T  28895271 cacccgtcataggagtaactctcagaaaaacatggtcaccttcctgaaattcaaggtctttcctacgcttgtcatgatagctcttttgtcgactctgcga 28895172  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     ||||||||||| || || |||||| | ||||| |  ||||||||||||||||| ||||||||    
T  28895171 cgctttcatcttctctctgatcatcctgactttttccgtagtctcatgaaccaaatccggtcc 28895109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 28924097 - 28923935
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||||||||| ||| | |||||||| || ||  | || || ||||||||||| || ||||| ||| ||||||||||    
T  28924097 cacccgtcataggagtaactctcagaaaaacatggtcaccttcctgaaattcaaggtctttcctacgcttgtcatgatagctcttttgtcgactctgcga 28923998  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     ||||||||||| || || |||||| | ||||| |  ||||||||||||||||| ||||||||    
T  28923997 cgctttcatcttctctctgatcatcctgactttttccgtagtctcatgaaccaaatccggtcc 28923935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 20773801 - 20773961
Alignment:
Q  22 cccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaag 121  Q
    ||||||| ||||||||||||||||||||||||  |  | ||||||||||  ||  | || |  ||||||||||| || ||||| ||| |||||||||| |    
T  20773801 cccgtcataggagtaaccctcagaaaaacatggcccccttcctgaaactgaagctctttccgacgcttgtcatgatagctcttttgtcgactctgcgacg 20773900  T
Q  122 ctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
    |||||||||| || || |||||||| |||||||  ||||||||||||||||| ||||||||    
T  20773901 ctttcatcttctctctaatcatcttgactttctctgtagtctcatgaaccaattccggtcc 20773961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 24735940 - 24735811
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || ||||  || ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||    
T  24735940 cacccgtcataggagtgactctcaagaacacatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcga 24735841  T
Q  120 agctttcatcttttcccttatcatcttaac 149  Q
     |||||||||| ||| ||||||| ||||||    
T  24735840 cgctttcatctgttctcttatcaacttaac 24735811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 24749883 - 24749754
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || ||||  || ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||    
T  24749883 cacccgtcataggagtgactctcaagaacacatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcga 24749784  T
Q  120 agctttcatcttttcccttatcatcttaac 149  Q
     |||||||||| ||| ||||||| ||||||    
T  24749783 cgctttcatctgttctcttatcaacttaac 24749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 26738975 - 26738893
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    |||||||||||||||| ||||||    
T  26738975 tttctacgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttcttgaatcatcttaactttctcagtagt 26738893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 22134766 - 22134868
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | ||||| ||||| |||||||||||||| ||| |||||||||| |||||||| || ||    ||||||| |||||||| |||||    
T  22134766 tcctgaaactcaagatcttttctgcgcttatcatggtaactcttttgtcgactctgcgacgctttcattttctcttgaatcatctgaactttctcagtag 22134865  T
Q  161 tct 163  Q
    |||    
T  22134866 tct 22134868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 23503539 - 23503649
Alignment:
Q  77 cctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtc 176  Q
    ||||||||| ||| ||||| ||||||||||||  |||||| || ||||||||||| |||   ||||||||||| || |  |||||||| || ||||  ||    
T  23503539 cctttctcctcttatcatgataactcttctgtctactctgagacgctttcatcttctcctgaatcatcttaaccttttccgtagtctcttgcaccacttc 23503638  T
Q  177 cggtcctaaca 187  Q
    |||||||||||    
T  23503639 cggtcctaaca 23503649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 21498300 - 21498251
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttc 134  Q
    ||||| |||||||||||||| ||| |||||||||| ||||||||||||||    
T  21498300 cgcttatcatggtaactcttttgtcgactctgcgacgctttcatcttttc 21498251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 21831995 - 21831943
Alignment:
Q  97 taactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaac 149  Q
    |||||||||||| |||||||||| |||||||||||||| ||||| | ||||||    
T  21831995 taactcttctgtcgactctgcgacgctttcatcttttctcttattagcttaac 21831943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 23516657 - 23516712
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttc 134  Q
    ||||| ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    
T  23516657 tttctacgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttc 23516712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 24737114 - 24737015
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || ||||  || ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||    
T  24737114 cacccgtcataggagtgactctcaagaacacatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcga 24737015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 23573864 - 23573942
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    |||||||||||||||| ||||||||    
T  23573864 cgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttctcagtagtct 23573942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 25423311 - 25423357
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatctt 131  Q
    ||||| |||||||||||||| ||| |||||||||| |||||||||||    
T  25423311 cgcttatcatggtaactcttttgtcgactctgcgacgctttcatctt 25423357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 11210961 - 11210856
Alignment:
Q  82 ctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtc 181  Q
    |||| ||| ||||| ||||||||||||  |||||| || ||||||||||| |||   |||||||||||||| |  |||||||| || || |  |||||||    
T  11210961 ctcctcttatcatgataactcttctgtctactctgagatgctttcatcttctcctgaatcatcttaactttttccgtagtctcttgcacaacttccggtc 11210862  T
Q  182 ctaaca 187  Q
    ||||||    
T  11210861 ctaaca 11210856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 21339550 - 21339474
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| |||||||| | ||||||||||||||    ||||||||||| |||| ||||||    
T  21339550 cgcttatcatgataactcttttgtcgactctgcaacgctttcatcttttcttgaatcatcttaaccttctcagtagt 21339474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 8e-60; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 11358561 - 11358393
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| || |||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||    
T  11358561 cacccgtcaaaggagtgactctcagaaaaacatgatcaccctcctgaaactcaagatcctttctccgcttgtcatggtaactcttctgtcgactctgcga 11358462  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| ||||||||||||||||||||||||||| |||||    
T  11358461 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgaaccaagtccggtcccaacac 11358393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 20832741 - 20832903
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| |||||| |||    
T  20832741 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctacga 20832840  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
    ||||||||||||||| |||||||   | ||||||| |||||||||||||||||| ||||||||    
T  20832841 agctttcatcttttctcttatcaatctgactttctcagtagtctcatgaaccaaatccggtcc 20832903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 1063507 - 1063675
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  1063507 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 1063606  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||| |||||||||| ||||||| | | ||||||| |||||||||||| ||||| || ||||| |||||    
T  1063607 agctctcatcttttctcttatcaaccttactttctcagtagtctcatgtaccaaatctggtcccaacac 1063675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 31830414 - 31830582
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| || |||||||||||||||||| |||||||||| || ||  ||||||| |||||||||||||||||||||||  ||||||||||    
T  31830414 cacccgtcaaaggagtgactctcagaaaaacatgatcaccctcctgaaattcaagatcctttcttcgcttgtcatggtaactcttctgccgactctgcga 31830513  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| |||||||||||| ||||| |||||||| |||||    
T  31830514 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgcaccaaatccggtcccaacac 31830582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 23293714 - 23293882
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||| ||||||||||||| || ||||| || ||||||||||| ||||||||| || ||||||||||    
T  23293714 cacccgtcataggagtaactctcagaaatacatgatcaccctcctgaaactcaagggccttcctacgcttgtcatgataactcttccgtcgactctgcga 23293813  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| || |||||||| |||||||   |||||| ||||||||| |||||||| |||||    
T  23293814 cgctttcatcttttctctgatcatcttgactttctctatagtctgatgaaccaaatccggtcccaacac 23293882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 12574109 - 12574277
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  || |||||||| ||||| ||||||||| |||| |||||||| || ||||| ||||||||||||||||||||||||||| ||||||| ||    
T  12574109 cacccgtcatcggggtaacccttagaaatacatgatcaccctcttgaaactcaagggccttcctccgcttgtcatggtaactcttctgtcgactctgtga 12574208  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| ||||| |  |||||||| |||||||| |||||||| |||||    
T  12574209 cgctttcatcttctctctgatcatcttgactttttctgtagtctcctgaaccaaatccggtcccaacac 12574277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 23276532 - 23276700
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||| ||| ||||||||  |||||||| ||||||||| ||||||||||||| || ||||| || ||||||||||| |||||||| ||| ||||||||||    
T  23276532 cacccatcataggagtaaatctcagaaatacatgatcaccctcctgaaactcaagggccttcctacgcttgtcatgataactcttatgtcgactctgcga 23276631  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||| | |||||||  ||||||| ||||||||| |||||||| |||||    
T  23276632 cgctttcatcttctctctgatcatcatgactttctccgtagtctgatgaaccaaatccggtcccaacac 23276700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 27787497 - 27787659
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || || ||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||    
T  27787497 cacccgtcatcggagtcactcttagaaatacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgtga 27787596  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     ||||||||||| || || |||| ||| ||||| |  |||||||| |||||||| ||||||||    
T  27787597 cgctttcatcttctctctgatcaccttgactttttctgtagtctcctgaaccaaatccggtcc 27787659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 24654101 - 24654187
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttct 106  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| || ||||| || ||||| ||||| ||||||||||    
T  24654101 cacccgtcataggagtaaccctcagaaatacatgatcaccctcctgaaactcaagggccttcctacgcttatcatgataactcttct 24654187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 27365766 - 27365637
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| |||||||  || ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||    
T  27365766 cacctgtcataggagtgaccctcaagaacacatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcga 27365667  T
Q  120 agctttcatcttttcccttatcatcttaac 149  Q
     |||||||||| ||| ||||| | ||||||    
T  27365666 cgctttcatctgttctcttattaacttaac 27365637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 45529333 - 45529442
Alignment:
Q  86 gcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaa 185  Q
    |||| ||||| |||||||| |||  ||||||||| |||||||||||||| || |||| |||||| |||||||||||||  ||||| | ||||||||| ||    
T  45529333 gcttatcatgataactcttttgtctactctgcgatgctttcatcttttctctaatcaacttaaccttcttagtagtctgttgaacaatgtccggtcccaa 45529432  T
Q  186 caccaaactc 195  Q
     |||| ||||    
T  45529433 taccacactc 45529442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 163
Target Start/End: Complemental strand, 30211560 - 30211461
Alignment:
Q  64 tgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    |||||||| ||  |||| || ||||| ||| |||||||||| |||  ||||||||| |||||||||||||| || |||| |||||| |||| ||||||||    
T  30211560 tgaaactcaagatccttcctacgcttatcacggtaactcttttgtctactctgcgacgctttcatcttttctctaatcaacttaaccttctcagtagtct 30211461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 23087250 - 23087328
Alignment:
Q  64 tgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatca 142  Q
    |||||||| ||  ||||||| | ||||||||| |||||||||||| |||||| ||| ||||||||||| || |||||||    
T  23087250 tgaaactcaaggacctttctacacttgtcatgataactcttctgtcgactctacgacgctttcatcttctctcttatca 23087328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 21325888 - 21325819
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttct 154  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    ||||||||||||||||    
T  21325888 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttcttgaatcatcttaactttct 21325819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 24945123 - 24945167
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcct 64  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||    
T  24945123 cacccgtcataggagtaaccctcagaaatacatgatcaccctcct 24945167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 21145717 - 21145576
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || |||| ||| || || ||  | ||||||||||| ||  | ||||| ||||| ||||| |||||||| ||| ||||||||||    
T  21145717 cacccgtcataggagtgactctcaaaaacacgtggtctccttcctgaaactcaagatcttttctacgcttatcatgataactcttttgtcgactctgcga 21145618  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
     |||||||| || ||    ||||||| |||||||| ||||||    
T  21145617 cgctttcattttctcttgaatcatctgaactttctcagtagt 21145576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 23138858 - 23138907
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttc 134  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    
T  23138858 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttc 23138907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 23550648 - 23550697
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttc 134  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    
T  23550648 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttc 23550697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 24675304 - 24675388
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| ||||| |||||||| ||| |||||| ||| |||||||| || ||    |||||||||||||||| ||||||||    
T  24675304 tttctacgcttatcatgataactcttttgtcgactctacgacgctttcattttctcttgaatcatcttaactttctcagtagtct 24675388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 24825904 - 24825828
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||| | ||| |||||||||| ||||||||||||||    ||||||||||| |||| ||||||    
T  24825904 cgcttatcatgataactcctttgtcgactctgcgacgctttcatcttttcttggatcatcttaaccttctcagtagt 24825828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 21821 - 21653
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||| | | |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  21821 cacccgtcataggagtaaccctcagaaatacatggttaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 21722  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| |||||    
T  21721 cgctttcatcttttcccttatcatcttgactttctcagtagtctgatgaaccaagtccggtcccaacac 21653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 112; Significance: 8e-57; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 20 - 195
Target Start/End: Original strand, 20278 - 20453
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| | |||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  20278 cacccgtcataagagtaaccctcagaaacacatgatcaccctcctgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 20377  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
     |||||||||||||| || |||||||| ||||| || ||||||||||||||||| |||||||| ||||||| ||||    
T  20378 cgctttcatcttttctctaatcatcttgacttttttcgtagtctcatgaaccaaatccggtcccaacaccacactc 20453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 43666 - 43836
Alignment:
Q  25 gtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctt 124  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||| ||||||||| | |||||| ||| ||||    
T  43666 gtcataggagtaaccctcagaaacacatgatcaccctcctgaaactcaagggcctttctccgcttgtcatggcaactcttctatcgactctacgacgctt 43765  T
Q  125 tcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
    |||||||||| || |||||||||||||| |  ||||||||||||||||| |||| ||| ||||||| ||||    
T  43766 tcatcttttctctgatcatcttaactttttctgtagtctcatgaaccaaatccgttcccaacaccacactc 43836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 44678 - 44848
Alignment:
Q  25 gtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctt 124  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||| ||||||||| | |||||| ||| ||||    
T  44678 gtcataggagtaaccctcagaaacacatgatcaccctcctgaaactcaagggcctttctccgcttgtcatggcaactcttctatcgactctacgacgctt 44777  T
Q  125 tcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
    |||||||||| || |||||||||||||| |  ||||||||||||||||| |||| ||| ||||||| ||||    
T  44778 tcatcttttctctgatcatcttaactttttctgtagtctcatgaaccaaatccgttcccaacaccacactc 44848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 1e-55; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 37677219 - 37677388
Alignment:
Q  20 cacccgtcaaaggagtaaccctca-gaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcg 118  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| |||||||||    
T  37677219 cacccgtcaaaggagtgaccctcaagaaaaacatgatcaccctcctgaaactccagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcg 37677318  T
Q  119 aagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||||||||||||||||||| | | ||||||| |||||||||||||||||| |||||||| |||||    
T  37677319 aagctttcatcttttcccttatcaacctgactttctcagtagtctcatgaaccaaatccggtcccaacac 37677388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 20294552 - 20294720
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||  |||| || |||||||||||||||||||||||| ||||||||||    
T  20294552 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcttgaaactcaagatccttccttcgcttgtcatggtaactcttctgtcgactctgcga 20294651  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||||  | || |||| ||||||||||||||||||||||||||| |||||    
T  20294652 agctttcatcttttcccttatcattctgaccttctcagtagtctcatgaaccaagtccggtcccaacac 20294720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 22433335 - 22433159
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||||||||| || ||||||||| ||||||||||||| || | ||||||||||||||||||||||||||||||| ||||||||||    
T  22433335 cacccgtcataggagtaaccctcaggaacacatgatcaccctcctgaaactcaaggggctttctccgcttgtcatggtaactcttctgtcgactctgcga 22433236  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactcg 196  Q
     |||||||||||||| || |||||||||||||| |  ||||||||||||||||| | |||||| ||||||| |||||    
T  22433235 cgctttcatcttttctctgatcatcttaactttttctgtagtctcatgaaccaaattcggtcccaacaccacactcg 22433159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 20075278 - 20075128
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| | |||| |||||    
T  20075278 cacccgtcaaaggagtgacccttagaaaaacatgatcaccctcctgaaactcaagagcctttctccgcttgtcatggtaactcttctatcgactttgcga 20075179  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaac 170  Q
    ||||||||||||||||||||||| | | ||||||| |||||||||||||||    
T  20075178 agctttcatcttttcccttatcaacctgactttctcagtagtctcatgaac 20075128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 31550400 - 31550232
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| |||| |||||    
T  31550400 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactttgcga 31550301  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | |||||||  |||||||||||||| || |||||||| |||||    
T  31550300 agctttcatcttttctcttatcaacctgactttctccgtagtctcatgaactaaatccggtcccaacac 31550232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 11382734 - 11382902
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| || |||||||||||||||||| ||||||||||||| ||  |||| || |||||||||||||||||||||||| ||||||||||    
T  11382734 cacccgtcaaaggagtgactctcagaaaaacatgatcaccctcctgaaactcaagatccttccttcgcttgtcatggtaactcttctgtcgactctgcga 11382833  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| |||||||   | ||||||| |||||||||||| ||||| |||||||| |||||    
T  11382834 agctttcatcttttctcttatcaatctgactttctcagtagtctcatgtaccaaatccggtcccaacac 11382902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 41307965 - 41308135
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||| ||  |||| |||||||| || | |||||| |||||||||||||||||||||||| ||||||||||    
T  41307965 cacccgtcataggagtaaccctcagaaacacatggtctccctcttgaaactcaaggggctttctacgcttgtcatggtaactcttctgtcgactctgcga 41308064  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
     |||||||||||||| ||||| || || |||||||  ||||||| ||||||||| ||| |||| |||||||    
T  41308065 cgctttcatcttttctcttattattttgactttctccgtagtctgatgaaccaaatccagtcccaacacca 41308135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 20940282 - 20940114
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||| ||||||||||||| || ||||| || ||||| ||||| |||||||||||| ||||||||||    
T  20940282 cacccgtcataggagtaactctcagaaatacatgatcaccctcctgaaactcaagggccttcctacgcttatcatgataactcttctgtcgactctgcga 20940183  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| || |||||||| |||||||   |||| | ||||||||| |||||||| |||||    
T  20940182 tgctttcatcttttctctgatcatcttgactttctctatagtttgatgaaccaaatccggtcccaacac 20940114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 19854454 - 19854622
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || ||||| || ||||||||||| |||||||||||| |||| |||||    
T  19854454 cacccgtcataggagtaactctcagaaatacatgatctccctcttgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgactttgcga 19854553  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| |||||||  ||||||| ||||||||| |||||||| |||||    
T  19854554 cgctttcatcttctctctgatcatcttgactttctctgtagtctgatgaaccaaatccggtcccaacac 19854622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 20244340 - 20244437
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgc 117  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  20244340 cacccgtcataggagtaaccctcagaaagacatgatcaccctcctgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgc 20244437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 19665093 - 19664927
Alignment:
Q  22 cccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaag 121  Q
    ||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || || || || ||||||||||| |||||||||||| |||||||||| |    
T  19665093 cccgtcataggagtaactctcagaaatacatgatctccctcttgaaactcaagggctttcctacgcttgtcatgataactcttctgtcgactctgcgacg 19664994  T
Q  122 ctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||||| || || |||||||| |||||||  ||||||| ||||||||| |||| ||| |||||    
T  19664993 ctttcatcttctctctgatcatcttgactttctctgtagtctgatgaaccaaatccgatcccaacac 19664927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 20836107 - 20835945
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||| |||||  || ||||| |  ||||||||||| |||||||| ||| ||||||||||    
T  20836107 cacccgtcataggagtaactctcagaaaaacatgatcaccctcctaaaacttaagggccttccaacgcttgtcatgataactcttatgtcgactctgcga 20836008  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     ||||||||||| || || |||||||| |||||||  ||||||| ||||||||| || |||||    
T  20836007 cgctttcatcttctctctgatcatcttgactttctctgtagtctgatgaaccaaatctggtcc 20835945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 20856980 - 20856827
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||||||||| ||| | ||||||||| | ||  |||| || |||||||| || || ||||| ||| ||||||||||    
T  20856980 cacccgtcataggagtaaccctcagaaaaacatggtcaccttcctgaaacgcaaggtccttcctacgcttgtcgtgatagctcttttgtcgactctgcga 20856881  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaa 173  Q
      |||||||||| ||||| |||||||| |||||||  ||||| |||||||||||    
T  20856880 cactttcatcttctccctaatcatcttgactttctccgtagtttcatgaaccaa 20856827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 20250049 - 20250131
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||||||||| ||| |||||||||| ||||||||||||||    |||||||||||||||| ||||||    
T  20250049 tttctacgcttatcatggtaactcttttgtcgactctgcgacgctttcatcttttcttgaatcatcttaactttctcagtagt 20250131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 19106548 - 19106648
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | ||||||||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    |||||||||||||||| |||||    
T  19106548 tcctgaaactcaagatcttttctccgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttctcagtag 19106647  T
Q  161 t 161  Q
    |    
T  19106648 t 19106648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 17045234 - 17045091
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || |||| ||| ||||| ||  | ||||||||||| ||  |||| || ||||| ||||| |||||||| ||| ||||||||||    
T  17045234 caccggtcacaggagtgactctcaaaaacacatggtctccttcctgaaactcaagatccttcctgcgcttatcatgataactcttttgtcgactctgcga 17045135  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
     |||||||| || ||    |||||||||||||||| ||||||||    
T  17045134 cgctttcattttctcttgaatcatcttaactttctcagtagtct 17045091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 21747732 - 21747815
Alignment:
Q  78 ctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    |||||| ||||| | |||||||||||| ||| |||||||||| ||||||||||||||    ||||||||||| |||| ||||||    
T  21747732 ctttctacgcttattatggtaactcttttgtcgactctgcgacgctttcatcttttcttgaatcatcttaaccttctcagtagt 21747815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 16078806 - 16078728
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    |||||||||||||||| ||||||||    
T  16078806 cgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttctcagtagtct 16078728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 20395212 - 20395175
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatca 57  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  20395212 cacccgtcaaaggagtgaccctaagaaaaacatgatca 20395175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 20136983 - 20137059
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| |||||||||||||| ||| ||||||||||  |||||||||| ||    ||||||||||| |||| ||||||    
T  20136983 cgcttatcatggtaactcttttgtcgactctgcgacactttcatcttctcttgaatcatcttaaccttctcagtagt 20137059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 16863 - 16695
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| | ||||||||    
T  16863 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcggctctgcga 16764  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| |||||||   | ||||||| ||||||||||||||||||||||||||| |||||    
T  16763 agctttcatcttttctcttatcaatctgactttctcagtagtctcatgaaccaagtccggtcccaacac 16695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 5e-55; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 10383723 - 10383891
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  10383723 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagatcctttcttcgcttgtcatggtaactcttctgtcgactctgcga 10383822  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| ||||||||||||||| || |||||||| |||||    
T  10383823 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgaactaaatccggtcccaacac 10383891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 16330034 - 16329866
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||||||  ||||||||||||||||||| ||| ||||||| ||    
T  16330034 cacctgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagagcctttctttgcttgtcatggtaactcttatgtcgactctgtga 16329935  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||||||||||| | | ||||||| ||||||||||||||||||||||||||| |||||    
T  16329934 agctttcatcttttcccttatcaacctgactttctcagtagtctcatgaaccaagtccggtcccaacac 16329866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 47123698 - 47123866
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| || |||||||||||||||||| |||||||||| || ||  ||||||| |||||||||||||||||||||||  ||||||||||    
T  47123698 cacccgtcaaaggagtgactctcagaaaaacatgatcaccctcctgaaattcaagatcctttcttcgcttgtcatggtaactcttctgccgactctgcga 47123797  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||| | | ||||||| |||||||||||| ||||| |||||||| |||||    
T  47123798 agctttcatcttttctcttatcaacctgactttctcagtagtctcatgcaccaaatccggtcccaacac 47123866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 11961405 - 11961241
Alignment:
Q  24 cgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagct 123  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||| || |||||||||||||||||||||||| |||||||| ||||     
T  11961405 cgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagagccttccttcgcttgtcatggtaactcttctgtcgactctgcaaagcc 11961306  T
Q  124 ttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||||||||||||||| || || || | ||| |||||||||||||  |||||||| |||||    
T  11961305 ttcatcttttcccttatcattttgaccttttcagtcgtctcatgaaccacatccggtcccaacac 11961241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 15953343 - 15953175
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||  |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||| ||| ||||||||||    
T  15953343 cacccgtcataggagtaaatctcagaaatacatgatctccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttttgtcgactctgcga 15953244  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| |||||||| |||||    
T  15953243 cgctttcatcttttctcttatcatcttgactttctctgtagtctgatgaaccaaatccggtcccaacac 15953175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 16836885 - 16836717
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  |||||||| |||| ||| ||||||||| ||||||||||||| || ||||| |||||||| ||||||||||| |||||| ||||||| ||    
T  16836885 cacccgtcatcggagtaactctcaaaaatacatgatcaccctcctgaaactcaagggccttcctccgcttatcatggtaacttttctgtcgactctgtga 16836786  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||||||| || |||| ||| |||||||||||||| || ||||| |||||    
T  16836785 cgctttcatcttttcccttatcatcttgaccttctcagtcgtctcatgaaccaaatctggtcccaacac 16836717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 12360904 - 12360755
Alignment:
Q  33 agtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttt 132  Q
    |||||| |||||||| ||||||||| ||||||||||||| || ||||| || ||||||||||| |||||||||||| |||| ||||| ||||||||||||    
T  12360904 agtaactctcagaaatacatgatcaccctcctgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgactttgcgacgctttcatcttt 12360805  T
Q  133 tcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
    |||||||||||||| |||||||  ||||||  |||||||||||| |||||    
T  12360804 tcccttatcatcttgactttctctgtagtccgatgaaccaagtctggtcc 12360755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 8759457 - 8759289
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || || ||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||    
T  8759457 cacccgtcatcggagtcactcttagaaatacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgtga 8759358  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| ||||| |  |||||||| |||||||| |||||||| |||||    
T  8759357 cgctttcatcttctctctgatcatcttgactttttctgtagtctcctgaaccaaatccggtcccaacac 8759289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 13941778 - 13941946
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || || ||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||    
T  13941778 cacccgtcatcggagtcactcttagaaatacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgtga 13941877  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| ||||| |  |||||||| |||||||| |||||||| |||||    
T  13941878 cgctttcatcttctctctgatcatcttgactttttctgtagtctcctgaaccaaatccggtcccaacac 13941946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 14571602 - 14571770
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||| ||| ||||||||  |||| |||||||| || ||||| || ||||||||| ||||||||||| || ||||||||||    
T  14571602 cacccgtcataggagtaactctcaaaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcacggtaactcttcagtcgactctgcga 14571701  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| |||||||  || |||| ||||||||| |||||||| |||||    
T  14571702 cgctttcatcttttctcttatcatcttgactttctccgtggtctgatgaaccaaatccggtcccaacac 14571770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 41177276 - 41177438
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  ||||| || || ||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||    
T  41177276 cacccgtcatcggagtcactcttagaaatacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgtga 41177375  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     ||||||||||| || || |||||||| ||||| |  |||||||| |||||||| ||||||||    
T  41177376 cgctttcatcttctctctgatcatcttgactttttctgtagtctcctgaaccaaatccggtcc 41177438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 10420420 - 10420252
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||||||||||||||||||||||||| | |||||||| || ||  | || || |||||||||||||| ||||| ||| ||||||||||    
T  10420420 cacctgtcataggagtaaccctcagaaaaacatgatcaccttcctgaaattcaaggtctttcctacgcttgtcatggtagctcttttgtcgactctgcga 10420321  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||| | |||||||  || |||||||||||||| |||||||| |||||    
T  10420320 cgctttcatcttctctctaatcatcctgactttctccgtggtctcatgaaccaaatccggtcccaacac 10420252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 18134721 - 18134553
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| ||||||||| |||||||| ||| ||||| ||||||||||||| || ||||| || ||||||||||| |||||||||||| ||||||||||    
T  18134721 caccagtcataggagtaactctcagaaatacaagatcaccctcctgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgactctgcga 18134622  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || |  ||||| || ||||| |  ||||||| ||||||||| |||||||| |||||    
T  18134621 cgctttcatcttctctccgatcattttgactttatctgtagtctgatgaaccaaatccggtcccaacac 18134553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 12850653 - 12850532
Alignment:
Q  21 acccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaa 120  Q
    |||||||| |||||| || |||||||| |||||||| ||||| |||||||| || |||||| | |||||||||||||||||||||||| ||||||||||     
T  12850653 acccgtcacaggagtgactctcagaaacacatgatcttcctcttgaaactcaagggcctttattcgcttgtcatggtaactcttctgtcgactctgcgac 12850554  T
Q  121 gctttcatcttttcccttatca 142  Q
     ||||||||||||| |||||||    
T  12850553 actttcatcttttctcttatca 12850532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 188
Target Start/End: Complemental strand, 11304128 - 11303980
Alignment:
Q  40 ctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttccctta 139  Q
    |||||||| ||||||||| |||| |||||||| || |||||  | |||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||    
T  11304128 ctcagaaatacatgatcaccctcttgaaactcaagagccttcatacgcttgtcatggtaactcttctgtcgactttgcgacgctttcatcttttctctta 11304029  T
Q  140 tcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||| || ||||  |||| || ||||| ||| | |||||| |||||    
T  11304028 tcatctttaccttctccgtagcctgatgaatcaaattcggtcccaacac 11303980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 16381302 - 16381143
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  |||||||| || | ||| ||||||||| | ||| ||||||| || |||||||||||||||||||||||||   ||||| ||||||||||    
T  16381302 cacccgtcatcggagtaactcttaaaaatacatgatcaccatcccgaaactcaagggcctttctccgcttgtcatggtaac---tctgtcgactctgcga 16381206  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     ||||||||||| || || |||||||| || || |  ||||||||||||||||| ||||||||    
T  16381205 cgctttcatcttctctctgatcatcttgaccttttctgtagtctcatgaaccaaatccggtcc 16381143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 22 - 188
Target Start/End: Complemental strand, 13323025 - 13322859
Alignment:
Q  22 cccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaag 121  Q
    ||||||| ||||||||| |||||||| ||||| ||  ||||||||||| | ||  | || || ||||||||||| || ||||||||| |||||||||| |    
T  13323025 cccgtcataggagtaactctcagaaacacatggtctccctcctgaaacccaagatctttcctacgcttgtcatgatagctcttctgtcgactctgcgacg 13322926  T
Q  122 ctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||| ||||  | |||||||| |||||||  ||||||| ||||||||| |||||||| |||||    
T  13322925 ctttcatcctttctatgatcatcttgactttctctgtagtctgatgaaccaaatccggtcccaacac 13322859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 43 - 188
Target Start/End: Original strand, 44777024 - 44777169
Alignment:
Q  43 agaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatca 142  Q
    ||||| ||||||||| |||| || ||||| || ||||| |||| |||||||||||||||||||||| |||||||||| ||||||||||| || || ||||    
T  44777024 agaaatacatgatcaccctcttggaactcaagggccttcctcctcttgtcatggtaactcttctgtcgactctgcgacgctttcatcttctctctgatca 44777123  T
Q  143 tcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||| ||||| |  |||||||| ||||| || || ||||| |||||    
T  44777124 tcttgactttttctgtagtctcctgaactaaatctggtcccaacac 44777169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 15227447 - 15227525
Alignment:
Q  64 tgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatca 142  Q
    |||||||| ||  ||||||| ||||||||||| |||||||||||| ||||||||||  |||||||||| || |||||||    
T  15227447 tgaaactcaagatcctttctacgcttgtcatgataactcttctgtcgactctgcgacactttcatcttctctcttatca 15227525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 17492489 - 17492552
Alignment:
Q  125 tcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||||||||||||||||| || ||||  ||||||| ||||||||| |||||||| |||||    
T  17492489 tcatcttttcccttatcatctttaccttctccgtagtctgatgaaccaaatccggtcccaacac 17492552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 16371222 - 16371300
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||| ||    |||||||||||||||| ||||||||    
T  16371222 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttctcttgaatcatcttaactttctcagtagtct 16371300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 13972495 - 13972386
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || ||||  || ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||    
T  13972495 cacctgtcataggagtgactctcaagaacacatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcga 13972396  T
Q  120 agctttcatc 129  Q
     |||||||||    
T  13972395 cgctttcatc 13972386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 14086427 - 14086536
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || ||||  || ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||    
T  14086427 cacctgtcataggagtgactctcaagaacacatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcga 14086526  T
Q  120 agctttcatc 129  Q
     |||||||||    
T  14086527 cgctttcatc 14086536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 15208700 - 15208776
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||||||| |||||| ||| ||||||||||||||    ||||||||||| |||| ||||||    
T  15208700 cgcttatcatgataactcttctgtcgactctacgacgctttcatcttttcttgaatcatcttaaccttctcagtagt 15208776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 15247956 - 15248032
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||||||| ||||||| || ||||||||||||||    ||||||||||| |||| ||||||    
T  15247956 cgcttatcatgataactcttctgtcgactctgtgacgctttcatcttttcttgaatcatcttaaccttctcagtagt 15248032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 9522522 - 9522577
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttc 134  Q
    ||||| ||||| |||||||||||||| ||| ||||||| || ||||||||||||||    
T  9522522 tttctacgcttatcatggtaactcttttgtcgactctgtgacgctttcatcttttc 9522577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 12498057 - 12498135
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    |||||||||||||||| ||||||||    
T  12498057 cgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttctcagtagtct 12498135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 16691945 - 16692047
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  ||||  | ||||| ||||| |||||||||||| |||||||||| |||||||| || ||    |||||||||||||| | |||||    
T  16691945 tcctgaaactcaagatccttcttgcgcttatcatgataactcttctgtcgactctgcgacgctttcattttctcttgaatcatcttaactttttcagtag 16692044  T
Q  161 tct 163  Q
    |||    
T  16692045 tct 16692047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 16756912 - 16756830
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| ||||| |||||||||||| |||||||||| || ||||| || || |  ||||||| |||||||| ||||||    
T  16756912 tttctacgcttatcatgataactcttctgtcgactctgcgacgccttcattttctctcggatcatctgaactttctcagtagt 16756830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 14876826 - 14876774
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatctt 131  Q
    ||||| ||||| ||||| |||||||| ||| |||||||||| |||||||||||    
T  14876826 tttctacgcttatcatgataactcttttgtcgactctgcgacgctttcatctt 14876774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 19276 - 19438
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||||||| | ||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||    
T  19276 cacccgtcataggagtaaccctcagaaatacatgatcaccatcctgaaactcaaggtcctttctccgcttgtcatggtaactcttctgtcgactctgcga 19375  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     ||||||||||||||||| |||||||| |||||||  ||||||||||||||||| ||||||||    
T  19376 tgctttcatcttttccctgatcatcttgactttctctgtagtctcatgaaccaaatccggtcc 19438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 4906 - 5076
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || |||||||| |||||||||||||||||||||||| ||||||||||    
T  4906 cacccgtcataggagtaactctcagaaatacatgatctccctcttgaaactcaagggcctttctacgcttgtcatggtaactcttctgtcgactctgcga 5005  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
     |||||||||||||| ||||||||||| ||||||| |||||||| ||||||||| || ||||| |||||||    
T  5006 cgctttcatcttttctcttatcatcttgactttctcagtagtctgatgaaccaaatctggtcccaacacca 5076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 99; Significance: 5e-49; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 52329 - 52159
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||| ||| |||||||||||||||||| ||||||||  ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  52329 cacccatcataggagtaaccctcagaaatacatgatcgccctcctgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 52230  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
     |||||||||||||| || |||||||| |||||||  ||||||||||||||||| || | ||| |||||||    
T  52229 tgctttcatcttttctctgatcatcttgactttctctgtagtctcatgaaccaaatctgatcccaacacca 52159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 61363 - 61193
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||| ||| |||||||||||||||||| ||||||||  ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  61363 cacccatcataggagtaaccctcagaaatacatgatcgccctcctgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 61264  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
     |||||||||||||| || |||||||| |||||||  ||||||||||||||||| || | ||| |||||||    
T  61263 tgctttcatcttttctctgatcatcttgactttctctgtagtctcatgaaccaaatctgatcccaacacca 61193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 67751 - 67581
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||| ||| |||||||||||||||||| ||||||||  ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  67751 cacccatcataggagtaaccctcagaaatacatgatcgccctcctgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 67652  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
     |||||||||||||| || |||||||| |||||||  ||||||||||||||||| || | ||| |||||||    
T  67651 tgctttcatcttttctctgatcatcttgactttctctgtagtctcatgaaccaaatctgatcccaacacca 67581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 39037 - 38869
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| || |||||||||||||||||| |||||||||| || ||  ||||||| ||||||||||| |||||||||||| |||||| |||    
T  39037 cacccgtcaaaggagtgactctcagaaaaacatgatcaccctcctgaaattcaagatcctttcttcgcttgtcatgataactcttctgtcgactctacga 38938  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||||||||| |||||||| | | ||||||| |||||||||||||||||| |||||||| |||||    
T  38937 agctttcatctttttccttatcaacctgactttctcagtagtctcatgaaccaaatccggtcccaacac 38869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 97; Significance: 7e-48; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 14051 - 13883
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| || | ||| ||||||||  |||| |||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||    
T  14051 cacccgtcataggagtaactcttaaaaacacatgatccccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttttgtcgactctgcga 13952  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||| |||||    
T  13951 cgctttcatcttttcccttatcatcttgactttctcagtagtctgatgaaccaaatccggtcccaacac 13883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 5103 - 4935
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||||| ||||||||||    
T  5103 cacccgtcataggagtaactctcagaaatacatgatcatcctcctgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgactctgcga 5004  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| |||||||  ||||||| ||||||||| |||||||| |||||    
T  5003 cgctttcatcttctctctgatcatcttgactttctctgtagtctaatgaaccaaatccggtcccaacac 4935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 195
Target Start/End: Complemental strand, 49357 - 49182
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||| | ||||||||||| ||||||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  49357 cacccgtcataggaatgaccctcagaaacacatgatcaccctcttgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctgcga 49258  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
     |||||||||||||| || |||||||| ||||| |  ||||||||||||||||| || ||||| ||||||| ||||    
T  49257 cgctttcatcttttctctgatcatcttgactttttctgtagtctcatgaaccaaatctggtcccaacaccacactc 49182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 254 - 422
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || ||| |||| |||||||||||||||||||||||| |||||| |||    
T  254 cacccgtcataggagtaactctcagaaatacatgatctccctcttgaaactcaagggcccttctacgcttgtcatggtaactcttctgtcgactctacga 353  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||||||| |||||||  ||||||| ||||||||| |||||||| |||||    
T  354 tgctttcatcttttcccttatcatcttgactttctctgtagtctgatgaaccaaatccggtcccaacac 422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 195
Target Start/End: Original strand, 10938 - 11100
Alignment:
Q  33 agtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttt 132  Q
    ||||||||| ||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||  || || |||||||||    
T  10938 agtaaccctaagaaacacatgatcaccctcctgaaactcaagggcctttctccgcttgtcatggtaactcttctgtcgactctaagacgcattcatcttt 11037  T
Q  133 tcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
    || || |||||||| |||||||  ||||||||||||||||| |||||||| ||||||| ||||    
T  11038 tctctgatcatcttgactttctctgtagtctcatgaaccaaatccggtcccaacaccacactc 11100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 260464 - 260626
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  |||||||| |||| ||| ||||||||| ||||||||||||| || |||||||||||||| ||||||||||| |||||| ||||||||||    
T  260464 cacccgtcatcggagtaactctcaaaaatacatgatcaccctcctgaaactcaagggcctttctccgcttatcatggtaacttttctgtcgactctgcga 260563  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     |||||||||||||||||||||||||| || |||| ||| |||| ||||||||| ||||||||    
T  260564 cgctttcatcttttcccttatcatcttgaccttctcagtcgtctgatgaaccaaatccggtcc 260626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 278921 - 278837
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| ||||| |||||||| ||| |||||||||| |||||||| |||||    |||||||||||||||| ||||||||    
T  278921 tttctacgcttatcatgataactcttttgtcgactctgcgacgctttcattttttcttgaatcatcttaactttctcagtagtct 278837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 164794 - 164718
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    ||||||||||| |||| ||||||    
T  164794 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttcttgaatcatcttaaccttctcagtagt 164718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 16832 - 16946
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||||||||  ||||||||||    
T  16832 cacccgtcaaaggagtgaccctcagaaaaacatgatcaccctcctgaaactcaagagcctttcttcgcttgtcatggtaactcttctgccgactctgcga 16931  T
Q  120 agctttcatcttttc 134  Q
    |||||||||||||||    
T  16932 agctttcatcttttc 16946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 26015 - 25853
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || |||||||| |||||||||||||||||||||||| ||||||| ||    
T  26015 cacccgtcataggagtaactctcagaaatacatgatccccctcttgaaactcaagggcctttctacgcttgtcatggtaactcttctgtcgactctgaga 25916  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     |||||||||||||||||||||||||| || ||||  ||||||| ||| ||||| ||||||||    
T  25915 cgctttcatcttttcccttatcatctttaccttctccgtagtctgatggaccaaatccggtcc 25853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 5369 - 5537
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  |||||||| |||| ||| ||||||||| ||||||||||||| || ||||| |||||||| ||||||||||| |||||| ||||||||||    
T  5369 cacccgtcatcggagtaactctcaaaaatacatgatcaccctcctgaaactcaagggccttcctccgcttatcatggtaacttttctgtcgactctgcga 5468  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||||| |||||||||||| || |||| ||| |||| ||||||||| |||||||| |||||    
T  5469 cgctttcatctttttccttatcatcttgaccttctcagtcgtctgatgaaccaaatccggtcccaacac 5537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 47280 - 47448
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||| | |||||||||||||||||| ||||||||  |||| |||||||| || ||||| || ||||| |||||||||||||||||| ||||||||||    
T  47280 cacccgttataggagtaaccctcagaaacacatgatctccctcttgaaactcaagggccttcctacgcttttcatggtaactcttctgtcgactctgcga 47379  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| |||||| || |||||||| |||||    
T  47380 cgctttcatcttttctcttatcatcttgactttctccgtagtctgatgaactaaatccggtcccaacac 47448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 42483 - 42315
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| || ||||| || ||||||||||| ||||||||| || ||||||||||    
T  42483 cacccgtcataggagtaaccctcagaaatacatgatcaccctcctgaaactcaagggccttcctacgcttgtcatgataactcttcagtcgactctgcga 42384  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||| ||||||||| || |||||||| |||||||  ||||||| ||||||||| | |||||| |||||    
T  42383 cgcttccatcttttctctgatcatcttgactttctctgtagtctgatgaaccaaatacggtcccaacac 42315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 47549 - 47381
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| || ||||| || ||||||||||| ||||||||| || ||||||||||    
T  47549 cacccgtcataggagtaaccctcagaaatacatgatcaccctcctgaaactcaagggccttcctacgcttgtcatgataactcttcagtcgactctgcga 47450  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||| ||||||||| || |||||||| |||||||  ||||||| ||||||||| | |||||| |||||    
T  47449 cgcttccatcttttctctgatcatcttgactttctctgtagtctgatgaaccaaatacggtcccaacac 47381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 322860 - 323028
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||| ||||||||||||| || ||||| || ||||||||||| |||||||||||| ||||||||||    
T  322860 cacccgtcataggagtaactctcagaaatacatgatcaccctcctgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgactctgcga 322959  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| |||||||  ||||||| ||||||||| ||||| || |||||    
T  322960 cgctttcatcttctctctgatcatcttgactttctccgtagtctgatgaaccaaatccggacccaacac 323028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 117728 - 117892
Alignment:
Q  24 cgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagct 123  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||| || ||||| || ||||||||||| |||||||||||| |||| || || |||    
T  117728 cgtcataggagtaaccctcagaaatacatgatcaccctcctgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgactttgtgacgct 117827  T
Q  124 ttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    |||||||| || || |||||||| |||||||  ||||| | ||||||||| |||||||| |||||    
T  117828 ttcatcttctctctgatcatcttgactttctccgtagtatgatgaaccaaatccggtcccaacac 117892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 385975 - 386143
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||  |||||| || |||||||| | ||||||  |||| |||||||| || | |||||| |||||||||||||||||||||||| ||||||||||    
T  385975 cacccgtcgtaggagtgactctcagaaatagatgatctccctcttgaaactcaagggtctttcttcgcttgtcatggtaactcttctgtggactctgcga 386074  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| |||||||||||||| ||||  ||||||| |||||| || || ||||| |||||    
T  386075 cgctttcatcttttctcttatcatcttaaccttctccgtagtctaatgaactaaatctggtcccaacac 386143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 18687 - 18537
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||||||| ||||||||||    
T  18687 cacccgtcataggagtaactctcagaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttctgtcgactctgcga 18588  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaac 170  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| ||||||    
T  18587 tgctttcatcttttctcttatcatcttgactttctccgtagtctgatgaac 18537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 14241 - 14403
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || |||||||| ||||||||  |||| |||||||| || ||||||||  ||||||||||||||||||||||| ||||||||||    
T  14241 cacccgtcataggagtgactctcagaaacacatgatctccctcttgaaactcaagggcctttctatgcttgtcatggtaactcttctgtcgactctgcga 14340  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     |||||||||||||| ||||||||||| || ||||  ||||||| ||||||||| ||||||||    
T  14341 cgctttcatcttttctcttatcatcttgacattctccgtagtctgatgaaccaaatccggtcc 14403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 1674 - 1512
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| ||| |||| |||||||| ||| |||||||||| || ||||| || | ||||||||| |||||||||||| ||||||||||    
T  1674 cacccgtcataggagtaactctccgaaatacatgatcttccacctgaaactcaagggccttcctacacttgtcatgataactcttctgtcgactctgcga 1575  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     |||||||||||||||||||||||||| |||||||   |||||| ||||||||| ||||||||    
T  1574 cgctttcatcttttcccttatcatcttgactttctctctagtctgatgaaccaaatccggtcc 1512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 6244 - 6290
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatctt 131  Q
    ||||| |||||||||||||| ||| |||||||||| |||||||||||    
T  6244 cgcttatcatggtaactcttttgtcgactctgcgatgctttcatctt 6290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 39895 - 40057
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  ||||||||||||| ||  ||||||| |||||||||| ||||||||||||| ||||||||||    
T  39895 cacccgtcataggagtaactctcagaaatacatgatctccctcctgaaactcaaggtcctttctacgcttgtcatagtaactcttctgtcgactctgcga 39994  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     |||||||||||||| ||||| ||||| |||||||   |||||| ||||||||| ||||||||    
T  39995 cgctttcatcttttctcttataatcttgactttctcgttagtctgatgaaccaaatccggtcc 40057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 12931 - 12766
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  |||||||| |||| ||| ||||||||| ||||||||||||| || |||||||||||||| ||||||||||| |||| | |||||| |||    
T  12931 cacccgtcatcggagtaactctcaaaaatacatgatcaccctcctgaaactcaagggcctttctccgcttatcatggtaacttttctatcgactctacga 12832  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaa 185  Q
     |||||||||||||||||||||||||| || |||| ||| |||| ||||||||| || ||||||||    
T  12831 cgctttcatcttttcccttatcatcttgaccttctcagtcgtctgatgaaccaaatctggtcctaa 12766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 10233 - 10065
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||  | || || ||||||||||| || ||||| ||| ||||||||||    
T  10233 cacccgtcataggagtaaccctcagaaatacatgatcaccctcctgaaactcaaggtctttcctacgcttgtcatgatagctcttttgtcgactctgcga 10134  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| |||||||  ||||||||||||||||| |||||||| |||||    
T  10133 tgctttcatcttctctctgatcatcttgactttctctgtagtctcatgaaccaaatccggtcccaacac 10065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 17281 - 17113
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||| ||||| ||||||||| ||||||||||||| || ||||| || || |||||||| |||||||||||| ||||||||||    
T  17281 cacccgtcataggagtaaccctaagaaatacatgatcaccctcctgaaactcaagggccttcctacgtttgtcatgataactcttctgtcgactctgcga 17182  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| |||||||  ||||||| ||||| ||| |||||||| |||||    
T  17181 cgctttcatcttctctctgatcatcttgactttctctgtagtctgatgaatcaattccggtcccaacac 17113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 20139 - 20301
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || |||||||| ||||||||||| |||||||| ||| ||||||| ||    
T  20139 cacccgtcataggagtaactctcagaaatacatgatctccctcttgaaactcaagggcctttctacgcttgtcatgataactcttttgtcgactctggga 20238  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
     |||||||||||||||||||||||||| | |||||   |||||| ||||||||| ||||||||    
T  20239 cgctttcatcttttcccttatcatcttgagtttctctatagtctgatgaaccaaatccggtcc 20301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 13511 - 13343
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| || ||||| ||||||||| ||||||||||||| || ||||| || || |||||||| |||||||||||| ||||||||||    
T  13511 cacccgtcataggagtaactcttagaaatacatgatcaccctcctgaaactcaagggccttcctacgtttgtcatgataactcttctgtcgactctgcga 13412  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| |||||||  ||||||| ||||| ||| |||||||| |||||    
T  13411 cgctttcatcttctctctgatcatcttgactttctctgtagtctgatgaatcaattccggtcccaacac 13343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 549 - 381
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||| ||||| ||||||||| ||||||||||||| || ||||| || || |||||||| |||||||||||| ||||||||||    
T  549 cacccgtcataggagtaaccctaagaaatacatgatcaccctcctgaaactcaagggccttcctacgtttgtcatgataactcttctgtcgactctgcga 450  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| |||||||  ||||||| ||||| ||| |||||||| |||||    
T  449 cgctttcatcttctctctgatcatcttgactttctctgtagtctgatgaatcaattccggtcccaacac 381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 11044 - 11212
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||| ||||| ||||||||| ||||||||||||| || ||||| || || |||||||| |||||||||||| ||||||||||    
T  11044 cacccgtcataggagtaaccctaagaaatacatgatcaccctcctgaaactcaagggccttcctacgtttgtcatgataactcttctgtcgactctgcga 11143  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| || || |||||||| |||||||  ||||||| ||||| ||| |||||||| |||||    
T  11144 cgctttcatcttctctctgatcatcttgactttctctgtagtctgatgaatcaattccggtcccaacac 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 52013 - 51845
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||||||| |||||| |||    
T  52013 cacccgtcataggagtgactctcagaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttctgtcgactctacga 51914  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    ||||||||||||||| ||||||||||| || ||||  ||||| | ||||||||| |||||||| |||||    
T  51913 agctttcatcttttctcttatcatcttgaccttctccgtagtttgatgaaccaaatccggtcccaacac 51845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 2907 - 3075
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||| ||| |||||||   |||| |||||||| || |||||||| |||||||||||||||| ||||||| ||||||||||    
T  2907 cacccgtcataggagtaactctcataaatacatgatatccctcttgaaactcaagggcctttctacgcttgtcatggtaacccttctgtcgactctgcga 3006  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
      ||||||||||||||||||||||||| |||||||  || |||| ||||||||| |||||||| |||||    
T  3007 cactttcatcttttcccttatcatcttgactttctctgttgtctgatgaaccaaatccggtcccaacac 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 195852 - 195685
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||||||||| || ||||| || ||||||||||| |||||||||||| | |||| |||    
T  195852 cacccgtcataggagtaaccctcagaaaa-catgatcaccctcctgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgtctctacga 195754  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| ||  | |||||||| |||||||  ||||||| |||||||||||||||||| |||||    
T  195753 cgctttcatcttctctatgatcatcttgactttctctgtagtctgatgaaccaagtccggtcccaacac 195685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 148726 - 148894
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||| |||| |  ||||  || |||||||| || |||||||||||||||||| || ||||||||||    
T  148726 cacccgtcataggagtaactctcagaaatacatgatcaccctcttagaacttaagggcctttctacggttgtcatggtaactcttccgtcgactctgcga 148825  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||||| | |||||||   |||||| ||||||||| |||||||| |||||    
T  148826 cgctttcatcttttcccttatcatcctgactttctctatagtctgatgaaccaaatccggtcccaacac 148894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 26683 - 26542
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| ||||||||| |||| ||| || |||||  | ||||| ||||| ||  | || || ||||| |||||||||||||| ||| ||||||||||    
T  26683 caccagtcacaggagtaactctcaaaaatacgtgatctccttcctggaactcaaggtctttcctacgcttatcatggtaactcttttgtcgactctgcga 26584  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
     ||||||||||||||    ||||||||||| |||| ||||||    
T  26583 cgctttcatcttttcttgaatcatcttaaccttctcagtagt 26542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 1319 - 1152
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||||||| ||||||| ||    
T  1319 cacccgtcataggagtaactctcagaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttctgtcgactctgaga 1220  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaaca 187  Q
     |||||||||||||| ||||| ||||| || ||||  ||||||| ||||||||| |||||||| ||||    
T  1219 cgctttcatcttttctcttattatcttgaccttctccgtagtctaatgaaccaaatccggtcccaaca 1152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 91082 - 90932
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||  ||||||||| |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||||||| ||||||||||    
T  91082 cacccgtcgtaggagtaactctcagaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttctgtcgactctgcga 90983  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaac 170  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| ||||||    
T  90982 cgctttcatcttttctcttatcatcttgactttctccgtagtctgatgaac 90932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 448280 - 448356
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| || ||||||||| ||||||||||  |||||||||||||    ||||||||||| |||| ||||||    
T  448280 cgcttatcatgatagctcttctgtcgactctgcgacactttcatcttttcttgaatcatcttaaccttctcagtagt 448356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 7388 - 7220
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||| ||| || ||||||||||||||| ||||||||| ||||||||||||  || ||||| || ||||||||||| |||||||| ||| ||||||||||    
T  7388 cacccatcatagaagtaaccctcagaaatacatgatcaccctcctgaaacttaagggccttcctacgcttgtcatgataactcttatgtcgactctgcga 7289  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| || |||||||| |||||||  |||| || ||||||||| |||||||| |||||    
T  7288 tgctttcatcttttctctgatcatcttgactttctctgtagactgatgaaccaaatccggtcccaacac 7220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 76 - 195
Target Start/End: Complemental strand, 5546 - 5427
Alignment:
Q  76 gcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagt 175  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| || |||||||| |||||||   |||||||||||||||| |    
T  5546 gcctttctccgcttgtcatggtaactcttctgtcgactctgcgacgctttcatcttttctctgatcatcttgactttctctatagtctcatgaaccaaat 5447  T
Q  176 ccggtcctaacaccaaactc 195  Q
    ||||||| ||||||| ||||    
T  5446 ccggtcccaacaccacactc 5427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 190
Target Start/End: Complemental strand, 1279 - 1129
Alignment:
Q  40 ctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttccctta 139  Q
    |||||||| ||||||||  |||| |||||||| || ||||| || ||||||||||||||||| |||||| |||||||||| |||||||||||||| ||||    
T  1279 ctcagaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcatggtaacttttctgtcgactctgcgacgctttcatcttttctctta 1180  T
Q  140 tcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
    ||||||| |||||||| ||||||| |||||| || || ||||| |||||||    
T  1179 tcatcttgactttcttcgtagtctgatgaactaaatctggtcccaacacca 1129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 27675 - 27843
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| ||||||||| |||||||| ||||||||  ||||||||||||| || ||||| || ||||||||||| |||||||||||| ||||||||||    
T  27675 cacctgtcataggagtaactctcagaaacacatgatctccctcctgaaactcaagggccttcctacgcttgtcatgataactcttctgtcgactctgcga 27774  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||||||  | |||||||| |||||||  ||||||| ||||||| | || ||||| |||||    
T  27775 cgctttcatcttttctttgatcatcttgactttctctgtagtctgatgaaccgaatctggtcccaacac 27843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 4047 - 4215
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  | || |||||||| || ||||| || |||||||||||||||||||| ||| |||||| |||    
T  4047 cacccgtcataggagtaactctcagaaacacatgatctccatcttgaaactcaagggccttcctacgcttgtcatggtaactcttatgtcgactctacga 4146  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| || ||| || |||||||| |||||    
T  4147 cgctttcatcttttctcttatcatcttgactttctccgtagtctgataaactaaatccggtcccaacac 4215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 26 - 194
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || |||||||| ||||||||  |||| |||||||| || ||||| || |||||||||||||||||||||||  ||||||  ||    
T  26 cacccgtcataggagtgactctcagaaacacatgatctccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttctgccgactctatga 125  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| || ||||  ||||||| ||||||||| |||||||| |||||    
T  126 cgctttcatcttttctcttatcatcttgaccttctccgtagtctgatgaaccaaatccggtcccaacac 194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 1384 - 1216
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||||||||| ||| | ||||||||||| ||  | || || ||||||||||| || ||||| |||  |||||||||    
T  1384 cacccgtcataggagtaaccctcagaaaaacatggtcaccttcctgaaactcaaggtctttcctacgcttgtcatgatagctcttttgtcaactctgcga 1285  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| ||||| |||||||| |||||||  ||||||||||||||||| ||||| || |||||    
T  1284 cgctttcatcttctccctaatcatcttgactttctccgtagtctcatgaaccaaatccggccccaacac 1216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 14401 - 14233
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||| |||||| || ||||| || ||||| ||||| |||||||||||| ||||||||||    
T  14401 cacccgtcataggagtaaccctcagaaatacatgatcaccctcctaaaactcaagggccttcctacgcttatcatgataactcttctgtcgactctgcga 14302  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||||||  | |||||||| ||| |||   |||||| || |||||| |||||||| |||||    
T  14301 cgctttcatcttttctttgatcatcttgactatctctatagtctgataaaccaaatccggtcccaacac 14233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 26298 - 26466
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| || |||| ||| ||||||||  |||| |||||||| || |||||||| ||||||| |||||||||||||||| ||||||||||    
T  26298 cacccgtcataggagtgactctcaaaaacacatgatctccctcttgaaactcaagggcctttctacgcttgtaatggtaactcttctgtcgactctgcga 26397  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||| |||||||| ||||||||||| || ||||  ||||||| ||||||||| |||| ||| |||||    
T  26398 cgctttgatcttttctcttatcatcttgaccttctccgtagtctgatgaaccaaatccgctcccaacac 26466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 57966 - 57799
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||||||  |||||||| |||| ||| ||||||||| ||| ||||||||| || |||||||||||||| ||||||||||| || |||  |||||||||    
T  57966 cacccgtcatcggagtaactctcaaaaatacatgatcacccttctgaaactcaagggcctttctccgcttatcatggtaactttt-tgtcaactctgcga 57868  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||||||||||||||| ||  ||| ||| |||| ||||||||| |||||||| |||||    
T  57867 cgctttcatcttttcccttatcatcttgaccctctcagtcgtctgatgaaccaaatccggtcccaacac 57799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 49163 - 49021
Alignment:
Q  40 ctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttccctta 139  Q
    |||||||| |||||||   |||| |||||||| || ||||| || |||||||||||||||||||||| | |||||||||| |||||||||||||| ||||    
T  49163 ctcagaaacacatgatttccctcttgaaactcaagggccttcctacgcttgtcatggtaactcttctatcgactctgcgatgctttcatcttttctctta 49064  T
Q  140 tcatcttaactttcttagtagtctcatgaaccaagtccggtcc 182  Q
    ||||||| || ||||  ||||||| ||||||||| ||| ||||    
T  49063 tcatcttgaccttctccgtagtctgatgaaccaaatccagtcc 49021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 37414 - 37526
Alignment:
Q  76 gcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagt 175  Q
    ||||| || |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||  ||||||| ||||||||| |    
T  37414 gccttcctacgcttgtcatggtaactcttctgtcgactctgcgacgctttcatcttttctcttatcatcttaactttctccgtagtctgatgaaccaaat 37513  T
Q  176 ccggtcctaacac 188  Q
    ||||||| |||||    
T  37514 ccggtcccaacac 37526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 38324 - 38156
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || ||||| || |||||||| ||||||||||||||| ||||||||||    
T  38324 cacccgtcataggagtaactctcagaaatacatgatctccctcttgaaactcaagggccttcctacgcttgtcttggtaactcttctgtcgactctgcga 38225  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||| ||||||||| || |||||||| |||||||  ||||||| ||||  ||| |||||||| |||||    
T  38224 cgcttccatcttttctctaatcatcttgactttctccgtagtctgatgattcaaatccggtcccaacac 38156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 27487 - 27373
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||| |||||||| || ||||| || |||||||| ||||||||||||||| ||||||||||    
T  27487 cacccgtcataggagtaactctcagaaatacatgatctccctcttgaaactcaagggccttcctacgcttgtcgtggtaactcttctgtcgactctgcga 27388  T
Q  120 agctttcatcttttc 134  Q
     |||| |||||||||    
T  27387 cgcttccatcttttc 27373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 5152 - 5026
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||| |  |||||||| ||||||||  |||| |||||||| || |||||||| |||||||||||||||||||||||| ||||||||||    
T  5152 cacccgtcataggagtgattctcagaaacacatgatctccctcttgaaactcaagggcctttctacgcttgtcatggtaactcttctgtcgactctgcga 5053  T
Q  120 agctttcatcttttcccttatcatctt 146  Q
     |||||||||||||| |||||||||||    
T  5052 cgctttcatcttttctcttatcatctt 5026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 6339 - 6508
Alignment:
Q  20 cacccgtcaaaggagtaaccctcag-aaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcg 118  Q
    ||||||||| ||||||||||||||| ||||||||| ||| | ||||||||||| ||  | || || ||||||||||| || ||||| ||| |||||||||    
T  6339 cacccgtcataggagtaaccctcaggaaaaacatggtcaccttcctgaaactcaaggtctttcctacgcttgtcatgatagctcttttgtcgactctgcg 6438  T
Q  119 aagctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    | ||||||||||| ||  | |||||||| ||||||| |||||||||||||||||| |||||||| |||||    
T  6439 acgctttcatcttctctatgatcatcttgactttctcagtagtctcatgaaccaaatccggtcccaacac 6508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 31566 - 31734
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| || |||||| |||||||| |||||||   |||| |||||||| || ||||| || ||||||||||||||||| |||||| ||||||||||    
T  31566 cacccgtcatagaagtaactctcagaaacacatgatatccctcttgaaactcaagggccttcctacgcttgtcatggtaactattctgtcgactctgcga 31665  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| || |||||||| |||||||  ||||| | ||||||||| |||| ||| |||||    
T  31666 cgctttcatcttttctctgatcatcttgactttctatgtagtttgatgaaccaaatccgatcccaacac 31734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 14260 - 14336
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||| ||    ||||||||||| ||||| |||||    
T  14260 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttctcttgaatcatcttaaccttcttggtagt 14336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 17653 - 17741
Alignment:
Q  75 tgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    |||||| || ||||| ||||  |||| ||| ||| |||||||||| |||||||| || ||    |||||||||||||||||||||||||    
T  17653 tgccttcctacgcttatcattataacacttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttcttagtagtct 17741  T

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Target: scaffold0029 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 96152 - 95984
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||| ||||||||| ||| | |||||||| || ||  | || || ||||||||||| || ||||| ||| ||||||||||    
T  96152 cacccgtcataggagtaaccctcaaaaaaacatggtcaccttcctgaaattcaaggtctttcctacgcttgtcatgatagctcttttgtcgactctgcga 96053  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     ||||||||||| ||||| |||| | |||||||||  ||||||||||||||||||||||| || |||||    
T  96052 cgctttcatcttctccctgatcaccctaactttctccgtagtctcatgaaccaagtccggccccaacac 95984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 112715 - 112837
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || ||||  || ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||    
T  112715 cacctgtcataggagtgactctcaagaacacatgatctccctcttgaaactcaagatccttcctacgcttgtcatgatagctcttctgtcgactctgcga 112814  T
Q  120 agctttcatcttttcccttatca 142  Q
     |||||||||| ||| |||||||    
T  112815 cgctttcatctgttctcttatca 112837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 109920 - 109820
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | ||||| ||||| ||||| |||||||||||| |||||||||| |||||||| || ||    ||||||| |||||||| |||||    
T  109920 tcctgaaactcaagatcttttctacgcttatcatgataactcttctgtcgactctgcgacgctttcattttctcttggatcatctgaactttctcagtag 109821  T
Q  161 t 161  Q
    |    
T  109820 t 109820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 6064 - 5942
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    ||||||||| |||||||||||||||||| |||||| |  |||| |||||||| || |||||||| |||||||||||||||||||| ||| ||||||||||    
T  6064 cacccgtcataggagtaaccctcagaaacacatgagctccctcttgaaactcaagggcctttctacgcttgtcatggtaactcttttgtcgactctgcga 5965  T
Q  120 agctttcatcttttcccttatca 142  Q
      ||||||||||||| |||||||    
T  5964 cactttcatcttttctcttatca 5942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 3489 - 3337
Alignment:
Q  36 aaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcc 135  Q
    |||||||||||| ||||||||| |||||||||||   || ||||| || || || ||| | |||||||||||| |||||||||| ||||||||||| ||     
T  3489 aaccctcagaaatacatgatcaccctcctgaaacaaaagggccttcctacgtttatcacgataactcttctgtcgactctgcgacgctttcatcttctct 3390  T
Q  136 cttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
    || ||||||||||||||||  ||||||| ||||||||| |||| ||| |||||    
T  3389 ctgatcatcttaactttctctgtagtctgatgaaccaaatccgttcccaacac 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 27382 - 27549
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||| || ||||||||| |||||||| |||||||   |||| ||||| || || ||||| || |||| ||||||||||||||||||| |||||| ||     
T  27382 cacccgacataggagtaactctcagaaatacatgatatccctcttgaaattcaag-gccttcctacgctcgtcatggtaactcttctgtcgactctacgg 27480  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| || ||||| |||||    
T  27481 cgctttcatcttttctcttatcatcttgactttctccgtagtctgatgaaccaaatctggtcccaacac 27549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 7186 - 7064
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||||||||||||||| ||||||||  |||| ||| |||| || || ||||| ||||||||||| |||||||||||| ||||||||||    
T  7186 cacctgtcataggagtaaccctcagaaacacatgatctccctcttgacactcaagggcttttctacgcttgtcatgataactcttctgtcgactctgcga 7087  T
Q  120 agctttcatcttttcccttatca 142  Q
     |||||||| ||||| |||||||    
T  7086 cgctttcatattttctcttatca 7064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 9954 - 10119
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||||| || ||||||||| |||||||| ||||||||  |||| ||||||||  || |     | |||||||||||||||||||||||| ||||||||||    
T  9954 cacccgccataggagtaactctcagaaacacatgatctccctcttgaaactcacgtcc-----tacgcttgtcatggtaactcttctgtcgactctgcga 10048  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacacca 190  Q
     |||||||||||||| ||||||||||| || ||||  ||||||| |||||| || || ||||| |||||||    
T  10049 cgctttcatcttttctcttatcatcttgaccttctccgtagtctgatgaactaaatctggtcccaacacca 10119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 146
Target Start/End: Original strand, 348 - 473
Alignment:
Q  21 acccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaa 120  Q
    |||||||| |||||||||||||||||||||||| ||| ||||||||||||| ||  | || || ||||||||||| || ||||| ||| ||||||||||     
T  348 acccgtcataggagtaaccctcagaaaaacatggtcaccctcctgaaactcaaggtctttcctacgcttgtcatgatagctcttttgtcgactctgcgac 447  T
Q  121 gctttcatcttttcccttatcatctt 146  Q
    ||||||||||| || || ||||||||    
T  448 gctttcatcttctctctgatcatctt 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 85 - 213
Alignment:
Q  60 ctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagta 159  Q
    ||||| |||||| || ||||| || |||||||||||||||||||||||| |||||| ||| ||||||||||| || || |||||||| |||||||  |||    
T  85 ctcctaaaactcaagggccttcctacgcttgtcatggtaactcttctgtcgactctacgatgctttcatcttctctctgatcatcttgactttctctgta 184  T
Q  160 gtctcatgaaccaagtccggtcctaacac 188  Q
    |||| ||||||||| || ||||| |||||    
T  185 gtctgatgaaccaaatctggtcccaacac 213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 4031 - 4199
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| ||  ||||||| ||||||||  |||| |||||||| ||  | || || |||||||||||||||||||||||| || ||| |||    
T  4031 cacctgtcataggagtgactatcagaaacacatgatctccctcttgaaactcaaggactttcctacgcttgtcatggtaactcttctgtcgattctccga 4130  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacac 188  Q
     |||||||||||||| ||||||||||| || ||||  ||||||| |||||| || || ||||| |||||    
T  4131 cgctttcatcttttctcttatcatcttgaccttctccgtagtctgatgaactaaatctggtcccaacac 4199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 1950 - 2076
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || |||||||| ||||||||  |||| |||||||| || ||||| ||  ||||||||||||||||||| ||| |||||||||     
T  1950 cacctgtcataggagtgactctcagaaacacatgatctccctcttgaaactcaagggccttcctatgcttgtcatggtaactcttttgtcgactctgcgt 2049  T
Q  120 agctttcatcttttcccttatcatctt 146  Q
     ||||||| |||||| |||||||||||    
T  2050 cgctttcaccttttctcttatcatctt 2076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 180384 - 180516
Alignment:
Q  31 ggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatct 130  Q
    |||||||| |||| ||| ||||||||| |||| |||||||| ||  ||||||| ||||| ||||| |||||||| ||| |||||||||| ||||||||||    
T  180384 ggagtaactctcaaaaacacatgatcaccctcttgaaactcaagatcctttctacgcttatcatgataactcttttgtcgactctgcgacgctttcatct 180483  T
Q  131 tttcccttatcatcttaactttcttagtagtct 163  Q
    | ||    |||||||||||||||| | ||||||    
T  180484 tctcttgaatcatcttaactttctcaatagtct 180516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 898 - 973
Alignment:
Q  86 gcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||||||    |||||||||||||||| ||||||    
T  898 gcttatcatgataactcttttgttgactctgcgacgctttcatcttttcttgaatcatcttaactttctcagtagt 973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 15713 - 15789
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| |||||||||||||| ||| |||||||||| ||||||||||||||    ||||| |||||||||| ||||||    
T  15713 cgcttatcatggtaactcttttgtcgactctgcgacgctttcatcttttcttgaatcattttaactttctcagtagt 15789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 15876 - 15952
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| |||||||||||||| ||| |||||||||| ||||||||||||||    ||||| |||||||||| ||||||    
T  15876 cgcttatcatggtaactcttttgtcgactctgcgacgctttcatcttttcttgaatcattttaactttctcagtagt 15952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 19070 - 19133
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaa 148  Q
    ||||||||||| || |||||||||||||||||||| |||||||||| |||  |||||| |||||    
T  19070 cgcttgtcatgatagctcttctgttgactctgcgacgctttcatctgttcttttatcaacttaa 19133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 23232 - 23295
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaa 148  Q
    ||||||||||| || |||||||||||||||||||| |||||||||| |||  |||||| |||||    
T  23232 cgcttgtcatgatagctcttctgttgactctgcgacgctttcatctgttcttttatcaacttaa 23295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 28875 - 28808
Alignment:
Q  64 tgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatctt 131  Q
    |||||||| ||  ||||||| ||||||||||| |||||||||||| |||| ||||| |||||||||||    
T  28875 tgaaactcaaggtcctttctacgcttgtcatgataactcttctgtcgactttgcgatgctttcatctt 28808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 40866 - 40799
Alignment:
Q  64 tgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatctt 131  Q
    |||||||| ||  ||||||| ||||||||||| |||||||||||| |||| ||||| |||||||||||    
T  40866 tgaaactcaaggtcctttctacgcttgtcatgataactcttctgtcgactttgcgatgctttcatctt 40799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 9126 - 9240
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || |||| ||| ||||||||  | || |||||||| ||  | || || ||||| |||||||||||||| ||| ||||||||||    
T  9126 caccggtcacaggagtgactctcaaaaatacatgatccccttcttgaaactcaaggtctttcctacgcttatcatggtaactcttttgtcgactctgcga 9225  T
Q  120 agctttcatcttttc 134  Q
     ||||||||||||||    
T  9226 cgctttcatcttttc 9240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 14557 - 14659
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  |||| || ||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    |||||||||||||||| |||||    
T  14557 tcctgaaactcaagatccttcctgcgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttctcagtag 14656  T
Q  161 tct 163  Q
    |||    
T  14657 tct 14659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.00000000007; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 229270 - 229340
Alignment:
Q  91 tcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||    ||||||||||| |||| ||||||    
T  229270 tcatggtaactcttttgtcgactctgcgacgctttcatcttttcttgaatcatcttaaccttctcagtagt 229340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 219567 - 219426
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || |||| ||| || ||||| || || |||||||| ||  | || || ||||| ||||| |||||||| ||| ||||||||||    
T  219567 caccagtcacaggagtgactctcaaaaatacgtgatcttcttcttgaaactcaaggtctttcctacgcttatcatgataactcttttgtcgactctgcga 219468  T
Q  120 agctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
     ||||||||||| ||    ||||||||||| |||| ||||||    
T  219467 cgctttcatcttctcttgaatcatcttaaccttctcagtagt 219426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 33088 - 33016
Alignment:
Q  77 cctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaac 149  Q
    ||||||||| ||| ||||| ||||||||||||  |||||| || || ||||||||||||   |||||||||||    
T  33088 cctttctcctcttatcatgataactcttctgtctactctgagacgccttcatcttttcctgaatcatcttaac 33016  T

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Target: scaffold0130 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 10832 - 10767
Alignment:
Q  77 cctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatca 142  Q
    ||||||| | ||||||||| |||||||| ||| |||||||||| ||||||||||| || |||||||    
T  10832 cctttctacacttgtcatgataactcttttgtcgactctgcgacgctttcatcttctctcttatca 10767  T

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Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 33827 - 33718
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || ||||  || ||||||||  |||| |||||||| ||  |||| || ||||||||||| || ||||||||| ||||||||||    
T  33827 cacctgtcataggagtgactctcaagaacacatgatctccctcttgaaactcaaggtccttcctacgcttgtcatgatagctcttctgtcgactctgcga 33728  T
Q  120 agctttcatc 129  Q
     |||||||||    
T  33727 cgctttcatc 33718  T

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Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 4539 - 4490
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttc 134  Q
    ||||| |||||||||||||| ||| |||||||||| ||||||||||||||    
T  4539 cgcttatcatggtaactcttttgtcgactctgcgacgctttcatcttttc 4490  T

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Target: scaffold0692 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 3996 - 3896
Alignment:
Q  49 acatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaa 148  Q
    |||||||||||  |||||||||| |   ||||||||| ||| ||||| ||||||||||||  |||||| || ||||||||||| |||   ||||||||||    
T  3996 acatgatcatcaacctgaaactcaatatcctttctcctcttatcatgataactcttctgtctactctgagacgctttcatcttctcctgaatcatcttaa 3897  T
Q  149 c 149  Q
    |    
T  3896 c 3896  T

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Target: scaffold0574 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 4289 - 4217
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtc 92  Q
    ||||||||| ||||||||| || | ||| ||||||||  |||| |||||||| || |||||||||||||||||    
T  4289 cacccgtcataggagtaactcttaaaaacacatgatccccctcttgaaactcaagggcctttctccgcttgtc 4217  T

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Target: scaffold0396 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 4253 - 4329
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| |||| ||||||||| ||| |||||||||| ||||||||||||||    ||||||||||| |||| ||||||    
T  4253 cgcttatcatagtaactcttttgtcgactctgcgacgctttcatcttttcttggatcatcttaaccttctcagtagt 4329  T

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Target: scaffold0379 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 13062 - 12986
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    ||||||| |||||||| ||||||    
T  13062 cgcttatcatgataactcttttgtcgactctgcgacgctttcatcttttcttggatcatctaaactttctcagtagt 12986  T

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Target: scaffold0739 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 178 - 269
Alignment:
Q  40 ctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatctt 131  Q
    |||| ||| ||||||| | |||| |||||||| ||  ||||||| || || ||||| |||||||| ||| |||||||||| |||||||||||    
T  178 ctcaaaaacacatgataaccctcttgaaactcaagatcctttctacggttatcatgataactcttttgtcgactctgcgacgctttcatctt 269  T

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Target: scaffold0447 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 10511 - 10622
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| ||||||||| | ||||||| ||| ||||||||| |  | |||||||| |   ||||||||| ||| ||||| ||||||||||||  |||||| ||    
T  10511 caccggtcaaaggattcaccctcaaaaacacatgatcaccaacttgaaactcaatatcctttctcctcttatcatgataactcttctgtctactctgaga 10610  T
Q  120 agctttcatctt 131  Q
     |||||||||||    
T  10611 cgctttcatctt 10622  T

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Target: scaffold0375 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 3810 - 3735
Alignment:
Q  79 tttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttct 154  Q
    ||||| ||||| ||||| |||||||| ||| |||||||||| ||||||||||| ||    ||||||||||||||||    
T  3810 tttctacgcttatcatgataactcttttgtcgactctgcgacgctttcatcttctcttgaatcatcttaactttct 3735  T

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Target: scaffold0091 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 7987 - 8089
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | || || ||||| ||||| |||||||||||| |||||||||| |||||||| || ||    ||||||||||| |||| |||||    
T  7987 tcctgaaactcaagatctttcctacgcttatcatgataactcttctgtcgactctgcgacgctttcattttctcttgaatcatcttaaccttctcagtag 8086  T
Q  161 tct 163  Q
    |||    
T  8087 tct 8089  T

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Target: scaffold0042 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 65626 - 65704
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagtct 163  Q
    ||||| ||||| |||||||| ||| |||||||||| |||||||| || ||    |||||||||||||||| ||||||||    
T  65626 cgcttatcatgataactcttttgtcgactctgcgacgctttcattttctcttgaatcatcttaactttctcagtagtct 65704  T

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Target: scaffold0411 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 15188 - 15115
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttc 134  Q
    ||||||||||| ||  | || || ||||| ||||| |||||||| ||| |||||||||| ||||||||||||||    
T  15188 tcctgaaactcaaggtctttcctacgcttatcatgataactcttttgtcgactctgcgatgctttcatcttttc 15115  T

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Target: scaffold0138 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 16615 - 16502
Alignment:
Q  20 cacccgtcaaaggagtaaccctcagaaaaacatgatcatcctcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcga 119  Q
    |||| |||| |||||| || |||| ||| || |||||  |||| |||||||| ||  | || || ||||| |||||||||||||| |||  |||||||||    
T  16615 caccagtcacaggagtgactctcaaaaatacgtgatctccctcttgaaactcaaggtctttcctacgcttatcatggtaactcttttgtcaactctgcga 16516  T
Q  120 agctttcatctttt 133  Q
     |||||||||||||    
T  16515 cgctttcatctttt 16502  T

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Target: scaffold0676 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 6247 - 6311
Alignment:
Q  97 taactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    |||||||| ||| |||||||||| ||||||||||| ||    |||||||||||||||| ||||||    
T  6247 taactcttttgtcgactctgcgacgctttcatcttctcttgaatcatcttaactttctcagtagt 6311  T

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Target: scaffold0282 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 16501 - 16425
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| || ||||||| ||||||||||||||    ||||||||||| |||| ||||||    
T  16501 cgcttatcatgataactcttttgtcgagtctgcgacgctttcatcttttcttgaatcatcttaaccttctcagtagt 16425  T

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Target: scaffold0244 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 26250 - 26178
Alignment:
Q  77 cctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaac 149  Q
    ||||||||| ||| ||||| ||||||||||||  |||||| || || ||||||||||||   |||||||||||    
T  26250 cctttctcctcttatcatgataactcttctgtctactctgagacgccttcatcttttcctgaatcatcttaac 26178  T

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Target: scaffold0225 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 23607 - 23679
Alignment:
Q  77 cctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaac 149  Q
    ||||||||| ||| ||||| ||||||||||||  |||||| || ||||||||||| |||   |||||||||||    
T  23607 cctttctcctcttatcatgataactcttctgtctactctgagacgctttcatcttctcctgaatcatcttaac 23679  T

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Target: scaffold0213 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 6368 - 6312
Alignment:
Q  139 atcatcttaactttcttagtagtctcatgaaccaagtccggtcctaacaccaaactc 195  Q
    |||||||| ||||| |  ||||||||||||||||| |||||||| ||||||| ||||    
T  6368 atcatcttgactttttctgtagtctcatgaaccaaatccggtcccaacaccacactc 6312  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 32837 - 32761
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| ||| || ||| ||||||||||||||    ||||||||||| |||||||||||    
T  32837 cgcttatcatgataactcttttgtcgaccctacgatgctttcatcttttcttgaatcatcttaaccttcttagtagt 32761  T

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Target: scaffold0074 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 3361 - 3437
Alignment:
Q  85 cgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtagt 161  Q
    ||||| ||||| |||||||| ||| |||||||| | ||||||||||||||    ||||||||||| |||| ||||||    
T  3361 cgcttatcatgataactcttttgtcgactctgcaacgctttcatcttttcttggatcatcttaaccttctcagtagt 3437  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 43351 - 43451
Alignment:
Q  61 tcctgaaactctagtgcctttctccgcttgtcatggtaactcttctgttgactctgcgaagctttcatcttttcccttatcatcttaactttcttagtag 160  Q
    ||||||||||| ||  | ||||| | ||| |||||||||||||| ||| |||| ||||| |||||||| || ||    |||||||||||||||| |||||    
T  43351 tcctgaaactcaagatcttttctgcacttatcatggtaactcttttgtcgactttgcgacgctttcattttctcttgaatcatcttaactttctcagtag 43450  T
Q  161 t 161  Q
    |    
T  43451 t 43451  T

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