View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6876A_low_5 (Length: 595)

Name: NF6876A_low_5
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6876A_low_5
NF6876A_low_5
[»] chr2 (67 HSPs)
chr2 (14-309)||(179448-179743)
chr2 (537-595)||(1415807-1415865)
chr2 (537-595)||(5427661-5427719)
chr2 (537-595)||(31788706-31788764)
chr2 (538-595)||(31193129-31193186)
chr2 (538-595)||(38445416-38445473)
chr2 (537-595)||(36942914-36942972)
chr2 (538-595)||(36692124-36692181)
chr2 (537-592)||(4041386-4041441)
chr2 (540-595)||(11985028-11985083)
chr2 (537-592)||(18763721-18763776)
chr2 (537-592)||(33923958-33924013)
chr2 (541-595)||(1421925-1421979)
chr2 (537-595)||(4779003-4779061)
chr2 (537-595)||(33585527-33585585)
chr2 (537-595)||(37876398-37876456)
chr2 (540-595)||(12677246-12677301)
chr2 (537-591)||(12553961-12554015)
chr2 (538-584)||(30923250-30923296)
chr2 (538-591)||(14416420-14416473)
chr2 (538-595)||(25508861-25508918)
chr2 (537-586)||(32448409-32448458)
chr2 (539-592)||(35220581-35220634)
chr2 (537-584)||(4193097-4193144)
chr2 (537-584)||(7646739-7646786)
chr2 (537-584)||(9374337-9374384)
chr2 (537-584)||(25087295-25087342)
chr2 (540-595)||(29173512-29173567)
chr2 (537-584)||(31580429-31580476)
chr2 (537-584)||(36234258-36234305)
chr2 (538-584)||(4228383-4228429)
chr2 (538-584)||(21570183-21570229)
chr2 (537-583)||(32913489-32913535)
chr2 (537-586)||(37994542-37994591)
chr2 (540-584)||(38575263-38575307)
chr2 (537-572)||(2808247-2808282)
chr2 (537-584)||(3725440-3725487)
chr2 (537-584)||(7015485-7015532)
chr2 (537-584)||(8806126-8806173)
chr2 (537-584)||(8971402-8971449)
chr2 (537-584)||(9986116-9986163)
chr2 (537-572)||(22422000-22422035)
chr2 (537-572)||(27248925-27248960)
chr2 (538-584)||(459051-459097)
chr2 (540-582)||(4100593-4100635)
chr2 (538-584)||(4903938-4903984)
chr2 (541-583)||(8308356-8308398)
chr2 (537-591)||(14955794-14955848)
chr2 (540-586)||(17248943-17248989)
chr2 (538-591)||(33759977-33760028)
chr2 (537-583)||(34600475-34600521)
chr2 (537-579)||(41328005-41328047)
chr2 (547-584)||(11550340-11550377)
chr2 (538-591)||(36175305-36175358)
chr2 (537-582)||(41431290-41431335)
chr2 (547-583)||(4878408-4878444)
chr2 (546-582)||(8809544-8809580)
chr2 (547-583)||(12366272-12366308)
chr2 (547-583)||(15920278-15920314)
chr2 (547-583)||(18141155-18141191)
chr2 (537-569)||(26025270-26025302)
chr2 (540-584)||(28037345-28037389)
chr2 (540-588)||(30399824-30399872)
chr2 (540-584)||(30420929-30420973)
chr2 (537-581)||(37613900-37613944)
chr2 (547-591)||(40125782-40125825)
chr2 (540-584)||(40625834-40625878)
[»] chr6 (36 HSPs)
chr6 (537-595)||(606445-606503)
chr6 (537-595)||(32327011-32327069)
chr6 (538-595)||(12170709-12170766)
chr6 (537-595)||(3913365-3913423)
chr6 (537-595)||(9341442-9341500)
chr6 (540-595)||(21426480-21426535)
chr6 (537-595)||(14174862-14174920)
chr6 (537-595)||(14179398-14179456)
chr6 (537-595)||(33052959-33053017)
chr6 (537-588)||(7514994-7515045)
chr6 (537-595)||(67792-67850)
chr6 (537-595)||(29319668-29319726)
chr6 (537-584)||(8497224-8497271)
chr6 (537-584)||(23947091-23947138)
chr6 (540-595)||(30894839-30894894)
chr6 (537-587)||(31851672-31851722)
chr6 (538-587)||(34185486-34185535)
chr6 (539-591)||(679364-679416)
chr6 (540-584)||(7880879-7880923)
chr6 (555-595)||(23128859-23128899)
chr6 (555-595)||(30608324-30608364)
chr6 (538-586)||(31297069-31297117)
chr6 (537-593)||(32060119-32060175)
chr6 (537-584)||(4984341-4984388)
chr6 (537-572)||(7028123-7028158)
chr6 (537-584)||(12653200-12653247)
chr6 (537-584)||(17237060-17237107)
chr6 (537-584)||(25064492-25064539)
chr6 (537-584)||(28634887-28634934)
chr6 (540-595)||(34018801-34018856)
chr6 (540-582)||(34489459-34489501)
chr6 (537-582)||(8027892-8027937)
chr6 (538-574)||(1450528-1450564)
chr6 (540-584)||(7875821-7875865)
chr6 (540-584)||(11321338-11321382)
chr6 (555-591)||(29744480-29744516)
[»] chr4 (53 HSPs)
chr4 (537-595)||(13634375-13634433)
chr4 (537-595)||(19853303-19853361)
chr4 (537-595)||(21686033-21686091)
chr4 (538-595)||(26633463-26633520)
chr4 (538-595)||(56040438-56040495)
chr4 (537-595)||(4142555-4142613)
chr4 (537-595)||(32766774-32766832)
chr4 (538-595)||(2521039-2521096)
chr4 (537-595)||(10258692-10258750)
chr4 (537-595)||(17949114-17949172)
chr4 (537-595)||(17952966-17953024)
chr4 (538-595)||(22611450-22611507)
chr4 (555-595)||(24098878-24098918)
chr4 (555-595)||(48257441-48257481)
chr4 (537-591)||(6155000-6155054)
chr4 (537-586)||(47320204-47320253)
chr4 (540-592)||(43510459-43510511)
chr4 (537-584)||(2115362-2115409)
chr4 (537-584)||(9284179-9284226)
chr4 (537-584)||(9528651-9528698)
chr4 (537-584)||(20569525-20569572)
chr4 (537-584)||(25274151-25274198)
chr4 (545-584)||(32952540-32952579)
chr4 (541-584)||(46990909-46990952)
chr4 (537-592)||(53444382-53444437)
chr4 (537-591)||(36161986-36162040)
chr4 (537-595)||(44596919-44596977)
chr4 (538-584)||(53616425-53616471)
chr4 (538-591)||(40065986-40066039)
chr4 (537-582)||(53811291-53811336)
chr4 (539-591)||(43853718-43853770)
chr4 (537-584)||(3335938-3335985)
chr4 (537-584)||(4644126-4644173)
chr4 (537-584)||(10359323-10359370)
chr4 (537-584)||(12265729-12265776)
chr4 (537-584)||(12493603-12493650)
chr4 (537-584)||(38706484-38706531)
chr4 (537-584)||(52097690-52097737)
chr4 (538-588)||(56156440-56156491)
chr4 (538-584)||(8670750-8670796)
chr4 (538-595)||(21662697-21662754)
chr4 (538-595)||(21671461-21671518)
chr4 (538-591)||(37465748-37465801)
chr4 (14-71)||(45440000-45440057)
chr4 (538-595)||(52979004-52979061)
chr4 (537-581)||(10389528-10389572)
chr4 (547-583)||(24100558-24100594)
chr4 (537-581)||(34024212-34024256)
chr4 (538-595)||(35348567-35348626)
chr4 (547-583)||(38943817-38943853)
chr4 (547-583)||(44374949-44374985)
chr4 (540-584)||(45227818-45227862)
chr4 (547-583)||(56236491-56236527)
[»] chr3 (58 HSPs)
chr3 (537-595)||(21533600-21533658)
chr3 (537-595)||(43017127-43017185)
chr3 (539-592)||(48650527-48650580)
chr3 (540-595)||(45568239-45568294)
chr3 (537-595)||(6954487-6954545)
chr3 (537-595)||(9797325-9797383)
chr3 (537-595)||(47041839-47041897)
chr3 (537-595)||(52922908-52922966)
chr3 (538-595)||(40487564-40487621)
chr3 (538-595)||(46304313-46304370)
chr3 (537-595)||(10108475-10108533)
chr3 (537-595)||(10233309-10233367)
chr3 (537-587)||(20464756-20464806)
chr3 (537-595)||(36910557-36910615)
chr3 (541-595)||(43488386-43488440)
chr3 (538-595)||(9998706-9998763)
chr3 (537-594)||(21431855-21431912)
chr3 (538-595)||(54149230-54149287)
chr3 (537-595)||(4711721-4711779)
chr3 (537-595)||(10229715-10229773)
chr3 (537-595)||(33580119-33580177)
chr3 (537-595)||(38546038-38546096)
chr3 (538-595)||(44959767-44959822)
chr3 (537-594)||(21313276-21313333)
chr3 (558-595)||(38859943-38859980)
chr3 (538-595)||(40556941-40556998)
chr3 (540-592)||(37041010-37041062)
chr3 (537-584)||(628715-628762)
chr3 (540-591)||(3085085-3085136)
chr3 (537-584)||(4178818-4178865)
chr3 (538-593)||(23799740-23799794)
chr3 (537-584)||(25162689-25162736)
chr3 (537-583)||(2342702-2342748)
chr3 (538-584)||(32607722-32607768)
chr3 (537-595)||(47896390-47896448)
chr3 (537-586)||(53807650-53807699)
chr3 (538-582)||(29503716-29503760)
chr3 (537-584)||(12116351-12116398)
chr3 (537-584)||(25631300-25631347)
chr3 (537-584)||(36906375-36906422)
chr3 (537-572)||(38854813-38854848)
chr3 (538-584)||(24396291-24396337)
chr3 (538-584)||(25850051-25850097)
chr3 (537-583)||(33076689-33076734)
chr3 (538-572)||(44907174-44907208)
chr3 (538-572)||(50611193-50611227)
chr3 (538-591)||(14859738-14859791)
chr3 (558-595)||(36461249-36461286)
chr3 (537-582)||(51202038-51202083)
chr3 (538-591)||(53508476-53508529)
chr3 (555-595)||(7448723-7448763)
chr3 (555-595)||(7456865-7456905)
chr3 (537-569)||(17238073-17238105)
chr3 (547-583)||(36623931-36623967)
chr3 (540-584)||(38440368-38440412)
chr3 (538-586)||(41818474-41818522)
chr3 (538-574)||(46178831-46178867)
chr3 (538-586)||(50194128-50194176)
[»] chr1 (59 HSPs)
chr1 (386-439)||(21695315-21695368)
chr1 (538-595)||(11462274-11462331)
chr1 (537-595)||(26535579-26535637)
chr1 (537-595)||(44915882-44915940)
chr1 (537-595)||(49504386-49504444)
chr1 (538-595)||(14872882-14872939)
chr1 (538-595)||(21687621-21687678)
chr1 (537-584)||(41081478-41081525)
chr1 (537-595)||(7337454-7337512)
chr1 (538-592)||(36894200-36894254)
chr1 (538-595)||(4413357-4413414)
chr1 (537-594)||(32395241-32395298)
chr1 (546-595)||(35484191-35484240)
chr1 (541-595)||(16989614-16989668)
chr1 (540-586)||(24583201-24583247)
chr1 (540-586)||(24583397-24583443)
chr1 (537-595)||(29738456-29738513)
chr1 (537-587)||(34878069-34878119)
chr1 (538-595)||(10776253-10776310)
chr1 (540-595)||(940481-940536)
chr1 (537-588)||(5984066-5984117)
chr1 (541-592)||(21947413-21947464)
chr1 (537-584)||(27456743-27456790)
chr1 (537-584)||(30879335-30879382)
chr1 (537-584)||(48217697-48217744)
chr1 (540-595)||(51373652-51373707)
chr1 (537-595)||(8211098-8211156)
chr1 (541-595)||(23289187-23289241)
chr1 (538-584)||(35584398-35584444)
chr1 (537-595)||(39888425-39888483)
chr1 (537-582)||(20266564-20266609)
chr1 (537-586)||(47133154-47133203)
chr1 (538-594)||(27579920-27579976)
chr1 (538-582)||(44637679-44637723)
chr1 (537-572)||(9686979-9687014)
chr1 (537-572)||(34519400-34519435)
chr1 (537-584)||(51868419-51868466)
chr1 (538-584)||(7342982-7343028)
chr1 (537-595)||(15431458-15431515)
chr1 (538-588)||(19596252-19596302)
chr1 (537-595)||(50377566-50377624)
chr1 (537-570)||(27914881-27914914)
chr1 (537-570)||(30712083-30712116)
chr1 (538-583)||(33486687-33486732)
chr1 (537-570)||(33816942-33816975)
chr1 (537-570)||(33876412-33876445)
chr1 (547-584)||(38646987-38647024)
chr1 (537-586)||(44543523-44543571)
chr1 (540-584)||(3871667-3871711)
chr1 (547-583)||(8893696-8893732)
chr1 (540-584)||(11709484-11709528)
chr1 (547-583)||(12967407-12967443)
chr1 (540-572)||(18569088-18569120)
chr1 (547-583)||(26771510-26771546)
chr1 (547-583)||(34659315-34659351)
chr1 (540-584)||(45805606-45805650)
chr1 (555-591)||(45841198-45841234)
chr1 (547-583)||(46589552-46589588)
chr1 (547-583)||(49652239-49652275)
[»] chr7 (49 HSPs)
chr7 (537-595)||(28044547-28044605)
chr7 (538-595)||(12141099-12141156)
chr7 (538-595)||(48061664-48061721)
chr7 (537-595)||(9977001-9977059)
chr7 (537-595)||(37837250-37837307)
chr7 (541-595)||(40993399-40993453)
chr7 (540-595)||(28407712-28407767)
chr7 (541-595)||(8001341-8001395)
chr7 (537-595)||(34899398-34899456)
chr7 (537-595)||(39328585-39328643)
chr7 (558-595)||(39171402-39171439)
chr7 (537-584)||(14627672-14627719)
chr7 (537-584)||(17611647-17611694)
chr7 (537-584)||(26492621-26492668)
chr7 (537-584)||(42066836-42066883)
chr7 (538-584)||(20083594-20083640)
chr7 (538-584)||(32684924-32684970)
chr7 (538-584)||(34773967-34774013)
chr7 (538-584)||(35261553-35261599)
chr7 (538-584)||(45198808-45198854)
chr7 (537-579)||(48316610-48316652)
chr7 (537-577)||(21266655-21266695)
chr7 (540-592)||(45349593-45349645)
chr7 (537-572)||(1448606-1448641)
chr7 (537-584)||(1485030-1485077)
chr7 (537-572)||(12502026-12502061)
chr7 (537-572)||(12527660-12527695)
chr7 (537-584)||(20116837-20116884)
chr7 (537-588)||(38880404-38880455)
chr7 (537-584)||(46822271-46822318)
chr7 (538-584)||(3267009-3267055)
chr7 (538-588)||(24069182-24069232)
chr7 (538-584)||(35495950-35495996)
chr7 (557-595)||(47590553-47590591)
chr7 (538-591)||(3876033-3876086)
chr7 (547-584)||(10574789-10574826)
chr7 (538-591)||(11344066-11344119)
chr7 (537-586)||(41553227-41553276)
chr7 (537-595)||(42978852-42978906)
chr7 (538-586)||(3222897-3222945)
chr7 (537-569)||(23425147-23425179)
chr7 (537-585)||(24610050-24610098)
chr7 (540-588)||(25286982-25287030)
chr7 (547-583)||(26017332-26017368)
chr7 (547-583)||(30992498-30992534)
chr7 (547-583)||(32312925-32312961)
chr7 (547-583)||(34893511-34893547)
chr7 (551-583)||(42603443-42603475)
chr7 (540-592)||(46700279-46700331)
[»] chr5 (40 HSPs)
chr5 (537-595)||(6011929-6011987)
chr5 (537-595)||(9113516-9113574)
chr5 (537-595)||(14726252-14726310)
chr5 (537-595)||(38007596-38007654)
chr5 (538-595)||(24229576-24229633)
chr5 (537-595)||(13007468-13007526)
chr5 (538-595)||(14082188-14082245)
chr5 (538-595)||(35851036-35851093)
chr5 (540-595)||(8096293-8096347)
chr5 (537-595)||(1409739-1409797)
chr5 (537-595)||(13422172-13422229)
chr5 (537-595)||(26825669-26825727)
chr5 (537-595)||(34945632-34945690)
chr5 (555-595)||(38598036-38598076)
chr5 (537-595)||(11073779-11073835)
chr5 (537-584)||(21060057-21060104)
chr5 (537-584)||(34881975-34882022)
chr5 (538-584)||(781646-781692)
chr5 (537-587)||(8088004-8088054)
chr5 (545-595)||(25980396-25980446)
chr5 (539-584)||(18677242-18677287)
chr5 (538-595)||(26877901-26877958)
chr5 (537-584)||(7242042-7242089)
chr5 (537-584)||(7247217-7247264)
chr5 (537-584)||(8984780-8984827)
chr5 (537-584)||(10649900-10649947)
chr5 (537-592)||(10723003-10723058)
chr5 (537-584)||(27752183-27752230)
chr5 (537-584)||(30371879-30371926)
chr5 (537-583)||(177754-177800)
chr5 (538-584)||(3271177-3271223)
chr5 (538-584)||(41184216-41184262)
chr5 (538-584)||(43008090-43008136)
chr5 (537-582)||(19280711-19280756)
chr5 (540-592)||(4771099-4771150)
chr5 (547-583)||(5378706-5378742)
chr5 (547-583)||(17218127-17218163)
chr5 (538-578)||(27576160-27576200)
chr5 (538-574)||(36057103-36057139)
chr5 (547-583)||(40775165-40775201)
[»] chr8 (45 HSPs)
chr8 (537-595)||(7883030-7883088)
chr8 (537-595)||(23230885-23230943)
chr8 (539-595)||(40211091-40211147)
chr8 (537-595)||(27498155-27498213)
chr8 (537-595)||(30568110-30568168)
chr8 (537-595)||(40618862-40618920)
chr8 (537-586)||(1236487-1236536)
chr8 (538-595)||(9637199-9637256)
chr8 (538-595)||(16928547-16928604)
chr8 (539-595)||(45445602-45445658)
chr8 (537-595)||(17693402-17693460)
chr8 (537-595)||(28086601-28086659)
chr8 (537-595)||(31013397-31013455)
chr8 (537-595)||(37971529-37971587)
chr8 (540-593)||(33214463-33214516)
chr8 (555-595)||(25190872-25190912)
chr8 (537-584)||(14906697-14906744)
chr8 (537-595)||(8412311-8412369)
chr8 (537-579)||(10377932-10377974)
chr8 (538-588)||(19443843-19443893)
chr8 (537-582)||(3240636-3240681)
chr8 (538-595)||(16247014-16247071)
chr8 (537-584)||(4809227-4809274)
chr8 (537-584)||(9072981-9073028)
chr8 (537-584)||(29777482-29777529)
chr8 (537-591)||(470936-470990)
chr8 (541-583)||(7579517-7579559)
chr8 (538-584)||(23851269-23851315)
chr8 (538-591)||(8868065-8868118)
chr8 (547-584)||(9799685-9799722)
chr8 (537-586)||(15344560-15344609)
chr8 (537-586)||(15433625-15433674)
chr8 (537-586)||(15524929-15524978)
chr8 (537-586)||(24099046-24099095)
chr8 (550-595)||(24186463-24186508)
chr8 (538-575)||(28240113-28240150)
chr8 (538-591)||(29939547-29939599)
chr8 (538-591)||(34610093-34610146)
chr8 (547-583)||(5457475-5457511)
chr8 (547-591)||(24842742-24842786)
chr8 (547-583)||(28296783-28296819)
chr8 (547-583)||(31712748-31712784)
chr8 (538-582)||(39152917-39152961)
chr8 (555-595)||(41684615-41684655)
chr8 (537-585)||(42046484-42046531)
[»] scaffold0026 (1 HSPs)
scaffold0026 (537-595)||(71661-71719)
[»] scaffold0014 (1 HSPs)
scaffold0014 (538-584)||(201148-201194)
[»] scaffold0884 (1 HSPs)
scaffold0884 (538-595)||(1765-1822)
[»] scaffold0136 (1 HSPs)
scaffold0136 (538-595)||(9834-9891)
[»] scaffold0121 (1 HSPs)
scaffold0121 (538-595)||(31066-31123)
[»] scaffold0603 (1 HSPs)
scaffold0603 (537-591)||(7971-8025)
[»] scaffold0127 (1 HSPs)
scaffold0127 (537-595)||(15732-15790)
[»] scaffold0219 (1 HSPs)
scaffold0219 (538-595)||(14664-14720)
[»] scaffold0157 (1 HSPs)
scaffold0157 (537-584)||(26827-26874)
[»] scaffold0039 (2 HSPs)
scaffold0039 (537-584)||(53192-53239)
scaffold0039 (539-588)||(93364-93413)
[»] scaffold0311 (1 HSPs)
scaffold0311 (542-584)||(8947-8989)
[»] scaffold0022 (1 HSPs)
scaffold0022 (538-584)||(83212-83258)
[»] scaffold0021 (1 HSPs)
scaffold0021 (537-591)||(4401-4455)
[»] scaffold0017 (1 HSPs)
scaffold0017 (561-595)||(32562-32596)
[»] scaffold0445 (1 HSPs)
scaffold0445 (537-578)||(1629-1670)
[»] scaffold0146 (1 HSPs)
scaffold0146 (537-569)||(16094-16126)
[»] scaffold0009 (1 HSPs)
scaffold0009 (538-586)||(57881-57929)


Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 14 - 309
Target Start/End: Original strand, 179448 - 179743
Alignment:
Q  14 atggacatcacagacatggcggtttatttagattctctcctttcaattaatctcatcaataccaccagctcaaagttccatattcatgtagcccttatcc 113  Q
    |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||| ||||    
T  179448 atgggcatcacagatatggcggtttattcagattctctcctttcaattaatctcatcactaccaccagttcaaagttccatattcatgcggccctaatcc 179547  T
Q  114 aagacatcagagacaagctttctctaaagaatttttcgctcaaccacaccctccgggaaggaaatcaaagtgctgactatttggctaaactaggtgcaat 213  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  179548 aagatatcagagacaagctttctctaaggaatttttcgctcaaccacaccctccgggaaggaaatcaaagtgctgactatttggctaaactaggtgcaat 179647  T
Q  214 gtcagatatcaacgtcctaatacaccagttgcctccggatgagctacgccctttgttgaagattgatgcagcaggaaccttgtttctgagatctta 309  Q
    ||||||| ||||||| ||||||||||||| |||||||||||| ||  ||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  179648 gtcagatgtcaacgttctaatacaccagtcgcctccggatgaactctgccctttgttgaagaatgatgcagcaggaaccttgttcctgagatctta 179743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 1415865 - 1415807
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  1415865 gacaaaaacaaaatgatattcattcattcaaatcgatagattacatcagatacaaacat 1415807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 5427661 - 5427719
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  5427661 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 5427719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 31788764 - 31788706
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  31788764 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 31788706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 31193129 - 31193186
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  31193129 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 31193186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 38445473 - 38445416
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  38445473 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 38445416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 36942914 - 36942972
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  36942914 gacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaaacat 36942972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 36692181 - 36692124
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||    
T  36692181 acaaaaacaaaacgatatacattcattcaaatcgatagagtacatcagatacaaacat 36692124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 537 - 592
Target Start/End: Original strand, 4041386 - 4041441
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  4041386 gacaaaaataaaatgatattcattcattcaaatcgatagtgtacatcagatacaaa 4041441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 11985028 - 11985083
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  11985028 aaaaaaaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 11985083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 537 - 592
Target Start/End: Complemental strand, 18763776 - 18763721
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  18763776 gacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaaa 18763721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 537 - 592
Target Start/End: Complemental strand, 33924013 - 33923958
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    ||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||    
T  33924013 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaa 33923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 541 - 595
Target Start/End: Complemental strand, 1421979 - 1421925
Alignment:
Q  541 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  1421979 aaaaaaaaatgatattcattcattcaaatcgataaagtacatcagatacaaacat 1421925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 4779061 - 4779003
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||  || |||||||||||||||||||||||||||||| ||||||||||    
T  4779061 gacaaaaacaaaactatattcattcattcaaatcgatagagtacatcaaatacaaacat 4779003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 33585527 - 33585585
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  33585527 gacaaaaacaaaacgatattctttcattcaaatcaatagagtacatcagatacaaacat 33585585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 37876398 - 37876456
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||    
T  37876398 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacat 37876456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 12677246 - 12677301
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||    
T  12677246 aaaaacaaaacgatattcattcattcaaatcgacagattacatcagatacaaacat 12677301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 591
Target Start/End: Original strand, 12553961 - 12554015
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||    
T  12553961 gacaaaaataaaatgatattcattcattcaaattgatagagtatatcagatacaa 12554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 30923250 - 30923296
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgatagagtacatca 30923296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 591
Target Start/End: Complemental strand, 14416473 - 14416420
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||||||||||||| || |||||||||||| |||||| ||||||||||||||    
T  14416473 acaaaaacaaaatgatatttattcattcaaattgatagaatacatcagatacaa 14416420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 25508861 - 25508918
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| || |||||||||||| |||||||||||||| ||||||||||    
T  25508861 acaaaaacaaaacgatatttattcattcaaattgatagagtacatcatatacaaacat 25508918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 586
Target Start/End: Original strand, 32448409 - 32448458
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  32448409 gacaaaaacaaaatgatattcattcattcaaattgatagaatacatcaga 32448458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 539 - 592
Target Start/End: Complemental strand, 35220634 - 35220581
Alignment:
Q  539 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||||||||||||||    
T  35220634 caaaaacaaaacgacattcattcattcaaattgatagagtacatcagatacaaa 35220581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 4193144 - 4193097
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  4193144 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 4193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 7646786 - 7646739
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||    
T  7646786 gacaaaaacaaaacgatattcattcattcaaatcgataaagtacatca 7646739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 9374337 - 9374384
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||||    
T  9374337 gacaaaaacaaaacgatattcattcattcaaatcgacagagtacatca 9374384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 25087342 - 25087295
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  25087342 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 25087295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 29173512 - 29173567
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||| || |||||||||||| ||| || ||||||||||||||||||    
T  29173512 aaaaacaaaatgatatttattcattcaaattgattgattacatcagatacaaacat 29173567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 31580429 - 31580476
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  31580429 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 31580476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 36234305 - 36234258
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  36234305 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 36234258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Complemental strand, 4228429 - 4228383
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  4228429 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 4228383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 21570183 - 21570229
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  21570183 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 21570229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 583
Target Start/End: Complemental strand, 32913535 - 32913489
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  32913535 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 32913489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 586
Target Start/End: Complemental strand, 37994591 - 37994542
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    ||||||||||||| ||| ||||||||||||||| |||||| |||||||||    
T  37994591 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga 37994542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 540 - 584
Target Start/End: Original strand, 38575263 - 38575307
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||    
T  38575263 aaaaacaaaatgatattcattcattcaaatcgagagattacatca 38575307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Original strand, 2808247 - 2808282
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    ||||||||||||||||| ||||||||||||||||||    
T  2808247 gacaaaaacaaaatgatattcattcattcaaatcga 2808282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 3725487 - 3725440
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||| ||||||||||| ||| |||||||    
T  3725487 gacaaaaacaaaatgatattcatttattcaaatcgagagattacatca 3725440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 7015485 - 7015532
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||||||    
T  7015485 gacaaaaacaaaatgatatttattcattcaaatcgagagattacatca 7015532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 8806173 - 8806126
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  8806173 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 8806126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 8971402 - 8971449
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| | |||||||||||||||| ||| |||||||    
T  8971402 gacaaaaacaaaatgatatccattcattcaaatcgagagattacatca 8971449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 9986116 - 9986163
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| ||||||||| |||||||| ||| |||||||    
T  9986116 gacaaaaacaaaatgatattcattcatccaaatcgagagattacatca 9986163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Complemental strand, 22422035 - 22422000
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22422035 gacaaaaacaaaatgatattcattcattcaaatcga 22422000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Original strand, 27248925 - 27248960
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    ||||||||||||||||| ||||||||||||||||||    
T  27248925 gacaaaaacaaaatgatattcattcattcaaatcga 27248960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 459051 - 459097
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||| |||| ||| ||||||||||||||||||||||||| ||||    
T  459051 acaaaaataaaacgatattcattcattcaaatcgatagagtatatca 459097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 4100635 - 4100593
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    |||||||||| ||| |||||||||||||||||||||| |||||    
T  4100635 aaaaacaaaacgatattcattcattcaaatcgatagattacat 4100593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 4903938 - 4903984
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||||    
T  4903938 acaaaaacaaaacgatattcattcatttaaattgatagagtacatca 4903984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 583
Target Start/End: Complemental strand, 8308398 - 8308356
Alignment:
Q  541 aaaacaaaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||    
T  8308398 aaaacaaaacgatattcattcattcaaatcgatagattacatc 8308356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 537 - 591
Target Start/End: Complemental strand, 14955848 - 14955794
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||||||||||||| |||||||||| |||| |||||| ||||| ||| ||||    
T  14955848 gacaaaaacaaaatgatattcattcatttaaattgatagaatacataagagacaa 14955794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 586
Target Start/End: Original strand, 17248943 - 17248989
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    ||||| |||||||| |||||||||||||||||||| | |||||||||    
T  17248943 aaaaataaaatgatattcattcattcaaatcgataaaatacatcaga 17248989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 591
Target Start/End: Original strand, 33759977 - 33760028
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||||||||| || |||||||||||||||||  ||||||||| ||||||||    
T  33759977 acaaaaacaaaataatattcattcattcaaatcg--agagtacattagatacaa 33760028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 537 - 583
Target Start/End: Complemental strand, 34600521 - 34600475
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||||||||||||| | |||||||||||||||| ||| ||||||    
T  34600521 gacaaaaacaaaatgatatccattcattcaaatcgagagattacatc 34600475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 537 - 579
Target Start/End: Complemental strand, 41328047 - 41328005
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagta 579  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||    
T  41328047 gacaaaaacaaaacgatattcattcattcaaattgatagagta 41328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 584
Target Start/End: Original strand, 11550340 - 11550377
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  11550340 aaatgatattcattcattcaaattgatagagtacatca 11550377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 591
Target Start/End: Original strand, 36175305 - 36175358
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||| |||||||| ||||||||||||||| || |||| |||||| ||||||    
T  36175305 acaaaaataaaatgatattcattcattcaaattgacagagaacatcaaatacaa 36175358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 41431335 - 41431290
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||    
T  41431335 gacaaaaataaaatgatattcattcattcaaatcgagagattacat 41431290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 4878408 - 4878444
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  4878408 aaatgatattcattcattcaaattgatagagtacatc 4878444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 546 - 582
Target Start/End: Complemental strand, 8809580 - 8809544
Alignment:
Q  546 aaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  8809580 aaaatgatattcattcattcaaattgatagagtacat 8809544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 12366308 - 12366272
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  12366308 aaatgatattcattcattcaaattgatagagtacatc 12366272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 15920314 - 15920278
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  15920314 aaatgatattcattcattcaaattgatagagtacatc 15920278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 18141155 - 18141191
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  18141155 aaatgatattcattcattcaaattgatagagtacatc 18141191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 569
Target Start/End: Original strand, 26025270 - 26025302
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaat 569  Q
    ||||||||||||||||| |||||||||||||||    
T  26025270 gacaaaaacaaaatgatattcattcattcaaat 26025302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 584
Target Start/End: Complemental strand, 28037389 - 28037345
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||| |||||||| |||||||||||| ||||||| |||||||||    
T  28037389 aaaaataaaatgatattcattcattcagatcgatatagtacatca 28037345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 588
Target Start/End: Original strand, 30399824 - 30399872
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 588  Q
    ||||| |||||||| |||||| |||||||| ||| ||||||||||||||    
T  30399824 aaaaataaaatgatattcatttattcaaattgatcgagtacatcagata 30399872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 584
Target Start/End: Complemental strand, 30420973 - 30420929
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  30420973 aaaaataaaatgatattcattcattcaaatcgagagattacatca 30420929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 581
Target Start/End: Original strand, 37613900 - 37613944
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtaca 581  Q
    |||||||||||||  || ||||| |||||||||||||||||||||    
T  37613900 gacaaaaacaaaaccatattcatccattcaaatcgatagagtaca 37613944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 591
Target Start/End: Complemental strand, 40125825 - 40125782
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||    
T  40125825 aaatgatattcattcattcaaattgatagagtacat-agatacaa 40125782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 584
Target Start/End: Original strand, 40625834 - 40625878
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||| ||||| |||||||||||| ||| |||||||    
T  40625834 aaaaacaaaatgatattcatccattcaaatcgagagattacatca 40625878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 606503 - 606445
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  606503 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacat 606445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 32327011 - 32327069
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  32327011 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 32327069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 12170766 - 12170709
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  12170766 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 12170709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 3913365 - 3913423
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  3913365 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 3913423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 9341442 - 9341500
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  9341442 gacaaaaacaaaacgatactcattcattcaaatcgatagagtacatcagatacaaacat 9341500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 21426480 - 21426535
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  21426480 aaaaacaacacgatattcattcattcaaatcgatagagtacatcagatacaaacat 21426535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 14174862 - 14174920
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||    
T  14174862 gacaaaaacaaaacgatattcattcattcaaatcgatatattacatcagatacaaacat 14174920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 14179398 - 14179456
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||    
T  14179398 gacaaaaacaaaacgatattcattcattcaaatcgatatattacatcagatacaaacat 14179456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 33052959 - 33053017
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||    
T  33052959 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacat 33053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 537 - 588
Target Start/End: Original strand, 7514994 - 7515045
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 588  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  7514994 gacaaaaacaaaacgatattcattcattcaaatcgatagagtgcatcagata 7515045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 67792 - 67850
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| | | ||||||||||||||||||||||||| |||||||||||||||    
T  67792 gacaaaaataaaacggtattcattcattcaaatcgatagagtatatcagatacaaacat 67850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 29319668 - 29319726
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||| |||||||||||||||  ||| |||| |||||||||||||||    
T  29319668 gacaaaaacaaaatgatattcattcattcaaattaataaagtatatcagatacaaacat 29319726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 8497271 - 8497224
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  8497271 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 8497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 23947091 - 23947138
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  23947091 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 23947138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 595
Target Start/End: Complemental strand, 30894894 - 30894839
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||| |||| ||| ||||||||||||||||||| || ||||||||||||||||||    
T  30894894 aaaaataaaacgatattcattcattcaaatcgatggaatacatcagatacaaacat 30894839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 587
Target Start/End: Original strand, 31851672 - 31851722
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagat 587  Q
    |||||||||||||| || ||||||||||||||| |||||| ||||||||||    
T  31851672 gacaaaaacaaaataatattcattcattcaaattgatagaatacatcagat 31851722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 538 - 587
Target Start/End: Original strand, 34185486 - 34185535
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagat 587  Q
    ||||||| |||||||| ||||||||||||||| ||||||||| |||||||    
T  34185486 acaaaaataaaatgatattcattcattcaaattgatagagtatatcagat 34185535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 539 - 591
Target Start/End: Complemental strand, 679416 - 679364
Alignment:
Q  539 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||||||||| | || |||||||||||| |||||| ||||||||||||||    
T  679416 caaaaacaaaatgttatttattcattcaaattgatagaatacatcagatacaa 679364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 540 - 584
Target Start/End: Original strand, 7880879 - 7880923
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||    
T  7880879 aaaaacaaaatgatattcattcattcaaatcgagagattacatca 7880923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 555 - 595
Target Start/End: Complemental strand, 23128899 - 23128859
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  23128899 ttcattcattcaaatagacagagtacatcagatacaaacat 23128859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 555 - 595
Target Start/End: Original strand, 30608324 - 30608364
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  30608324 ttcattcattcaaattgatagagtaaatcagatacaaacat 30608364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 538 - 586
Target Start/End: Complemental strand, 31297117 - 31297069
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||||||||| ||| ||||||||||||||| |||||| |||||||||    
T  31297117 acaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga 31297069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 537 - 593
Target Start/End: Complemental strand, 32060175 - 32060119
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaac 593  Q
    |||||||| |||| ||| ||||||||||||||| |||| | ||||||||||||||||    
T  32060175 gacaaaaataaaacgatattcattcattcaaattgatatattacatcagatacaaac 32060119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 4984341 - 4984388
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  4984341 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 4984388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Complemental strand, 7028158 - 7028123
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    ||||||||||||||||| ||||||||||||||||||    
T  7028158 gacaaaaacaaaatgatattcattcattcaaatcga 7028123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 12653247 - 12653200
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||| ||||||| ||| |||||||    
T  12653247 gacaaaaacaaaatgatattcattcatttaaatcgagagattacatca 12653200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 17237060 - 17237107
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||| ||||||||||| |||||||||||||||||| ||| |||||||    
T  17237060 gacaacaacaaaatgatattcattcattcaaatcgagagattacatca 17237107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 25064539 - 25064492
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  25064539 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 25064492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 28634887 - 28634934
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||| |||| |||||||||||||||||||||  |||||||    
T  28634887 gacaaaaacaaactgatattcattcattcaaatcgataggttacatca 28634934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 540 - 595
Target Start/End: Complemental strand, 34018856 - 34018801
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||| ||| |||||||||| |||| ||||||||| || ||||||||||||    
T  34018856 aaaaacaaaacgatattcattcatttaaattgatagagtatattagatacaaacat 34018801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 34489501 - 34489459
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    |||||||||||||| || ||||||||||||||||||| |||||    
T  34489501 aaaaacaaaatgatatttattcattcaaatcgatagattacat 34489459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 8027892 - 8027937
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    |||| |||||||||||| |||||||||||||||||| ||| |||||    
T  8027892 gacagaaacaaaatgatattcattcattcaaatcgagagattacat 8027937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 574
Target Start/End: Original strand, 1450528 - 1450564
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgata 574  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  1450528 acaaaaataaaatgatattcattcattcaaatcgata 1450564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 584
Target Start/End: Original strand, 7875821 - 7875865
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||| |||||||||| ||||||| ||| |||||||    
T  7875821 aaaaacaaaatgatattcattcatttaaatcgagagattacatca 7875865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 584
Target Start/End: Original strand, 11321338 - 11321382
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||| ||| || |||||||||||| ||||||||||||||    
T  11321338 aaaaacaaaacgatatttattcattcaaattgatagagtacatca 11321382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 555 - 591
Target Start/End: Complemental strand, 29744516 - 29744480
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  29744516 ttcattcattcaaattgatagaatacatcagatacaa 29744480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 3e-22; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 13634433 - 13634375
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13634433 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacat 13634375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 19853303 - 19853361
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  19853303 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 19853361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 21686033 - 21686091
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  21686033 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 21686091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 26633463 - 26633520
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  26633463 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 26633520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 56040438 - 56040495
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  56040438 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 56040495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 4142555 - 4142613
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  4142555 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacat 4142613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 32766832 - 32766774
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  32766832 gacaaaaacaaaacaatattcattcattcaaatcgatagagtacatcagatacaaacat 32766774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 2521096 - 2521039
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  2521096 acaaaaacaaaacgatattcattcattcaaatcgatagagtccatcagatacaaacat 2521039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 10258692 - 10258750
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||    
T  10258692 gacaaaaacaaagtgagattcattcattcaaattgatagagtacatcagatacaaacat 10258750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 17949114 - 17949172
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  17949114 gacagaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaaacat 17949172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 17952966 - 17953024
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  17952966 gacagaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaaacat 17953024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 22611507 - 22611450
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||    
T  22611507 acaaaaacaaaacgatatttattcatttaaatcgatagagtacatcagatacaaacat 22611450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 555 - 595
Target Start/End: Original strand, 24098878 - 24098918
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24098878 ttcattcattcaaatcgatagagtacatcagatacaaacat 24098918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 555 - 595
Target Start/End: Original strand, 48257441 - 48257481
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  48257441 ttcattcattcaaatcgatagagtacatcagatacaaacat 48257481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 591
Target Start/End: Original strand, 6155000 - 6155054
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||| ||||||||    
T  6155000 gacaaaaacaaaatgatattcattcattcaaattgatagaatacattagatacaa 6155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 586
Target Start/End: Original strand, 47320204 - 47320253
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||||    
T  47320204 gacaaaaacaaaattatattcattcattcaaatcgatagaatacatcaga 47320253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 540 - 592
Target Start/End: Complemental strand, 43510511 - 43510459
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    |||||||||| ||| |||||||||||||||||||| ||||||||| |||||||    
T  43510511 aaaaacaaaacgatattcattcattcaaatcgataaagtacatcaaatacaaa 43510459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 2115362 - 2115409
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  2115362 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 2115409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 9284226 - 9284179
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  9284226 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 9284179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 9528651 - 9528698
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  9528651 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 9528698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 20569572 - 20569525
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  20569572 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 20569525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 25274198 - 25274151
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  25274198 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 25274151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 545 - 584
Target Start/End: Original strand, 32952540 - 32952579
Alignment:
Q  545 caaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  32952540 caaaatgatattcattcattcaaatcgatagagtacatca 32952579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 541 - 584
Target Start/End: Original strand, 46990909 - 46990952
Alignment:
Q  541 aaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||| |||||||| ||||||||||||||||||||||||||||||    
T  46990909 aaaaaaaaatgatattcattcattcaaatcgatagagtacatca 46990952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 592
Target Start/End: Complemental strand, 53444437 - 53444382
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    |||||||||||||| || ||||||||||||||| |||||| ||||| |||||||||    
T  53444437 gacaaaaacaaaataatattcattcattcaaatagatagattacattagatacaaa 53444382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 591
Target Start/End: Complemental strand, 36162040 - 36161986
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||||| |||||||| ||||||||||||||| |||||| ||||||| ||||||    
T  36162040 gacaaaaataaaatgatattcattcattcaaattgatagaatacatcaaatacaa 36161986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 44596977 - 44596919
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||  || |||||| |||||||| |||||||||||||| ||||||||||    
T  44596977 gacaaaaacaaaacaatattcattaattcaaattgatagagtacatcaaatacaaacat 44596919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 53616425 - 53616471
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  53616425 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 53616471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 538 - 591
Target Start/End: Original strand, 40065986 - 40066039
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||||||||  || ||||||||||||||||||||||| | |||||||||||    
T  40065986 acaaaaacaaaacaatattcattcattcaaatcgatagagaagatcagatacaa 40066039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 53811336 - 53811291
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||||    
T  53811336 gacaaaaacaaaacgatattcattcatttaaatcgatagagtacat 53811291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 539 - 591
Target Start/End: Complemental strand, 43853770 - 43853718
Alignment:
Q  539 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||| |||| ||| ||||||||||||||| |||||| ||||||||||||||    
T  43853770 caaaaataaaacgatattcattcattcaaattgatagaatacatcagatacaa 43853718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 3335938 - 3335985
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||  || |||||||||||||||| |||||||||||||    
T  3335938 gacaaaaacaaaacaatattcattcattcaaatcaatagagtacatca 3335985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 4644173 - 4644126
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  4644173 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 4644126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 10359323 - 10359370
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| ||||||||| |||||||| ||| |||||||    
T  10359323 gacaaaaacaaaatgatattcattcatccaaatcgagagattacatca 10359370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 12265776 - 12265729
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||| |||| |||||||||||||||||||||  |||||||    
T  12265776 gacaaaaacaaactgatattcattcattcaaatcgataggttacatca 12265729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 12493650 - 12493603
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||| |||| ||||||||||||||    
T  12493650 gacaaaaataaaatgatattcattcattaaaattgatagagtacatca 12493603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 38706484 - 38706531
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||| || |||||||||||||||||| ||| |||||||    
T  38706484 gacaaaaacaaaatcatattcattcattcaaatcgagagattacatca 38706531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 52097690 - 52097737
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||| ||| |||||||||||||||| | |||||||||||    
T  52097690 gacaaaaacaaaacgatattcattcattcaaatcaacagagtacatca 52097737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 538 - 588
Target Start/End: Original strand, 56156440 - 56156491
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgataga-gtacatcagata 588  Q
    |||||||||||| ||| ||||||||||||||| |||||| ||||||||||||    
T  56156440 acaaaaacaaaacgatattcattcattcaaattgatagaggtacatcagata 56156491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Complemental strand, 8670796 - 8670750
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||| |||| ||| |||||||||||||||||||||| |||||||    
T  8670796 acaaaaataaaacgatattcattcattcaaatcgatagattacatca 8670750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 21662754 - 21662697
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||| ||||| ||| || |||||||||||  |||||||||||||| ||||||||||    
T  21662754 acaaaatcaaaacgatatttattcattcaaagtgatagagtacatcaaatacaaacat 21662697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 21671518 - 21671461
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||| ||||| ||| || |||||||||||  |||||||||||||| ||||||||||    
T  21671518 acaaaatcaaaacgatatttattcattcaaagtgatagagtacatcaaatacaaacat 21671461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 591
Target Start/End: Complemental strand, 37465801 - 37465748
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||| |||||| ||| |||||||||| |||| |||||| ||||||||||||||    
T  37465801 acaaagacaaaacgatattcattcatttaaattgatagaatacatcagatacaa 37465748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 45440057 - 45440000
Alignment:
Q  14 atggacatcacagacatggcggtttatttagattctctcctttcaattaatctcatca 71  Q
    |||| |||| |||| ||||  |||||||||||||| |||||||||||||| |||||||    
T  45440057 atgggcatctcagatatggttgtttatttagattccctcctttcaattaacctcatca 45440000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 52979061 - 52979004
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| ||| ||||||||||| |||  ||||||||||||| ||||||    
T  52979061 acaaaaacaaaacgatattctttcattcaaattgatctagtacatcagatataaacat 52979004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 581
Target Start/End: Original strand, 10389528 - 10389572
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtaca 581  Q
    |||||||| |||||||| |||||||||||||||||| ||| ||||    
T  10389528 gacaaaaataaaatgatattcattcattcaaatcgagagattaca 10389572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 24100594 - 24100558
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  24100594 aaatgatattcattcattcaaattgatagagtacatc 24100558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 581
Target Start/End: Original strand, 34024212 - 34024256
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtaca 581  Q
    ||||||| ||||||||| |||||||||||||||||| ||| ||||    
T  34024212 gacaaaagcaaaatgatattcattcattcaaatcgagagattaca 34024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 35348626 - 35348567
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgata--gagtacatcagatacaaacat 595  Q
    |||| ||||||| ||| ||||||||  ||||||||||  |||||||||||||||||||||    
T  35348626 acaataacaaaacgatattcattcaaccaaatcgataaagagtacatcagatacaaacat 35348567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 38943817 - 38943853
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  38943817 aaatgatattcattcattcaaattgatagagtacatc 38943853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 44374949 - 44374985
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  44374949 aaatgatattcattcattcaaattgatagagtacatc 44374985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 584
Target Start/End: Original strand, 45227818 - 45227862
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  45227818 aaaaaaaaaatgatattcattcattcaaatcgagagattacatca 45227862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 56236491 - 56236527
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  56236491 aaatgatattcattcattcaaattgatagagtacatc 56236527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 21533600 - 21533658
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21533600 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacat 21533658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 43017185 - 43017127
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  43017185 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 43017127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 539 - 592
Target Start/End: Original strand, 48650527 - 48650580
Alignment:
Q  539 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48650527 caaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaa 48650580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 45568239 - 45568294
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  45568239 aaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 45568294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 6954487 - 6954545
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  6954487 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacttcagatacaaacat 6954545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 9797325 - 9797383
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  9797325 gacaaaaacaaaacgatattcattcattcaaatcgatatagtacatcagatacaaacat 9797383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 47041839 - 47041897
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  47041839 gacaaaaacaaaatgatattcattcattcaaatagatagattacatcagatacaaacat 47041897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 52922908 - 52922966
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  52922908 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacat 52922966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 40487621 - 40487564
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  40487621 acaaaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaaacat 40487564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 46304313 - 46304370
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  46304313 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaaacat 46304370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 10108533 - 10108475
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  10108533 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacat 10108475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 10233367 - 10233309
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  10233367 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacat 10233309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 587
Target Start/End: Original strand, 20464756 - 20464806
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagat 587  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  20464756 gacaaaaacaaaatgatattcattcattcaaattgatagagtacatcagat 20464806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 36910557 - 36910615
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  36910557 gacaaaaataaaacgatattcattcattcaaatcgatagagtacatcagatataaacat 36910615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 541 - 595
Target Start/End: Original strand, 43488386 - 43488440
Alignment:
Q  541 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  43488386 aaaacaaaacgatattcattcattcaaatcgatagagtacattagatacaaacat 43488440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 9998763 - 9998706
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  9998763 acaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacat 9998706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 21431912 - 21431855
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaaca 594  Q
    |||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  21431912 gacaaaaataaaacgacattcattcattcaaatcgatagagtacatcagatacaaaca 21431855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 54149287 - 54149230
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||  ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  54149287 acaaaaattaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 54149230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 4711779 - 4711721
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| ||| ||||||||  |||||||||||||||||||||||||||||||    
T  4711779 gacaaaaataaaacgatattcattcaaccaaatcgatagagtacatcagatacaaacat 4711721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 10229773 - 10229715
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| ||| ||||||||||||||||||||||||| |||| ||||||||||    
T  10229773 gacaaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaaacat 10229715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 33580177 - 33580119
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||| ||||||||||    
T  33580177 gacaaaaacaagacgatattcattcattcaaatcgatagattacatcaaatacaaacat 33580119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 38546096 - 38546038
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| || ||||||||||||||||||| ||| ||||||||||||||    
T  38546096 gacaaaaacaaaacgatatttattcattcaaatcgatagattacctcagatacaaacat 38546038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 44959767 - 44959822
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||    
T  44959767 acaaaaacaaaattat--tcattcattcaaatcgatagaatacatcagatacaaacat 44959822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 21313333 - 21313276
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaaca 594  Q
    ||||||||||||| ||| ||||||||||||||| ||| ||||| ||||||||||||||    
T  21313333 gacaaaaacaaaacgatattcattcattcaaattgattgagtatatcagatacaaaca 21313276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 558 - 595
Target Start/End: Original strand, 38859943 - 38859980
Alignment:
Q  558 attcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38859943 attcattcaaatcgatagagtacatcagatacaaacat 38859980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 40556998 - 40556941
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||| | ||||||||| ||||||||||    
T  40556998 acaaaaacaaaacgatattcattcattcaaatcgacatagtacatcaaatacaaacat 40556941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 540 - 592
Target Start/End: Complemental strand, 37041062 - 37041010
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    |||||||||| ||| |||||||||||| || ||||||||||||||||||||||    
T  37041062 aaaaacaaaacgatattcattcattcagattgatagagtacatcagatacaaa 37041010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 628715 - 628762
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  628715 gacaaaaacaaaatgatattcattcattcaaattgatagaatacatca 628762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 591
Target Start/End: Original strand, 3085085 - 3085136
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||||||||||| ||||||||||||||| |||||| ||| ||||||||||    
T  3085085 aaaaacaaaatgatattcattcattcaaattgatagaatacttcagatacaa 3085136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 4178865 - 4178818
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  4178865 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 4178818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 593
Target Start/End: Original strand, 23799740 - 23799794
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaac 593  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||    
T  23799740 acaaaaacaaaacgatattcattcattcaaattgatagagtacat-agatacaaac 23799794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 25162736 - 25162689
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  25162736 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 25162689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 583
Target Start/End: Complemental strand, 2342748 - 2342702
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  2342748 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatc 2342702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Complemental strand, 32607768 - 32607722
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  32607768 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 32607722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 47896448 - 47896390
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||||| | ||||||||||    
T  47896448 gacaaaaacaaaacgatattcattgattcaaattgatagagtacattaaatacaaacat 47896390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 586
Target Start/End: Original strand, 53807650 - 53807699
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    ||||||||||||||||| |||||||||| ||||| ||||| |||||||||    
T  53807650 gacaaaaacaaaatgatattcattcattaaaatcaatagaatacatcaga 53807699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 538 - 582
Target Start/End: Complemental strand, 29503760 - 29503716
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||    
T  29503760 acaaaaacaaaatgatattcattcattcaaatcaatagattacat 29503716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 12116398 - 12116351
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  12116398 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 12116351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 25631300 - 25631347
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  25631300 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 25631347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 36906422 - 36906375
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  36906422 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 36906375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Original strand, 38854813 - 38854848
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    ||||||||||||||||| ||||||||||||||||||    
T  38854813 gacaaaaacaaaatgatattcattcattcaaatcga 38854848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 24396291 - 24396337
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||| ||| |||||| |||||||| ||||||||||||||    
T  24396291 acaaaaacaaaacgatattcattaattcaaattgatagagtacatca 24396337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Complemental strand, 25850097 - 25850051
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||| ||| |||||||||||||||| ||| |||||||||    
T  25850097 acaaaaacaaaacgatattcattcattcaaatcaataaagtacatca 25850051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 537 - 583
Target Start/End: Complemental strand, 33076734 - 33076689
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||    
T  33076734 gacaaaaacaaa-tgatattcattcattcaaattgatagagtacatc 33076689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 572
Target Start/End: Original strand, 44907174 - 44907208
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    |||||||||||||||| ||||||||||||||||||    
T  44907174 acaaaaacaaaatgatattcattcattcaaatcga 44907208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 572
Target Start/End: Original strand, 50611193 - 50611227
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    |||||||||||||||| ||||||||||||||||||    
T  50611193 acaaaaacaaaatgatattcattcattcaaatcga 50611227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 591
Target Start/End: Complemental strand, 14859791 - 14859738
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||||| ||  || ||||||||||||||| |||||| ||||||||||||||    
T  14859791 acaaaaacagaacaatattcattcattcaaattgatagaatacatcagatacaa 14859738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 558 - 595
Target Start/End: Original strand, 36461249 - 36461286
Alignment:
Q  558 attcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  36461249 attcattcaaattgatagagtacattagatacaaacat 36461286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 51202038 - 51202083
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||||    
T  51202038 gacaaaaacaaaatgatatttattcattcaaatcgagagattacat 51202083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 591
Target Start/End: Complemental strand, 53508529 - 53508476
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||| ||||||||| |||||||||| || | |||||| ||||||||||||||    
T  53508529 acaaaagcaaaatgatattcattcatttaatttgatagaatacatcagatacaa 53508476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 555 - 595
Target Start/End: Original strand, 7448723 - 7448763
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||| ||||||||||| |||||| ||||||    
T  7448723 ttcattcattcaaattgatagagtacaacagatataaacat 7448763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 555 - 595
Target Start/End: Original strand, 7456865 - 7456905
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||| ||||||||||| |||||| ||||||    
T  7456865 ttcattcattcaaattgatagagtacaacagatataaacat 7456905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 569
Target Start/End: Complemental strand, 17238105 - 17238073
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaat 569  Q
    ||||||||||||||||| |||||||||||||||    
T  17238105 gacaaaaacaaaatgatattcattcattcaaat 17238073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 36623931 - 36623967
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  36623931 aaatgatattcattcattcaaattgatagagtacatc 36623967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 584
Target Start/End: Original strand, 38440368 - 38440412
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  38440368 aaaaataaaatgatattcattcattcaaatcgaaagattacatca 38440412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 586
Target Start/End: Complemental strand, 41818522 - 41818474
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||| ||||| ||| ||||||||||||||| |||||| |||||||||    
T  41818522 acaaaagcaaaacgatattcattcattcaaattgatagaatacatcaga 41818474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 574
Target Start/End: Complemental strand, 46178867 - 46178831
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgata 574  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  46178867 acaaaaacaaaacgattttcattcattcaaatcgata 46178831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 586
Target Start/End: Original strand, 50194128 - 50194176
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||| ||||||||| ||||||||||||||| |||| | |||||||||    
T  50194128 acaaaagcaaaatgatattcattcattcaaattgatataatacatcaga 50194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 21695315 - 21695368
Alignment:
Q  386 tgtgtcaatatttttcatttcgaattagatgacaagaaaaatgatatagaagag 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21695315 tgtgtcaatatttttcatttcgaattagatgacaagaaaaatgatatagaagag 21695368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 11462274 - 11462331
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  11462274 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 11462331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 26535637 - 26535579
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  26535637 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaaacat 26535579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 44915940 - 44915882
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  44915940 gacaaaaataaaatgatattcattcattcaaattgatagagtacatcagatacaaacat 44915882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 49504386 - 49504444
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  49504386 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacataagatacaaacat 49504444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 14872939 - 14872882
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  14872939 acaaaaacaaaatgatattcattcatttaaatcgatagagtacatcacatacaaacat 14872882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 21687678 - 21687621
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  21687678 acaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacat 21687621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 41081478 - 41081525
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41081478 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatca 41081525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 7337454 - 7337512
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| | || ||| |||||||||||||||||||||||||||||||||||||||||    
T  7337454 gacaaaaatataacgatattcattcattcaaatcgatagagtacatcagatacaaacat 7337512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 592
Target Start/End: Original strand, 36894200 - 36894254
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  36894200 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaa 36894254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 4413414 - 4413357
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| || |||| |||||||||||||||||||||||||||||||||    
T  4413414 acaaaaacaaaacgatatttattcgttcaaatcgatagagtacatcagatacaaacat 4413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 32395298 - 32395241
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaaca 594  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||| |||||||||    
T  32395298 gacaaaaacaaaacgatattcatccattcaaatcgatagagtacatcaaatacaaaca 32395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 546 - 595
Target Start/End: Original strand, 35484191 - 35484240
Alignment:
Q  546 aaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  35484191 aaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 35484240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 541 - 595
Target Start/End: Complemental strand, 16989668 - 16989614
Alignment:
Q  541 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||| ||||||||||    
T  16989668 aaaacaaaacgattttcattcattcaaatcgatagattacatcatatacaaacat 16989614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 540 - 586
Target Start/End: Complemental strand, 24583247 - 24583201
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||    
T  24583247 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 24583201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 540 - 586
Target Start/End: Complemental strand, 24583443 - 24583397
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||    
T  24583443 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 24583397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 29738456 - 29738513
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||  ||| |||| ||||||||||||||||||||||||||||||||||||    
T  29738456 gacaaaaacaaac-gatattcaatcattcaaatcgatagagtacatcagatacaaacat 29738513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 587
Target Start/End: Original strand, 34878069 - 34878119
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagat 587  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  34878069 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagat 34878119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 10776253 - 10776310
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||||| ||| ||||||||||| ||||||||| ||||||| |||||||    
T  10776253 acaaaaacaaaatgatattcgttcattcaaattgatagagtatatcagatgcaaacat 10776310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 595
Target Start/End: Complemental strand, 940536 - 940481
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||| ||| |||||||||| ||||| ||||||||||| ||||||||||||    
T  940536 aaaaacaaaacgatattcattcatttaaatcaatagagtacataagatacaaacat 940481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 588
Target Start/End: Complemental strand, 5984117 - 5984066
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 588  Q
    ||||||||||||| ||| |||||||||||||||||||||| || ||||||||    
T  5984117 gacaaaaacaaaacgatattcattcattcaaatcgatagaatatatcagata 5984066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 541 - 592
Target Start/End: Original strand, 21947413 - 21947464
Alignment:
Q  541 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    |||| |||| ||| |||||||||||||||||||||||||||||| |||||||    
T  21947413 aaaataaaacgatattcattcattcaaatcgatagagtacatcatatacaaa 21947464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 27456790 - 27456743
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  27456790 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatca 27456743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 30879382 - 30879335
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  30879382 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 30879335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 48217744 - 48217697
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  48217744 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 48217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 51373652 - 51373707
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||| |||| ||||||||||||||||||| |||| ||||||| ||||||||||||    
T  51373652 aaaaataaaacgatgttcattcattcaaattgataaagtacattagatacaaacat 51373707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 8211098 - 8211156
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||  || |||||||| |||| |||||||||||||| ||||||||||||    
T  8211098 gacaaaaacaaaacaatattcattcaatcaattcgatagagtacattagatacaaacat 8211156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 541 - 595
Target Start/End: Original strand, 23289187 - 23289241
Alignment:
Q  541 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||| |||| ||| |||||||||||||||||||||| ||||||| ||||||||||    
T  23289187 aaaataaaacgatattcattcattcaaatcgatagattacatcatatacaaacat 23289241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 35584398 - 35584444
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  35584398 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 35584444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 39888483 - 39888425
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| ||||||||| ||||| |||| | ||||||||||||||||||    
T  39888483 gacaaaaacaaaacgatattcattcatacaaattgatataatacatcagatacaaacat 39888425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 20266609 - 20266564
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||    
T  20266609 gacaaaaacaaaatgatattcattcattcaaatcgagagattacat 20266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 586
Target Start/End: Complemental strand, 47133203 - 47133154
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    ||||||||||||| ||| ||||||||||||||| |||||| |||||||||    
T  47133203 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatcaga 47133154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 538 - 594
Target Start/End: Original strand, 27579920 - 27579976
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaaca 594  Q
    ||||||| ||||| || |||||| |||||||| |||||||||||||| |||||||||    
T  27579920 acaaaaataaaataatattcatttattcaaattgatagagtacatcatatacaaaca 27579976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 538 - 582
Target Start/End: Complemental strand, 44637723 - 44637679
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||    
T  44637723 acaaaaataaaatgatattcattcattccaatcgatagagtacat 44637679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Original strand, 9686979 - 9687014
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9686979 gacaaaaacaaaatgatattcattcattcaaatcga 9687014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Complemental strand, 34519435 - 34519400
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34519435 gacaaaaacaaaatgatattcattcattcaaatcga 34519400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 51868419 - 51868466
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  51868419 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 51868466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Complemental strand, 7343028 - 7342982
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  7343028 acaaaaataaaatgatattcattcattcaaatcgagagattacatca 7342982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 15431458 - 15431515
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||| ||||||||| ||||||||||| |||  | ||||||||||||||||||||||    
T  15431458 gacaaaatcaaaatgatattcattcattc-aattaacagagtacatcagatacaaacat 15431515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 588
Target Start/End: Original strand, 19596252 - 19596302
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 588  Q
    |||||||||||||||| ||| |||||||||||| ||||| ||||| |||||    
T  19596252 acaaaaacaaaatgatattcgttcattcaaatcaatagattacattagata 19596302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 50377624 - 50377566
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| ||||||||||||||| ||||   ||||||||||| ||||||    
T  50377624 gacaaaaacaaaacgatattcattcattcaaattgataagatacatcagatataaacat 50377566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 570
Target Start/End: Original strand, 27914881 - 27914914
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatc 570  Q
    ||||||||||||||||| ||||||||||||||||    
T  27914881 gacaaaaacaaaatgatattcattcattcaaatc 27914914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 570
Target Start/End: Original strand, 30712083 - 30712116
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatc 570  Q
    ||||||||||||||||| ||||||||||||||||    
T  30712083 gacaaaaacaaaatgatattcattcattcaaatc 30712116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 583
Target Start/End: Original strand, 33486687 - 33486732
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| |||| ||| ||||||||||||||| |||||||||||||    
T  33486687 acaaaaaaaaaacgatattcattcattcaaattgatagagtacatc 33486732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 570
Target Start/End: Original strand, 33816942 - 33816975
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatc 570  Q
    ||||||||||||||||| ||||||||||||||||    
T  33816942 gacaaaaacaaaatgatcttcattcattcaaatc 33816975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 570
Target Start/End: Original strand, 33876412 - 33876445
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatc 570  Q
    ||||||||||||||||| ||||||||||||||||    
T  33876412 gacaaaaacaaaatgatcttcattcattcaaatc 33876445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 584
Target Start/End: Complemental strand, 38647024 - 38646987
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  38647024 aaatgatattcattcattcaaattgatagagtacatca 38646987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 586
Target Start/End: Complemental strand, 44543571 - 44543523
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    ||||||||||||||||| ||||| |||||||||| ||||| |||||||||    
T  44543571 gacaaaaacaaaatgatattcat-cattcaaatcaatagaatacatcaga 44543523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 584
Target Start/End: Complemental strand, 3871711 - 3871667
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  3871711 aaaaataaaatgatattcattcattcaaatcgagagattacatca 3871667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 8893732 - 8893696
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  8893732 aaatgatattcattcattcaaattgatagagtacatc 8893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 584
Target Start/End: Original strand, 11709484 - 11709528
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  11709484 aaaaataaaatgatattcattcattcaaatcgagagattacatca 11709528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 12967407 - 12967443
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  12967407 aaatgatattcattcattcaaattgatagagtacatc 12967443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 572
Target Start/End: Original strand, 18569088 - 18569120
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcga 572  Q
    |||||||||||||| ||||||||||||||||||    
T  18569088 aaaaacaaaatgatattcattcattcaaatcga 18569120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 26771546 - 26771510
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  26771546 aaatgatattcattcattcaaattgatagagtacatc 26771510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 34659315 - 34659351
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  34659315 aaatgatattcattcattcaaattgatagagtacatc 34659351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 584
Target Start/End: Original strand, 45805606 - 45805650
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  45805606 aaaaataaaatgatattcattcattcaaatcgagagattacatca 45805650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 555 - 591
Target Start/End: Complemental strand, 45841234 - 45841198
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  45841234 ttcattcattcaaatcgataaagtacatcaaatacaa 45841198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 46589588 - 46589552
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  46589588 aaatgatattcattcattcaaattgatagagtacatc 46589552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 49652275 - 49652239
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  49652275 aaatgatattcattcattcaaattgatagagtacatc 49652239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 28044547 - 28044605
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  28044547 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 28044605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 12141099 - 12141156
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  12141099 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 12141156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 48061721 - 48061664
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||    
T  48061721 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaggtacaaacat 48061664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 9977001 - 9977059
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||||    
T  9977001 gacaaaaacaaaacgatattcattcatttaaattgatagagtacatcagatacaaacat 9977059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 37837250 - 37837307
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  37837250 gacaaaaacaaac-gatattcattcattcaaatcgatagagtacatcagatacaaacat 37837307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 541 - 595
Target Start/End: Complemental strand, 40993453 - 40993399
Alignment:
Q  541 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  40993453 aaaacaaaacgatattcattcatttaaatcgatagagtacatcagatacaaacat 40993399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 28407712 - 28407767
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||    
T  28407712 aaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacat 28407767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 541 - 595
Target Start/End: Original strand, 8001341 - 8001395
Alignment:
Q  541 aaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||| |||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  8001341 aaaataaaacgatattcattcattcaaatcgatagagtgcatcagatacaaacat 8001395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 34899398 - 34899456
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||||||| || |||||||||||| |||||||||||||| ||||||||||    
T  34899398 gacaaaaataaaatgatatttattcattcaaattgatagagtacatcaaatacaaacat 34899456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 39328585 - 39328643
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| ||||||||||||||||||| || ||||||| ||||||||||    
T  39328585 gacaaaaacaaaacgatattcattcattcaaatcgatggattacatcaaatacaaacat 39328643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 558 - 595
Target Start/End: Original strand, 39171402 - 39171439
Alignment:
Q  558 attcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39171402 attcattcaaatcgatagagtacatcagatacaaacat 39171439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 14627672 - 14627719
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  14627672 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 14627719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 17611694 - 17611647
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  17611694 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatca 17611647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 26492668 - 26492621
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  26492668 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 26492621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 42066836 - 42066883
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  42066836 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 42066883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Complemental strand, 20083640 - 20083594
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| || ||||||||||||||||| |||||||||    
T  20083640 acaaaaacaaaatgatatttattcattcaaatcgatatagtacatca 20083594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Complemental strand, 32684970 - 32684924
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  32684970 acaaaaacaaaatgatattcattcattcaaatcgagagactacatca 32684924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Complemental strand, 34774013 - 34773967
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  34774013 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 34773967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Complemental strand, 35261599 - 35261553
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  35261599 acaaaaacagaatgatattcattcattcaaattgatagagtacatca 35261553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 45198808 - 45198854
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  45198808 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 45198854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 579
Target Start/End: Original strand, 48316610 - 48316652
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagta 579  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  48316610 gacaaaaacaaaacgatattcattcattcaaatcgatagagta 48316652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 537 - 577
Target Start/End: Complemental strand, 21266695 - 21266655
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagag 577  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  21266695 gacaaaaacaaaatgatattcattcattcaaatcgagagag 21266655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 540 - 592
Target Start/End: Original strand, 45349593 - 45349645
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    ||||| |||| ||| |||||| ||| |||||||||||||||||||||||||||    
T  45349593 aaaaaaaaaacgatattcattaatttaaatcgatagagtacatcagatacaaa 45349645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Original strand, 1448606 - 1448641
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    ||||||||||||||||| ||||||||||||||||||    
T  1448606 gacaaaaacaaaatgatattcattcattcaaatcga 1448641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 1485030 - 1485077
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  1485030 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 1485077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Original strand, 12502026 - 12502061
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12502026 gacaaaaacaaaatgatattcattcattcaaatcga 12502061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 572
Target Start/End: Original strand, 12527660 - 12527695
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcga 572  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12527660 gacaaaaacaaaatgatattcattcattcaaatcga 12527695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 20116884 - 20116837
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||| ||||||||| |||||||||||||||||| ||| |||||||    
T  20116884 gacaaaaccaaaatgatattcattcattcaaatcgagagattacatca 20116837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 588
Target Start/End: Original strand, 38880404 - 38880455
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 588  Q
    ||||||||||||| |||||||||| |||||||| | |||| |||||||||||    
T  38880404 gacaaaaacaaaacgatgttcatttattcaaattgttagaatacatcagata 38880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 46822318 - 46822271
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| || ||||||||||||||| ||| |||||||    
T  46822318 gacaaaaacaaaatgatattaattcattcaaatcgagagattacatca 46822271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 3267009 - 3267055
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| ||||||||||||||| | ||||||| ||||    
T  3267009 acaaaaacaaaatgatattcattcattcaaattgttagagtatatca 3267055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 588
Target Start/End: Original strand, 24069182 - 24069232
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 588  Q
    |||||||||||| ||| |||||| ||||||||||||||| ||| |||||||    
T  24069182 acaaaaacaaaacgatattcattgattcaaatcgatagaatacctcagata 24069232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 35495950 - 35495996
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||| ||||||||||||| ||| |||||||    
T  35495950 acaaaaacaaaatgatattcaatcattcaaatcgagagattacatca 35495996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 557 - 595
Target Start/End: Complemental strand, 47590591 - 47590553
Alignment:
Q  557 cattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  47590591 cattcattcaaatcgatagagtatatcagatataaacat 47590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 591
Target Start/End: Original strand, 3876033 - 3876086
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||||||||||||| ||| ||| ||||||| |||||| ||||||| ||||||    
T  3876033 acaaaaacaaaatgatattctttcgttcaaattgatagaatacatcaaatacaa 3876086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 584
Target Start/End: Complemental strand, 10574826 - 10574789
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  10574826 aaatgatattcattcattcaaattgatagagtacatca 10574789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 591
Target Start/End: Complemental strand, 11344119 - 11344066
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||||||||| ||| |||||| |||||||| |||| | ||||||||||||||    
T  11344119 acaaaaacaaaacgatattcatttattcaaattgatataatacatcagatacaa 11344066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 586
Target Start/End: Original strand, 41553227 - 41553276
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    ||||||||||||| ||| |||||||||||||||  ||||| |||||||||    
T  41553227 gacaaaaacaaaacgatattcattcattcaaattaatagaatacatcaga 41553276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 42978906 - 42978852
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| |||    |||||||||||| |||||||| ||||||||||||||||    
T  42978906 gacaaaaacaaaacgat----attcattcaaattgatagagtccatcagatacaaacat 42978852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 586
Target Start/End: Original strand, 3222897 - 3222945
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||||||||||||| |||||||||| |||| |||| | |||||||||    
T  3222897 acaaaaacaaaatgatattcattcatttaaattgatataatacatcaga 3222945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 569
Target Start/End: Original strand, 23425147 - 23425179
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaat 569  Q
    ||||||||||||||||| |||||||||||||||    
T  23425147 gacaaaaacaaaatgatattcattcattcaaat 23425179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 585
Target Start/End: Original strand, 24610050 - 24610098
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcag 585  Q
    |||||||| |||||||| ||||||||||||||| |||| | ||||||||    
T  24610050 gacaaaaataaaatgatattcattcattcaaattgatataatacatcag 24610098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 588
Target Start/End: Original strand, 25286982 - 25287030
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 588  Q
    ||||| |||| ||| || |||||||||||| ||||||||||||||||||    
T  25286982 aaaaataaaacgatatttattcattcaaattgatagagtacatcagata 25287030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 26017332 - 26017368
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  26017332 aaatgatattcattcattcaaattgatagagtacatc 26017368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 30992498 - 30992534
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  30992498 aaatgatattcattcattcaaattgatagagtacatc 30992534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 32312961 - 32312925
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  32312961 aaatgatattcattcattcaaattgatagagtacatc 32312925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 34893547 - 34893511
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  34893547 aaatgatattcattcattcaaattgatagagtacatc 34893511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 551 - 583
Target Start/End: Original strand, 42603443 - 42603475
Alignment:
Q  551 gatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||||||||||||||| |||||||||||||    
T  42603443 gatgttcattcattcaaattgatagagtacatc 42603475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 592
Target Start/End: Complemental strand, 46700331 - 46700279
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    |||||| ||| ||| ||||||||||| ||| ||||||||||||||| ||||||    
T  46700331 aaaaaccaaacgatattcattcattctaattgatagagtacatcaggtacaaa 46700279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 6011929 - 6011987
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  6011929 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 6011987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 9113516 - 9113574
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  9113516 gacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 9113574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 14726252 - 14726310
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  14726252 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacat 14726310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 38007654 - 38007596
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  38007654 gacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacat 38007596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 24229576 - 24229633
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  24229576 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatataaacat 24229633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 13007526 - 13007468
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||    
T  13007526 gacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacat 13007468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 14082188 - 14082245
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||    
T  14082188 acaaaaacaaaacgatatccattcattcaaatcgatagagcacatcagatacaaacat 14082245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 35851093 - 35851036
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||||| |||||||||||||||| ||||| || |||||||||||||||    
T  35851093 acaaaaacaaaatgatattcattcattcaaatcaatagattatatcagatacaaacat 35851036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 8096293 - 8096347
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  8096293 aaaaacaaaacgatattcattcattcaaatcgatagagtacat-agatacaaacat 8096347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 1409797 - 1409739
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||| |||||||| | |||||||||||||||||||||||    
T  1409797 gacaaaaacaaaacgatattcatttattcaaattggtagagtacatcagatacaaacat 1409739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 13422229 - 13422172
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||    
T  13422229 gacaaaaacaaaatgatattcattcattcaaattgataga-tacatcatatacaaacat 13422172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 26825727 - 26825669
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| ||| ||||||||||||||||||||||||| |||| ||||||||||    
T  26825727 gacaaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaaacat 26825669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 34945690 - 34945632
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| ||| ||| |||||| ||||||||||||||||||||||||||||||    
T  34945690 gacaaaaataaaacgatattctttcattaaaatcgatagagtacatcagatacaaacat 34945632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 555 - 595
Target Start/End: Complemental strand, 38598076 - 38598036
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  38598076 ttcattcattcaaattgatagagtacatcagatacaaacat 38598036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 11073779 - 11073835
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||||||| |||||||||||||||  ||||||||||||| ||||||||||    
T  11073779 gacaaaaataaaatgatattcattcattcaaat--atagagtacatcatatacaaacat 11073835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 21060057 - 21060104
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  21060057 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 21060104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 34882022 - 34881975
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  34882022 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 34881975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 584
Target Start/End: Complemental strand, 781692 - 781646
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||    
T  781692 acaaaaacaaaatgatattcattcattcaaatcgagagattacatca 781646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 587
Target Start/End: Original strand, 8088004 - 8088054
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagat 587  Q
    ||||||||||||||||| ||||||||||||||| |||||| | ||||||||    
T  8088004 gacaaaaacaaaatgatattcattcattcaaattgatagaatgcatcagat 8088054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 545 - 595
Target Start/End: Complemental strand, 25980446 - 25980396
Alignment:
Q  545 caaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||| |||||||    
T  25980446 caaaacgatattcattcattcaaatcgatagagtatatcagatgcaaacat 25980396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 539 - 584
Target Start/End: Original strand, 18677242 - 18677287
Alignment:
Q  539 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||||    
T  18677242 caaaaacaaaatgatattcattcattcaaatcgagagattacatca 18677287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 26877901 - 26877958
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||| ||||| ||| ||||||||||| ||| |||||||||||||| ||||||||||    
T  26877901 acaaaatcaaaacgatattcattcattcgaattgatagagtacatcatatacaaacat 26877958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 7242089 - 7242042
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  7242089 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 7242042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 7247264 - 7247217
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  7247264 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 7247217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 8984780 - 8984827
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||| ||| ||||||||||||||| |||||| |||||||    
T  8984780 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatca 8984827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 10649947 - 10649900
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  10649947 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 10649900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 592
Target Start/End: Complemental strand, 10723058 - 10723003
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    ||||||||||||| ||| || |||||||||||| ||| |||||||||| |||||||    
T  10723058 gacaaaaacaaaacgatatttattcattcaaattgatcgagtacatcaaatacaaa 10723003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 27752230 - 27752183
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||| ||||||| |||||||||||||||||| ||| |||||||    
T  27752230 gacaaaaacgaaatgatattcattcattcaaatcgagagattacatca 27752183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 30371926 - 30371879
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| ||||||||||||||| || ||| |||||||    
T  30371926 gacaaaaacaaaatgatattcattcattcaaatagagagattacatca 30371879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 537 - 583
Target Start/End: Original strand, 177754 - 177800
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    |||||||| |||||||| ||||||||||||||| ||| |||||||||    
T  177754 gacaaaaaaaaaatgatattcattcattcaaattgatggagtacatc 177800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 3271177 - 3271223
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||||    
T  3271177 acaaaaacaaaatgataatcattcattcaaatcgagagattacatca 3271223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 41184216 - 41184262
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| | |||||||||||||||| ||| |||||||    
T  41184216 acaaaaacaaaatgatatgcattcattcaaatcgagagattacatca 41184262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 43008090 - 43008136
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||| || |||||||||||||||||| ||| |||||||    
T  43008090 acaaaaacaaaataatattcattcattcaaatcgagagattacatca 43008136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 19280711 - 19280756
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||    
T  19280711 gacaaaaataaaatgatattcattcattcaaatcgagagattacat 19280756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 592
Target Start/End: Complemental strand, 4771150 - 4771099
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaa 592  Q
    |||||||||| ||| ||||||||||||||| ||||||||| || |||||||||    
T  4771150 aaaaacaaaacgatattcattcattcaaattgatagagtatat-agatacaaa 4771099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 5378742 - 5378706
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  5378742 aaatgatattcattcattcaaattgatagagtacatc 5378706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 17218163 - 17218127
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  17218163 aaatgatattcattcattcaaattgatagagtacatc 17218127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 578
Target Start/End: Original strand, 27576160 - 27576200
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagt 578  Q
    ||||||||||||  || ||||||||||||||||||||||||    
T  27576160 acaaaaacaaaacaatattcattcattcaaatcgatagagt 27576200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 574
Target Start/End: Original strand, 36057103 - 36057139
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgata 574  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  36057103 acaaaaataaaatgatattcattcattcaaatcgata 36057139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 40775201 - 40775165
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  40775201 aaatgatattcattcattcaaattgatagagtacatc 40775165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 7883030 - 7883088
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  7883030 gacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaaacat 7883088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 23230943 - 23230885
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  23230943 gacaaaagcaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 23230885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 539 - 595
Target Start/End: Original strand, 40211091 - 40211147
Alignment:
Q  539 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  40211091 caaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatataaacat 40211147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 27498155 - 27498213
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| ||||| || ||||||||||||||| |||||||||||||||||||||||||    
T  27498155 gacaaaaataaaataatattcattcattcaaattgatagagtacatcagatacaaacat 27498213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 30568110 - 30568168
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||    
T  30568110 gacaaaaacaaaatgatattcattcattcaaattgatagattacatcatatacaaacat 30568168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 40618862 - 40618920
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||||||||    
T  40618862 gacaaaaacaaaacgatattcattcattcaaattgatagaatacatcagatacaaacat 40618920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 537 - 586
Target Start/End: Original strand, 1236487 - 1236536
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  1236487 gacaaaaacaaaatgatattcattcattcaaatcgatagaatacatcaga 1236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 9637199 - 9637256
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||||    
T  9637199 acaaaaacaaaacgatattcattcatttaaattgatagagtacatcagatacaaacat 9637256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 16928547 - 16928604
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||| ||| || ||| |||||||||||||||||||||||||||||||||||||||||    
T  16928547 acaaagacagaacgatattcattcattcaaatcgatagagtacatcagatacaaacat 16928604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 539 - 595
Target Start/End: Original strand, 45445602 - 45445658
Alignment:
Q  539 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||| ||| ||||||||||||||||||| || ||||||||||||||||||    
T  45445602 caaaaacaaaacgatattcattcattcaaatcgatggattacatcagatacaaacat 45445658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 17693402 - 17693460
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||||| ||||||||||    
T  17693402 gacaaaaacaaaacgatattcattcactcaaattgatagagtacatcaaatacaaacat 17693460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 28086601 - 28086659
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| |||||| |||||||| |||| ||||||||||||||||||||    
T  28086601 gacaaaaacaaaacgatattcatttattcaaattgatatagtacatcagatacaaacat 28086659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 31013397 - 31013455
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| |||  ||||||||||| ||||||| ||||||||||||||||||||    
T  31013397 gacaaaaacaaaacgatagtcattcattcatatcgataaagtacatcagatacaaacat 31013455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 37971587 - 37971529
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| ||| |||||||| ||||||| ||||||||||||||||||||||||    
T  37971587 gacaaaaataaaacgatattcattcactcaaatcaatagagtacatcagatacaaacat 37971529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 540 - 593
Target Start/End: Original strand, 33214463 - 33214516
Alignment:
Q  540 aaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaac 593  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||    
T  33214463 aaaaacaaaacgatattcattcattcaaatcgatagagtacattagatataaac 33214516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 555 - 595
Target Start/End: Original strand, 25190872 - 25190912
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  25190872 ttcattcattcaaatcgatagattacatcagatacaaacat 25190912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 14906697 - 14906744
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  14906697 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatca 14906744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 8412311 - 8412369
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| |||| ||| |||||||||||||||| ||||| || |||||||||||||||    
T  8412311 gacaaaaataaaacgatattcattcattcaaatcaatagattaaatcagatacaaacat 8412369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 579
Target Start/End: Complemental strand, 10377974 - 10377932
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagta 579  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  10377974 gacaaaaacaaaacgatattcattcattcaaatcgatagagta 10377932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 588
Target Start/End: Original strand, 19443843 - 19443893
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 588  Q
    ||||||| |||| ||| ||||||||||||||| ||||||||||||||||||    
T  19443843 acaaaaataaaacgatattcattcattcaaattgatagagtacatcagata 19443893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 582
Target Start/End: Complemental strand, 3240681 - 3240636
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||||    
T  3240681 gacaaaaacaaaacgatgttcattcattcaaattgatagaatacat 3240636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 16247014 - 16247071
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||| |||||||| |||||| |||||||| ||| || ||||||||||||||||||    
T  16247014 acaaaaataaaatgatattcatttattcaaattgatggaatacatcagatacaaacat 16247071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 4809274 - 4809227
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  4809274 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 4809227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 9073028 - 9072981
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  9073028 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 9072981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Complemental strand, 29777529 - 29777482
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  29777529 gacaaaaataaaatgatattcattcattcaaatcgagagattacatca 29777482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 537 - 591
Target Start/End: Original strand, 470936 - 470990
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||||||||||  || |||||||||| |||| |||||| ||||||||||||||    
T  470936 gacaaaaacaaaacaatattcattcatttaaattgatagaatacatcagatacaa 470990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 541 - 583
Target Start/End: Original strand, 7579517 - 7579559
Alignment:
Q  541 aaaacaaaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||    
T  7579517 aaaactaaatgatattcattcattcaaattgatagagtacatc 7579559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 23851269 - 23851315
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||||    
T  23851269 acaaaaacaaaatgataatcattcattcaaatcgagagattacatca 23851315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 591
Target Start/End: Complemental strand, 8868118 - 8868065
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||| ||||| ||  ||||||||||||||| |||||| ||||||||||||||    
T  8868118 acaaaagcaaaacgacattcattcattcaaattgatagaatacatcagatacaa 8868065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 584
Target Start/End: Original strand, 9799685 - 9799722
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  9799685 aaatgatattcattcattcaaattgatagagtacatca 9799722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 586
Target Start/End: Complemental strand, 15344609 - 15344560
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||||| |||||||| || |||||||||||| |||||| |||||||||    
T  15344609 gacaaaaataaaatgatatttattcattcaaattgatagaatacatcaga 15344560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 586
Target Start/End: Complemental strand, 15433674 - 15433625
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||||| |||||||| || |||||||||||| |||||| |||||||||    
T  15433674 gacaaaaataaaatgatatttattcattcaaattgatagaatacatcaga 15433625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 586
Target Start/End: Complemental strand, 15524978 - 15524929
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||||| |||||||| || |||||||||||| |||||| |||||||||    
T  15524978 gacaaaaataaaatgatatttattcattcaaattgatagaatacatcaga 15524929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 586
Target Start/End: Original strand, 24099046 - 24099095
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    ||||||||||||| ||| ||||||||||||||| || ||| |||||||||    
T  24099046 gacaaaaacaaaacgatattcattcattcaaattgacagaatacatcaga 24099095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 550 - 595
Target Start/End: Original strand, 24186463 - 24186508
Alignment:
Q  550 tgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||| |||||| |||||||| |||||||||||||| ||||||||||    
T  24186463 tgattttcatttattcaaatagatagagtacatcatatacaaacat 24186508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 575
Target Start/End: Complemental strand, 28240150 - 28240113
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatag 575  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  28240150 acaaaaacaaactgatattcattcattcaaatcgatag 28240113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 591
Target Start/End: Complemental strand, 29939599 - 29939547
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||||||||  || |||||| ||||||||||||| ||||||||||||||||    
T  29939599 acaaaaacaaaac-atattcatttattcaaatcgatatagtacatcagatacaa 29939547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 591
Target Start/End: Complemental strand, 34610146 - 34610093
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||||||||| ||| || |||||||||||| |||| | ||||||||||||||    
T  34610146 acaaaaacaaaacgatatttattcattcaaattgatataatacatcagatacaa 34610093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Complemental strand, 5457511 - 5457475
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  5457511 aaatgatattcattcattcaaattgatagagtacatc 5457475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 591
Target Start/End: Original strand, 24842742 - 24842786
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||| |||||||||| |||||||||||||| |||| ||||||    
T  24842742 aaatgatattcattcattaaaatcgatagagtatatcaaatacaa 24842786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 28296783 - 28296819
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  28296783 aaatgatattcattcattcaaattgatagagtacatc 28296819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 547 - 583
Target Start/End: Original strand, 31712748 - 31712784
Alignment:
Q  547 aaatgatgttcattcattcaaatcgatagagtacatc 583  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  31712748 aaatgatattcattcattcaaattgatagagtacatc 31712784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 582
Target Start/End: Original strand, 39152917 - 39152961
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacat 582  Q
    ||||||| |||| ||| |||||||||||||||||||| |||||||    
T  39152917 acaaaaataaaacgatattcattcattcaaatcgataaagtacat 39152961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 555 - 595
Target Start/End: Complemental strand, 41684655 - 41684615
Alignment:
Q  555 ttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||| |||| |||||||||||||||||| ||||||    
T  41684655 ttcattcatttaaattgatagagtacatcagatataaacat 41684615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 585
Target Start/End: Complemental strand, 42046531 - 42046484
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcag 585  Q
    ||||||||||||  ||| |||||||||||||||||||||| ||||||||    
T  42046531 gacaaaaacaaag-gatattcattcattcaaatcgatagaatacatcag 42046484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 71661 - 71719
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| |||  ||| |||||||||| |||||||||||||||||||||||||    
T  71661 gacaaaaacaaaaagatactcagtcattcaaattgatagagtacatcagatacaaacat 71719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 201148 - 201194
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||    
T  201148 acaaaaacaaaatgatattcattcattcaaatcgatagattacatca 201194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 1765 - 1822
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||| ||||||||||| |||||||||||||||||||||| | |||||| |||||||||    
T  1765 acaataacaaaatgatattcattcattcaaatcgatagaatgcatcaggtacaaacat 1822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 9834 - 9891
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||| ||||||  || ||||||||||||||||||||||||||| |||||||||||||    
T  9834 acaaagacaaaacaatattcattcattcaaatcgatagagtacaccagatacaaacat 9891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 31066 - 31123
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||| |||| ||| ||||||||||||||| |||| ||||||||||||||||||||    
T  31066 acaaaaataaaacgatattcattcattcaaattgatatagtacatcagatacaaacat 31123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 591
Target Start/End: Complemental strand, 8025 - 7971
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    |||||||| |||| ||| ||||||||||||||| |||||||||||||| ||||||    
T  8025 gacaaaaaaaaaacgatattcattcattcaaattgatagagtacatcaaatacaa 7971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 595
Target Start/End: Complemental strand, 15790 - 15732
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    ||||||||||||| ||| || |||| ||||||||||| ||||||||||| |||||||||    
T  15790 gacaaaaacaaaacgatatttattccttcaaatcgattgagtacatcagttacaaacat 15732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 14664 - 14720
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||||||||||  ||||||||||||||| |||| ||||||||| ||||||||||    
T  14664 acaaaaacaaaatgaa-ttcattcattcaaattgataaagtacatcatatacaaacat 14720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 26827 - 26874
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||| |||||||| |||||||||| |||| ||||||||||||||    
T  26827 gacaaaaataaaatgatattcattcattaaaattgatagagtacatca 26874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 584
Target Start/End: Original strand, 53192 - 53239
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    ||||||||||||| ||| ||||||||||||||| |||| |||||||||    
T  53192 gacaaaaacaaaacgatattcattcattcaaattgatatagtacatca 53239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 588
Target Start/End: Complemental strand, 93413 - 93364
Alignment:
Q  539 caaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagata 588  Q
    |||||| |||||||| ||||||||||||||| |||| | |||||||||||    
T  93413 caaaaataaaatgatattcattcattcaaattgataaaatacatcagata 93364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 542 - 584
Target Start/End: Complemental strand, 8989 - 8947
Alignment:
Q  542 aaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||| |||||||||||||||||| ||| |||||||    
T  8989 aaacaaaatgatattcattcattcaaatcgagagattacatca 8947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 83212 - 83258
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatca 584  Q
    |||||||||||||||| |||||||||||||||| | ||| |||||||    
T  83212 acaaaaacaaaatgatattcattcattcaaatcaagagattacatca 83258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 537 - 591
Target Start/End: Complemental strand, 4455 - 4401
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcagatacaa 591  Q
    ||||||| |||||| || ||||||||||||||| |||| | ||||||||||||||    
T  4455 gacaaaagcaaaataatattcattcattcaaattgataaaatacatcagatacaa 4401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 561 - 595
Target Start/End: Original strand, 32562 - 32596
Alignment:
Q  561 cattcaaatcgatagagtacatcagatacaaacat 595  Q
    |||||||| ||||||||||||||||||||||||||    
T  32562 cattcaaaacgatagagtacatcagatacaaacat 32596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 578
Target Start/End: Complemental strand, 1670 - 1629
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaatcgatagagt 578  Q
    ||||||||||||| ||| |||||||||||||||| |||||||    
T  1670 gacaaaaacaaaacgatattcattcattcaaatcaatagagt 1629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 537 - 569
Target Start/End: Original strand, 16094 - 16126
Alignment:
Q  537 gacaaaaacaaaatgatgttcattcattcaaat 569  Q
    ||||||||||||||||| |||||||||||||||    
T  16094 gacaaaaacaaaatgatattcattcattcaaat 16126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 538 - 586
Target Start/End: Original strand, 57881 - 57929
Alignment:
Q  538 acaaaaacaaaatgatgttcattcattcaaatcgatagagtacatcaga 586  Q
    |||||||||||| ||| |||||||||| |||| |||||| |||||||||    
T  57881 acaaaaacaaaacgatattcattcatttaaattgatagaatacatcaga 57929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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