View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6876A_low_68 (Length: 372)
Name: NF6876A_low_68
Description: NF6876A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6876A_low_68 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 80 - 368
Target Start/End: Original strand, 39126085 - 39126373
Alignment:
| Q |
80 |
tttaaaaagtggaagagccggaggatattcgatgtcaattaggatgtgatttttgatctacgtacccatcatcaatatttttagaatatctaaaagtctt |
179 |
Q |
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| T |
39126085 |
tttaaaaagtggaagagccggaggatatttgatgtcaattaggatgtgatttttgatctacgtacccatcatcaatatttttagaatatctaaaagtctt |
39126184 |
T |
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| Q |
180 |
aaaaaccttcacaataattatttggaaaaagataattttattcacagtaattatgaattttccatgtcaatttaaattaactttgagacctcaattcttt |
279 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |
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| T |
39126185 |
aaaaaccttcacaataattatttggaaaaagataattttattcacagtaattatgaattttccatgtcaatttaaattaactttgagatctcaatttttt |
39126284 |
T |
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| Q |
280 |
aaccacttataaaaaacttttccgtgaacattgtaagtttagaacgattttttacaaaccaataaatcataaatattattcaattgctc |
368 |
Q |
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| T |
39126285 |
aaccacttataaaaaacttttccgtgaacattgtaagtttagaatgattttttacaaaccaataaatcataaatattattcaattgctc |
39126373 |
T |
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