View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6879_low_11 (Length: 360)

Name: NF6879_low_11
Description: NF6879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6879_low_11
NF6879_low_11
[»] chr1 (58 HSPs)
chr1 (134-344)||(4412956-4413172)
chr1 (22-209)||(45415352-45415548)
chr1 (19-206)||(7337762-7337959)
chr1 (46-210)||(29738771-29738936)
chr1 (19-209)||(31983973-31984171)
chr1 (53-175)||(32394826-32394947)
chr1 (46-211)||(11462582-11462749)
chr1 (46-210)||(5983628-5983794)
chr1 (22-209)||(15434977-15435171)
chr1 (19-209)||(34878377-34878570)
chr1 (46-209)||(49626703-49626866)
chr1 (15-209)||(44915438-44915636)
chr1 (32-209)||(51916773-51916951)
chr1 (19-155)||(35462136-35462283)
chr1 (19-209)||(1742074-1742274)
chr1 (19-171)||(48750021-48750171)
chr1 (72-209)||(10776620-10776759)
chr1 (55-175)||(8212055-8212175)
chr1 (53-172)||(14872469-14872589)
chr1 (46-172)||(21947753-21947880)
chr1 (46-149)||(23291778-23291881)
chr1 (56-167)||(36894388-36894498)
chr1 (49-172)||(45789395-45789516)
chr1 (46-165)||(16161669-16161787)
chr1 (53-209)||(18939115-18939269)
chr1 (54-209)||(35484535-35484677)
chr1 (53-209)||(26535193-26535343)
chr1 (70-157)||(34413251-34413338)
chr1 (53-135)||(13144955-13145036)
chr1 (71-209)||(27456333-27456472)
chr1 (54-167)||(940200-940312)
chr1 (106-175)||(3228097-3228166)
chr1 (101-203)||(7836957-7837059)
chr1 (46-153)||(12635016-12635123)
chr1 (50-129)||(36775857-36775934)
chr1 (46-209)||(44543066-44543227)
chr1 (46-156)||(9341571-9341680)
chr1 (53-168)||(15836027-15836141)
chr1 (73-153)||(34528568-34528645)
chr1 (70-209)||(568944-569082)
chr1 (70-152)||(50377177-50377257)
chr1 (54-126)||(31918865-31918937)
chr1 (138-207)||(41176977-41177046)
chr1 (46-96)||(37720257-37720307)
chr1 (70-155)||(19060749-19060833)
chr1 (70-167)||(21686708-21686803)
chr1 (20-85)||(33703497-33703562)
chr1 (19-74)||(7836895-7836951)
chr1 (60-160)||(32679250-32679349)
chr1 (46-96)||(15492196-15492247)
chr1 (46-120)||(47132782-47132856)
chr1 (27-156)||(13691752-13691881)
chr1 (53-136)||(27580270-27580354)
chr1 (70-171)||(31692625-31692724)
chr1 (54-167)||(34479328-34479439)
chr1 (53-152)||(31317601-31317699)
chr1 (70-158)||(33291541-33291627)
chr1 (60-171)||(43412203-43412311)
[»] chr8 (47 HSPs)
chr8 (22-209)||(31013681-31013868)
chr8 (22-209)||(37971087-37971272)
chr8 (46-210)||(23230435-23230600)
chr8 (53-209)||(20559887-20560041)
chr8 (53-209)||(20571449-20571603)
chr8 (55-209)||(28897503-28897657)
chr8 (46-209)||(7883374-7883537)
chr8 (77-207)||(10377491-10377620)
chr8 (53-209)||(27110605-27110761)
chr8 (56-160)||(29937956-29938059)
chr8 (46-157)||(18890840-18890950)
chr8 (53-172)||(20553387-20553505)
chr8 (46-175)||(40211438-40211569)
chr8 (70-209)||(25191225-25191363)
chr8 (46-166)||(1239537-1239657)
chr8 (77-206)||(3673241-3673368)
chr8 (73-160)||(8981038-8981125)
chr8 (20-207)||(14545001-14545198)
chr8 (45-209)||(15344098-15344262)
chr8 (45-209)||(15433163-15433327)
chr8 (45-209)||(15524467-15524631)
chr8 (80-209)||(17693782-17693910)
chr8 (47-209)||(33214767-33214928)
chr8 (54-209)||(45445954-45446108)
chr8 (50-135)||(14585565-14585650)
chr8 (49-148)||(40619210-40619307)
chr8 (46-171)||(8443655-8443779)
chr8 (46-160)||(7677415-7677528)
chr8 (46-117)||(24186792-24186864)
chr8 (50-171)||(41896344-41896461)
chr8 (98-160)||(1236879-1236941)
chr8 (54-171)||(8826038-8826156)
chr8 (46-160)||(3240216-3240332)
chr8 (53-174)||(44091889-44092008)
chr8 (54-149)||(26469339-26469430)
chr8 (107-171)||(14916332-14916395)
chr8 (49-155)||(24099399-24099504)
chr8 (49-154)||(5046597-5046701)
chr8 (77-209)||(8412510-8412646)
chr8 (20-126)||(1215326-1215432)
chr8 (74-149)||(8867681-8867755)
chr8 (28-158)||(14530903-14531033)
chr8 (28-126)||(32920673-32920771)
chr8 (53-96)||(36948579-36948622)
chr8 (28-94)||(21237702-21237771)
chr8 (47-95)||(8237320-8237368)
chr8 (27-86)||(18190838-18190898)
[»] chr3 (71 HSPs)
chr3 (19-207)||(10232862-10233059)
chr3 (19-207)||(9998258-9998456)
chr3 (19-207)||(10108030-10108225)
chr3 (49-207)||(21431417-21431574)
chr3 (20-206)||(6954796-6954992)
chr3 (19-207)||(36461530-36461728)
chr3 (19-209)||(45568544-45568743)
chr3 (46-209)||(47895941-47896105)
chr3 (19-209)||(40487115-40487314)
chr3 (19-207)||(10229266-10229465)
chr3 (46-209)||(35865070-35865232)
chr3 (54-160)||(54148827-54148933)
chr3 (46-209)||(33579658-33579821)
chr3 (55-207)||(40556503-40556655)
chr3 (54-206)||(47042196-47042348)
chr3 (53-206)||(48650877-48651031)
chr3 (53-206)||(52923260-52923411)
chr3 (54-209)||(43488734-43488896)
chr3 (56-209)||(9797675-9797826)
chr3 (55-160)||(7449047-7449152)
chr3 (55-160)||(7457189-7457294)
chr3 (46-210)||(12050782-12050948)
chr3 (77-206)||(32701291-32701420)
chr3 (54-209)||(21533953-21534107)
chr3 (53-129)||(36910784-36910860)
chr3 (19-166)||(51303749-51303894)
chr3 (10-171)||(629003-629167)
chr3 (19-175)||(20608998-20609162)
chr3 (50-160)||(21289961-21290069)
chr3 (46-171)||(29921880-29922006)
chr3 (46-171)||(29971033-29971159)
chr3 (19-118)||(51923611-51923709)
chr3 (53-175)||(20465113-20465232)
chr3 (46-153)||(50194419-50194526)
chr3 (56-175)||(23800055-23800176)
chr3 (70-136)||(37040634-37040700)
chr3 (50-160)||(42460585-42460695)
chr3 (20-175)||(26275907-26276058)
chr3 (53-173)||(9319884-9320002)
chr3 (70-166)||(7546443-7546540)
chr3 (46-174)||(31271942-31272071)
chr3 (73-209)||(43016645-43016782)
chr3 (105-209)||(38545625-38545729)
chr3 (45-167)||(12149918-12150039)
chr3 (54-154)||(53508067-53508165)
chr3 (46-119)||(20987934-20988008)
chr3 (54-151)||(38860263-38860361)
chr3 (50-149)||(16235269-16235367)
chr3 (67-147)||(45424669-45424743)
chr3 (77-129)||(953566-953618)
chr3 (46-163)||(35175233-35175352)
chr3 (70-158)||(25631650-25631735)
chr3 (50-171)||(8914532-8914653)
chr3 (73-158)||(4396495-4396577)
chr3 (70-154)||(29239183-29239266)
chr3 (20-127)||(37051644-37051751)
chr3 (72-146)||(3785706-3785778)
chr3 (81-171)||(4821635-4821726)
chr3 (70-158)||(4178431-4178516)
chr3 (70-158)||(38855160-38855244)
chr3 (70-158)||(46934509-46934594)
chr3 (67-160)||(51486941-51487032)
chr3 (51-96)||(1649322-1649367)
chr3 (34-126)||(1806461-1806553)
chr3 (20-85)||(36540660-36540725)
chr3 (46-154)||(52116146-52116253)
chr3 (20-52)||(9797629-9797661)
chr3 (46-93)||(12947416-12947464)
chr3 (53-113)||(22290823-22290883)
chr3 (53-145)||(29249098-29249188)
chr3 (22-85)||(53426859-53426923)
[»] chr6 (32 HSPs)
chr6 (19-207)||(33053267-33053465)
chr6 (22-209)||(12170286-12170483)
chr6 (46-209)||(3913709-3913872)
chr6 (19-207)||(605997-606195)
chr6 (19-207)||(23128411-23128609)
chr6 (34-222)||(30894414-30894604)
chr6 (53-207)||(68144-68297)
chr6 (46-175)||(34018385-34018515)
chr6 (46-210)||(7515336-7515502)
chr6 (85-175)||(29320037-29320127)
chr6 (50-171)||(545854-545973)
chr6 (46-158)||(30776508-30776619)
chr6 (54-171)||(32059738-32059853)
chr6 (47-171)||(32191868-32191993)
chr6 (55-175)||(30608659-30608777)
chr6 (54-209)||(29255586-29255741)
chr6 (53-120)||(32327360-32327427)
chr6 (49-160)||(14801047-14801157)
chr6 (51-160)||(1523248-1523354)
chr6 (46-160)||(8102557-8102673)
chr6 (57-172)||(24227858-24227974)
chr6 (46-155)||(30493378-30493484)
chr6 (60-153)||(528502-528596)
chr6 (70-158)||(33740701-33740786)
chr6 (77-143)||(34222653-34222717)
chr6 (19-155)||(127521-127661)
chr6 (117-209)||(32328790-32328882)
chr6 (70-158)||(12652809-12652894)
chr6 (54-155)||(678951-679050)
chr6 (49-157)||(28981022-28981127)
chr6 (105-158)||(34489117-34489170)
chr6 (54-129)||(22571361-22571434)
[»] chr4 (61 HSPs)
chr4 (46-209)||(2520587-2520751)
chr4 (19-207)||(4142854-4143051)
chr4 (19-207)||(19853611-19853808)
chr4 (19-207)||(22610996-22611193)
chr4 (19-208)||(43510010-43510207)
chr4 (46-210)||(22558599-22558765)
chr4 (57-207)||(53810840-53810990)
chr4 (23-209)||(21686344-21686539)
chr4 (19-156)||(32766377-32766524)
chr4 (19-209)||(26633770-26633969)
chr4 (19-209)||(13633924-13634125)
chr4 (57-167)||(24099217-24099328)
chr4 (53-209)||(5119148-5119305)
chr4 (54-160)||(56040788-56040896)
chr4 (46-206)||(35348119-35348278)
chr4 (53-209)||(54021671-54021827)
chr4 (19-171)||(27651796-27651947)
chr4 (53-209)||(26091057-26091212)
chr4 (70-209)||(9178167-9178306)
chr4 (70-209)||(9165202-9165342)
chr4 (70-209)||(10496152-10496290)
chr4 (46-171)||(51888352-51888477)
chr4 (46-166)||(47320537-47320657)
chr4 (34-166)||(18935640-18935770)
chr4 (19-160)||(36194572-36194712)
chr4 (53-209)||(45418339-45418492)
chr4 (53-209)||(29961068-29961228)
chr4 (19-209)||(33920862-33921061)
chr4 (54-166)||(36161567-36161676)
chr4 (54-129)||(9713798-9713872)
chr4 (46-171)||(22038936-22039059)
chr4 (70-210)||(22300654-22300793)
chr4 (77-149)||(22063948-22064019)
chr4 (19-171)||(36204487-36204641)
chr4 (13-119)||(1621601-1621707)
chr4 (46-156)||(9643241-9643354)
chr4 (55-152)||(10259040-10259136)
chr4 (54-175)||(37030109-37030228)
chr4 (54-126)||(43095521-43095595)
chr4 (78-152)||(21225344-21225417)
chr4 (54-120)||(44596563-44596629)
chr4 (19-209)||(53443936-53444128)
chr4 (108-165)||(48257647-48257704)
chr4 (20-175)||(23926013-23926168)
chr4 (19-94)||(52978749-52978833)
chr4 (73-158)||(18048749-18048831)
chr4 (76-152)||(21231603-21231678)
chr4 (53-117)||(40066198-40066262)
chr4 (54-93)||(4937757-4937796)
chr4 (20-86)||(36804544-36804611)
chr4 (70-154)||(43154144-43154224)
chr4 (29-94)||(8009441-8009506)
chr4 (49-129)||(9634564-9634645)
chr4 (19-52)||(17949423-17949456)
chr4 (19-52)||(17953275-17953308)
chr4 (45-94)||(37188690-37188739)
chr4 (70-107)||(52944223-52944260)
chr4 (27-126)||(11817093-11817192)
chr4 (76-148)||(21223447-21223518)
chr4 (72-112)||(31891451-31891490)
chr4 (46-149)||(47158098-47158201)
[»] chr7 (42 HSPs)
chr7 (19-207)||(30756918-30757116)
chr7 (19-171)||(35132781-35132932)
chr7 (46-210)||(12141442-12141608)
chr7 (46-210)||(48061213-48061379)
chr7 (19-153)||(34899706-34899850)
chr7 (56-209)||(9450283-9450436)
chr7 (46-209)||(37837594-37837757)
chr7 (46-175)||(48316947-48317077)
chr7 (72-209)||(8013627-8013764)
chr7 (19-209)||(42978400-42978602)
chr7 (19-174)||(19296705-19296862)
chr7 (22-209)||(19404859-19405053)
chr7 (19-209)||(13797031-13797230)
chr7 (53-172)||(39171734-39171854)
chr7 (19-171)||(1749253-1749402)
chr7 (50-171)||(22742768-22742888)
chr7 (19-207)||(40992976-40993174)
chr7 (19-198)||(24770058-24770238)
chr7 (50-166)||(24350984-24351099)
chr7 (50-209)||(4529871-4530030)
chr7 (19-160)||(47590155-47590303)
chr7 (19-124)||(48930657-48930758)
chr7 (46-160)||(28476064-28476175)
chr7 (70-158)||(38798630-38798717)
chr7 (46-160)||(5078531-5078643)
chr7 (70-159)||(45349963-45350051)
chr7 (49-160)||(38051207-38051316)
chr7 (53-175)||(5348732-5348848)
chr7 (78-155)||(25255084-25255159)
chr7 (27-115)||(46699931-46700019)
chr7 (22-76)||(8001648-8001703)
chr7 (49-175)||(25287325-25287446)
chr7 (62-158)||(26583583-26583676)
chr7 (54-167)||(39328937-39329050)
chr7 (72-166)||(11343635-11343726)
chr7 (70-154)||(1769345-1769428)
chr7 (54-129)||(5775084-5775160)
chr7 (70-126)||(5792672-5792728)
chr7 (55-155)||(26610890-26610987)
chr7 (60-136)||(27996954-27997029)
chr7 (73-136)||(35665295-35665358)
chr7 (20-108)||(43098618-43098704)
[»] scaffold0127 (1 HSPs)
scaffold0127 (53-209)||(15282-15437)
[»] chr5 (35 HSPs)
chr5 (19-207)||(13007020-13007218)
chr5 (19-209)||(38597587-38597786)
chr5 (53-207)||(6012281-6012435)
chr5 (23-209)||(7036017-7036204)
chr5 (53-207)||(34945213-34945367)
chr5 (22-207)||(9113827-9114022)
chr5 (19-207)||(26825220-26825419)
chr5 (54-209)||(26878223-26878377)
chr5 (53-197)||(31391899-31392044)
chr5 (54-209)||(38007147-38007300)
chr5 (50-171)||(2979453-2979573)
chr5 (50-171)||(39567123-39567243)
chr5 (27-155)||(14211076-14211201)
chr5 (53-205)||(25979951-25980103)
chr5 (54-168)||(10722603-10722718)
chr5 (53-209)||(11074043-11074199)
chr5 (46-152)||(8096633-8096738)
chr5 (53-197)||(6216696-6216844)
chr5 (29-149)||(13421792-13421912)
chr5 (46-155)||(10332687-10332798)
chr5 (19-166)||(14082472-14082627)
chr5 (46-126)||(24229920-24230000)
chr5 (46-209)||(11977072-11977236)
chr5 (19-175)||(15571309-15571475)
chr5 (50-128)||(19103614-19103691)
chr5 (50-171)||(28541053-28541167)
chr5 (49-154)||(41630350-41630451)
chr5 (88-210)||(35850573-35850694)
chr5 (54-136)||(14726606-14726689)
chr5 (70-158)||(28235457-28235542)
chr5 (54-167)||(7930026-7930139)
chr5 (70-157)||(8088373-8088458)
chr5 (70-158)||(42579749-42579837)
chr5 (88-155)||(11867524-11867590)
chr5 (19-58)||(28386885-28386924)
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-207)||(71963-72161)
[»] chr2 (50 HSPs)
chr2 (53-207)||(4778555-4778709)
chr2 (19-207)||(9169358-9169554)
chr2 (19-207)||(4098905-4099103)
chr2 (53-207)||(7646274-7646429)
chr2 (19-171)||(10237323-10237474)
chr2 (57-209)||(31788256-31788408)
chr2 (19-207)||(7448050-7448247)
chr2 (47-209)||(36943261-36943423)
chr2 (22-198)||(37876709-37876886)
chr2 (19-206)||(27097506-27097701)
chr2 (46-209)||(18763268-18763430)
chr2 (60-209)||(1421471-1421624)
chr2 (46-175)||(38445001-38445130)
chr2 (19-209)||(7677973-7678177)
chr2 (46-172)||(43397256-43397381)
chr2 (46-209)||(11985366-11985529)
chr2 (46-160)||(12648060-12648174)
chr2 (19-155)||(1415419-1415557)
chr2 (53-158)||(4041738-4041842)
chr2 (50-160)||(3308788-3308897)
chr2 (53-155)||(19062496-19062597)
chr2 (46-210)||(5428003-5428168)
chr2 (70-171)||(32448783-32448882)
chr2 (54-171)||(14955361-14955477)
chr2 (19-172)||(29279670-29279833)
chr2 (105-209)||(12677491-12677595)
chr2 (46-160)||(29574770-29574883)
chr2 (77-207)||(8809084-8809213)
chr2 (70-171)||(11833322-11833423)
chr2 (54-209)||(35220131-35220281)
chr2 (70-171)||(37994113-37994212)
chr2 (49-160)||(24461288-24461396)
chr2 (70-158)||(6436459-6436546)
chr2 (60-175)||(30400188-30400304)
chr2 (70-155)||(19029068-19029151)
chr2 (70-154)||(17994876-17994960)
chr2 (54-126)||(23933766-23933837)
chr2 (46-208)||(4904281-4904434)
chr2 (53-107)||(31128923-31128977)
chr2 (70-171)||(18107898-18107997)
chr2 (10-152)||(29173810-29173962)
chr2 (69-136)||(33760357-33760422)
chr2 (46-129)||(36691755-36691837)
chr2 (53-154)||(39310996-39311093)
chr2 (138-209)||(31128976-31129047)
chr2 (70-135)||(42949610-42949673)
chr2 (70-175)||(5071408-5071512)
chr2 (96-157)||(28718134-28718194)
chr2 (53-109)||(25509208-25509264)
chr2 (56-96)||(28227832-28227872)
[»] scaffold0017 (1 HSPs)
scaffold0017 (53-209)||(32891-33047)
[»] scaffold0088 (1 HSPs)
scaffold0088 (19-207)||(50578-50776)
[»] scaffold0884 (1 HSPs)
scaffold0884 (46-210)||(2107-2272)
[»] scaffold0445 (1 HSPs)
scaffold0445 (46-205)||(1138-1297)
[»] scaffold0888 (1 HSPs)
scaffold0888 (22-160)||(1787-1924)
[»] scaffold0219 (1 HSPs)
scaffold0219 (54-209)||(14982-15137)
[»] scaffold0009 (1 HSPs)
scaffold0009 (46-160)||(58215-58329)
[»] scaffold0603 (1 HSPs)
scaffold0603 (53-175)||(7541-7661)
[»] scaffold0087 (1 HSPs)
scaffold0087 (106-209)||(25525-25628)
[»] scaffold0049 (1 HSPs)
scaffold0049 (19-202)||(71399-71569)
[»] scaffold0039 (1 HSPs)
scaffold0039 (73-171)||(92928-93025)
[»] scaffold0154 (1 HSPs)
scaffold0154 (53-208)||(25124-25280)
[»] scaffold0492 (1 HSPs)
scaffold0492 (53-168)||(12747-12861)
[»] scaffold0554 (1 HSPs)
scaffold0554 (60-206)||(10672-10815)
[»] scaffold0121 (1 HSPs)
scaffold0121 (53-126)||(31413-31486)
[»] scaffold0634 (1 HSPs)
scaffold0634 (45-167)||(8346-8467)
[»] scaffold0136 (2 HSPs)
scaffold0136 (53-117)||(37929-37992)
scaffold0136 (20-175)||(10142-10304)
[»] scaffold0618 (1 HSPs)
scaffold0618 (53-174)||(7902-8021)
[»] scaffold0262 (1 HSPs)
scaffold0262 (53-172)||(1961-2079)
[»] scaffold0426 (1 HSPs)
scaffold0426 (65-155)||(6210-6297)
[»] scaffold0347 (1 HSPs)
scaffold0347 (73-118)||(5894-5938)


Alignment Details
Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 134 - 344
Target Start/End: Complemental strand, 4413172 - 4412956
Alignment:
Q  134 aaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctctagaaa--cctagaaaatgtcaat 231  Q
    ||||||||||||||||| || |||||| ||| || |||| ||       ||||||||| |||||  |||||||||||  |||  ||||||||||||||||    
T  4413172 aaagaatgacctaaaactactcctcctcgataaacgaagaagaaagaaagtttagagaaaagttagagtttctctctctaaagacctagaaaatgtcaat 4413073  T
Q  232 tattcacgtctctttatctttgaaaattctttgcagtataaatttct----ctagtgaaattgccactagcacatgaaagatagtaatataaattttgta 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4413072 tattcacgtctctttatctttgaaaattctttgcagtataaatttctttctctagtgaaattgccactagcacatgaaagatagtaatataaatttcgta 4412973  T
Q  328 ttgttgaatgatattct 344  Q
    |||||||||||||||||    
T  4412972 ttgttgaatgatattct 4412956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 45415548 - 45415352
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaagaa---------aaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagat 112  Q
    |||||||||||||||||||||| |||||||| ||         ||||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||    
T  45415548 aacgccgcacttagacgacgaaatcacaaaaaaacacaagaaaaaacttgatagatgtgaaaaccacttatttaaattgaaagaaaaggggaaaaaagat 45415449  T
Q  113 gtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||| ||| || |||| ||       ||||| |||||||||||||||||||||    
T  45415448 gtagaggggtgattctagatcaaaaaatgacctaaaaccacccctcctcgataaacgaagaagaaagaaagtttaaagagaagttgaagtttctctc 45415352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 7337762 - 7337959
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||| ||| ||||||||          |||||||||||||||| |||||| |||||||||||||||||||| ||| |||||||    
T  7337762 cacaacgccgcacttagacgatgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagaggaaaaa 7337861  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttct 206  Q
    |||||||||||||||||||||  ||||| |||||| || ||||| ||||||| |||||| |||||||       ||||||||||||||||||||||||    
T  7337862 agatgtagaggggtgattctagatcaaaaaatgacatagaaccatccctcctcgatgaacgaaggagaaagaaagtttagagagaagttgaagtttct 7337959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 29738771 - 29738936
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||| || ||| | |||||    
T  29738771 cacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaaggggaaaaagatgtagaggggtgattctaggtaaaaaattgacc 29738870  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
    |||||||||||||||| |||||| |||||||       ||||||||||| |||| |||||||||||    
T  29738871 taaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagatgttggagtttctctct 29738936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 31984171 - 31983973
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa--------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaag 110  Q
    ||||||||||||||||||||||||| ||||||||        ||||||||||||| || |||||| ||||||||||||| |||||| ||||| |||||||    
T  31984171 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaggaaaaacttgatatatgtgaaaaccacttatttagatcgaaagaaaagggaaaaaaag 31984072  T
Q  111 atgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||| |||| ||||| |||||| ||||||||||||||||| ||||| ||||||  ||| ||       |||||||||||||||| ||||||||||    
T  31984071 atgtagagaggtgcttctaggtcaaaaaatgacctaaaaccacctctccttgatgaacaaagaagaaagaaagtttagagagaagttggagtttctctc 31983973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 32394947 - 32394826
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| |||||| |||| ||||||||||||||| ||||||||||| |||| |||||| ||||||||||||||| |||||||||||||||    
T  32394947 gaaaaacttgatagatgtgaaaaccactcatttagattgaaagaaaaggggaaaaa-gatgcagagggatgattctaagtcaaaaaatgacctaaaacca 32394849  T
Q  153 cccctcctagatgaatgaaggag 175  Q
    |||||||| |||||| |||||||    
T  32394848 cccctcctcgatgaacgaaggag 32394826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 11462582 - 11462749
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaa-ggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||||||| |||||||||| |||||  |||||||||||||||||||| || |||||||||||||| ||||||||||||||| |||||| ||| ||    
T  11462582 cacaaaagaaaaaacttgatagatgtgaaacccacttatttagattgaaagaaaaaggggaaaaaagatgcagaggggtgattctaggtcaaaaaataac 11462681  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctcta 211  Q
    |||||| |||||||| |  ||||| |||||||       |||||||||||| ||||||||||||||||    
T  11462682 ctaaaatcacccctcgtcaatgaacgaaggagaaagaaagtttagagagaaattgaagtttctctcta 11462749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 46 - 210
Target Start/End: Complemental strand, 5983794 - 5983628
Alignment:
Q  46 cacaaaag-aaaaacttgatagatatgaaaatcacttatttagattgaaagagaa-ggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    |||||||| ||||||||||||||| |||||| || |||||||||| |||||| || |||||||||||||||||| | ||||||||| |||||| |||||     
T  5983794 cacaaaagcaaaaacttgatagatgtgaaaaccatttatttagatcgaaagaaaaaggggaaaaaagatgtagacgagtgattctaggtcaaaaaatgat 5983695  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
    ||||||||| ||||||| |||||| |||||||       ||||||||||||||| ||||||||||||    
T  5983694 ctaaaaccatccctcctcgatgaacgaaggagaaataaagtttagagagaagttaaagtttctctct 5983628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 15434977 - 15435171
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaa--------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatg 113  Q
    |||||||||||||||||||||| |||| |||        ||||||||||||  || |||||| |||||||||||||||||||| ||||| ||||||||||    
T  15434977 aacgccgcacttagacgacgaaatcactaaaaacaaaaggaaaaacttgatttatgtgaaaaacacttatttagattgaaagaaaaggg-aaaaaagatg 15435075  T
Q  114 tagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||| ||||||||  ||||| |||||||||||||| |||||||| ||||||||||| ||       |||| ||||||||||| ||||||||||    
T  15435076 tagagggttgattctagatcaaaaaatgacctaaaaccgcccctccttgatgaatgaagaagaaagaaggttttgagagaagttggagtttctctc 15435171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 34878377 - 34878570
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgt 114  Q
    |||||||||| ||||| |||||||||||||||||     ||||||||||||  | |||||| |||||||||| ||||||||| ||  |||||||||||||    
T  34878377 cacaacgccgtacttaaacgacgaagtcacaaaaaaacaaaaaacttgatatgtgtgaaaaccacttatttaaattgaaaga-aaatggaaaaaagatgt 34878475  T
Q  115 agaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||| | ||||||||| |||||| ||||||||||||||||||||||| |||||| ||| |||       ||||| |||||||||| ||||||||||    
T  34878476 agatgagtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaagagaaagaaagtttaaagagaagttggagtttctctc 34878570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 49626866 - 49626703
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||  |||||||  | |||||||||||||||||||| |||||| |||||||||||||||| |||||||||||| || ||||||||||||||    
T  49626866 cacaaaagaaaacgcttgatatttgtgaaaatcacttatttagatagaaaga-aaggggaaaaaagatgcagaggggtgattttaggtcaaagaatgacc 49626768  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||||||||| ||||| |||| |||         |||||||||||||| ||||||||||    
T  49626767 taaaaccacccctcctcgatgagtgaaagagaaggaacacttagagagaagttggagtttctctc 49626703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 209
Target Start/End: Complemental strand, 44915636 - 44915438
Alignment:
Q  15 acatcacaacgccgcacttagacgacgaagtcacaaaagaaaaa-cttgatagatatg--aaaatcacttatttagattgaaagagaaggggaaaaaaga 111  Q
    ||||||||||||| || |||||||| ||| ||||||||| |||| | | ||| |||||  |||| ||||||||||||| |||||| ||| ||||||||||    
T  44915636 acatcacaacgccacaattagacgatgaaatcacaaaaggaaaagccttatatatatgcgaaaaccacttatttagatggaaagataagaggaaaaaaga 44915537  T
Q  112 tgtagaggggtgattctaagtcaaagaatgacctaaaacc-acccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||| | ||||| |||| |||| |||||||||||||| ||||||||| |||||||||| |||       |||||||||||||||||| ||| ||||    
T  44915536 tgtagagtgatgattttaagccaaaaaatgacctaaaaccaacccctcctcgatgaatgaatgagaaagaaagtttagagagaagttgaaatttttctc 44915438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 32 - 209
Target Start/End: Original strand, 51916773 - 51916951
Alignment:
Q  32 ttagacgacgaagtcacaaaag-aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaa 130  Q
    |||||||| ||| ||||||||| |||||||||||  || |||||| |||||||||||||||||||| ||| | |||||||||||||| | |||||| ||     
T  51916773 ttagacgatgaaatcacaaaaggaaaaacttgatttatttgaaaaccacttatttagattgaaagaaaagagaaaaaaagatgtagatgagtgattttag 51916872  T
Q  131 gtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||| |||  ||||||||||||||||||  ||||| |||||||       ||||||||| || ||||||||||||||    
T  51916873 gtcaaaaaatagcctaaaaccacccctcctctatgaacgaaggagaaagaaagtttagagaaaaattgaagtttctctc 51916951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 35462136 - 35462283
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    |||||||||||||||| |||||||| ||||||||          |||||||||||||||| |||||| |||||||||| ||||||||| |||||||||||    
T  35462136 cacaacgccgcacttacacgacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttaaattgaaagaaaaggggaaaaa 35462235  T
Q  109 agatgtagaggggtgattctaagt-caaagaatgacctaaaaccaccc 155  Q
    |||||||||||| |||||||| ||  ||| ||||||||||||||||||    
T  35462236 agatgtagagggatgattctatgtaaaaaaaatgacctaaaaccaccc 35462283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 1742274 - 1742074
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa-----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaa 107  Q
    ||||||||||||||||||||||||| ||||||||            |||||||||||| || |||||| |||||||||||||||||||| ||||||  ||    
T  1742274 cacaacgccgcacttagacgacgaaatcacaaaaaaatacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaagaaaagggg-gaa 1742176  T
Q  108 aagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||  |||| |||||| ||| |||       ||||||| |||||||  ||||||||    
T  1742175 aagatggagaggggtgattctaggtcaaaaaatgacctaaaaccaccattccttgatgaacgaaagagaaaggaagtttagaaagaagtttgagtttctc 1742076  T
Q  208 tc 209  Q
    ||    
T  1742075 tc 1742074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 48750171 - 48750021
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    ||||||| |||||| ||||  |||| |||| |||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||| | ||    
T  48750171 cacaacgtcgcactaagacagcgaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aaggggaaaaaagatgca-ag 48750074  T
Q  119 gggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    | ||||||||| ||||||   |||||||| | |||||||||| ||||| ||||    
T  48750073 gagtgattctaggtcaaaatttgacctaatatcacccctcctcgatgagtgaa 48750021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 209
Target Start/End: Original strand, 10776620 - 10776759
Alignment:
Q  72 aaaatcacttatttagattgaaagagaaggggaaaa--aagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    |||| |||||||||||||||||||| ||  ||||||  |||||||||| ||||||||||| |||||| ||||| |||||||||||| |||| ||||||||    
T  10776620 aaaaccacttatttagattgaaagaaaataggaaaaaaaagatgtagatgggtgattctaggtcaaaaaatgatctaaaaccacccttcctcgatgaatg 10776719  T
Q  170 aaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||       |||||||||||| ||| ||||||||||    
T  10776720 aaggagaaagaaagtttagagagaaattggagtttctctc 10776759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 8212055 - 8212175
Alignment:
Q  55 aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    ||||||||||| || |||||| |||||||||||||| ||||| ||||  ||||||||||||||| ||||||| ||  ||||| ||| | |||||| ||||    
T  8212055 aaaacttgatatatgtgaaaaccacttatttagatttaaagaaaaggaaaaaaaagatgtagagaggtgattgtagatcaaaaaataatctaaaagcacc 8212154  T
Q  155 cctcctagatgaatgaaggag 175  Q
    |||||| ||||||||||||||    
T  8212155 cctccttgatgaatgaaggag 8212175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 172
Target Start/End: Complemental strand, 14872589 - 14872469
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa-gatgtagaggggtgattctaagtcaaagaatgacctaaaacc 151  Q
    |||||||||||||  | | |||| |||||||||| ||||||||| || ||||||||| |||||||||| |||||||||||||||| ||||||| ||||||    
T  14872589 gaaaaacttgatatttgtaaaaaccacttatttacattgaaagaaaaagggaaaaaaagatgtagaggagtgattctaagtcaaaaaatgaccgaaaacc 14872490  T
Q  152 acccctcctagatgaatgaag 172  Q
    || ||| || |||||||||||    
T  14872489 acaccttctcgatgaatgaag 14872469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 21947753 - 21947880
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaagggg-aaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||||| |||||| |||||| ||||||| || |||||||| || ||| ||| ||    
T  21947753 cacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaaatatgtagatggatgattctaggttaaa-aataac 21947851  T
Q  144 ctaaaaccacccctcctagatgaatgaag 172  Q
    |||||||||||| |||| |||||| ||||    
T  21947852 ctaaaaccacccatcctcgatgaacgaag 21947880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 23291778 - 23291881
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||| ||||||| || |||||| |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| |||||| |||||||    
T  23291778 cacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaagaaaagag-aaaaaagatgtcgaggggtgattctaggtcaaaaaatgacc 23291876  T
Q  145 taaaa 149  Q
    |||||    
T  23291877 taaaa 23291881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 36894388 - 36894498
Alignment:
Q  56 aaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccaccc 155  Q
    ||||||||||||| |||||  ||||||||||||| |||||| ||| ||||||||||||||||||||||| |||| |||||| |||||| || ||||||||    
T  36894388 aaacttgatagatgtgaaac-cacttatttagatcgaaagaaaagaggaaaaaagatgtagaggggtgactctaggtcaaaaaatgacttagaaccaccc 36894486  T
Q  156 ctcctagatgaa 167  Q
    ||| | ||||||    
T  36894487 ctcttcgatgaa 36894498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 45789516 - 45789395
Alignment:
Q  49 aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    |||| |||||||| ||| || |||||| |||||||||| ||||||||| ||||||||||| |||| ||||||||||||||| |||||| |||||||||||    
T  45789516 aaaaaaaaaacttaatacatgtgaaaaccacttatttaaattgaaaga-aaggggaaaaa-gatgcagaggggtgattctaggtcaaaaaatgacctaaa 45789419  T
Q  149 accacccctcctagatgaatgaag 172  Q
    |||| |  |||| |||||||||||    
T  45789418 accatcaatcctcgatgaatgaag 45789395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 16161787 - 16161669
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    |||||||||||||||||||  || || |||||||||||||||||||||| | |||| ||||||| ||| |||| |||||||||| |||||| | ||||||    
T  16161787 cacaaaagaaaaacttgatgtatgtggaaatcacttatttagattgaaata-aaggagaaaaaatatgaagagaggtgattctaggtcaaaaattgacct 16161689  T
Q  146 aaaaccacccctcctagatg 165  Q
    ||||  ||||||||| ||||    
T  16161688 aaaattacccctcctcgatg 16161669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 18939269 - 18939115
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||  | ||||||  ||||||||| ||||||||| ||||||||||| |||| |||| ||||||||||  ||||| |||||||||||||||    
T  18939269 gaaaaacttgatatgtgtgaaaactacttatttaaattgaaaga-aaggggaaaaa-gatgcagagaggtgattctagatcaaaaaatgacctaaaacca 18939172  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    || ||||| ||| ||||||||||         ||||||||||| |||||||||||||    
T  18939171 cctctcctcgattaatgaaggagaaagaaaacttagagagaaggtgaagtttctctc 18939115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 35484535 - 35484677
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||             || |||||| ||||||||| ||||||    
T  35484535 aaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagggaaaaaaagatgt-------------taggtcaaaaaatgacctacaaccac 35484621  T
Q  154 ccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||| |||||| |||||||       |||||||||||||||| ||||||||||    
T  35484622 ccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctc 35484677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 26535343 - 26535193
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||| ||| || |||||| |||||||||||||||||||| |||| | ||||||||||||| | ||||||||| ||||||     |||||||||||    
T  26535343 gaaaaacttaatatatgtgaaaaccacttatttagattgaaagaaaaggag-aaaaagatgtagatgtgtgattctaggtcaaa-----acctaaaacca 26535250  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    | | |||| |||||| |||||||       |||||||||||||||  ||||||||||    
T  26535249 ctcatccttgatgaacgaaggagagagaaagtttagagagaagttagagtttctctc 26535193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 34413251 - 34413338
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccct 157  Q
    ||||||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||  | ||| | |||||||||| |||||||    
T  34413251 tgaaaatcacttatttagattgaaagaaaggggaaaaaaagatgcagaggggtgattctagataaaaaattgacctaaaatcacccct 34413338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 13144955 - 13145036
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaa 135  Q
    |||||| |||||| ||||||||| |||||||||||||||||||| |||||| ||||| |||||||||| |||||||| |||||    
T  13144955 gaaaaagttgatatatatgaaaaccacttatttagattgaaaga-aaggggtaaaaatatgtagagggatgattctaggtcaa 13145036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 27456472 - 27456333
Alignment:
Q  71 gaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagt-caaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||||| |||||| || ||  ||| || ||  |||||||| ||||||| || |||||    
T  27456472 gaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaggagtgattttaggtaaaaaaaaagagttaaaaccatccctcctcgacgaatg 27456373  T
Q  170 aaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||       ||||||| |||||||||||||| ||||    
T  27456372 aaggagaaagaaagtttagaaagaagttgaagtttttctc 27456333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 940312 - 940200
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    |||||||||||| || |||||| |||||||||| ||| ||||| ||||||||| |||||| ||| ||||||||||| || ||| |||||| |||||||||    
T  940312 aaaaacttgatatatgtgaaaaccacttatttaaattaaaagaaaaggggaaacaagatgcagatgggtgattctaggt-aaaaaatgacttaaaaccac 940214  T
Q  154 ccctcctagatgaa 167  Q
     | |||| ||||||    
T  940213 tcatcctcgatgaa 940200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 3228166 - 3228097
Alignment:
Q  106 aaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggag 175  Q
    |||||||||||| |||||||| || || ||| ||||||||||||||||||||||| ||||||||||||||    
T  3228166 aaaagatgtagatgggtgattgtaggttaaaaaatgacctaaaaccacccctccttgatgaatgaaggag 3228097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 7836957 - 7837059
Alignment:
Q  101 gggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaa 200  Q
    |||||||||||||| ||||||||||||||  ||||| |||||||||||||||||| |||| |||||| ||| |||       |||||||||||||||| |    
T  7836957 gggaaaaaagatgtcgaggggtgattctagatcaaaaaatgacctaaaaccacccttcctcgatgaacgaaagagaaagaaggtttagagagaagttgga 7837056  T
Q  201 gtt 203  Q
    |||    
T  7837057 gtt 7837059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 12635123 - 12635016
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||| | | |  ||||||||||||| | |||||||||| || |||| | |||||||    
T  12635123 cacaaaagaaaacacttgatatatgtgaaaatcacttatttagattgaca-aaattgggaaaaaagatgcaaaggggtgattataggtcagaaaatgacc 12635025  T
Q  145 taaaaccac 153  Q
    |||||||||    
T  12635024 taaaaccac 12635016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 36775857 - 36775934
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattcta 129  Q
    |||||||||||||||  || ||||||||| ||||||||||||||  |||| ||||||||||||| |||||||||||||||    
T  36775857 aaagaaaaacttgatgtatgtgaaaatcatttatttagattgaa--agaaagggaaaaaagatgcagaggggtgattcta 36775934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 44543227 - 44543066
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| ||||||||  | |||||||||||||||||||| |||  |||| ||||||||||||| ||| || ||||| || |||||||||| |||    
T  44543227 cacaaaagaaaacacttgatatttgtgaaaatcacttatttagatcgaa--agaaagggaaaaaagatgcaga-ggctgattttaggtcaaagaataacc 44543131  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||| ||||| |||| ||||| |||| |||         |||||||||||||| ||||||||||    
T  44543130 taaaagcacccttcctcgatgagtgaaagagaaggaaaacttagagagaagttggagtttctctc 44543066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 9341680 - 9341571
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || |||||||  |||||||| ||||||||| ||| ||||||| |||| | |  ||||||||||||||||| |||||||    
T  9341680 cacaaaagaaaacacttgatatatgtgaaaatttcttatttatattgaaaga-aagaggaaaaa-gatgcatacaggtgattctaagtcaaaaaatgacc 9341583  T
Q  145 taaaaccacccc 156  Q
    ||||||||||||    
T  9341582 taaaaccacccc 9341571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 15836141 - 15836027
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||| |||||||  || |||||| |||||||||| ||||| ||| |||| ||||||  ||||| || |||||||||| |||||| |||||||||||||||    
T  15836141 gaaacacttgatgtatgtgaaaaccacttatttaaattgatagaaaaggagaaaaat-atgtatagcggtgattctaggtcaaaaaatgacctaaaacca 15836043  T
Q  153 cccctcctagatgaat 168  Q
    || ||||| |||||||    
T  15836042 cctctccttgatgaat 15836027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 34528645 - 34528568
Alignment:
Q  73 aaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||||||||||||||| |||||| |||||  ||||||||| ||||||||||||||| |||||| |||||| |||||||||    
T  34528645 aaatcacttatttagatcgaaaga-aaggg--aaaaagatgcagaggggtgattctaggtcaaaaaatgacataaaaccac 34528568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 568944 - 569082
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaa-tgacctaaaacca-cccctcctagatgaa 167  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| || ||| ||   || |||||||| ||||||||||||||     
T  568944 tgaaaatcacttatttagattgaaaga-aagggg-aaaaagatgtagaggggggattctaggtaaaaaaacatacttaaaaccaccccctcctagatgag 569041  T
Q  168 tgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||| |||        |||| |||||||||||||||||||||    
T  569042 tgaaagagaaagaaa-tttatagagaagttgaagtttctctc 569082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 50377257 - 50377177
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||| |||||||||| ||||||||| || ||||||||| ||| |||||| |||||||| |||||| |||||||||||||||    
T  50377257 tgaaaaccacttatttaaattgaaagaaaatgggaaaaaa-atg-agagggatgattctaggtcaaaaaatgacctaaaacca 50377177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 31918937 - 31918865
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgatt 126  Q
    |||||||||||| || |||||| |||||||||||||||| ||| ||| |||||||||||| ||| || |||||    
T  31918937 aaaaacttgatatatgtgaaaaccacttatttagattgatagaaaagaggaaaaaagatgcagatggatgatt 31918865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 41177046 - 41176977
Alignment:
Q  138 aatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||||||||||||||||| |||||| |||||||       |||||||||||||||| ||||||||    
T  41177046 aatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 41176977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 37720257 - 37720307
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaaga 96  Q
    |||||||||||||||||||  || || ||||||||||||||||||||||||    
T  37720257 cacaaaagaaaaacttgatgtatgtggaaatcacttatttagattgaaaga 37720307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 19060833 - 19060749
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccaccc 155  Q
    |||||||| |||||||| || |||||| ||||| |||||||||| ||| |||||||| ||  | ||||||| ||||||||||||||    
T  19060833 tgaaaatcgcttatttaaatcgaaaga-aagggaaaaaaagatgcagatgggtgattttagataaaagaataacctaaaaccaccc 19060749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 21686803 - 21686708
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaa 167  Q
    |||||| |||||||||| ||||||||| || || ||||||||||||||| | ||||||||  ||||| |||||||||||| || | ||||| ||||||    
T  21686803 tgaaaaccacttatttaaattgaaagaaaatgg-aaaaaagatgtagagag-tgattctagatcaaaaaatgacctaaaatcatctctcctcgatgaa 21686708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 33703497 - 33703562
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttattt 85  Q
    ||||||||| ||| |||||||||| |||| ||||||||||   |||||| ||||||||||||||||    
T  33703497 acaacgccgtactaagacgacgaaatcacgaaagaaaaacgaaatagatgtgaaaatcacttattt 33703562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 7836895 - 7836951
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaag-aaaaacttgatagatatgaaa 74  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||| || |||||    
T  7836895 cacaacgccgcacttagacgatgaaatcacaaaagaaaaaacttgatatatgtgaaa 7836951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 32679250 - 32679349
Alignment:
Q  60 ttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcc 159  Q
    |||||| || || |||||||||||||| ||||||||| |||   ||||  | || |||||| |||||||| |||||| |||||| |||||||||||||||    
T  32679250 ttgatatatgtggaaatcacttatttaaattgaaagaaaagat-aaaattggtgcagagggatgattctatgtcaaaaaatgacataaaaccacccctcc 32679348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 15492247 - 15492196
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaaga 96  Q
    ||||||||||||| ||||||| || ||||||||| |||||||||||||||||    
T  15492247 cacaaaagaaaaaacttgatatatgtgaaaatcatttatttagattgaaaga 15492196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 47132856 - 47132782
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggg 120  Q
    |||||||||||| |||||||| || |  |||||||||||||||||||||||| || |||||||| |||| ||||||    
T  47132856 cacaaaagaaaacacttgatatatgtagaaatcacttatttagattgaaaga-aaagggaaaaaggatgcagaggg 47132782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 13691752 - 13691881
Alignment:
Q  27 cgcacttagacgacgaagtcacaaaagaaaaacttgata-gatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgat 125  Q
    |||||| ||| |||||| |||||||||| |||| | ||  ||| ||||||||||||||||| || ||| | ||||| |||||| ||| ||||||||||||    
T  13691752 cgcactaagatgacgaaatcacaaaagagaaacctaattcgatgtgaaaatcacttatttaaatagaa-gtgaaggagaaaaacgatttagaggggtgat 13691850  T
Q  126 tctaagtcaaagaatgacctaaaaccacccc 156  Q
    | |  |||||| | |||||  ||||||||||    
T  13691851 tttgggtcaaaaattgaccctaaaccacccc 13691881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 27580270 - 27580354
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaagg--ggaaaaaagatgtagaggggtgattctaagtcaaa 136  Q
    ||||||||||||| || |||||| ||||||| ||||||||| || ||||    ||||||||||||||||| |||||||| ||||||    
T  27580270 gaaaaacttgatatatgtgaaaaccacttatatagattgaatga-aaggaaaaaaaaaagatgtagagggatgattctaggtcaaa 27580354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 31692625 - 31692724
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    ||||||||| ||| |||||| |||||| |  || |||||| ||| ||||||||||||| | |||||| |||||||||||| ||| | |||| ||||| ||    
T  31692625 tgaaaatcaattacttagatcgaaagaaa--ggaaaaaaaaatgcagaggggtgattcaaggtcaaaaaatgacctaaaatcacacatcctcgatgagtg 31692722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 34479439 - 34479328
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||||||||||  | |||||| |||||||||| ||| ||||| |  ||||||||||||| ||| |  ||||||||| | ||| |||||||||||| |      
T  34479439 aaaaacttgatatgtgtgaaaaccacttatttaaattaaaagaaa--gggaaaaaagatgcagacgaatgattctaaattaaaaaatgacctaaaatcgt 34479342  T
Q  154 ccctcctagatgaa 167  Q
    ||||||| ||||||    
T  34479341 ccctcctcgatgaa 34479328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 31317699 - 31317601
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagagg-ggtgattctaagtcaaagaatgacctaaaacc 151  Q
    |||||||||||||  | |||||| |||||||||| ||||||  |||| | | ||||||||| ||||| |||||||||| |||||  ||| ||||||||||    
T  31317699 gaaaaacttgatatgtgtgaaaaccacttatttaaattgaa--agaatgaggaaaaagatgcagaggaggtgattctatgtcaacaaattacctaaaacc 31317602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 33291541 - 33291627
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    ||||||||||||||||| ||||||| ||||   ||||||| ||| ||||||||||||  | |||||  | ||||| |||||||||||||    
T  33291541 tgaaaatcacttatttatattgaaatagaa--agaaaaaaaatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctc 33291627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 43412311 - 43412203
Alignment:
Q  60 ttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaac-cacccctc 158  Q
    |||||| | |||||||||||||||||| ||  ||||| ||| |||||||||||  | |||||||||| ||||||||| ||||||  | ||| ||||||||    
T  43412311 ttgatataaatgaaaatcacttatttaaatcaaaaga-aagaggaaaaaagatacataggggtgattttaagtcaaa-aatgac--acaactcacccctc 43412216  T
Q  159 ctagatgaatgaa 171  Q
    || ||||||||||    
T  43412215 ctcgatgaatgaa 43412203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 31013681 - 31013868
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagagggg 121  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||||| |||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  31013681 aacgccgcacttagacgacgaaatcacaaaaaaaaaactagatagatgtgaaaaccacttatttagattgaaagaaaagggggaaaaagatgtagagggg 31013780  T
Q  122 tgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||| |||||| ||||||||||||||||||||||| |||||| |||||||       |||||||||||||||| ||||||||||    
T  31013781 tgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctc 31013868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 37971272 - 37971087
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaagaaa-aacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggg 120  Q
    |||||||||||||||||||||| ||||||||| || |||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37971272 aacgccgcacttagacgacgaaatcacaaaaggaacaacttggtagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagaggg 37971173  T
Q  121 gtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||||| |||||| |||||||||||||||   ||||| ||||||||||| ||        ||||||||||||||| ||||||||||    
T  37971172 gtgattctaggtcaaaaaatgacctaaaacca---ctcctcgatgaatgaagaagaaagaaaatttagagagaagttggagtttctctc 37971087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 210
Target Start/End: Complemental strand, 23230600 - 23230435
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaag-agaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| |  |||||| | ||||    
T  23230600 cacaaaagaaaaaacttgatagatatgaaaaccacttatttagattgaaagaaaaaggggaaaaaagatgtagaggggtgatttttggtcaaaaattgac 23230501  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
    |||||| ||||| |||| |||||| |||||||       |||||||||||||||| |||||||||||    
T  23230500 ctaaaa-cacccatcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctct 23230435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 20559887 - 20560041
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||| || ||||| |||||||||    
T  20559887 gaaaaacttgatagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaa--atgtagaggggtgattctaggtccaaaaatgatctaaaacca 20559984  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||| | |||||| |||| ||       ||||||||||||||||  |||||||||    
T  20559985 cccctcatcgatgaacgaagaagaaaaaaagtttagagagaagttggtgtttctctc 20560041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 20571449 - 20571603
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||| || ||||| |||||||||    
T  20571449 gaaaaacttgatagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaa--atgtagaggggtgattctaggtccaaaaatgatctaaaacca 20571546  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||| | |||||| |||| ||       ||||||||||||||||  |||||||||    
T  20571547 cccctcatcgatgaacgaagaagaaaaaaagtttagagagaagttggtgtttctctc 20571603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 28897657 - 28897503
Alignment:
Q  55 aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    ||||||||||| | ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| ||  ||||| |||||| ||||||||||    
T  28897657 aaaacttgatatacatgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattttagatcaaaaaatgacttaaaaccacc 28897558  T
Q  155 cctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||| || |||||||| ||       ||||| | |||||||||||||||||||    
T  28897557 cctcctcgacgaatgaagaagaacgagagtttaaaaagaagttgaagtttctctc 28897503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 7883374 - 7883537
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaag-gggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||  ||||| |||||||    
T  7883374 cacaaaagaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagagggaaaaaagatgtagaggggtgattatagatcaaa-aatgacc 7883472  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||||| | || | |||||| ||| |||        |||||| |||||||||||||||||||    
T  7883473 taaaaccactcatcatcgatgaacgaatgagaaagaaaatttagaaagaagttgaagtttctctc 7883537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 77 - 207
Target Start/End: Complemental strand, 10377620 - 10377491
Alignment:
Q  77 cacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagn 176  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||| ||||| |||||| ||||||||||||||||||||||| |||||| |||||||     
T  10377620 cacttatttagattgaaagagaagggggaaaaagatgtagattggtg-ttctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaga 10377522  T
Q  177 nnnnnngtttagagagaagttgaagtttctc 207  Q
          |||||||||||||||| ||||||||    
T  10377521 aagaaagtttagagagaagttggagtttctc 10377491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 27110605 - 27110761
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||||| || |||| | |||||||||||||||||||| ||| | |||||||||||||| | |||||| ||  ||||| |||||||||||||||    
T  27110605 gaaaaacttgatatatgtgaagaccacttatttagattgaaagaaaagagtaaaaaagatgtagatgtgtgattttagatcaaaaaatgacctaaaacca 27110704  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||| || | ||||||||||||||       |||||||||||||||| ||||||||||    
T  27110705 cccatcttcgatgaatgaaggagaaagaaagtttagagagaagttggagtttctctc 27110761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 29938059 - 29937956
Alignment:
Q  56 aaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccaccc 155  Q
    |||||||||| ||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||    
T  29938059 aaacttgatatatatgaaaaccacttatttaggttgaaagaaaaggcgaaaaaagatgtagaggggtgattctaggtcaaa-aatgatctaaaaccaccc 29937961  T
Q  156 ctcct 160  Q
     ||||    
T  29937960 atcct 29937956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 18890840 - 18890950
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    |||||||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||| |||||| | ||||||    
T  18890840 cacaaaagaaaaacttgatgcatgtgaaaatcacttatttagattgaaaga-aaggggaaaaaagatgcagatgagtgattctaggtcaaaaattgacct 18890938  T
Q  146 aaaaccacccct 157  Q
    |||| |||||||    
T  18890939 aaaatcacccct 18890950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 53 - 172
Target Start/End: Original strand, 20553387 - 20553505
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| || ||||||||| |||| | |||||||||||| ||| || ||||| |||||||||    
T  20553387 gaaaaacttcatagatgtgaaaatcacttatttagattgaaaga-aaagggaaaaaaaatgttgtggggtgattctaggtccaaaaatgatctaaaacca 20553485  T
Q  153 cccctcctagatgaatgaag 172  Q
    |||||||| |||||| ||||    
T  20553486 cccctcctcgatgaacgaag 20553505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 40211438 - 40211569
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtc-aaagaatgac 143  Q
    |||||||||||| ||||||||||| |||||| | |||||||||||||||||| ||| | |||||||||||||||||||||||||| ||| ||| ||| ||    
T  40211438 cacaaaagaaaatacttgatagatgtgaaaaccgcttatttagattgaaagaaaagagtaaaaaagatgtagaggggtgattctaggtcaaaaaaattac 40211537  T
Q  144 ctaaaaccacccctcctagatgaatgaaggag 175  Q
    ||||| ||||||||||| ||| || |||||||    
T  40211538 ctaaagccacccctcctcgattaacgaaggag 40211569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 25191225 - 25191363
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||||| ||||||||||| |||||| |||||||||||| |||| ||||| ||||||      
T  25191225 tgaaaatcacttatttaatttgaaagaaaaggg-aaaaaagatgtagatgggtgattctaggtcaaaaaatgacctaaaatcacctctcctcgatgaaca 25191323  T
Q  170 aaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||       |||||||||||||||| ||||||||||    
T  25191324 aaggagaaagaaagtttagagagaagttggagtttctctc 25191363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 1239537 - 1239657
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| || |||||  | |||||||||||||||||||| ||| || |||||||||||||||| |||||||||||| || ||||||||| ||||    
T  1239537 cacaaaagaaaacacctgatatttgtgaaaatcacttatttagatcgaacga-aaggggaaaaaagatgcagaggggtgattttaggtcaaagaaggacc 1239635  T
Q  145 taaaaccacccctcctagatga 166  Q
    |||||||||||||||| |||||    
T  1239636 taaaaccacccctcctcgatga 1239657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 3673368 - 3673241
Alignment:
Q  77 cacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagn 176  Q
    |||||||||||||||||||| |||||| |||| ||||||||||| |||||||| |||||| ||||||||||||||| ||||| | ||||||| ||||||     
T  3673368 cacttatttagattgaaagaaaaggggcaaaa-gatgtagagggatgattctaggtcaaa-aatgacctaaaaccaaccctcttcgatgaataaaggaga 3673271  T
Q  177 nnnnnngtttagagagaagttgaagtttct 206  Q
          ||||||||||||||||||||||||    
T  3673270 aagaaagtttagagagaagttgaagtttct 3673241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 8981125 - 8981038
Alignment:
Q  73 aaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcct 160  Q
    |||||||||||||||||||||||| ||||||||||| |||| | |||||||||| || |||||| |||||||||||||||||||||||    
T  8981125 aaatcacttatttagattgaaagaaaaggggaaaaaggatgcataggggtgattttaggtcaaaaaatgacctaaaaccacccctcct 8981038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 14545001 - 14545198
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaa---------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaag 110  Q
    ||||||||||| |||||||||||| ||||||||         |||||  |||||| || |||||| |||||||||||||||||||| ||| | |||||||    
T  14545001 acaacgccgcaattagacgacgaaatcacaaaaatacaaaaggaaaattttgatatatgtgaaaaccacttatttagattgaaagaaaagagaaaaaaag 14545100  T
Q  111 atgtagag-gggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||| |||||||| || |||||| |||||||||||||||| | ||||  | |||||||||||        ||||||||||||||| ||||||||    
T  14545101 atgtagagagggtgattttaggtcaaaaaatgacctaaaaccactcatccttaacgaatgaaggagaaattttttttagagagaagttggagtttctc 14545198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 15344262 - 15344098
Alignment:
Q  45 tcacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    |||||||||||||  |||||||  | ||||||||||||||||||||  | | | |||||||||||||||| |||||||| ||| || |||||||||||||    
T  15344262 tcacaaaagaaaacgcttgatatttgtgaaaatcacttatttagatccatata-aaggggaaaaaagatgcagaggggtaattttaggtcaaagaatgac 15344164  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||||||||||||| ||||| |||| |||         |||||||||||||| ||||||||||    
T  15344163 ctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctc 15344098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 15433327 - 15433163
Alignment:
Q  45 tcacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    |||||||||||||  |||||||  | ||||||||||||||||||||  | | | |||||||||||||||| |||||||| ||| || |||||||||||||    
T  15433327 tcacaaaagaaaacgcttgatatttgtgaaaatcacttatttagatccatata-aaggggaaaaaagatgcagaggggtaattttaggtcaaagaatgac 15433229  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||||||||||||| ||||| |||| |||         |||||||||||||| ||||||||||    
T  15433228 ctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctc 15433163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 209
Target Start/End: Complemental strand, 15524631 - 15524467
Alignment:
Q  45 tcacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    |||||||||||||  |||||||  | ||||||||||||||||||||  | | | |||||||||||||||| |||||||| ||| || |||||||||||||    
T  15524631 tcacaaaagaaaacgcttgatatttgtgaaaatcacttatttagatccatata-aaggggaaaaaagatgcagaggggtaattttaggtcaaagaatgac 15524533  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||||||||||||| ||||| |||| |||         |||||||||||||| ||||||||||    
T  15524532 ctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagtttctctc 15524467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 209
Target Start/End: Original strand, 17693782 - 17693910
Alignment:
Q  80 ttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnn 179  Q
    ||||||||||||||||| |  | |||||||||||||||||| |||||||| |||||| ||||||||||||| |||||||||  ||||| |||||||        
T  17693782 ttatttagattgaaagaaattgagaaaaaagatgtagagggatgattctaggtcaaa-aatgacctaaaacaacccctcctcaatgaacgaaggagaaag 17693880  T
Q  180 nnngtttagagagaagttgaagtttctctc 209  Q
       |||||||||||||||| ||||||||||    
T  17693881 aaagtttagagagaagttggagtttctctc 17693910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 33214767 - 33214928
Alignment:
Q  47 acaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtc-aaagaatgacct 145  Q
    |||||| |||||||| ||| ||  |||||||||||||||| ||||||||| |||||  ||||||||||||| |  |||||||||||| ||| || |||||    
T  33214767 acaaaaaaaaaacttaatatatgcgaaaatcacttatttaaattgaaagaaaaggg--aaaaagatgtagatgaatgattctaagtcaaaaaaaagacct 33214864  T
Q  146 aaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||| |||| |||||| |||||||       |||||||||||| ||||||||| ||||    
T  33214865 aaaaccacccatcctcgatgaacgaaggagaaagaaagtttagagagaaattgaagtttgtctc 33214928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 45445954 - 45446108
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||||||||||  | |||||| |||||| ||| ||||||| | ||||| ||||||||||||||| | |||||||| |||||| |||||| |||||| ||    
T  45445954 aaaaacttgatatgtgtgaaaaccacttaattaaattgaaataaaaggg-aaaaaagatgtagagagatgattctatgtcaaaaaatgacataaaactac 45446052  T
Q  154 ccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    || |||| |||||| |||||||       |||||||||||||||| ||||||||||    
T  45446053 ccttcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctc 45446108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 14585650 - 14585565
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaa 135  Q
    |||||||||||||||  || ||||||||||||||||||||||||||| ||| | |||||||||| ||||||||||||||| |||||    
T  14585650 aaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaagaaaagagaaaaaaagatgcagaggggtgattctaggtcaa 14585565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 40619210 - 40619307
Alignment:
Q  49 aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    ||||||||||||||||| || ||||||||||||||||||||||| ||| || | ||||||| |||||||||| |||||||| |||||| |||||||||||    
T  40619210 aaaagaaaaacttgatatatgtgaaaatcacttatttagattgataga-aaagagaaaaaatatgtagagggatgattctaggtcaaa-aatgacctaaa 40619307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 8443655 - 8443779
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaa--aagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    |||||||||||| || |||| || || ||||||||||||||||| |||||| ||||||||||  |||||| ||| || ||||||||||| ||| ||||||    
T  8443655 cacaaaagaaaacctggatatatgtggaaatcacttatttagatcgaaaga-aaggggaaaagaaagatgcagatgg-tgattctaagttaaaaaatgac 8443752  T
Q  144 ctaaaaccacccctcctagatgaatgaa 171  Q
    |||||||||||||| || ||||||||||    
T  8443753 ctaaaaccacccct-cttgatgaatgaa 8443779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 7677415 - 7677528
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    |||||||  ||||||||||| || ||||||  | |||||||||| |||||| || | | ||  ||||||||||||||||||||| |||||| ||||||||    
T  7677415 cacaaaaacaaaacttgatatatgtgaaaacaatttatttagatcgaaagaaaaagtg-aatgagatgtagaggggtgattctaggtcaaaaaatgacct 7677513  T
Q  146 aaaaccacccctcct 160  Q
    |||||||||||||||    
T  7677514 aaaaccacccctcct 7677528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 24186792 - 24186864
Alignment:
Q  46 cacaaaag-aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtaga 117  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| ||||| |||  |||||||||||||||    
T  24186792 cacaaaagcaaaaacttgatatatatgaaaatcacttatttagatttaaagaaaagatgaaaaaagatgtaga 24186864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 41896461 - 41896344
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| |  |||||||||  || | | ||||||||||| |||||| | ||||||||||    
T  41896461 aaagaaaaacttgatggatgtgaaaatcacttatttagattgaaagaaa--gggaaaaaa--tgcaaatgggtgattctaggtcaaaaattgacctaaaa 41896366  T
Q  150 ccacccctcctagatgaatgaa 171  Q
     ||| | |||| ||||| ||||    
T  41896365 tcactcatcctcgatgagtgaa 41896344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 1236879 - 1236941
Alignment:
Q  98 aaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcct 160  Q
    |||||||||||||||| |||||| | ||| || ||||||||||||||||||||||||||||||    
T  1236879 aaggggaaaaaagatgcagagggattattttaggtcaaagaatgacctaaaaccacccctcct 1236941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 8826156 - 8826038
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagagggg-tgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||||  | | |||||||||||||||||| |||| | | |||||||||||||  | ||||| ||||||||  ||||| |||||||||||||||    
T  8826156 aaaaacttgatatgtgtaaaaatcacttatttagatcgaaataaagggggaaaaaagatacaaagggggtgattctagatcaaaaaatgacctaaaacca 8826057  T
Q  153 cccctcctagatgaatgaa 171  Q
    ||| |||| ||||| ||||    
T  8826056 cccatcctcgatgagtgaa 8826038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 3240332 - 3240216
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattcta-agtcaaagaatgac 143  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||||  || |  |||||||||| ||| ||||||||||| |   ||| ||||||    
T  3240332 cacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaaggaaatgaaaaaaaagatgcagatgggtgattctagataaaaaaaatgac 3240233  T
Q  144 ctaaaaccacccctcct 160  Q
    |||||| ||||||||||    
T  3240232 ctaaaatcacccctcct 3240216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 44091889 - 44092008
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtc-aaagaatgacctaaaacc 151  Q
    |||||||||||||||| |||||| |||| |||||||| ||||||||    ||||||||||||||| ||||||||||| ||| ||| ||||||| ||||||    
T  44091889 gaaaaacttgatagatgtgaaaaccactaatttagatcgaaagaga--tagaaaaaagatgtaga-gggtgattctaggtcaaaaaaatgacccaaaacc 44091985  T
Q  152 acccctcctagatgaatgaagga 174  Q
    || | |  | |||||||||||||    
T  44091986 acgcatttttgatgaatgaagga 44092008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 149
Target Start/End: Original strand, 26469339 - 26469430
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||||   ||||| ||  ||| || |||||||| |||||| ||||||||||||    
T  26469339 aaaaacttgatatatgtgaaaatcacttatttagattgaaa-agaagg---aaaaaaattcagatggatgattctaggtcaaaaaatgacctaaaa 26469430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 14916332 - 14916395
Alignment:
Q  107 aaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    ||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||| || |||||||    
T  14916332 aaagatgcagatgggtgattctaggtcaaa-aatgacctaaaaccacccctcctcgaagaatgaa 14916395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 24099399 - 24099504
Alignment:
Q  49 aaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaa 147  Q
    ||||||||| |||||||  || || |||||||||||||| || |||||| ||| ||||| || ||| ||||||||||||||| |||||| ||||||||||    
T  24099399 aaaagaaaacacttgatctatgtggaaatcacttatttaaatcgaaaga-aagaggaaacaaaatgcagaggggtgattctaggtcaaa-aatgacctaa 24099496  T
Q  148 aaccaccc 155  Q
    | ||||||    
T  24099497 agccaccc 24099504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 154
Target Start/End: Complemental strand, 5046701 - 5046597
Alignment:
Q  49 aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagt-caaagaatgacctaa 147  Q
    ||||| |||||||||||  | ||||||||||||||||| ||| ||||| |||||| ||||||||| | ||||| ||||||| ||  ||| ||||||||||    
T  5046701 aaaagtaaaacttgatatgtgtgaaaatcacttatttaaattaaaaga-aagggg-aaaaagatgcataggggcgattctaggtaaaaaaaatgacctaa 5046604  T
Q  148 aaccacc 154  Q
    |||||||    
T  5046603 aaccacc 5046597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 209
Target Start/End: Original strand, 8412510 - 8412646
Alignment:
Q  77 cacttatttagattgaaagagaaggggaaaaaa---gatgtagaggggtgattctaagtcaaagaa-tgacctaaaaccacccctcctagatgaatgaag 172  Q
    |||||||||||||||||||| |||  |||||||   || ||  ||||||||||||| || ||| || |||||||||||||||||| || |||||| |||     
T  8412510 cacttatttagattgaaagaaaagaagaaaaaaaaagacgtcaaggggtgattctaggtaaaaaaaatgacctaaaaccacccctactcgatgaacgaat 8412609  T
Q  173 gagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||       |||||||||||||||  ||||||||||    
T  8412610 gagaaagaaagtttagagagaagttagagtttctctc 8412646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 1215326 - 1215432
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaagaaaaacttgata-gatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    |||||| | |||| |||||||||| ||||||||| ||||| | ||  ||| ||||||||||||||||| | | |||||||||| |||||| ||| |||||    
T  1215326 acaacgtcacactaagacgacgaaatcacaaaaggaaaacctaattcgatgtgaaaatcacttattta-aataaaagagaaggagaaaaatgatttagag 1215424  T
Q  119 gggtgatt 126  Q
     |||||||    
T  1215425 cggtgatt 1215432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 8867755 - 8867681
Alignment:
Q  74 aatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    ||||||||||||||||||||||| ||||| || |||||||| || || ||||||||  ||||| |||||| |||||    
T  8867755 aatcacttatttagattgaaaga-aagggaaacaaagatgttgatggctgattctagatcaaaaaatgacttaaaa 8867681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 14530903 - 14531033
Alignment:
Q  28 gcacttagacgacgaagtcacaaaagaaaaacttgata-gatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgatt 126  Q
    ||||| |||||| ||| ||||||||| ||||| | ||  ||| ||||||||||||||||| || ||| ||||||| |||||| ||| |||| ||||||||    
T  14530903 gcactaagacgatgaattcacaaaaggaaaacctaattcgatgtgaaaatcacttatttaaatagaa-gagaaggagaaaaacgatttagaagggtgatt 14531001  T
Q  127 ctaagtcaaagaatgacctaaaaccacccctc 158  Q
       ||||||| | |||||  ||||||||||||    
T  14531002 tggagtcaaaaattgaccctaaaccacccctc 14531033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 32920771 - 32920673
Alignment:
Q  28 gcacttagacgacgaagtcacaaaagaaaaacttga-tagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgatt 126  Q
    ||||| |||||||||| ||||||||||||||| | | | ||| ||||||||||||||||| ||  |||| ||||| |||||| ||| ||||| |||||||    
T  32920771 gcactaagacgacgaaatcacaaaagaaaaacctaattcgatgtgaaaatcacttatttaaataaaaag-gaaggagaaaaacgatttagagcggtgatt 32920673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 36948579 - 36948622
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaaga 96  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||    
T  36948579 gaaaaatttgatatatatgaaaaccacttatttagattgaaaga 36948622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 21237771 - 21237702
Alignment:
Q  28 gcacttagacgacgaagt--cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaa 94  Q
    |||||||||||||||| |  |||||| ||||| |||||||| || || ||||||||||||||||||||||    
T  21237771 gcacttagacgacgaaataacacaaaggaaaacacttgatatatttggaaatcacttatttagattgaaa 21237702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 8237320 - 8237368
Alignment:
Q  47 acaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaag 95  Q
    |||||||||||| |||||  ||||||||||||||| || ||||||||||    
T  8237320 acaaaagaaaaatttgatctatatgaaaatcacttcttcagattgaaag 8237368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 18190838 - 18190898
Alignment:
Q  27 cgcacttagacgacgaagtcacaaaagaaaaacttgata-gatatgaaaatcacttattta 86  Q
    |||||| |||||||||| ||||||||| ||||||| ||  ||| |||||||||||||||||    
T  18190838 cgcactaagacgacgaaatcacaaaaggaaaacttaattcgatgtgaaaatcacttattta 18190898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 10233059 - 10232862
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa---------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa 109  Q
    ||||||||||||||||||||||||| ||||||||         |||||||||||||||  |||||| |||||||||||||||||||| ||||||||||||    
T  10233059 cacaacgccgcacttagacgacgaaatcacaaaaacacaaaaggaaaaacttgatagacgtgaaaaccacttatttagattgaaagaaaaggggaaaaaa 10232960  T
Q  110 gatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||       |||||||||||||||| ||||||||    
T  10232959 gatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctccttgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 10232862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 9998456 - 9998258
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa---------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa 109  Q
    ||||||||||||||||||||||||| ||||||||         |||||||||||||||  |||||| |||||||||||||||||||| ||||||||||||    
T  9998456 cacaacgccgcacttagacgacgaaatcacaaaaacacaaaatgaaaaacttgatagacgtgaaaaccacttatttagattgaaagaaaaggggaaaaaa 9998357  T
Q  110 gatgtagaggggtgattctaagtc-aaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||||||| |||||| |||||||       |||||||||||||||| ||||||||    
T  9998356 gatgtagaggggtgattctaggtcaaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 9998258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 10108225 - 10108030
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa---------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa 109  Q
    ||||||||||||||||||||||||| ||||||||         |||||||||||||||  |||||| |||||||||||||||||||| ||||||||||||    
T  10108225 cacaacgccgcacttagacgacgaaatcacaaaaacacaaaaggaaaaacttgatagacgtgaaaaccacttatttagattgaaagaaaaggggaaaaaa 10108126  T
Q  110 gatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||||  ||||||       |||||||||||||||| ||||||||    
T  10108125 gatgtagaggggtgattctaggtcaa--aatgacctaaaaccacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctc 10108030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 49 - 207
Target Start/End: Complemental strand, 21431574 - 21431417
Alignment:
Q  49 aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||||||||||| || |||||| |||||||||||    
T  21431574 aaaagaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaatgggaaaaaagatgtagaggggtgattttaggtcaaa-aatgacctaaa 21431476  T
Q  149 accacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||||||| |||||| |||||||       |||||||||||||||| ||||||||    
T  21431475 accacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 21431417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 6954796 - 6954992
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa 109  Q
    |||||||||||||||||||||||| ||||||||          |||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||    
T  6954796 acaacgccgcacttagacgacgaaatcacaaaaaacacaaaatgaaaaacttgatagatgtgaaacccacttatttagattgaaagaaaaggggaaaaaa 6954895  T
Q  110 gatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttct 206  Q
    |||||||||||||||||||| |||||| |||||||||||| ||||||||||   |||| |||||||       |||||||||||||||| |||||||    
T  6954896 gatgtagaggggtgattctaggtcaaaaaatgacctaaaatcacccctcctcagtgaacgaaggagaaagaaagtttagagagaagttggagtttct 6954992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 36461530 - 36461728
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaaga----------aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| |||||||| |          |||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  36461530 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagaaaaaacttgatagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaa 36461629  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||||||||||| | || |||||| |||||||||||||||| | |||| |||||| |||||||       ||||||||||||  |||||||||||    
T  36461630 agatgtagaggggtgaatataggtcaaaaaatgacctaaaaccactcatcctcgatgaacgaaggagaaagaaagtttagagagaatatgaagtttctc 36461728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 45568544 - 45568743
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaag---------aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa 109  Q
    ||||||||||||||||||||||||| ||||||||          ||||||||||||||| ||||||  ||||||||||||||||||| ||||||||||||    
T  45568544 cacaacgccgcacttagacgacgaaatcacaaaaacagaaaagaaaaaacttgatagatgtgaaaacaacttatttagattgaaagaaaaggggaaaaaa 45568643  T
Q  110 gatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||| || | ||||||  ||||| ||||||||||||||||||||||| |||||| |||||||       |||||||||||||||| ||||||||||    
T  45568644 gatgtagatggattattctagatcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctc 45568743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 47896105 - 47895941
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||| ||||||| || |||||| |||||||||||||||||||| || | ||||||||||||||||||||||||||| |||||| ||||| |    
T  47896105 cacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaagaaaaagagaaaaaagatgtagaggggtgattctaggtcaaaaaatgatc 47896006  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    || ||||||||||||| |||||| |||||||       |||||||||||||||| ||||||||||    
T  47896005 tataaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctc 47895941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 40487314 - 40487115
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||          ||||||||||| |||  |||||| |||||||||||||||||||| |||||||||||    
T  40487314 cacaacgccgcacttagacgacgaaatcacaaaaaatacaaaaagaaaaacttgaaagaagtgaaaaccacttatttagattgaaagaaaaggggaaaaa 40487215  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctct 208  Q
     |||||||| | ||||||||| |||||| |||||||||||| |||||||||| |||||| |||||||       |||||||||||||||| |||||||||    
T  40487214 -gatgtagaagagtgattctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctct 40487116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 10229465 - 10229266
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa---------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa 109  Q
    |||||||||||||||||| |||||| ||||||||         |||||||||||||||  |||||| |||||||||||||||||||| ||||||||||||    
T  10229465 cacaacgccgcacttagaagacgaaatcacaaaaacacaaaaggaaaaacttgatagacgtgaaaaccacttatttagattgaaagaaaaggggaaaaaa 10229366  T
Q  110 gatgtagaggggtgattctaagtc--aaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||| |||||||||| |||  ||| || |||||||||||||||||||| |||||| |||||||       |||||||||||| ||| ||||||||    
T  10229365 gatgtagagtggtgattctaggtccaaaaaaaagacctaaaaccacccctcctcgatgaaagaaggagaaagaaagtttagagagaaattggagtttctc 10229266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 35865070 - 35865232
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    |||||||||||||||||||| || ||||||  ||||||||||||||||||| ||| |||||||||||||||| || ||||| ||  ||||| ||||||||    
T  35865070 cacaaaagaaaaacttgatatatgtgaaaactacttatttagattgaaagaaaagaggaaaaaagatgtagaaggatgattttagatcaaa-aatgacct 35865168  T
Q  146 aaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||||||||||| || ||| |||||||       |||||||||||||||||||||||||||    
T  35865169 aaaaccacccctcctcgaggaacgaaggagaaagaaagtttagagagaagttgaagtttctctc 35865232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 54148933 - 54148827
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||||||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| || |||||| ||||||||||||||||    
T  54148933 aaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattgtaggtcaaaaaatgacctaaaaccac 54148834  T
Q  154 ccctcct 160  Q
    |||||||    
T  54148833 ccctcct 54148827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 33579821 - 33579658
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||| || |||| || ||||||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||| ||||||     
T  33579821 cacaaaagaaaaaactagatatatgtgaaaatcacttatttagattgaaagaaaatgg-aaaaaagatgtagaggggtgattctaggtcaaaaaatgact 33579723  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||||||| || | |||||| ||||||        |||||||||||||||||||||||||||    
T  33579722 taaaaccacccttcttcgatgaacgaaggataaagaaagtttagagagaagttgaagtttctctc 33579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 55 - 207
Target Start/End: Complemental strand, 40556655 - 40556503
Alignment:
Q  55 aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    ||||||||||||||||||||| |||||||||| ||  ||||| ||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||||    
T  40556655 aaaacttgatagatatgaaaaccacttatttatatcaaaagaaaagggaaaaaaagatgtggaggggtgattctaggtcaaaaaatgacctaaaaccacc 40556556  T
Q  155 cctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||| |||||| ||| |||       ||||||| |||||||| ||||||||    
T  40556555 cctcctcgatgaacgaatgagaaagaaagtttagaaagaagttggagtttctc 40556503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 54 - 206
Target Start/End: Original strand, 47042196 - 47042348
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    |||||| ||||| || ||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| || || ||| ||||||||||||||||    
T  47042196 aaaaacatgatatatgtgaaaatcacttatttaaattgaaagaaaagggaaaaaaagatgtagaggggtgattataggttaaaaaatgacctaaaaccac 47042295  T
Q  154 ccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttct 206  Q
    ||||||| |||||| ||||||        |||||||||||||||| |||||||    
T  47042296 ccctcctcgatgaacgaaggataaataaagtttagagagaagttggagtttct 47042348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 53 - 206
Target Start/End: Original strand, 48650877 - 48651031
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaa-aagatgtagaggggtgattctaagtcaaagaatgacctaaaacc 151  Q
    |||||||||||||||| |||||| |||||||  ||||||||||| |||||||||| ||||||| ||||||||||| || |||||| ||||||||||||||    
T  48650877 gaaaaacttgatagatgtgaaaaccacttatacagattgaaagaaaaggggaaaaaaagatgtcgaggggtgattttaggtcaaaaaatgacctaaaacc 48650976  T
Q  152 acccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttct 206  Q
    ||||||||| |||||| || ||||       |||||||||||||||| |||||||    
T  48650977 acccctcctcgatgaacgatggagaaagaaagtttagagagaagttggagtttct 48651031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 53 - 206
Target Start/End: Original strand, 52923260 - 52923411
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||| |||||| |    
T  52923260 gaaaaacttgatagatgtgaaaaccacttatttagattgaaaga-aaagggaaaaaagatgtagaggggtgattctaggtcaaa-aatgacttaaaacta 52923357  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttct 206  Q
    || |||||  ||||| |||||||       |||||||||||||||| |||||||    
T  52923358 cctctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttct 52923411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 43488734 - 43488896
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||||||||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| || |||||||| ||||    
T  43488734 aaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaagggaaaaaagatgtagaggggtgattctaggtcaaa-aaagacctaaacccac 43488832  T
Q  154 ccctcct--------agatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||| |||         ||||||||||||||       |||||||||||||||||||||||||||    
T  43488833 cccccctcccccccccgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 43488896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 56 - 209
Target Start/End: Original strand, 9797675 - 9797826
Alignment:
Q  56 aaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaa-aagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||| | |||| |||||||||||||||||||||| |||||| |||||||||||||||||    
T  9797675 aaacttgatagatgtgaaaaccacttatttagattgaaagaaaagagaaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacc 9797774  T
Q  155 cctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
     |||    ||||| |||||||       |||||||||||||||| ||||||||||    
T  9797775 tctc---aatgaacgaaggagaaataaagtttagagagaagttggagtttctctc 9797826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 7449047 - 7449152
Alignment:
Q  55 aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    ||||||||||||||  ||||| |||||||||||||||||||| ||| |||||||||||||||||||  ||||||| |||||| ||||||||||||||| |    
T  7449047 aaaacttgatagatgcgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagagggacgattctatgtcaaaaaatgacctaaaaccagc 7449146  T
Q  155 cctcct 160  Q
    ||||||    
T  7449147 cctcct 7449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 7457189 - 7457294
Alignment:
Q  55 aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    ||||||||||||||  ||||| |||||||||||||||||||| ||| |||||||||||||||||||  ||||||| |||||| ||||||||||||||| |    
T  7457189 aaaacttgatagatgcgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagagggacgattctatgtcaaaaaatgacctaaaaccagc 7457288  T
Q  155 cctcct 160  Q
    ||||||    
T  7457289 cctcct 7457294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 12050782 - 12050948
Alignment:
Q  46 cacaaaaga-aaaacttgatagatatgaaaatcacttatttagattgaaagagaa-ggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||| |||||||||||||| |||||| ||||||| |||||| ||||| || ||||||| ||||||||||||||||||||||| ||||| ||| ||    
T  12050782 cacaaaagataaaacttgatagatgtgaaaaccacttatctagatttaaagaaaaaggggaaagaagatgtagaggggtgattctaaatcaaaaaataac 12050881  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
     ||||||||| | |||| |||||| |||||||        ||||||||||||||| |||||||||||    
T  12050882 ttaaaaccacacatccttgatgaacgaaggagaaagaaaatttagagagaagttggagtttctctct 12050948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 77 - 206
Target Start/End: Complemental strand, 32701420 - 32701291
Alignment:
Q  77 cacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagn 176  Q
    |||||||||||||||||||| |||| ||| |||||||||||||| |||||||| |||||| ||||||||||||||||||| ||| |||||| |||||||     
T  32701420 cacttatttagattgaaagaaaaggagaagaaagatgtagagggatgattctaggtcaaaaaatgacctaaaaccaccccacctcgatgaacgaaggaga 32701321  T
Q  177 nnnnnngtttagagagaagttgaagtttct 206  Q
          ||||| |||||||||| |||||||    
T  32701320 aagaaagtttaaagagaagttggagtttct 32701291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 21533953 - 21534107
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaag-gggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||||||| |||||| ||||||||||||||| |||| ||| || |||||||||||||||||||||||||| |||||  || ||||||||||||    
T  21533953 aaaaacttgatagatgtgaaaaccacttatttagattggaagaaaagaggaaaaaaagatgtagaggggtgattctaggtcaa--aaagacctaaaacca 21534050  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||| |||| ||| || |||||||       |||||||||||| ||  ||||||||||    
T  21534051 cccatcctcgattaacgaaggagaaagaaagtttagagagaaattagagtttctctc 21534107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 36910784 - 36910860
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattcta 129  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  36910784 gaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggagtgattcta 36910860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 166
Target Start/End: Original strand, 51303749 - 51303894
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    ||||||| |||||| | |||||||| |||| |||||||||||||||  || |||||||||||||||| |||||||| | |||||||||||||||| |||     
T  51303749 cacaacgtcgcactaaaacgacgaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttggattgaaa-aaaaggggaaaaaagatgcaga- 51303846  T
Q  119 gggtgattctaagtcaaagaatgacctaaaaccacccctcctagatga 166  Q
    ||||||||||| |||||| | |||| ||||| || ||||||| |||||    
T  51303847 gggtgattctaggtcaaaaattgacataaaatcatccctcctcgatga 51303894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 629003 - 629167
Alignment:
Q  10 gatggacatcacaacgccgcacttagacgacgaagtcacaaaagaaaaa---cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaa 106  Q
    |||| ||| ||||| | ||||||||||||||||| |||||||  |||||   |||||||  | |||||||||||||||||||| ||||||   ||  |||    
T  629003 gatgaacaacacaaggtcgcacttagacgacgaaatcacaaacaaaaaaacgcttgatatttgtgaaaatcacttatttagatcgaaagaaggggaaaaa 629102  T
Q  107 aaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    ||||||| ||| || ||||| || |||||||||||||||||||||||||||||| ||||| ||||    
T  629103 aaagatgcagaaggatgattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaa 629167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 20608998 - 20609162
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaag-aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggg-------gaaaaaag 110  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||||| || | |||| |||||||||||||||||||| ||| |        |||||||    
T  20608998 cacaacgccgcaattagacgacgaaatcacaaaaggaaaaacttgatatatgttaaaaccacttatttagattgaaagaaaagagaaaaaaaaaaaaaag 20609097  T
Q  111 atgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggag 175  Q
    |||||||||| ||||| || |||||| ||| || ||||| |||||||||| || |||||||||||    
T  20609098 atgtagagggttgattttaggtcaaaaaataacttaaaatcacccctcctcgacgaatgaaggag 20609162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 21289961 - 21290069
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||  || | |||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||| |||||| | ||||||||||    
T  21289961 aaagaaaaacttgatgtatgttaaaatcacttatttggattgaaaga--aggggaaaaaagatgcagaggggtgattctaggtcaaaaattgacctaaaa 21290058  T
Q  150 ccacccctcct 160  Q
     |||| |||||    
T  21290059 tcacctctcct 21290069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 29922006 - 29921880
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||||| |||||||||||||||| ||||  |||||| ||  ||||| |||||||    
T  29922006 cacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaaga-aaggggaaaaaagatggagagaagtgattttagctcaaaaaatgacc 29921908  T
Q  145 t-aaaaccacccctcctagatgaatgaa 171  Q
    | ||||||||||||||| || |||||||    
T  29921907 taaaaaccacccctcctcgacgaatgaa 29921880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 29971159 - 29971033
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||||| |||||||||||||||| ||||  |||||| ||  ||||| |||||||    
T  29971159 cacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaaga-aaggggaaaaaagatggagagaagtgattttagctcaaaaaatgacc 29971061  T
Q  145 t-aaaaccacccctcctagatgaatgaa 171  Q
    | ||||||||||||||| || |||||||    
T  29971060 taaaaaccacccctcctcgacgaatgaa 29971033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 51923709 - 51923611
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    ||||||| | |||| |||||||||| |||| |||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  51923709 cacaacgtcacactaagacgacgaaatcacgaaagaaaaacttgatgcatgtgaaaatcacttatttagattgaaaga-aaggggaaaaaagatgcagag 51923611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 20465113 - 20465232
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||||| || | ||||||||||||||| ||||||| | |||||| ||||||| | ||||||||||||||| |||||| |||||| ||||||||    
T  20465113 gaaaaacttgatatatgttaaaatcacttatttatattgaaa-aaaagggg-aaaaagagggagaggggtgattctatgtcaaa-aatgacataaaacca 20465209  T
Q  153 cccctcctagatgaatgaaggag 175  Q
    ||||| || ||||||||||||||    
T  20465210 cccctacttgatgaatgaaggag 20465232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 50194419 - 50194526
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || || ||||||||||||||||||||||||||| |||||||| |||| |||| ||||||| || |||||| ||||| |    
T  50194419 cacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaagagaa-gggaaaaaggatgcagagaggtgattttaggtcaaaaaatgatc 50194517  T
Q  145 taaaaccac 153  Q
    |||||||||    
T  50194518 taaaaccac 50194526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 23800055 - 23800176
Alignment:
Q  56 aaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca--c 153  Q
    |||||||||| || | |||| |||||||||||||||||||| ||| |||||||||||||||| | || ||| || |||||| ||| |||||||||||  |    
T  23800055 aaacttgatatatgtaaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaagagtaattttaggtcaaaaaataacctaaaaccaccc 23800154  T
Q  154 ccctcctagatgaatgaaggag 175  Q
    ||||| | ||||||||||||||    
T  23800155 ccctcttcgatgaatgaaggag 23800176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 37040700 - 37040634
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaa 136  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  37040700 tgaaaaccacttatttagattgaaagaaaatgggaaaaaagatgtagaggggtgattctaggtcaaa 37040634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 42460695 - 42460585
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||  || || |||||||||||||||||||||||| |||||||||||||||| |||  | ||||| || |||||| | ||||||||||    
T  42460695 aaagaaaaacttgatgtatgtggaaatcacttatttagattgaaagaaaaggggaaaaaagatgcagattgatgattttaggtcaaaaactgacctaaaa 42460596  T
Q  150 ccacccctcct 160  Q
     || |||||||    
T  42460595 tcatccctcct 42460585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 26275907 - 26276058
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagagg 119  Q
    ||||||||||||||| |||||||| ||||||||| |||| |   | ||| |||||| |||||||||| ||||||||| || ||| ||||| |||| ||||    
T  26275907 acaacgccgcacttaaacgacgaaatcacaaaaggaaaaat---ttgatgtgaaaaccacttatttaaattgaaagaaaatgggtaaaaa-atgtcgagg 26276002  T
Q  120 ggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggag 175  Q
    | ||||| || |||||| ||| ||||||||||||| |||||  |||||| ||||||    
T  26276003 gttgattttaggtcaaaaaattacctaaaaccacctctcctcaatgaataaaggag 26276058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 53 - 173
Target Start/End: Complemental strand, 9320002 - 9319884
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| |||||| ||||||||| |||||||| | | ||| |||||||||||||| |||||||| || |||||| ||| | |||||||||    
T  9320002 gaaaaacttgatagatgtgaaaaccacttattttgattgaaaaaaaggggaaaaaaagatgtaga-gggtgattatatgtcaaa-aataatctaaaacca 9319905  T
Q  153 cccctcctagatgaatgaagg 173  Q
    | |||||| |||||| |||||    
T  9319904 ctcctcctcgatgaacgaagg 9319884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 7546540 - 7546443
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaa--gatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatga 166  Q
    ||||||||||||||||||||||||||| | ||||||||||  |||| |||||||||||||||  ||||| | |||||||||| |||||||||| |||||    
T  7546540 tgaaaatcacttatttagattgaaaga-agggggaaaaaaaagatgcagaggggtgattctagatcaaaaattgacctaaaatcacccctcctcgatga 7546443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 31271942 - 31272071
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || |||||| || ||||||||||||| ||| ||||||| |||||||||| |||| |||||||| || ||| ||| |||    
T  31271942 cacaaaagaaaaaacttgataaatgtgaaaaccatttatttagattgataga-aaggggacaaaagatgtaaagggatgattctaggttaaaaaataacc 31272040  T
Q  145 taaaaccac-ccctcctagatgaatgaagga 174  Q
    ||||| ||| ||||||| |||||| ||||||    
T  31272041 taaaatcacaccctcctcgatgaacgaagga 31272071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 43016782 - 43016645
Alignment:
Q  73 aaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtc-aaagaa-tgacctaaaaccacccctcctagatgaatga 170  Q
    ||||||||||| || ||||||||| |||||||||||||| || |||||||||||||| ||| |||||| |||||||||||||||| |||| |||||| ||    
T  43016782 aaatcacttatataaattgaaaga-aaggggaaaaaagacgtggaggggtgattctaggtcaaaagaactgacctaaaaccacccttcctcgatgaacga 43016684  T
Q  171 aggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    | |||        ||||||||||||||  ||||||||||    
T  43016683 aagagaaagaaaatttagagagaagttagagtttctctc 43016645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 38545729 - 38545625
Alignment:
Q  105 aaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagttt 204  Q
    ||||| || ||||||  |||||||| |||||| ||||||||||||||||| |||||  ||||| |||||||       ||||||||||||||||||||||    
T  38545729 aaaaaaatatagaggaatgattctaggtcaaaaaatgacctaaaaccaccactcctcaatgaacgaaggagaaagaaagtttagagagaagttgaagttt 38545630  T
Q  205 ctctc 209  Q
    |||||    
T  38545629 ctctc 38545625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 12149918 - 12150039
Alignment:
Q  45 tcacaaaag-aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||| ||||||| |||| || | |||| ||||||||||| || ||||| |||   ||||||| ||||||||||||||| || |||||| ||| ||    
T  12149918 tcacaaaagcaaaaactggatatatgtaaaaaccacttatttagcttaaaagaaaaga--aaaaaaggtgtagaggggtgattataggtcaaaaaataac 12150015  T
Q  144 ctaaaaccacccctcctagatgaa 167  Q
     |||||||||||||||| ||||||    
T  12150016 ttaaaaccacccctcctcgatgaa 12150039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 53508165 - 53508067
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    |||||||||||| || ||||||||||||||||| ||||||||| ||  |||||||||| | ||| |||||||| || |||||| |||||||||| |||||    
T  53508165 aaaaacttgatatatgtgaaaatcacttatttatattgaaaga-aaaaggaaaaaagacgcagatgggtgattttaggtcaaa-aatgacctaagaccac 53508068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 20987934 - 20988008
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagagg 119  Q
    ||||||||||||| || |||| || ||||||||||||||||| ||||||||| ||| ||||| ||||||||||||    
T  20987934 cacaaaagaaaaaactcgatatatttgaaaatcacttatttaaattgaaagaaaagaggaaagaagatgtagagg 20988008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 38860263 - 38860361
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaag-agaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacc 151  Q
    ||||||||||||||| |||||| |||||||||  |||||||| | ||| | ||||||||||||||||| ||||||||  ||||| | ||||||| ||||    
T  38860263 aaaaacttgatagatgtgaaaaccacttatttgaattgaaagaaaaagagaaaaaaagatgtagagggatgattctatatcaaaaattgacctagaacc 38860361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 149
Target Start/End: Complemental strand, 16235367 - 16235269
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaa-tcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    |||||||||||||||  || |||||| ||||||||||||||||||| | ||||  |||||||||| ||| | ||||||||| |||||| | |||||||||    
T  16235367 aaagaaaaacttgatgtatgtgaaaaatcacttatttagattgaaaaaaaagg--aaaaaagatgcagatgagtgattctaggtcaaaaattgacctaaa 16235270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 45424743 - 45424669
Alignment:
Q  67 atatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaa 147  Q
    |||| |||| |||||||||||||||||||      |||||||||||||||| | ||||||||| |||||||||||||||||    
T  45424743 atataaaaaccacttatttagattgaaag------ggaaaaaagatgtagatgagtgattctaggtcaaagaatgacctaa 45424669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 953566 - 953618
Alignment:
Q  77 cacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattcta 129  Q
    |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||    
T  953566 cacttatttagattgaaagaaaagggaaaaaaagatgcagaggagtgattcta 953618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 35175352 - 35175233
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtaga-ggggtgattctaagtc-aaagaatga 142  Q
    |||||||||||| |||||||| || || ||||||||| ||||||||||| || |||| ||||||| ||  ||| |||||||||||| ||| ||| |||||    
T  35175352 cacaaaagaaaacacttgatatatgtggaaatcacttgtttagattgaatga-aaggagaaaaaatattcagagggggtgattctaggtcaaaaaaatga 35175254  T
Q  143 cctaaaaccacccctcctaga 163  Q
    ||||||| |||||||| ||||    
T  35175253 cctaaaagcacccctcttaga 35175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 25631650 - 25631735
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    ||||||||||||||||||||||||| |||   |  ||||||||| |||||| ||||| || |||||| | ||||| |||||||||||||    
T  25631650 tgaaaatcacttatttagattgaaataga---gagaaaaagatggagagggatgattttaggtcaaaaattgacccaaaaccacccctc 25631735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 8914653 - 8914532
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||  || |||||||| |||||||  ||| ||| |   ||  |||||||||| |||||||| |||||| |||||| | ||||||||||    
T  8914653 aaagaaaaacttgatgtatgtgaaaatcccttattttaattaaaaaaaggggaaaaaaaagatgcagaggggttattctaggtcaaaaattgacctaaaa 8914554  T
Q  150 ccacccctcctagatgaatgaa 171  Q
     ||||||| || ||||| ||||    
T  8914553 tcaccccttctcgatgagtgaa 8914532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 4396495 - 4396577
Alignment:
Q  73 aaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtc-aaagaatgacctaaaaccacccctc 158  Q
    |||||||||||||| ||||||  ||||||||||||||||||   ||||||||||||| ||| ||| ||| |||||||||||| ||||    
T  4396495 aaatcacttatttaaattgaa--agaaggggaaaaaagatg--caggggtgattctaggtcaaaaaaataacctaaaaccactcctc 4396577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 29239266 - 29239183
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    ||||||||| ||||||||||  ||||| | |   ||||||||||||| ||||||||||||  ||||| |||||||||||||||||    
T  29239266 tgaaaatcatttatttagatctaaagaaaggaaaaaaaaagatgtag-ggggtgattctagatcaaaaaatgacctaaaaccacc 29239183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 37051751 - 37051644
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaagaaaaacttgata-gatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    |||||| |||||| |||||||||| ||||||||| ||||| | ||  ||| ||||||||||||| ||| || ||| | ||||| |||||| ||| |||||    
T  37051751 acaacgtcgcactaagacgacgaaatcacaaaaggaaaacctaattcgatgtgaaaatcacttacttaaatagaagg-gaaggagaaaaacgatttagag 37051653  T
Q  119 gggtgattc 127  Q
    |||||||||    
T  37051652 gggtgattc 37051644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 3785778 - 3785706
Alignment:
Q  72 aaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgaccta 146  Q
    ||||||||||||||  ||||||||| | ||  |||||||||| ||| | |||||||||||||||| |||||||||    
T  3785778 aaaatcacttatttgaattgaaagaaacgg--aaaaaagatgcagatgtgtgattctaagtcaaaaaatgaccta 3785706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 4821726 - 4821635
Alignment:
Q  81 tatttagattgaaagagaagg-ggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    |||||||||||||| | || | ||||||  |||| ||||| |||||| || |||||| |||||||||||||||||||| || || |||||||    
T  4821726 tatttagattgaaaaaaaaagaggaaaatggatgcagaggagtgattataggtcaaaaaatgacctaaaaccaccccttctcgacgaatgaa 4821635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 4178516 - 4178431
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    ||||||||||||||||||||||||| |||   |  ||||||||| ||| |||||||| || |||||  | ||||| |||||||||||||    
T  4178516 tgaaaatcacttatttagattgaaataga---gagaaaaagatgaagatgggtgattttaggtcaagaattgacccaaaaccacccctc 4178431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 38855160 - 38855244
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    ||||||||||||||||||||||| | |||   |  ||||||||| |||||||||||| |  ||| |||||||||| |||||||||||||    
T  38855160 tgaaaatcacttatttagattgatataga---gagaaaaagatgaagaggggtgattttcggtc-aagaatgacccaaaaccacccctc 38855244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 46934594 - 46934509
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    ||||||||||||||||||||||||| |||   |  | ||||||| ||||||||||||  | |||||| | ||||| |||||||||||||    
T  46934594 tgaaaatcacttatttagattgaaataga---gagagaaagatgaagaggggtgatttcaggtcaaaaattgaccaaaaaccacccctc 46934509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 51487032 - 51486941
Alignment:
Q  67 atatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcct 160  Q
    |||| ||||||||||||||||||||||  ||||  | | ||||||| ||||| | ||| |||| |||||| | |||||||||| ||||||||||    
T  51487032 atataaaaatcacttatttagattgaa--agaaatgaagaaaagatatagagagatgactctacgtcaaaaattgacctaaaatcacccctcct 51486941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 1649367 - 1649322
Alignment:
Q  51 aagaaaaacttgatagatatgaaaatcacttatttagattgaaaga 96  Q
    ||||||| ||||||| || |||||| ||||||||||||||||||||    
T  1649367 aagaaaatcttgatatatgtgaaaaccacttatttagattgaaaga 1649322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 1806461 - 1806553
Alignment:
Q  34 agacgacgaagtcacaaaagaaaaacttga-tagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgatt 126  Q
    |||||||||| ||||||||||||||| | | | ||| ||||||| ||||||||| || ||| | ||||| |||||| ||| |||||||||||||    
T  1806461 agacgacgaaatcacaaaagaaaaacctaattcgatgtgaaaataacttatttaaatagaatg-gaaggagaaaaacgatttagaggggtgatt 1806553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 36540660 - 36540725
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttattt 85  Q
    |||||| |||||| |||||||||| |||| ||||||||||   ||| || ||||||||||||||||    
T  36540660 acaacgtcgcactaagacgacgaaatcacgaaagaaaaacaaaataaatgtgaaaatcacttattt 36540725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 52116146 - 52116253
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || ||||||||||||||||| ||| ||| | ||||| |||||||||| ||| |  |||||||| || ||| || ||||    
T  52116146 cacaaaagaaaaaacttgatatatgtgaaaatcacttatttaaattaaaaca-aagggaaaaaaagatgcagatgaatgattctaggttaaa-aaagacc 52116243  T
Q  145 taaaaccacc 154  Q
    || |||||||    
T  52116244 tacaaccacc 52116253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 9797629 - 9797661
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaa 52  Q
    |||||||||||||||||||||||| ||||||||    
T  9797629 acaacgccgcacttagacgacgaaatcacaaaa 9797661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 12947416 - 12947464
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaa 93  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||    
T  12947416 cacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaa 12947464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 22290883 - 22290823
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatg 113  Q
    |||||| || ||| || ||||||||||||||||||||| ||||| |  |||||||||||||    
T  22290883 gaaaaatttaatatatgtgaaaatcacttatttagattaaaagaaagagggaaaaaagatg 22290823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 29249188 - 29249098
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    ||||||||||||| || |||||| ||||||||||||| ||| || ||| || ||||||||| ||||  ||||||||| |||||| | ||||||    
T  29249188 gaaaaacttgatatatgtgaaaaacacttatttagatcgaacga-aagagg-aaaaagatgaagagaagtgattctaggtcaaaaagtgacct 29249098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 53426923 - 53426859
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaagaaaaact-tgatagatatgaaaatcacttattt 85  Q
    |||| |||||| |||||||||| |||||||||||||| |   |||||| ||||||||||||||||    
T  53426923 aacgtcgcactaagacgacgaaatcacaaaagaaaaaatgaaatagatgtgaaaatcacttattt 53426859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 33053267 - 33053465
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||          |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  33053267 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaa 33053366  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||| |||||||       |||||||||||||||| ||||||||    
T  33053367 agatgtagagggatgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 33053465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 12170483 - 12170286
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaaga 111  Q
    |||||||||||||||||||||| ||||||||          |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||    
T  12170483 aacgccgcacttagacgacgaaatcacaaaaaacacaaaacgaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaaga 12170384  T
Q  112 tgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||       || ||||||||||||| ||||||||||    
T  12170383 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtctagagagaagttggagtttctctc 12170286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 3913709 - 3913872
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||| |||||||    
T  3913709 cacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaagagaatgggaaaaaagatgcggaggggtgattctaggtcaaaaaatgacc 3913808  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||| ||||||| ||||||  ||||||       |||||||||||||||| ||||||||||    
T  3913809 taaaacca-ccctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagtttctctc 3913872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 606195 - 605997
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| |||||||           |||||| ||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  606195 cacaacgccgcacttagacgacgaaatcacaaataacacaaaaggaaaaatttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaa 606096  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||||||||||| ||| |||||| |||||| ||||| |||||||||| |||||| |||||||       ||||||||| |||||| ||||||||    
T  606095 agatgtagaggggtgatcctaggtcaaaaaatgacataaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagaaaagttggagtttctc 605997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 23128609 - 23128411
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||| ||| ||||||||          |||||||||||||||| |||||| |||||||||||| ||||||| || ||| ||||    
T  23128609 cacaacgccgcacttagacgatgaaatcacaaaaaatacaaaaggaaaaacttgatagatgtgaaaaccacttatttagaatgaaagaaaatggggaaaa 23128510  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | |||||||  ||||| |||||||       |||||||||||||||  ||||||||    
T  23128509 agatgtagaggggtgattctaggtcaaaaaatgacctaaaactatccctcctcaatgaacgaaggagaaagaaagtttagagagaagttagagtttctc 23128411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 222
Target Start/End: Complemental strand, 30894604 - 30894414
Alignment:
Q  34 agacgacgaagtcacaaaagaaaaa--cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaag 131  Q
    |||||||||| |||||||| |||||  ||  ||| || |||||| || ||||||||||||||||| ||||| |||| ||||||||||||||||||||| |    
T  30894604 agacgacgaaatcacaaaaaaaaaaaactgaatatatgtgaaaaccagttatttagattgaaagaaaagggaaaaacagatgtagaggggtgattctagg 30894505  T
Q  132 tcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc-tagaaacctagaa 222  Q
    ||||| ||||| ||||||||||||||||| ||| || |||||||       ||||||||||||||||||||||||||| |||||| ||||||    
T  30894504 tcaaaaaatgatctaaaaccacccctcctcgattaacgaaggag-aaaaaagtttagagagaagttgaagtttctctcatagaaaactagaa 30894414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 53 - 207
Target Start/End: Original strand, 68144 - 68297
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtaga-ggggtgattctaagtcaaagaatgacctaaaacc 151  Q
    |||||||||||||||| |||||| |||||||||||||| ||||| |||||| ||||||||||||| |||||||||||| |||||| ||| ||||||||||    
T  68144 gaaaaacttgatagatgtgaaaaccacttatttagattaaaagaaaagggg-aaaaagatgtagagggggtgattctaggtcaaa-aattacctaaaacc 68241  T
Q  152 acccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    | ||||||| |||||| |||||||       |||||||||||||||| ||||||||    
T  68242 atccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 68297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 34018515 - 34018385
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||| ||||||| || |||||| |||||||||| ||||||||| || ||| ||| ||||||||||||||||||||| |||||| |||||||    
T  34018515 cacaaaagaaaaaacttgatatatgtgaaaaccacttatttaaattgaaagaaaatgggtaaagagatgtagaggggtgattctaggtcaaaaaatgacc 34018416  T
Q  145 taaaaccacccctcctagatgaatgaaggag 175  Q
    |||||||  || |||| |||||| |||||||    
T  34018415 taaaaccttccatcctcgatgaacgaaggag 34018385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 7515336 - 7515502
Alignment:
Q  46 cacaaaagaa-aaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtc-aaagaatgac 143  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||| |||| || ||| || || ||||||||||||||||||| ||| ||| ||| |     
T  7515336 cacaaaagaagaaacttgatagatgtgaaaaccacttatttagattggaagaaaaaggggaacaaaatgtagaggggtgattctaggtcaaaaaaataat 7515435  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
    ||||||||||||||||| |||||| ||| |||       |||||||||||||||| || ||||||||    
T  7515436 ctaaaaccacccctcctcgatgaacgaaagagaaagcaagtttagagagaagttggagcttctctct 7515502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 29320037 - 29320127
Alignment:
Q  85 tagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggag 175  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||  ||||||||||||||||| |||| |||||| |||||||    
T  29320037 tagattgaaagaaaaggggaaaaaagatgtagaggggtgattctagatcaaaatatgacctaaaaccacccatcctcgatgaacgaaggag 29320127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 545973 - 545854
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||  || |||||||  |||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||| |||| |||||||    
T  545973 aaagaaaaacttgatgtatgtgaaaattgcttatttagattgaaaga-aaggggaaaaaagatgtagaagagtgattctaggtcaaa-aatggcctaaaa 545876  T
Q  150 ccacccctcctagatgaatgaa 171  Q
     |||||||||| ||||| ||||    
T  545875 tcacccctcctcgatgagtgaa 545854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 30776619 - 30776508
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    |||||||||||||||||||  || || |||| ||||||||||||||||||| |||| ||||||| ||| ||||||||||||||| |||||| | ||||||    
T  30776619 cacaaaagaaaaacttgatgtatgtggaaattacttatttagattgaaaga-aaggagaaaaaatatgcagaggggtgattctaggtcaaaaattgacct 30776521  T
Q  146 aaaaccacccctc 158  Q
    |||| ||||||||    
T  30776520 aaaatcacccctc 30776508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 32059853 - 32059738
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    |||||||||||| || ||||||  ||||||||||||||||||| |||||  ||||||||||||| || |||||||| |||||| |||||| |||||||||    
T  32059853 aaaaacttgatacatgtgaaaactacttatttagattgaaagaaaaggg--aaaaagatgtagaaggatgattctaggtcaaacaatgacttaaaaccac 32059756  T
Q  154 ccctcctagatgaatgaa 171  Q
    |  |||| ||||||||||    
T  32059755 ctatcctcgatgaatgaa 32059738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 32191868 - 32191993
Alignment:
Q  47 acaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    ||||||||||| |||||||| || |  ||||||||||||||||| |||| | |||||| ||||||||| ||| |||||||| ||  ||||| || |||||    
T  32191868 acaaaagaaaacacttgatatatgtagaaatcacttatttagatcgaaataaaagggggaaaaagatgcagaagggtgattgtagatcaaaaaaggacct 32191967  T
Q  146 aaaaccacccctcctagatgaatgaa 171  Q
    ||||||||||||||| ||||||||||    
T  32191968 aaaaccacccctccttgatgaatgaa 32191993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 30608659 - 30608777
Alignment:
Q  55 aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    ||||||||||| || |||||| |||| ||||||||||||||| |||| | ||||| ||||||||||||||||||| |||||| ||||||||||||||| |    
T  30608659 aaaacttgatatatgtgaaaaccactaatttagattgaaagaaaaggag-aaaaatatgtagaggggtgattctaggtcaaa-aatgacctaaaaccatc 30608756  T
Q  155 cctcctagatgaatgaaggag 175  Q
    | ||||  ||| |||||||||    
T  30608757 catccttaatggatgaaggag 30608777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 29255586 - 29255741
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||||||| || ||| ||||| |||||||||||||||||||| |||||| ||||||||||||| |  ||||| ||  |||||||||||| |||||||||    
T  29255586 aaaaacttgttatataagaaaaccacttatttagattgaaagaaaagggggaaaaagatgtagatgaatgattttagatcaaagaatgacataaaaccac 29255685  T
Q  154 ccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
      ||| | |||||| |||||||       |||| ||||||||||| | ||||||||    
T  29255686 atctcttcgatgaacgaaggagaaagagagtttggagagaagttggaatttctctc 29255741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 32327360 - 32327427
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggg 120  Q
    |||||||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||||| ||||    
T  32327360 gaaaaacttgatagatgtgaaaaccacttatttatattgaaagaaaaggggaaaaaagatgtaaaggg 32327427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 14801157 - 14801047
Alignment:
Q  49 aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    |||| |||||||||||  || ||||||| ||||||||||||||||||| |||||||||||| ||  |||||||||||||||  ||||| | | |||||||    
T  14801157 aaaaaaaaaacttgatgtatgtgaaaattacttatttagattgaaaga-aaggggaaaaaatatacagaggggtgattctagatcaaaaattaacctaaa 14801059  T
Q  149 accacccctcct 160  Q
    | |||| |||||    
T  14801058 atcacctctcct 14801047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 1523354 - 1523248
Alignment:
Q  51 aagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaac 150  Q
    ||||||||||||||  || || |||||||||||||||||||||||| ||| |  ||||| ||| ||| ||||||||||| |||||| | ||||||||||     
T  1523354 aagaaaaacttgatgtatgtggaaatcacttatttagattgaaagaaaagag--aaaaaaatgcaga-gggtgattctaggtcaaaaattgacctaaaat 1523258  T
Q  151 cacccctcct 160  Q
    ||||||||||    
T  1523257 cacccctcct 1523248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 8102673 - 8102557
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaagggg--aaaaaagatgtagaggggtgattctaagtcaaagaat-ga 142  Q
    |||||||||||||||||||   | ||||||||||||||||||||||||||| |||| |  |||||| ||| ||||||||||||||| |||||| | |  |    
T  8102673 cacaaaagaaaaacttgatgtttgtgaaaatcacttatttagattgaaaga-aaggagaaaaaaaatatgcagaggggtgattctaggtcaaaaattaaa 8102575  T
Q  143 cctaaaaccacccctcct 160  Q
    ||||||| ||||||||||    
T  8102574 cctaaaatcacccctcct 8102557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 24227858 - 24227974
Alignment:
Q  57 aacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaa--tgacctaaaaccacc 154  Q
    ||||||||| || |||||| ||||||||||  |||||||| ||||||  ||||||||||||||| ||||| || || ||| ||  ||||||||||||||     
T  24227858 aacttgatatatgtgaaaaccacttatttaagttgaaaga-aaggggggaaaagatgtagagggctgattttatgtaaaaaaaaatgacctaaaaccact 24227956  T
Q  155 cctcctagatgaatgaag 172  Q
    |||||| |||||||||||    
T  24227957 cctccttgatgaatgaag 24227974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 30493484 - 30493378
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || || ||||||||||||||| |||||||| |  ||||||||||||| |   ||||||||||| |||||| |||||||    
T  30493484 cacaaaagaaaacacttgatatatgtggaaatcacttatttagtttgaaagaaa--gggaaaaaagatgcat--gggtgattctaggtcaaaaaatgacc 30493389  T
Q  145 taaaaccaccc 155  Q
     ||||||||||    
T  30493388 gaaaaccaccc 30493378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 153
Target Start/End: Original strand, 528502 - 528596
Alignment:
Q  60 ttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtaga-ggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    |||||| |||||||||  ||||||||| ||| ||||| ||||| |||||||||| ||| ||||||||| ||  ||||| ||||||||||||||||    
T  528502 ttgatatatatgaaaaatacttatttaaattaaaagaaaagggaaaaaaagatgcagatggggtgattatagatcaaataatgacctaaaaccac 528596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 33740701 - 33740786
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    ||||||||||||||||||||||||| |||   |  ||||||||| |||||||||||| || |||||  | ||||| |||||||||||||    
T  33740701 tgaaaatcacttatttagattgaaataga---gagaaaaagatgaagaggggtgattttaggtcaagaattgaccaaaaaccacccctc 33740786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 34222717 - 34222653
Alignment:
Q  77 cacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||||||||||| || ||| ||||||    
T  34222717 cacttatttagatcgaaaga-aaggggaaaaa-gatgtagaggggtgattctaggttaaaaaatgac 34222653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 127661 - 127521
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    |||||||| |||||||||||||||| ||||||||          ||||||||||||| || |||||| |||||||||||   |||||| || ||| ||||    
T  127661 cacaacgctgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatatatgtgaaaaccacttatttag---gaaagaaaatggg-aaaa 127566  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccaccc 155  Q
    |||||||||||||||||| ||  ||||| ||| ||||||||||||||    
T  127565 agatgtagaggggtgattttagatcaaa-aat-acctaaaaccaccc 127521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 32328790 - 32328882
Alignment:
Q  117 aggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||| || |||||| | |||| |||||||||||||||| |||||| |||||||       || ||||||||||||  ||||||||||    
T  32328790 aggggtgattataggtcaaaaactgacttaaaaccacccctcctcgatgaacgaaggagaaagaaagtatagagagaagttagagtttctctc 32328882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 12652894 - 12652809
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    ||||||||||||||||||||||||| |||   |  ||||||||| ||||||||||||  | |||||  | ||||| |||||||||||||    
T  12652894 tgaaaatcacttatttagattgaaataga---gagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctc 12652809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 679050 - 678951
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    |||||||||||| || ||||||||  ||||||||||||||||| ||| ||||||| | || | | | |||||| |  |||||| ||||||||||||||||    
T  679050 aaaaacttgatatatgtgaaaatcggttatttagattgaaaga-aagtggaaaaaggttgaaaatgagtgattatgtgtcaaa-aatgacctaaaaccac 678953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 28981127 - 28981022
Alignment:
Q  49 aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    |||| ||| |||||||| || || |||||||||||||||||||||  |||| ||||||||||||   || |  | |||||| |||||| |||||||||||    
T  28981127 aaaaaaaacacttgatatatgtggaaatcacttatttagattgaa--agaaagggaaaaaagatacggaagaataattctaggtcaaa-aatgacctaaa 28981031  T
Q  149 accacccct 157  Q
    |||| ||||    
T  28981030 accaaccct 28981022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 34489170 - 34489117
Alignment:
Q  105 aaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    ||||||||| |||||||||||| ||||||||| | ||| | |||||||||||||    
T  34489170 aaaaagatgaagaggggtgattttaagtcaaaaattgatcaaaaaccacccctc 34489117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 22571434 - 22571361
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattcta 129  Q
    |||||||||||| || || |||||||||||||||||   || ||||| |||||||||||| ||| || ||||||||    
T  22571434 aaaaacttgatatatgtggaaatcacttatttagat--caaaagaagaggaaaaaagatgcagatggttgattcta 22571361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 2520751 - 2520587
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||| |||||||    
T  2520751 cacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaacgaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacc 2520652  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||||||||| |||||| |||||||       |||||||||||||||| ||||||||||    
T  2520651 taaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctc 2520587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 4142854 - 4143051
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||          |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  4142854 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaa-cacttatttagattgaaagaaaaggggaaaaa 4142952  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||  ||||||       ||||| |||||||||| ||||||||    
T  4142953 agatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacaaaggagaaagaaagtttatagagaagttggagtttctc 4143051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 19853611 - 19853808
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaaga----------aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| |||||||| |          |||||||||||||| |||||| ||||||||||||||| |||| |||||||||||    
T  19853611 cacaacgccgcacttagacgacgaaatcacaaaaaacaaaaaagaaaaaacttgatagatgtgaaaaccacttatttagattggaagaaaaggggaaaaa 19853710  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||| |       |||||||||||||||| ||||||||    
T  19853711 agatgtagaggggtgattctaggtcaaa-aatgacctaaaaccacccctcctcgatgaatgaaggggaaagaaagtttagagagaagttggagtttctc 19853808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 22611193 - 22610996
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||          || ||||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  22611193 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggataaacttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaa 22611094  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||||||||| || ||| |||||||       |||||||||||||||| ||||||||    
T  22611093 agatgtagatgggtgattctaggtcaaa-aatgacctaaaaccacccctcctcgacgaacgaaggagaaagaaagtttagagagaagttggagtttctc 22610996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 208
Target Start/End: Complemental strand, 43510207 - 43510010
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa--------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaag 110  Q
    ||||||||||||||||||||||||| ||||||||        ||||||||||||| || |||||  |||||||||||||||||||| ||||| |||||||    
T  43510207 cacaacgccgcacttagacgacgaaatcacaaaaaacgaaaggaaaaacttgataaatgtgaaagccacttatttagattgaaagaaaagggaaaaaaag 43510108  T
Q  111 atgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctct 208  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||| || | |||||| |||||||       ||||| ||||||||||||||||||||    
T  43510107 atgtagaggagtgattctaggtcaaaaaatgacctaaaaccacccttcttcgatgaacgaaggagaatgaaagtttaaagagaagttgaagtttctct 43510010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 22558599 - 22558765
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaa-ggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||| ||||||    
T  22558599 cacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaaggggaaaaaagatgtagagaggtgattctatgtcaaaaaatgac 22558698  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
    |||||||||||||||||  ||||| |||||||       |||||||||||| ||| |||||||||||    
T  22558699 ctaaaaccacccctcctcaatgaacgaaggagaaagaaagtttagagagaaattggagtttctctct 22558765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 53810990 - 53810840
Alignment:
Q  57 aacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccc 156  Q
    |||||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| || |||||| |||||||||||||||||||    
T  53810990 aacttgatagatgtgaaaatcacttatttaaattgaaagaaaagggggaaaaagatgtagaggggtgattataggtcaaaaaatgacctaaaaccacccc 53810891  T
Q  157 tcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||| |||||| |||||||       ||||||||||||| || ||||||||    
T  53810890 tcctcgatgaacgaaggaggaagaaagtttagagagaagctggagtttctc 53810840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 21686344 - 21686539
Alignment:
Q  23 acgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagat 112  Q
    ||||||||||||||||||||| ||||||||          |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  21686344 acgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagat 21686443  T
Q  113 gtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||||||| || |||||| || ||||| |||||||||||||| ||||||  ||||||       ||||||||||||||| |||||||||||    
T  21686444 gtagaggggtgattttaggtcaaa-aaagacctcaaaccacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttaaagtttctctc 21686539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 32766524 - 32766377
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    |||||| |||||||||||||||||| ||||||||          |||||||||||||||| |||||| |||||| ||||||||||||| |||||||||||    
T  32766524 cacaacaccgcacttagacgacgaaatcacaaaaaaccaaaaaggaaaaacttgatagatgtgaaaaacacttacttagattgaaagaaaaggggaaaaa 32766425  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccc 156  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  32766424 agatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccc 32766377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 26633770 - 26633969
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaaga----------aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| |||||||| |          |||||||||||||| |||||| |||||||||||||||||||| ||| ||||||     
T  26633770 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagaggaaaa- 26633868  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctct 208  Q
    ||||||| ||||||||||||| |||||| |||||||||| ||||||||||||  ||||| |||| ||       |||||||||||||||| |||||||||    
T  26633869 agatgtataggggtgattctaggtcaaaaaatgacctaagaccacccctcctcaatgaacgaagaagaaagaaagtttagagagaagttggagtttctct 26633968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 13634125 - 13633924
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaaga----------aaaacttgatagatatgaaaatcacttatttagattgaaagagaa--ggggaaa 106  Q
    ||||||||||||||||||||||||| |||||||| |          |||||||||||||| |||||| |||||||||||||||||||| ||  ||||  |    
T  13634125 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagggggggga 13634026  T
Q  107 aaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttct 206  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||  |||||||       |||||||||||||||| |||||||    
T  13634025 aaagatgtagaggggtgattctatgtcaaa-aatgacctaaaaccaccactcctcgatgagcgaaggagaaagaaagtttagagagaagttggagtttct 13633927  T
Q  207 ctc 209  Q
    |||    
T  13633926 ctc 13633924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 24099217 - 24099328
Alignment:
Q  57 aacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtc-aaagaatgacctaaaaccaccc 155  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||     
T  24099217 aacttgatagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagagggatgattctaggtcaaaaaaatgacctaaaaccacct 24099316  T
Q  156 ctcctagatgaa 167  Q
    ||||| ||||||    
T  24099317 ctcctcgatgaa 24099328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 5119305 - 5119148
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagt-caaagaatgacctaaaacc 151  Q
    ||||||||||||| || |||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||  ||| |||||| |||||||    
T  5119305 gaaaaacttgatatatgtgaaaaccacttatttagattgaaagaagagggggaaaaagatgtagaggggtgattctaggtaaaaaaaatgacataaaacc 5119206  T
Q  152 acccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||||| ||||||||||||||       ||||||| |||||||||| ||| ||||    
T  5119205 acccctccttgatgaatgaaggagaaataaagtttagaaagaagttgaaatttatctc 5119148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 56040788 - 56040896
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaaga-gaaggggaaaaaagatgtagaggggtgattctaagtc-aaagaatgacctaaaacc 151  Q
    ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  56040788 aaaaacttgatagatgtgaaaaccacttatttagattgaaagaagaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaaatgacctaaaacc 56040887  T
Q  152 acccctcct 160  Q
    ||| |||||    
T  56040888 acctctcct 56040896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 206
Target Start/End: Complemental strand, 35348278 - 35348119
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    ||||||||||||||||||||  | |||||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||| ||||||||    
T  35348278 cacaaaagaaaaacttgatatttgtgaaaaccacttatttagattgaaagaaaaggg-aaaaaagatgtagagaggtgattctaggtcaaaaaatgacct 35348180  T
Q  146 aaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttct 206  Q
    |||| |||||||||  |||||  |||||||       ||||| |||||||||| |||||||    
T  35348179 aaaatcacccctccacgatgagcgaaggagaaaaaaagtttaaagagaagttggagtttct 35348119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 54021827 - 54021671
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||| |||| || |||||| |||||||||||||||||||| ||| ||||||||||||||||||| ||||| || |||||| |||||||||||||||    
T  54021827 gaaaaactggatatatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagagggatgattttatgtcaaaaaatgacctaaaacca 54021728  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    | |  ||| ||||||||||| ||       |||||||||||| ||||||||||||||    
T  54021727 ctctccctcgatgaatgaagaagaaagaaagtttagagagaaattgaagtttctctc 54021671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 27651947 - 27651796
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    |||||||  ||||| |||||||||| |||| |||||||||||||||  || ||||||||||||||||||||||||||| || ||||||||||||| |||     
T  27651947 cacaacgttgcactaagacgacgaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aatgggaaaaaagatgcagat 27651849  T
Q  119 gggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    ||||||| ||| |||||| | |||||||| | |||||||||| ||||| ||||    
T  27651848 gggtgatcctaggtcaaaaattgacctaacatcacccctcctcgatgagtgaa 27651796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 26091057 - 26091212
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||||  || |||||| |||||||||||||||||| | |||| |||||||||| |||||||||||||||| |||||| ||| |||||||| ||    
T  26091057 gaaaaacttgatttatgtgaaaaccacttatttagattgaaataaaaggagaaaaaagat-tagaggggtgattctaggtcaaaaaataacctaaaatca 26091155  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    | | |||| ||||||||||||||       |||||||||||||||| ||||||||||    
T  26091156 ctcatcctcgatgaatgaaggagaaagaaggtttagagagaagttggagtttctctc 26091212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 209
Target Start/End: Complemental strand, 9178306 - 9178167
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    |||||| || ||||||||||||||||| |||||  ||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||| ||||||||    
T  9178306 tgaaaaccatttatttagattgaaagaaaagggagaaaaagatgtagaagggtgattctaggtcaaaaaatgacctaagaccacccctccttgatgaatg 9178207  T
Q  170 aaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||        |||||||||||  |||||||||||||    
T  9178206 aaggagaaagaaattttagagagaaactgaagtttctctc 9178167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 9165202 - 9165342
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaaga-atgacctaaaaccacccctcctagatgaat 168  Q
    |||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||| || ||| | |||||||||||||||| ||||| |||||||    
T  9165202 tgaaaaccacttatttagattgaaagataagggagaaaaagatgtagaggggtgattctaggtaaaaaatatgacctaaaaccacctctcctcgatgaat 9165301  T
Q  169 gaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    || |||        |||||||||||||||| ||||||||||    
T  9165302 gatggaaaaagaaagtttagagagaagttggagtttctctc 9165342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 70 - 209
Target Start/End: Complemental strand, 10496290 - 10496152
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    |||||| |||||||||||||| ||||| || ||||||||||||||| |||| |||||||| |||||| | |||||||||||||| |||||| |||||| |    
T  10496290 tgaaaaccacttatttagattaaaagaaaatgggaaaaaagatgtataggg-tgattctaggtcaaaaattgacctaaaaccacacctcctcgatgaacg 10496192  T
Q  170 aaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||       ||||||| |||||||| ||||||||||    
T  10496191 aaggagtaagaaagtttagaaagaagttggagtttctctc 10496152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 51888352 - 51888477
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || |||||||||||| ||||||| | |||| ||||||| |||||||  ||||||||||||| | |||||| |||||||    
T  51888352 cacaaaagaaaacacttgatatatgtgaaaatcacttgtttagatcggaaga-aaggggataaaagattgagaggggtgattcaatgtcaaaaaatgacc 51888450  T
Q  145 taaaaccacccctcctagatgaatgaa 171  Q
    |||||||||||||||| ||||| ||||    
T  51888451 taaaaccacccctcctcgatgagtgaa 51888477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 47320537 - 47320657
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||  |||||||  | |||||||||||||||||||| ||| || |||||||||||||||| ||||  |||||| |||||||||||||||||    
T  47320537 cacaaaagaaaacgcttgatatttgtgaaaatcacttatttagatcgaacga-aaggggaaaaaagatgcagagttgtgattttaagtcaaagaatgacc 47320635  T
Q  145 taaaaccacccctcctagatga 166  Q
    ||||||||||||| || |||||    
T  47320636 taaaaccaccccttctcgatga 47320657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 166
Target Start/End: Complemental strand, 18935770 - 18935640
Alignment:
Q  34 agacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtc 133  Q
    |||||||||| |||| || ||||||||||||  || ||||||||||| ||||||||| ||||| |||||||||||||||| ||| ||||||||||| |||    
T  18935770 agacgacgaaatcacgaacgaaaaacttgatgtatgtgaaaatcactaatttagattaaaaga-aaggggaaaaaagatgcaga-gggtgattctaggtc 18935673  T
Q  134 aaagaatgacctaaaaccacccctcctagatga 166  Q
    ||| | |||||| ||| |||||||||| |||||    
T  18935672 aaaaattgaccttaaatcacccctcctcgatga 18935640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 36194712 - 36194572
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    ||||||| |||||| |||| ||||| |||| |||||||||||||||  || ||||||||||||||||| ||||||||| |||| ||||||||||| ||||    
T  36194712 cacaacgtcgcactaagacaacgaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaaga-aaggagaaaaaagatgcagag 36194614  T
Q  119 gggtgattctaagtcaaagaatgacctaaaaccacccctcct 160  Q
    || || || || |||||| | ||| |||||| ||||| ||||    
T  36194613 ggatgtttttaggtcaaaaattgatctaaaatcacccatcct 36194572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 45418492 - 45418339
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||||| || |||||| | |||||||| ||||| ||| ||| |||||| || ||||||||| |||||||| |||||| |||||||||||||||    
T  45418492 gaaaaacttgatatatgtgaaaacctcttatttatattgagagaaaagaggaaaagaggtgtagagggatgattctaggtcaaaaaatgacctaaaacca 45418393  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
       ||||| |||||||| |||||        ||||||||||||||||||||| ||||    
T  45418392 ---ctcctcgatgaatggaggagaaaaaatttttagagagaagttgaagtttttctc 45418339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 29961068 - 29961228
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattg----aaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    |||||||||||||||| ||||||||||||||||||||||    ||| | ||  |||||||||| ||||| ||||||||||| |||||| ||| |||||||    
T  29961068 gaaaaacttgatagatgtgaaaatcacttatttagattgaaaaaaaaaaaaaaggaaaaaagaagtagatgggtgattctatgtcaaaaaataacctaaa 29961167  T
Q  149 accacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    | || ||||| | ||||||  |||||        |||||||||||||||| ||||||||||    
T  29961168 atcatccctcttcgatgaacaaaggaaaaagaaagtttagagagaagttggagtttctctc 29961228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 33921061 - 33920862
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaag----------aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||           |||||||||||| || ||||||||||||||||  ||||||||| ||||| |||||    
T  33921061 cacaacgccgcacttagacgacgaaatcacaaaaagcacaaaagaaaaaacttgatatatgtgaaaatcacttattt--attgaaagaaaagggaaaaaa 33920964  T
Q  109 agatgtagaggggtgattctaag-tcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||| ||||| || |  | | ||| |||||||||||||||||| | || ||||||||||| ||       |||||| || |||||||||||||||    
T  33920963 agatgtagatgggtgcttttgggttaaaaaaatgacctaaaaccacccattctcgatgaatgaagaagaaagaaagtttagggaaaagttgaagtttctc 33920864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 36161676 - 36161567
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||| |||||| || | ||||||||||||||||||||||||| || |||||||||  || ||| ||||||||||| |||||| ||||||||||||||||    
T  36161676 aaaaaattgatatatgtaaaaatcacttatttagattgaaaga-aatgggaaaaaa--tgcagatgggtgattctaggtcaaaaaatgacctaaaaccac 36161580  T
Q  154 ccctcctagatga 166  Q
    | ||||| |||||    
T  36161579 ctctcctcgatga 36161567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 9713872 - 9713798
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattcta 129  Q
    |||||||||||| || || |||||||||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  9713872 aaaaacttgatatatgtggaaatcacttatttagattgaaaga-aaggggaaaaaagatgtagagaagtgattcta 9713798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 22038936 - 22039059
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| |||  |||| ||||||||||||| | | |||||||||||  || || | |||||    
T  22038936 cacaaaagaaaaaacttgatagatgtgaaaatcacttatttagatagaa--agaaagggaaaaaagatgca-aagggtgattctagatccaaaattgacc 22039032  T
Q  145 taaaaccacccctcctagatgaatgaa 171  Q
    ||||||||||||| || ||||| ||||    
T  22039033 taaaaccacccctgctcgatgagtgaa 22039059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 22300793 - 22300654
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    ||||||||||||||||| ||||||||| ||| | ||||| |||| | |||||||||| || |||||| |||||||||||||||| |||||| || || ||    
T  22300793 tgaaaatcacttatttaaattgaaagaaaagag-aaaaaggatgcaaaggggtgattttaggtcaaaaaatgacctaaaaccactcctcctcgacgagtg 22300695  T
Q  170 aaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
    || |||        ||||||||||||||| |||||||||||    
T  22300694 aaagagaaataaaatttagagagaagttggagtttctctct 22300654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 22063948 - 22064019
Alignment:
Q  77 cacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||||||| |||| ||||||| ||| ||||||||||||||| |||||| ||||||||||||    
T  22063948 cacttatttagattgaaaga-aaggagaaaaaatatgcagaggggtgattctaggtcaaaaaatgacctaaaa 22064019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 36204487 - 36204641
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcac----aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgt 114  Q
    ||||||||||||||||||||||||| ||||    |||| ||| |||||||  || || |||||||||||||| || |||||| ||  ||||| || |||     
T  36204487 cacaacgccgcacttagacgacgaaatcacgaagaaaaaaaacacttgatctatgtggaaatcacttatttaaatcgaaaga-aaaaggaaacaaaatgc 36204585  T
Q  115 agaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    ||||||||||||||| || ||| ||||||||||||||| || |||| ||||| ||||    
T  36204586 agaggggtgattctaggt-aaaaaatgacctaaaaccatccatccttgatgattgaa 36204641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 1621601 - 1621707
Alignment:
Q  13 ggacatcacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagat 112  Q
    ||||| ||||||| |||||| | | ||| || |||| |||||||||||||||  || |||||||||||||||||||||||| || | ||| |||||||||    
T  1621601 ggacaacacaacgtcgcactaaaatgacaaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaatgaaaggggaaaaaaagat 1621700  T
Q  113 gtagagg 119  Q
    | |||||    
T  1621701 gcagagg 1621707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 9643354 - 9643241
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa--gatgtagaggggtgattctaagtcaaagaatga 142  Q
    |||||||||||| || ||||| || |||||||||||||||||||| |||||| | ||| ||||||  |||| ||| | ||||||||| |||||| |||||    
T  9643354 cacaaaagaaaacacatgatatatgtgaaaatcacttatttagatcgaaagaaatgggaaaaaaaaagatgcagatgagtgattctaggtcaaaaaatga 9643255  T
Q  143 cctaaaaccacccc 156  Q
    | ||||||||||||    
T  9643254 cataaaaccacccc 9643241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 10259040 - 10259136
Alignment:
Q  55 aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||| || |||||| || || ||||||| |||||| ||| | ||||| ||||||||||||||||| || |||||| |||||||||||||||    
T  10259040 aaaacttgatatatgtgaaaaccatttgtttagatcgaaagaaaagagaaaaaacgatgtagaggggtgattttaggtcaaa-aatgacctaaaacca 10259136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 37030228 - 37030109
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||||||||||  | ||||||||| ||||||| ||||||||| |||| || |||||||| | |||||||||||||||| ||| ||  | ||| |||||     
T  37030228 aaaaacttgatatgtgtgaaaatcatttatttaaattgaaaga-aaggagagaaaagatgcaaaggggtgattctaagt-aaaaaagaatctagaaccat 37030131  T
Q  154 ccctcctagatgaatgaaggag 175  Q
    ||||||| ||||||||||||||    
T  37030130 ccctcctcgatgaatgaaggag 37030109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 43095595 - 43095521
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaagggg--aaaaaagatgtagaggggtgatt 126  Q
    ||||||| |||| || |||||| |||||||||||||||||||| ||| ||  |||||||||||||||||||||||    
T  43095595 aaaaactcgatatatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaaaagatgtagaggggtgatt 43095521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 21225344 - 21225417
Alignment:
Q  78 acttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||| ||||||| |||||||||||||||| |||| ||||||| ||  ||||| |||||||||||||||    
T  21225344 acttatttagaatgaaaga-aaggggaaaaaagatggagagaggtgattttagatcaaaaaatgacctaaaacca 21225417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 44596629 - 44596563
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggg 120  Q
    ||||||||| || || ||||||||  ||||||| ||||||||| |||||||||||||||||||||||    
T  44596629 aaaaacttgttatatgtgaaaatcggttatttaaattgaaagaaaaggggaaaaaagatgtagaggg 44596563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 53444128 - 53443936
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaa-----aacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatg 113  Q
    ||||||| || |||||||||||||| |||||||| |||     |||||||||  | |||||  |||||||||| ||||||| | |||   |||||| |||    
T  53444128 cacaacgtcgtacttagacgacgaaatcacaaaaaaaacaaaaaacttgatatgtgtgaaac-cacttatttaaattgaaataaaagacaaaaaaa-atg 53444031  T
Q  114 tagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||| ||||| |||||| ||||||||||||||| | |||||  ||||| ||| |||       |||||||||||||||||||||| ||||    
T  53444030 tagaggggtgtttctaggtcaaa-aatgacctaaaaccaacgctcctcaatgaacgaaagagaaaaaaagtttagagagaagttgaagtttatctc 53443936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 48257647 - 48257704
Alignment:
Q  108 aagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatg 165  Q
    |||||||||| ||||||||||| |||||| |||||| |||||||||||||||| ||||    
T  48257647 aagatgtagatgggtgattctaggtcaaaaaatgacataaaaccacccctcctcgatg 48257704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 23926168 - 23926013
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaagaaaaacttga-tagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    ||||||||||||| |||||||||| |||| |||||||||| | | | ||| ||||||||||||||||| || | ||| ||||| ||||||  |  |||||    
T  23926168 acaacgccgcactaagacgacgaaatcacgaaagaaaaacctaactcgatgtgaaaatcacttatttaaatag-aagggaaggagaaaaacaagttagag 23926070  T
Q  119 gggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggag 175  Q
    ||||||||  |  ||||| ||||||| ||||| ||||||| | |||| || ||||||    
T  23926069 gggtgatttgagatcaaaaaatgacccaaaactacccctctttgatggataaaggag 23926013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 52978833 - 52978749
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa---------gaaaaacttgatagatatgaaaatcacttatttagattgaaa 94  Q
    |||||||||||||||||||| |||| ||||||||         ||||||||||||| || |||||||||||||||||||||||||    
T  52978833 cacaacgccgcacttagacgccgaaatcacaaaaaacccaaaggaaaaacttgatatatgtgaaaatcacttatttagattgaaa 52978749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 18048831 - 18048749
Alignment:
Q  73 aaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtc-aaagaatgacctaaaaccacccctc 158  Q
    |||||||||||||| ||||||  ||||||||||||||||||   ||||||||||||| ||| ||| ||| |||||||||||| ||||    
T  18048831 aaatcacttatttaaattgaa--agaaggggaaaaaagatg--caggggtgattctaggtcaaaaaaataacctaaaaccactcctc 18048749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 21231603 - 21231678
Alignment:
Q  76 tcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||||| ||||||| ||| | |||||||||| |||| ||||||| ||  ||||| |||||||||||||||    
T  21231603 tcacttatttagaatgaaaga-aagagaaaaaaagatggagagaggtgattttagatcaaaaaatgacctaaaacca 21231678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 40066198 - 40066262
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtaga 117  Q
    ||||||||| | | || |||||| |||||||||| ||||||||| ||| ||||||||||||||||    
T  40066198 gaaaaacttaaaatatgtgaaaaccacttatttatattgaaagaaaagaggaaaaaagatgtaga 40066262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 4937796 - 4937757
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaa 93  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  4937796 aaaaacttaatatatatgaaaatcacttatttagattgaa 4937757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 36804544 - 36804611
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaag-aaaaacttgatagatatgaaaatcacttattta 86  Q
    |||| |||||||| |||||||||| ||||||||| ||||||   ||| ||||||||||||||||||||    
T  36804544 acaatgccgcactaagacgacgaaatcacaaaagaaaaaaccaaatatatatgaaaatcacttattta 36804611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 43154144 - 43154224
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    ||||||||||||||||||||||||| |||    || |||||||| ||||||||||||  |||||||  | ||||| |||||||||    
T  43154144 tgaaaatcacttatttagattgaaataga----gagaaaagatgaagaggggtgatttcaagtcaagaattgacccaaaaccacc 43154224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 8009441 - 8009506
Alignment:
Q  29 cacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaa 94  Q
    |||||||| || ||| |||||||  ||||||| |||  || |||||||||||||||||||||||||    
T  8009441 cacttagatgatgaaatcacaaagaaaaaactagatctatgtgaaaatcacttatttagattgaaa 8009506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 9634645 - 9634564
Alignment:
Q  49 aaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattcta 129  Q
    ||||||||| || ||||| || |||||||||||||||||||| |||||| | | | |||||||||| ||| || ||||||||    
T  9634645 aaaagaaaacacatgatatatgtgaaaatcacttatttagatcgaaagaaatgagaaaaaaagatgcagatggatgattcta 9634564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 17949423 - 17949456
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa 52  Q
    ||||||||||||||||||||||||| ||||||||    
T  17949423 cacaacgccgcacttagacgacgaaatcacaaaa 17949456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 17953275 - 17953308
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa 52  Q
    ||||||||||||||||||||||||| ||||||||    
T  17953275 cacaacgccgcacttagacgacgaaatcacaaaa 17953308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 37188690 - 37188739
Alignment:
Q  45 tcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaa 94  Q
    |||||||  ||||||| |||| || |||||||||||||||||||||||||    
T  37188690 tcacaaagaaaaaactagatatatgtgaaaatcacttatttagattgaaa 37188739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 52944260 - 52944223
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaa 107  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  52944260 tgaaaatcacttatttagattgaaagaaaagggaaaaa 52944223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 11817192 - 11817093
Alignment:
Q  27 cgcacttagacgacgaagtcacaaaagaaaaacttgataga-tatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgat 125  Q
    |||||| |||| ||||| |||| |||||||||||| ||  | | ||||||||||||||||| |   |||| ||||| |||||| ||||||||||||||||    
T  11817192 cgcactaagacaacgaaatcacgaaagaaaaacttaattcaatgtgaaaatcacttatttaaaca-aaagggaaggagaaaaacgatgtagaggggtgat 11817094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 21223447 - 21223518
Alignment:
Q  76 tcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||  |||||| ||  | ||| |||||||||||    
T  21223447 tcacttatttagaatgaaaga-aaggggaaaaaagatgcagagatgtgattttagattaaaaaatgacctaaa 21223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 31891451 - 31891490
Alignment:
Q  72 aaaatcacttatttagattgaaagagaaggggaaaaaagat 112  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  31891451 aaaatcacttatttagattgaaaga-aagggaaaaaaagat 31891490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 47158201 - 47158098
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||| ||||||| || || |||||||||||||| ||||||||| |  |  |||||||||| | | | |||||||||||| ||| ||||||     
T  47158201 cacaaaagaaaaaacttgatatatgtggaaatcacttatttaaattgaaagaaagtgaaaaaaaagatgcaaatgagtgattctaagt-aaaaaatgacg 47158103  T
Q  145 taaaa 149  Q
    |||||    
T  47158102 taaaa 47158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 8e-49; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 30756918 - 30757116
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||          ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  30756918 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacatgatagatgtgaaaatcacttatttagattgaaagaaaaggggaaaaa 30757017  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||| |||||| ||| |||        ||||||||||||||||||||||||    
T  30757018 agatgtagaggggtgattctaggtcaaaaaattacctaaaaccacccctcctcgatgaacgaaagagaaagaaaatttagagagaagttgaagtttctc 30757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 35132932 - 35132781
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    ||||||| |||||| |||||||||| |||| |||||||||||||||  || ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  35132932 cacaacgtcgcactaagacgacgaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattaaaaga-aaggggaaaaaagatgtagag 35132834  T
Q  119 gggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    ||||||||||| |||||| | |||||||||| |||||||||| ||||| ||||    
T  35132833 gggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaa 35132781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 12141442 - 12141608
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaag-gggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||| | ||  ||||||||||||||||||||||||||||| |||||| ||||||    
T  12141442 cacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaataaaaaagggaaaaaagatgtagaggggtgattctatgtcaaaaaatgac 12141541  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
    ||||||||||||||| | |||||| |||||||       |||||||||||||||| |||||||||||    
T  12141542 ctaaaaccacccctcttcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctctct 12141608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 46 - 210
Target Start/End: Complemental strand, 48061379 - 48061213
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaa-ggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||||| || |||||||||| |||||| ||||||||||||||||||| ||||||    
T  48061379 cacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaaggggaaaaaatatgtagtggggtgattctaagtcaaaaaatgac 48061280  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
    ||||||||||| ||||| |||||| ||||||        |||||||||||||||| |||||||||||    
T  48061279 ctaaaaccacctctcctcgatgaacgaaggataaagaaagtttagagagaagttggagtttctctct 48061213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 34899706 - 34899850
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||          |||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||    
T  34899706 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagggaaaaaa 34899805  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||    
T  34899806 agatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 34899850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 56 - 209
Target Start/End: Original strand, 9450283 - 9450436
Alignment:
Q  56 aaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccaccc 155  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| |||||| ||||||||||||||| ||    
T  9450283 aaactagatagatgtgaaaatcacttatttagattgaaagaaaaggggaaacaagatgtagatgggtgattctaggtcaaaaaatgacctaaaaccatcc 9450382  T
Q  156 ctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||| |||||| |||||||       ||||| | |||||||| ||||||||||    
T  9450383 ctcctcgatgaacgaaggagaaagaaagtttaaaaagaagttggagtttctctc 9450436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 37837594 - 37837757
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||| ||| ||| || || ||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| |||||||    
T  37837594 cacaaaagaaaaaacttaatatatgtgtaaaccacttatttagattgaaagaaaaggg-aaaaaagatgtagaggggtgattctaggtcaaaaaatgacc 37837692  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||||||||||||  ||||| |||||||       |||||||||||||||| ||||||||||    
T  37837693 taaaaccacccctcctcaatgaacgaaggagaaataaagtttagagagaagttggagtttctctc 37837757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 48316947 - 48317077
Alignment:
Q  46 cacaaaagaaaaactt-gatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||| || ||||||| |||||| |||||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||| || |||||||    
T  48316947 cacaaaagaaaaaatttgatagatgtgaaaaccacttatttaaattgaaagaaaagggggaaaaagatgtagaggggtgattctaggtccaaaaatgacc 48317046  T
Q  145 taaaaccacccctcctagatgaatgaaggag 175  Q
    |||||||||||||||| |||||| |||||||    
T  48317047 taaaaccacccctccttgatgaacgaaggag 48317077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 72 - 209
Target Start/End: Original strand, 8013627 - 8013764
Alignment:
Q  72 aaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||||||  ||    
T  8013627 aaaatcacttatttagactgaaagaaaagggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgatgaacaaa 8013726  T
Q  172 ggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    | ||       |||||||||||||||||||||||||||    
T  8013727 gaagaaagaaagtttagagagaagttgaagtttctctc 8013764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 42978602 - 42978400
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaa-----------aaacttgatagatatgaaaatcacttatttagattgaaagagaagggga-aa 106  Q
    ||||||||||||||||||||||||| |||||||||||           |||||| ||| || |||||| ||||||||||||||||  || ||||||| ||    
T  42978602 cacaacgccgcacttagacgacgaaatcacaaaagaacacaaaaggaaaaactttatatatgtgaaaaccacttatttagattgatcgaaaaggggagaa 42978503  T
Q  107 aaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttct 206  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||       |||||||||||||||  |||||||    
T  42978502 aaagatgtagagtggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttagagtttct 42978403  T
Q  207 ctc 209  Q
    |||    
T  42978402 ctc 42978400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 19296862 - 19296705
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||          |||||||||||||||| |||||        |||||||||||||| |||||||||||    
T  19296862 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaa--------tttagattgaaagaaaaggggaaaaa 19296771  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaagga 174  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||| ||||||    
T  19296770 agatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaagga 19296705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 19404859 - 19405053
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaa--------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatg 113  Q
    |||||||||||||||||||||| |||| |||        ||||||||||||  || |||||| |||||||||||||||||||| ||||  ||||||||||    
T  19404859 aacgccgcacttagacgacgaaatcactaaaatcaaaaggaaaaacttgatttatgtgaaaaccacttatttagattgaaagaaaagga-aaaaaagatg 19404957  T
Q  114 tagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||  |||||| ||||||        ||||||||||||||| ||||||||||    
T  19404958 tagaggggtgattctaggtcaaaaaatgacctaaaaccaccccttctcaatgaattaaggagaaagaagatttagagagaagttggagtttctctc 19405053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 13797031 - 13797230
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||| ||||          |||||||||||||||| | ||||||||||||||| ||||||||| |||||| ||||    
T  13797031 cacaacgccgcacttagacgacgaaatcataaaaaacacaaaaggaaaaacttgatagatgttaaaatcacttatttaaattgaaagaaaagggg-aaaa 13797129  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctct 208  Q
    ||||||||||||||||||||| || ||| ||||||||||||||| || |||| |||||| ||| |||        |||| ||||||||||||||||||||    
T  13797130 agatgtagaggggtgattctaggttaaaaaatgacctaaaaccatccatcctcgatgaacgaacgagaaagaaaatttaaagagaagttgaagtttctct 13797229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 53 - 172
Target Start/End: Original strand, 39171734 - 39171854
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaa-aagatgtagaggggtgattctaagtcaaagaatgacctaaaacc 151  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| || || |||| |||||||||||||||||||||| |||||| ||||||||| ||||    
T  39171734 gaaaaacttgatagatatgaaaaccacttatttagatcgaaagaaaaaggaaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctacaacc 39171833  T
Q  152 acccctcctagatgaatgaag 172  Q
    ||||||||| |||||| ||||    
T  39171834 acccctcctcgatgaacgaag 39171854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 1749253 - 1749402
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    ||||||| |||||| |||||||||| |||| |||||||||||||||  || ||||||||||||||||||||||||  |||| ||||||||||||| ||      
T  1749253 cacaacgtcgcactaagacgacgaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaa--agaaagggaaaaaagatgaag-c 1749349  T
Q  119 gggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    ||||||||||| |||||| | |||||||||| |||||||||| ||||| ||||    
T  1749350 gggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaa 1749402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 22742888 - 22742768
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||  | ||| | ||||||||||    
T  22742888 aaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aaggggaaaaaagatgcagaggggtgattctagattaaaaattgacctaaaa 22742790  T
Q  150 ccacccctcctagatgaatgaa 171  Q
     |||||||||| ||||||||||    
T  22742789 tcacccctcctcgatgaatgaa 22742768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 40993174 - 40992976
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaag-gggaaaa 107  Q
    ||||||||||||||||||||||||| ||||||||          |||||||||||||||| |||||| |||||||||||||||||||| ||| || ||||    
T  40993174 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagtggaaaaa 40993075  T
Q  108 aagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||||||| |||||| || |||||| ||||||||||||| | || |||| |||||| |||| ||       |||||||||||||||| ||||||||    
T  40993074 aagatgtagaggagtgattttaggtcaaaaaatgacctaaaacta-ccatcctcgatgaacgaagaagaactaaagtttagagagaagttggagtttctc 40992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 24770238 - 24770058
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaac--ttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtag 116  Q
    |||||| |||||||||||||||||| ||||||||||||||   |||||| || |||||| |||||||||||||||||||| |||   |||||||||||||    
T  24770238 cacaacaccgcacttagacgacgaaatcacaaaagaaaaaaatttgatatatgtgaaaaccacttatttagattgaaagaaaagaa-aaaaaagatgtag 24770140  T
Q  117 aggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttg 198  Q
    | || ||||||||||||| | |||||||||||| ||||||  || |||||| ||| |||       ||||||||||||||||    
T  24770139 atggatgattctaagtcataaaatgacctaaaatcaccccgtctcgatgaacgaatgagaaagaaagtttagagagaagttg 24770058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 24350984 - 24351099
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||  || ||||||||||||||||||||||||||| ||||| ||||| |||| | ||||||||||||| |||||| | ||||||||||    
T  24350984 aaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aagggaaaaaaggatgcacaggggtgattctaggtcaaaaattgacctaaaa 24351082  T
Q  150 ccacccctcctagatga 166  Q
     |||||||||| |||||    
T  24351083 tcacccctcctcgatga 24351099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 4530030 - 4529871
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    ||||||||| |||||| || ||||||  ||||| ||||||||||||| |  |||||||||||||||| ||| || ||||| |||||| ||||||||||||    
T  4530030 aaagaaaaatttgatatatgtgaaaaatacttacttagattgaaagaaagagggaaaaaagatgtagcgggatggttctatgtcaaaaaatgacctaaaa 4529931  T
Q  150 ccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
     |||| ||| | ||||||||||||||         ||||||||||| |||||||||||||    
T  4529930 tcacctctctttgatgaatgaaggagaaagaagacttagagagaaggtgaagtttctctc 4529871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 47590303 - 47590155
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||| ||||| ||||||||          ||||||||||||| || |||||| ||||||||||||||||||||  ||||  ||||    
T  47590303 cacaacgccgcacttagacaacgaaatcacaaaaaacacaaaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaagaataggg--aaaa 47590206  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcct 160  Q
    | |||||||||||||||||||  ||||| |||||||||||| ||||||||||    
T  47590205 aaatgtagaggggtgattctagttcaaa-aatgacctaaaatcacccctcct 47590155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 48930758 - 48930657
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    ||||||| |||||| |||||||||| |||  |||   |||||||||  || ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48930758 cacaacgtcgcactaagacgacgaaatcatgaaa---aaacttgatgtatgtgaaaatcacttatttagattgaaaga-aaggggaaaaaagatgtagag 48930663  T
Q  119 gggtga 124  Q
    ||||||    
T  48930662 gggtga 48930657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 28476175 - 28476064
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    |||||||||||||||||||  || ||||||||||||||||||||||||||| |||| ||||||| || | | |||||||||||| |||||| | ||||||    
T  28476175 cacaaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aaggagaaaaaa-atat-gcggggtgattctaggtcaaaaattgacct 28476079  T
Q  146 aaaaccacccctcct 160  Q
    |||| ||||||||||    
T  28476078 aaaatcacccctcct 28476064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 38798717 - 38798630
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    |||||| |||||||||| ||||||||| || || |||| ||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  38798717 tgaaaaccacttatttaaattgaaagaaaaagg-aaaagagatgtagatgggtgattctatgtcaaagaatgacctaaaaccatccctc 38798630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 5078531 - 5078643
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    |||||||||||||||||||| || | |||||||||||||||||| |||| |  | ||  | ||||||| ||||||||||||||| |||||| ||||||||    
T  5078531 cacaaaagaaaaacttgatatatgtaaaaatcacttatttagatcgaaata--atggagagaaagatgcagaggggtgattctaggtcaaaaaatgacct 5078628  T
Q  146 aaaaccacccctcct 160  Q
    |||| ||||| ||||    
T  5078629 aaaatcacccttcct 5078643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 45349963 - 45350051
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcc 159  Q
    |||||| |||||||||| ||||||||| || || |||||||| ||||| ||||||||||| |||||| ||||||||||||||| ||||||    
T  45349963 tgaaaaccacttatttaaattgaaagaaaaagg-aaaaaagaagtagatgggtgattctaggtcaaaaaatgacctaaaaccaaccctcc 45350051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 38051207 - 38051316
Alignment:
Q  49 aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    |||| |||||||||||| ||||  ||| ||| |||||||||| ||||| ||||||||||  |||||||| ||||||||||| || |||  ||||||||||    
T  38051207 aaaaaaaaaacttgatatatattgaaaccacatatttagattaaaaga-aaggggaaaat-gatgtagatgggtgattctaggttaaaatatgacctaaa 38051304  T
Q  149 accacccctcct 160  Q
    ||||||||||||    
T  38051305 accacccctcct 38051316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 5348732 - 5348848
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||| |  | ||||||||||||||||| ||||||||| ||  |||||||||||   |||||||||||||| |||||| | | |||||||| ||    
T  5348732 gaaaaacttgaaacgtgtgaaaatcacttatttaaattgaaagaaaa--ggaaaaaagat---gaggggtgattctaggtcaaaaacttacctaaaa-ca 5348825  T
Q  153 cccctcctagatgaatgaaggag 175  Q
    || ||||| ||||||| ||||||    
T  5348826 cctctcctcgatgaataaaggag 5348848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 25255159 - 25255084
Alignment:
Q  78 acttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccaccc 155  Q
    ||||||||| ||||||||| ||||||||||| |||| | |||||||||| || |||||| ||||||||||||||||||    
T  25255159 acttatttaaattgaaaga-aaggggaaaaa-gatgcaaaggggtgattataggtcaaaaaatgacctaaaaccaccc 25255084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 46700019 - 46699931
Alignment:
Q  27 cgcacttagacgacgaagtcacaaaag-aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgta 115  Q
    ||||| |||||||| || ||||||||| |||||||||||| || || ||| |||||||||||| ||||||| ||||||||||| ||||||    
T  46700019 cgcacctagacgacaaactcacaaaaggaaaaacttgatacatgtggaaaccacttatttagaatgaaaga-aaggggaaaaatgatgta 46699931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 8001648 - 8001703
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaa-gaaaaacttgatagatatgaaaat 76  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||| |||||||    
T  8001648 aacgccgcacttagacgacgaaatcacaaaaggaacaacttgatagatgtgaaaat 8001703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 175
Target Start/End: Original strand, 25287325 - 25287446
Alignment:
Q  49 aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    ||||||||||||| ||| |  ||||||||||||||||||||| ||||| ||  || ||||||||||| |||| ||||     |||||| ||| || ||||    
T  25287325 aaaagaaaaacttaatatacgtgaaaatcacttatttagattaaaagaaaaaagggaaaaagatgtaaagggatgat-----gtcaaataataacttaaa 25287419  T
Q  149 accacccctcctagatgaatgaaggag 175  Q
    |||||| ||| | || |||||||||||    
T  25287420 accacctctcttcgacgaatgaaggag 25287446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 26583676 - 26583583
Alignment:
Q  62 gatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    |||| |||||||||||||||||||||||||||| |||   |  ||||||||| ||||||||||||  | |||||  | ||||| |||||||||||||    
T  26583676 gatatatatgaaaatcacttatttagattgaaataga---gataaaaagatgaagaggggtgatttcaggtcaagaattgaccaaaaaccacccctc 26583583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 39328937 - 39329050
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagt-caaagaatgacctaaaacca 152  Q
    ||||||||||||  | |||||| |||||||||| ||||||||| || ||||||||||||| ||| |||| |||||| ||  ||| || |||||||| |||    
T  39328937 aaaaacttgatatgtgtgaaaaccacttatttaaattgaaaga-aaagggaaaaaagatgcagatgggtaattctaggtaaaaaaaaagacctaaaccca 39329035  T
Q  153 cccctcctagatgaa 167  Q
    | |||||| ||||||    
T  39329036 ctcctcctcgatgaa 39329050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 11343726 - 11343635
Alignment:
Q  72 aaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatga 166  Q
    ||||||||||||||||||||||  ||||  |||||||| ||| | ||||||||||||| |||||| ||| | |||||| ||||||| || |||||    
T  11343726 aaaatcacttatttagattgaa--agaaatggaaaaaaaatgca-aggggtgattctaggtcaaaaaataaactaaaatcaccccttctcgatga 11343635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 1769345 - 1769428
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    |||||||||| ||||||||  |||||| |||||||||||| ||| | | |||||||||| | | ||| |||||| ||||||||||    
T  1769345 tgaaaatcacatatttagaacgaaaga-aaggggaaaaaaaatgcaaaagggtgattcttatttaaaaaatgacgtaaaaccacc 1769428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 5775160 - 5775084
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa-agatgtagaggggtgattcta 129  Q
    |||||||||||| || || |||||||||||||| ||  ||||| | |||| |||| ||||| |||||||||||||||    
T  5775160 aaaaacttgatatatgtggaaatcacttatttatatcaaaagaaaggggggaaaatagatggagaggggtgattcta 5775084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 5792728 - 5792672
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgatt 126  Q
    |||||| || || |||||| ||||||| ||| | |||||||||||||||||||||||    
T  5792728 tgaaaaccatttttttagaatgaaagaaaagagaaaaaaagatgtagaggggtgatt 5792672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 26610890 - 26610987
Alignment:
Q  55 aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    ||||||||||| || || ||| |||||||||| ||| ||||| |||||| ||||||||| | | |||||||| || |||||| ||| |||||||||||||    
T  26610890 aaaacttgatatatgtggaaaccacttatttaaattcaaaga-aagggg-aaaaagatgcataagggtgattttaggtcaaa-aataacctaaaaccacc 26610986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 27997029 - 27996954
Alignment:
Q  60 ttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaa 136  Q
    |||||| || ||||||||  ||||||||||||||||| ||||  ||||||||||||||   ||||||||| ||||||    
T  27997029 ttgatatatgtgaaaatctattatttagattgaaaga-aaggaaaaaaaagatgtagataagtgattctaggtcaaa 27996954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 35665295 - 35665358
Alignment:
Q  73 aaatcacttatttagattgaaagagaaggggaaa-aaagatgtagaggggtgattctaagtcaaa 136  Q
    ||||||||||||||||| |||||| ||| | ||| ||||||| ||||||||||||||| ||||||    
T  35665295 aaatcacttatttagatcgaaaga-aagagaaaataaagatgcagaggggtgattctaggtcaaa 35665358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 43098704 - 43098618
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||| |||||||||| |||| ||| ||| |||  |||||| ||||| ||||||||||| | |||||| ||||| ||||||    
T  43098704 acaacgccgcactaagacgacgaaatcacgaaa-aaatactaaatagatgtgaaattcacttattta-aatgaaagtgaaggagaaaaa 43098618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 15437 - 15282
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  15437 gaaaaacttgaaagatatgaaaaccacttatttagattgaaagaaaaggggaaaaa-gatgtagaggggtgattctaggtcaaaaaatgacctaaaacca 15339  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||| || ||| |||||||       |||||||||||||||||||||||||||    
T  15338 cccctcctcgaagaacgaaggagaaagaaagtttagagagaagttgaagtttctctc 15282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 13007218 - 13007020
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||          |||||||||||||||| |||||| |||||||||||||||||||| || ||||||||    
T  13007218 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaatgggaaaaa 13007119  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    || |||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||| |||||||       |||||||||||||||| ||||||||    
T  13007118 aggtgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 13007020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 38597786 - 38597587
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||||||||||||||| |||||||||  |||| |||||    
T  38597786 cacaacgccgcacttagacgacgaaatcacaaaaagcacaaaaggaaaaacttgatagatgtgaaaatcacttatttaaattgaaagaataggg-aaaaa 38597688  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctct 208  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||| |||||| |||||||       |||||||||||||||| |||||||||    
T  38597687 agatgtagaggggtgattctaggtcaaaaaataacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctct 38597588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 53 - 207
Target Start/End: Original strand, 6012281 - 6012435
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||  |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  6012281 gaaaaacttgatagacgtgaaaaacacttatttagattgaaagaaaagggaaaaaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaacca 6012380  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||  ||||| |||||||       |||||||||||||||| ||||||||    
T  6012381 cccctcctcaatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 6012435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 7036204 - 7036017
Alignment:
Q  23 acgccgcacttagacgacgaagtcacaaaagaaaaac-ttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagagggg 121  Q
    |||||||| | |||||||||| ||||||||||||||  |||||| || |||||| |||||||||||||||||||| ||| |||||||||||||||| | |    
T  7036204 acgccgcaatcagacgacgaaatcacaaaagaaaaaaattgatatatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagatgag 7036105  T
Q  122 tgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||| || |||||| ||||||||||||||||||| ||| ||||||||||||||       |||||||||||||||  ||||||||||    
T  7036104 tgattttaggtcaaaaaatgacctaaaaccaccccaccttgatgaatgaaggagaaagaaagtttagagagaagtttgagtttctctc 7036017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 53 - 207
Target Start/End: Complemental strand, 34945367 - 34945213
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  34945367 gaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaagggtgattctaggtcaaaaaatgacctaaaacca 34945268  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
     || || | |||||| |||||||       |||||||||||| ||| ||||||||    
T  34945267 tccttcttcgatgaacgaaggagaaagaaagtttagagagaatttggagtttctc 34945213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 9113827 - 9114022
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaaga 111  Q
    |||||||||||||||||||||| ||||||||          |||||||||||||||| |||||| |||||||||||||| ||||| || |||||||||||    
T  9113827 aacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattaaaagaaaatgggaaaaaaga 9113926  T
Q  112 tgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||||||||||||| || ||| |||||||||||| |||||||||| |||||| ||| |||       |||||||||||||||  ||||||||    
T  9113927 tgtagaggggtgattctaggttaaaaaatgacctaaaatcacccctcctcgatgaacgaaagagaaagaaagtttagagagaagttagagtttctc 9114022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 26825419 - 26825220
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa---------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa 109  Q
    |||||||||||||||||| |||||| ||||||||         |||||||||||||||  |||||| |||||||||||||||||||| ||||||||||||    
T  26825419 cacaacgccgcacttagaagacgaaatcacaaaaacacaaaaggaaaaacttgatagacgtgaaaaccacttatttagattgaaagaaaaggggaaaaaa 26825320  T
Q  110 gatgtagaggggtgattctaagtc--aaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||| |||||||||| |||  ||| || |||||||||||||||||||| |||||| |||||||       |||||||||||| ||| ||||||||    
T  26825319 gatgtagagtggtgattctaggtccaaaaaaaagacctaaaaccacccctcctcgatgaaagaaggagaaagaaagtttagagagaaattggagtttctc 26825220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 26878223 - 26878377
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    |||||||||||  || |||||| |||||||||||||||||||| |||||| |||||||||||||| ||||||||||  ||||| |||||| |||||||||    
T  26878223 aaaaacttgatttatgtgaaaaccacttatttagattgaaagaaaagggggaaaaagatgtagagaggtgattctagatcaaa-aatgacataaaaccac 26878321  T
Q  154 ccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    | ||||| ||||||||||||||       |||||||||||||||||||||||||||    
T  26878322 ctctcctcgatgaatgaaggagaaagaaagtttagagagaagttgaagtttctctc 26878377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 53 - 197
Target Start/End: Original strand, 31391899 - 31392044
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaagggga-aaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacc 151  Q
    ||||||||||||| || |||||| ||||||||||||||||  || ||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  31391899 gaaaaacttgataaatgtgaaaaccacttatttagattgatcgaaaaggggagaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaacc 31391998  T
Q  152 acccctcctagatgaatgaaggagnnnnnnngtttagagagaagtt 197  Q
    ||||||||| |||||| || ||||       |||||||||||||||    
T  31391999 acccctcctcgatgaacgatggagaaagaaagtttagagagaagtt 31392044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 38007300 - 38007147
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    ||||||||||||  | |||||| |||||||||| ||||||||| |||||  ||||||||||||||||||||||| | |||||| ||||||||||||||||    
T  38007300 aaaaacttgatatgtgtgaaaaccacttatttaaattgaaagaaaaggg--aaaaagatgtagaggggtgattcgaggtcaaaaaatgacctaaaaccac 38007203  T
Q  154 ccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||||| |||||| |||||||       ||||||||||||| |  ||||||||||    
T  38007202 ccctcctcgatgaacgaaggagaaagaaagtttagagagaagattgagtttctctc 38007147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 2979453 - 2979573
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||  || ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| || |||||| | ||||||||||    
T  2979453 aaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aagaggaaaaaagatgcagaggggtgattataggtcaaaaattgacctaaaa 2979551  T
Q  150 ccacccctcctagatgaatgaa 171  Q
     |||||||||| ||||| ||||    
T  2979552 tcacccctcctcgatgagtgaa 2979573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 39567243 - 39567123
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||  || ||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||| |||||| | ||||||||||    
T  39567243 aaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aagggggaaaaagatgcagaggcgtgattctaggtcaaaaattgacctaaaa 39567145  T
Q  150 ccacccctcctagatgaatgaa 171  Q
     |||||||||| ||||| ||||    
T  39567144 tcacccctcctcgatgagtgaa 39567123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 155
Target Start/End: Complemental strand, 14211201 - 14211076
Alignment:
Q  27 cgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgatt 126  Q
    |||||| |||||||||| |||| ||| |||||||||||  || ||||||||||||||||||||||||||| |||||  ||||||||| ||||||||||||    
T  14211201 cgcactaagacgacgaaatcacgaaataaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aaggg--aaaaagatgcagaggggtgatt 14211105  T
Q  127 ctaagtcaaagaatgacctaaaaccaccc 155  Q
    ||| |||||| | |||||||||| |||||    
T  14211104 ctaggtcaaaaattgacctaaaatcaccc 14211076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 25980103 - 25979951
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||| ||||||| | |||| ||||||||||| ||||||   |||||||||||||||||||| |||| |||| | |||||| |||||||| ||||||    
T  25980103 gaaaaactcgatagatgttaaaaccacttatttaggttgaaaacaaaggggaaaaaagatgtagaagggtaattccaggtcaaaaaatgacctgaaacca 25980004  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttc 205  Q
    ||| |||| |||||| |||||||       |||||||||||||||| ||||||    
T  25980003 cccatcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttc 25979951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 10722718 - 10722603
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtaga-ggggtgattctaagtc-aaagaatgacctaaaacc 151  Q
    ||||||||| || || |||||| |||||||||||||||||||| ||| |||||||||||||||| |||||||||||| ||| ||| ||||||||||||||    
T  10722718 aaaaacttgttacatgtgaaaaacacttatttagattgaaaga-aagaggaaaaaagatgtagagggggtgattctaggtcaaaaaaatgacctaaaacc 10722620  T
Q  152 acccctcctagatgaat 168  Q
    ||| ||||| |||||||    
T  10722619 acctctcctcgatgaat 10722603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 11074043 - 11074199
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| |||||  |||||||||||||| ||||| ||||| |||||||| |||||| | |||||||| |||||| ||| |||||||||||    
T  11074043 gaaaaacttgatagatgtgaaagccacttatttagattaaaagaaaagggaaaaaaagacgtagagtgatgattctaggtcaaa-aataacctaaaacca 11074141  T
Q  153 ccc-ctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||| ||||| |||||| || ||||       ||||||||| |||||| ||||||||||    
T  11074142 ccctctcctcgatgaacgagggagaaagaaagtttagagaaaagttggagtttctctc 11074199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 152
Target Start/End: Original strand, 8096633 - 8096738
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || |||||| |||||||||||||||||||| || |||||||||||  |||||||||||||||| |||||| |||||||    
T  8096633 cacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaaga-aaagggaaaaaagaaatagaggggtgattctaggtcaaa-aatgacc 8096730  T
Q  145 taaaacca 152  Q
    ||||||||    
T  8096731 taaaacca 8096738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 53 - 197
Target Start/End: Complemental strand, 6216844 - 6216696
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagaga----aggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    ||||||||||||| || |||||| |||||||||||||||||||| |    ||||||||| | ||||||| || ||||| || ||||||||||||||||||    
T  6216844 gaaaaacttgatatatgtgaaaaccacttatttagattgaaagaaagcaaaggggaaaacaaatgtagatggatgattttaggtcaaagaatgacctaaa 6216745  T
Q  149 accacccctcctagatgaatgaaggagnnnnnnngtttagagagaagtt 197  Q
    ||||||| |||| |||||| ||| |||       |||||||||||||||    
T  6216744 accacccatcctcgatgaacgaatgagaaataaagtttagagagaagtt 6216696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 13421912 - 13421792
Alignment:
Q  29 cacttagacgacgaagtcacaaaa-gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattc 127  Q
    |||||||||||  || |||||||| ||||||||| ||| ||  ||||| |||||||||||||| ||||| |||||| ||||||||||||| |||||||||    
T  13421912 cacttagacgaaaaaatcacaaaaagaaaaactttatatatgggaaaaccacttatttagattaaaagaaaagggggaaaaagatgtaga-gggtgattc 13421814  T
Q  128 taagtcaaagaatgacctaaaa 149  Q
    || |||||| ||||||||||||    
T  13421813 tatgtcaaaaaatgacctaaaa 13421792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 10332687 - 10332798
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaag-gggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||||| |||    |||||||||| ||||| |||||||||| ||||| ||||||    
T  10332687 cacaaaagaaaacacttgatatatatggaaatcacttatttagattgaaagaaaagataaaaaaaagatgcagaggtgtgattctaaatcaaaaaatgac 10332786  T
Q  144 ctaaaaccaccc 155  Q
     |||||||||||    
T  10332787 ttaaaaccaccc 10332798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 166
Target Start/End: Original strand, 14082472 - 14082627
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa-------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaaga 111  Q
    ||||||||| ||||||||||| ||| ||||||||       ||||||||||||| || |||||  |||||||||||||||||| | ||||  |||||| |    
T  14082472 cacaacgccacacttagacgatgaaatcacaaaaaatataagaaaaacttgatatatgtgaaagccacttatttagattgaaataaaaggaaaaaaaata 14082571  T
Q  112 tgtaga-ggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatga 166  Q
    |||||| |||||||||| |||||||| |||||| |||||||||  ||||| |||||    
T  14082572 tgtagagggggtgattcaaagtcaaaaaatgacataaaaccacttctcctcgatga 14082627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 24229920 - 24230000
Alignment:
Q  46 cacaaaagaaa-aacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgatt 126  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||    
T  24229920 cacaaaagaaacaacttgatagatgtgaaaatcacttatttagattgaaagaaaaaggg-aaaaatatgtagaggggtgatt 24230000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 11977072 - 11977236
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagt-caaagaatgac 143  Q
    |||||||||||| |||||||| || |||||| |||||||||||||||||||| || |||||||||||||| ||||  |||||||| ||  ||| ||  |     
T  11977072 cacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaaga-aaagggaaaaaagatgtcgaggtttgattctaggtaaaaaaaaaaat 11977170  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||||||| || |||||| |||||||       |||||||||||||||  ||||||||||    
T  11977171 ctaaaaccaccccttctcgatgaacgaaggagaaagaaagtttagagagaagttagagtttctctc 11977236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 15571475 - 15571309
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||| ||||||||||||||| ||||||||          ||||||||||||| || |||||| |||||||||||||||||||| || | ||||||    
T  15571475 cacaacgccacacttagacgacgaaatcacaaaaattacaaaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaaga-aatgagaaaaa 15571377  T
Q  109 agatgtagaggggtgattctaagtc-aaagaatgacctaaaaccacccctcctagatgaatgaaggag 175  Q
    |||||| || || |||||||| ||| ||| |||||| ||||||||   ||||| ||||||||||||||    
T  15571376 agatgttgatggatgattctaggtcaaaaaaatgacataaaaccatttctcctcgatgaatgaaggag 15571309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 19103614 - 19103691
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattct 128  Q
    |||||||||||||||  || |||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||||    
T  19103614 aaagaaaaacttgatgtatgtgaaaatcacttatttagatcgaaaga-aaggggaaaaaagatgctgaggggtgattct 19103691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 28541053 - 28541167
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||| |||||      |||| |||||| | ||||||||||    
T  28541053 aaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aaggggaaaaaagatgcagagg------tctaggtcaaaaattgacctaaaa 28541145  T
Q  150 ccacccctcctagatgaatgaa 171  Q
     |||||| ||| ||||| ||||    
T  28541146 tcaccccacctcgatgagtgaa 28541167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 154
Target Start/End: Complemental strand, 41630451 - 41630350
Alignment:
Q  49 aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    ||||||||||||| |||||| ||||||   |||||||||||||||||| | |||  ||||||||||||| | ||||||||| |||||| |||||||||||    
T  41630451 aaaagaaaaactttatagatgtgaaaacggcttatttagattgaaagaaatggg--aaaaagatgtaga-gagtgattctaggtcaaa-aatgacctaaa 41630356  T
Q  149 accacc 154  Q
    ||||||    
T  41630355 accacc 41630350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 88 - 210
Target Start/End: Complemental strand, 35850694 - 35850573
Alignment:
Q  88 attgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngttta 187  Q
    ||||||||| ||||| |||||| ||||||| ||||||||||| |||||| || |||||||||||||||||||| ||| || ||| |||       |||||    
T  35850694 attgaaagaaaagggaaaaaaatatgtagatgggtgattctaggtcaaa-aaagacctaaaaccacccctcctcgataaacgaatgagaaataaagttta 35850596  T
Q  188 gagagaagttgaagtttctctct 210  Q
    ||||||| ||| | |||||||||    
T  35850595 gagagaaattggactttctctct 35850573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 136
Target Start/End: Original strand, 14726606 - 14726689
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaag-agaaggggaaaaaagatgtagaggggtgattctaagtcaaa 136  Q
    |||||||||||| ||||||||| |||||| |||||||||||| | ||| | |||||||||||| | ||||||||||| ||||||    
T  14726606 aaaaacttgatatatatgaaaaccacttagttagattgaaagaaaaagagaaaaaaagatgtaaatgggtgattctaggtcaaa 14726689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 28235542 - 28235457
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    |||||||||||||||||||| |||| |||| |   ||||||||| ||||||||||||  | ||||| || ||||| |||||||||||||    
T  28235542 tgaaaatcacttatttagatcgaaatagaaag---aaaaagatgaagaggggtgatttcaggtcaatgattgacccaaaaccacccctc 28235457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 7930139 - 7930026
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggg-gaaaaaa-gatgtagaggggtgattctaagtcaaagaatgacctaaaacc 151  Q
    |||||||||||| || |||||| |||||  ||||||| ||||| ||| | || |||| |||| | ||||||||||||| |||||| | |||||||||| |    
T  7930139 aaaaacttgatatatgtgaaaaccactt--ttagattaaaagaaaagagagagaaaatgatgcacaggggtgattctaggtcaaaaattgacctaaaatc 7930042  T
Q  152 acccctcctagatgaa 167  Q
    ||||||||| ||||||    
T  7930041 acccctccttgatgaa 7930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 8088373 - 8088458
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccct 157  Q
    |||||||||||||||||||| |||  |||| | ||||||||||| |||| ||||| |  | |||||||||||| |||||| |||||||    
T  8088373 tgaaaatcacttatttagatcgaa--agaaagagaaaaaagatgcagagaggtgacttcaggtcaaagaatgatctaaaatcacccct 8088458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 42579837 - 42579749
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    ||||||||||||||||||||||||| |||| |  |||||| ||| | ||||||||||  | |||||  | ||||| |||||||||||||    
T  42579837 tgaaaatcacttatttagattgaaatagaaagaaaaaaaaaatgaaaaggggtgatttcatgtcaataattgacccaaaaccacccctc 42579749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 155
Target Start/End: Complemental strand, 11867590 - 11867524
Alignment:
Q  88 attgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccaccc 155  Q
    ||||||||| |||  |||||||||||||||| ||||||| || |||||| ||||||||||||| ||||    
T  11867590 attgaaagaaaagatgaaaaaagatgtagagtggtgattttaggtcaaa-aatgacctaaaactaccc 11867524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 28386924 - 28386885
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaa 58  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  28386924 cacaacgccgcacttagacgacgaaatcacaaaaaaaaaa 28386885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 71963 - 72161
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||||||||          |||||||||||||||| |||||| ||||||||| |||||||||| |||||| ||||    
T  71963 cacaacgccgcacttagacgacgaaatcacaaaaaacacaaatggaaaaacttgatagatgtgaaaaccacttatttggattgaaagaaaagggggaaaa 72062  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||| |||  |||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||       |||||||||||||||||||||||||    
T  72063 agatgaagaatggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttgaagtttctc 72161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 53 - 207
Target Start/End: Complemental strand, 4778709 - 4778555
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| |||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  4778709 gaaaaacttgatagatgtgaaaaccacttatttaaattgaaagaaaagggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaacca 4778610  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||| |||||| |||||||       ||||||| |||||||| ||||||||    
T  4778609 cccctcctcgatgaacgaaggagaaagaaagtttagaaagaagttggagtttctc 4778555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 9169358 - 9169554
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa---------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa 109  Q
    ||||||||||||||||||||||||| ||||||||         |||||||||||||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  9169358 cacaacgccgcacttagacgacgaaatcacaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagggaaaaaaa 9169457  T
Q  110 gatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
     ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| || ||| |||       |||||||||||||||| ||||||||    
T  9169458 aatgtagaggggtgattctaggtcaaa-aatgacctaaaaccacccctcctcgataaacgaatgagaaagaaagtttagagagaagttggagtttctc 9169554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 4099103 - 4098905
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| | ||||||          |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  4099103 cacaacgccgcacttagacgacgaaattacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaa 4099004  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||| ||||||||||| |||||| ||||||||||| |||||| |||| |||||| ||| |||       |||||||||||||||| ||||||||    
T  4099003 agatgtagatgggtgattctaggtcaaaaaatgacctaaagccacccttcctcgatgaaggaaagagaaagaaagtttagagagaagttggagtttctc 4098905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 53 - 207
Target Start/End: Complemental strand, 7646429 - 7646274
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa-gatgtagaggggtgattctaagtcaaagaatgacctaaaacc 151  Q
    |||||||||| ||||| |||||| ||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  7646429 gaaaaacttggtagatgtgaaaaccacttatttagatcgaaagaaaaggggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaacc 7646330  T
Q  152 acccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    ||||||||| |||||| |||||||       |||||||||||||||| ||||||||    
T  7646329 acccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttctc 7646274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 10237323 - 10237474
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    ||||||| |||||| |||||||||| |||| |||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10237323 cacaacgtcgcactaagacgacgaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aaggggaaaaaagatgtagag 10237421  T
Q  119 gggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    ||||||||||| |||||| | |||||||||| |||| || || ||||| ||||    
T  10237422 gggtgattctaggtcaaaaattgacctaaaatcacctctactcgatgagtgaa 10237474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 31788408 - 31788256
Alignment:
Q  57 aacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccc 156  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| ||| |||||||||| || |    
T  31788408 aacttgatagatgtgaaaatcacttatttagattgaaagaaaatgggaaaaaagatgtagaggggtgattctaggtcaaaaaattacctaaaaccgcctc 31788309  T
Q  157 tcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||| |||||| |||| ||       |||||||||||||||| ||||||||||    
T  31788308 tcctcgatgaacgaagaagaaagaaagtttagagagaagttggagtttctctc 31788256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 7448247 - 7448050
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||| ||||| ||||||||          |||||||||||||||| |||||| || ||||||||||||||||| |||||||||||    
T  7448247 cacaacgccgcacttagacaacgaaatcacaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccatttatttagattgaaagaaaaggggaaaaa 7448148  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
     |||||||||||||||||||| | |||| ||||||||||||||||||||||| |||||| ||||||        |||||||||||||||| ||||||||    
T  7448147 -gatgtagaggggtgattctaggacaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaaaaagaaagtttagagagaagttggagtttctc 7448050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 36943261 - 36943423
Alignment:
Q  47 acaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgaccta 146  Q
    |||||| ||||||||||||||| ||||||  ||||||||||||||||||| ||| ||||||||||||||||| |||||||||| |||||| |||||||||    
T  36943261 acaaaaaaaaaacttgatagatgtgaaaactacttatttagattgaaagaaaagaggaaaaaagatgtagagtggtgattctaggtcaaaaaatgaccta 36943360  T
Q  147 aaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||||||| ||| || |||||||       ||||||||| || ||| ||||||||||    
T  36943361 aaaccacccctcctcgatcaacgaaggagaaagaaagtttagagataaattggagtttctctc 36943423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 37876709 - 37876886
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaagaaaaactt-gatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggg 120  Q
    ||||||||||||||||||| || |||||||||||||| || ||||||| |||||| |||||||||||||| ||||| || ||| ||||||||||| | ||    
T  37876709 aacgccgcacttagacgaccaaatcacaaaagaaaaaatttgatagatgtgaaaaccacttatttagattaaaagaaaaaggggaaaaagatgtacaagg 37876808  T
Q  121 gtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttg 198  Q
    ||||||||| |||||| | ||||||||||||||||||||| |||||| |||| ||       ||||||||||||||||    
T  37876809 gtgattctaggtcaaaaattgacctaaaaccacccctcctcgatgaacgaagaagaaagaaagtttagagagaagttg 37876886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 27097506 - 27097701
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| ||| ||||          |||||||||||||| | ||||| ||||||||||||||  ||||| |||||||||||    
T  27097506 cacaacgccgcacttagacgacgaaatcagaaaaaacacaaaaggaaaaacttgatagttgtgaaa-tcacttatttagatcaaaagaaaaggggaaaaa 27097604  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttct 206  Q
    |||||||||||| |||||||| |||||| |||||||||||| |||||||||| |||||| |||||||       |||||||||||||||| |||||||    
T  27097605 agatgtagaggg-tgattctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaagtttagagagaagttggagtttct 27097701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 18763430 - 18763268
Alignment:
Q  46 cacaaaaga-aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||| ||||||||||  || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| ||||||     
T  18763430 cacaaaagagaaaacttgatc-atgtgaaaaccacttatttagattgaaagaaaaggg-aaaaaagatgtagaggggtgattctaggtcaaaaaatgaca 18763333  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||| ||||| |||| ||||||| |       |||||||||||||||| ||||||||||    
T  18763332 taaaaccacctctcctcgatggatgaaggtgaaagaaagtttagagagaagttggagtttctctc 18763268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 60 - 209
Target Start/End: Complemental strand, 1421624 - 1421471
Alignment:
Q  60 ttgatagatatgaaaatcacttatttagattgaaagagaagggg---aaaaaagatgtagaggggtgattctaagtc-aaagaatgacctaaaaccaccc 155  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||   ||||||||||||||||||||||||||  || ||| ||||||||||||||||||    
T  1421624 ttgatagatgtgaaaaccacttatttagattgaaagaaaagggggaaaaaaaagatgtagaggggtgattctatatcaaaaaaatgacctaaaaccaccc 1421525  T
Q  156 ctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    ||||| |||||| |||||||       |||||| ||||||||| ||||||||||    
T  1421524 ctcctcgatgaacgaaggagaaagaaagtttagcgagaagttggagtttctctc 1421471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 38445130 - 38445001
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||| |||||||||| |||||| |||||||||| ||||||||| || |||||||||||||||||||||||||||||  ||||| |||||||    
T  38445130 cacaaaagaaaaaacttgatagatgtgaaaaccacttatttatattgaaagaaaaagggaaaaaagatgtagaggggtgattctagatcaaa-aatgacc 38445032  T
Q  145 taaaaccacccctcctagatgaatgaaggag 175  Q
    |||||||||| ||| | |||||| |||||||    
T  38445031 taaaaccacctctcatcgatgaacgaaggag 38445001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 7677973 - 7678177
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggg------ 102  Q
    ||||||||||||||||||||||||| ||||||||          ||||||||  |||||| |||||| |||||||||||||||||||| |||||          
T  7677973 cacaacgccgcacttagacgacgaaatcacaaaaaactcaaaaggaaaaact--atagatgtgaaaaccacttatttagattgaaagaaaagggagaaaa 7678070  T
Q  103 gaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagt 202  Q
     |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | ||| || |||||||       |||||||||||||||| |||    
T  7678071 aaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcatcgatcaacgaaggagaaagaaagtttagagagaagttggagt 7678170  T
Q  203 ttctctc 209  Q
    |||||||    
T  7678171 ttctctc 7678177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 43397256 - 43397381
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||||||| ||||||| || |||||| |||||||||||||||||||| |||||  |||||||||||||| |||||||||| |||||| |||||||    
T  43397256 cacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaagaaaaggg--aaaaagatgtagagaggtgattctaggtcaaaaaatgacc 43397353  T
Q  145 taaaaccacccctcctagatgaatgaag 172  Q
    ||||||||||||| || |||||| ||||    
T  43397354 taaaaccaccccttctcgatgaacgaag 43397381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 11985366 - 11985529
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || |||||| |||||||||| ||||||||| |||||| |||||| |||||||||||||||||| || ||| ||||||     
T  11985366 cacaaaagaaaaaacttgatatatgtgaaaaccacttatttaaattgaaagaaaagggg-aaaaagttgtagaggggtgattctaggttaaaaaatgact 11985464  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||| ||||| || ||||||| |||       |||||||||||||||| ||||||||||    
T  11985465 taaaaccaccactcctcgaagaatgaaagagaaagaaagtttagagagaagttggagtttctctc 11985529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 12648060 - 12648174
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||||| ||| | ||||||||||| |||||||||||||| |||||| |||||||    
T  12648060 cacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaagaaaagag-aaaaaagatgtggaggggtgattctaggtcaaaaaatgacc 12648158  T
Q  145 taaaaccacccctcct 160  Q
    ||||||||||||||||    
T  12648159 taaaaccacccctcct 12648174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 1415557 - 1415419
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaa---cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgta 115  Q
    ||||||| || |||||||||||||| |||||||| |||||   |||||||  | ||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  1415557 cacaacgtcgtacttagacgacgaaatcacaaaaaaaaaaaatcttgatatgtgtgaaaatcacttatttaaattgaaagaaaaggg-aaaaaagatgta 1415459  T
Q  116 gaggggtgattctaagtcaaagaatgacctaaaaccaccc 155  Q
    ||||||||||||||  ||||| ||| ||||||||||||||    
T  1415458 gaggggtgattctagatcaaaaaataacctaaaaccaccc 1415419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 4041738 - 4041842
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| |||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||| ||||||| |||| | |||||||    
T  4041738 gaaaaacttgatagatgtgaaaaccacttatttagattgaaaga-aacgggaaaaaaaatgtagaggggtgattctaggtcaaagtatgatccaaaacca 4041836  T
Q  153 cccctc 158  Q
    ||||||    
T  4041837 cccctc 4041842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 3308897 - 3308788
Alignment:
Q  50 aaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaa 149  Q
    |||||||||||||||  || ||||||||||||||||||||||||| | |||||||||||||||| | ||||||||||||| |||||| | ||||||||||    
T  3308897 aaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaata-aaggggaaaaaagatgcaaaggggtgattctaggtcaaaaattgacctaaaa 3308799  T
Q  150 ccacccctcct 160  Q
     ||||||||||    
T  3308798 tcacccctcct 3308788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 53 - 155
Target Start/End: Original strand, 19062496 - 19062597
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| |||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||||  ||||| ||| |||||||||||    
T  19062496 gaaaaacttgatagatgtgaaaaccacttatttagattgaaaga-aaagggaaaaaggatgtagaggggtgattctagttcaaaaaataacctaaaacca 19062594  T
Q  153 ccc 155  Q
    |||    
T  19062595 ccc 19062597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 5428003 - 5428168
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaa-ggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||||||| |||||||||| ||||||  ||||||||||||||||||| || ||||||||||||||||||  | ||| |||| |||||| | | ||    
T  5428003 cacaaaagaaaaaacttgatagatgtgaaaaa-acttatttagattgaaagaaaaaggggaaaaaagatgtagaacgatgactctaggtcaaaaattaac 5428101  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
    ||||||||||||||||| |||||| |||||||        ||||||||||||||| |||||||||||    
T  5428102 ctaaaaccacccctcctcgatgaacgaaggagaaagaaaatttagagagaagttggagtttctctct 5428168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 32448783 - 32448882
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    |||||||||||||||||||| |||||| ||||||||||| |||| |||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||    
T  32448783 tgaaaatcacttatttagatcgaaaga-aaggggaaaaa-gatgcagaggggtgattttaggtcaaataatgacctaaaaccacccctcctcgatgagtg 32448880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 14955477 - 14955361
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    |||||||||||  || || |||||||||||||||||||||||| ||| |||||||||||| |||||| |||||||| |||||| | |||| ||||| |||    
T  14955477 aaaaacttgatgtatgtggaaatcacttatttagattgaaaga-aagaggaaaaaagatgcagagggatgattctaggtcaaaaattgacttaaaatcac 14955379  T
Q  154 ccctcctagatgaatgaa 171  Q
    ||||||| ||||| ||||    
T  14955378 ccctcctcgatgagtgaa 14955361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 29279670 - 29279833
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    |||||||||||| |||||||||||| ||||||||          ||||||||||||| || |||||| |||||||||||||||||||| ||| |||||||    
T  29279670 cacaacgccgcaattagacgacgaaatcacaaaaaacacaaaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaagaaaagaggaaaaa 29279769  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaag 172  Q
    ||||||||||| | |||| | |  |||| |||||||||||| | | | |||| |||||||||||    
T  29279770 agatgtagaggagcgatttttacccaaaaaatgacctaaaatcgctcatcctcgatgaatgaag 29279833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 12677491 - 12677595
Alignment:
Q  105 aaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagttt 204  Q
    ||||||||||||||||||||||||| |||||| |||||||| |||| ||||||||| ||||||  ||||||       |||||||||||||||| |||||    
T  12677491 aaaaagatgtagaggggtgattctaggtcaaaaaatgaccttaaactacccctcctcgatgaacaaaggagaaagaaagtttagagagaagttggagttt 12677590  T
Q  205 ctctc 209  Q
    |||||    
T  12677591 ctctc 12677595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 29574770 - 29574883
Alignment:
Q  46 cacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacct 145  Q
    ||||||| ||| |||||||| || || |||||||||||||||||||||||| || || ||||| |||| | | ||||||||||| |||||| ||||| ||    
T  29574770 cacaaaaaaaacacttgatatatgtggaaatcacttatttagattgaaagaaaatggaaaaaaggatgcaca-gggtgattctaggtcaaaaaatgatct 29574868  T
Q  146 aaaaccacccctcct 160  Q
    |||||||||||||||    
T  29574869 aaaaccacccctcct 29574883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 207
Target Start/End: Complemental strand, 8809213 - 8809084
Alignment:
Q  77 cacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagn 176  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||| || |||||| ||||| |||||||||||  |||| || | |||||||||     
T  8809213 cacttattttgattgaaagaaaagaggaaaaaagatgtagaggggtgattttaggtcaaa-aatgatctaaaaccacctgtcctcgacgtatgaaggaga 8809115  T
Q  177 nnnnnngtttagagagaagttgaagtttctc 207  Q
          |||||||||||||||  ||||||||    
T  8809114 aagaaagtttagagagaagttagagtttctc 8809084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 11833423 - 11833322
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    |||||| |||||||||| ||||||||| ||| | |||||||||||| |||  ||||| ||||||||| |||||||||||||||||| | ||||| |||||    
T  11833423 tgaaaaccacttatttaaattgaaagaaaagagaaaaaaagatgtaaaggaatgattttaagtcaaaaaatgacctaaaaccacccattctagaggaatg 11833324  T
Q  170 aa 171  Q
    ||    
T  11833323 aa 11833322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 35220281 - 35220131
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    |||||||||||  || |||||| ||||||||||||||  || ||  ||||  |||||||| ||||||||||||||| |||||| ||| ||||||||||||    
T  35220281 aaaaacttgatttatgtgaaaaccacttatttagatttgaaaag--ggggggaaaagatggagaggggtgattctaggtcaaaaaataacctaaaaccac 35220184  T
Q  154 ccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||   ||||||||||||||       ||||||||||| |||| ||||||||||    
T  35220183 ccctc---gatgaatgaaggagaaagaaagtttagagagaggttggagtttctctc 35220131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 37994212 - 37994113
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    ||||||||||||||||| || |||||| ||||||||| || ||| ||||||||||||||| |||||| |||||||||||||||||| |||| ||||| ||    
T  37994212 tgaaaatcacttatttaaatcgaaaga-aaggggaaacaaaatgcagaggggtgattctaggtcaaa-aatgacctaaaaccacccttcctcgatgattg 37994115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 24461396 - 24461288
Alignment:
Q  49 aaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    |||| ||| |||||||| || || ||||||||||||||||||||||   || | |||||  |||| ||||| ||||||||| |||||| |||||||||||    
T  24461396 aaaaaaaacacttgatatatgtggaaatcacttatttagattgaaa---aaagagaaaacggatgcagaggagtgattctaggtcaaaaaatgacctaaa 24461300  T
Q  149 accacccctcct 160  Q
    ||||||||||||    
T  24461299 accacccctcct 24461288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 6436546 - 6436459
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    |||||||||||||||||||| |||||| | | ||||||| | || ||||||||||||||| |||||| |||||||||||| ||||||||    
T  6436546 tgaaaatcacttatttagatcgaaagaaatgaggaaaaatg-tgcagaggggtgattctatgtcaaaaaatgacctaaaatcacccctc 6436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 30400188 - 30400304
Alignment:
Q  60 ttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggg-gtgattctaagtcaaagaatgacctaaaaccacccctc 158  Q
    |||||| || |||||| |||||||||||||| ||||| || |  |||||||||||||| || |||||| || |||||| ||||| ||||||||||| ||     
T  30400188 ttgatatatgtgaaaaacacttatttagattaaaagaaaaagaaaaaaaagatgtagatggagtgattttaggtcaaaaaatgatctaaaaccacctctt 30400287  T
Q  159 ctagatgaatgaaggag 175  Q
    || ||||||||||||||    
T  30400288 ctcgatgaatgaaggag 30400304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 19029068 - 19029151
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccaccc 155  Q
    |||||||||||||||||||| |||| |||||||| ||||||||| ||| ||||||||||| |||||| ||||| | ||||||||||    
T  19029068 tgaaaatcacttatttagatcgaaa-agaaggggtaaaaagatggagatgggtgattctaggtcaaa-aatgatccaaaaccaccc 19029151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 17994876 - 17994960
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacc 154  Q
    |||||| |||||||| ||||||||||| ||  |||||||||||| |||| ||||||| || | |||| |||||||||||||||||    
T  17994876 tgaaaaccacttattaagattgaaagaaaataggaaaaaagatgcagagaggtgattttagggcaaaaaatgacctaaaaccacc 17994960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 23933766 - 23933837
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgatt 126  Q
    ||||| |||||| || ||||| ||||||||||||||||||| | ||||| ||||||||||||||| |||||||    
T  23933766 aaaaaattgatatatgtgaaagtcacttatttagattgaaata-aagggaaaaaaagatgtagagaggtgatt 23933837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 208
Target Start/End: Original strand, 4904281 - 4904434
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || |||||| |||||||||||||||||          |||||||||||| || ||||||| || |||||| ||||||     
T  4904281 cacaaaagaaaaaacttgatatatgtgaaaaccacttatttagattgaa----------aaaaaagatgtaaagtggtgattataggtcaaaaaatgaca 4904370  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctct 208  Q
    |||||||||| ||| |  || || ||| |||       ||||||||||||||||||||||||||    
T  4904371 taaaaccaccactcttcaataaacgaatgagaaagaaagtttagagagaagttgaagtttctct 4904434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 31128923 - 31128977
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaa 107  Q
    ||||||||||||| || |||||| |||||||||||||||||||| ||| ||||||    
T  31128923 gaaaaacttgatatatgtgaaaaccacttatttagattgaaagaaaagaggaaaa 31128977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 18107898 - 18107997
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    |||||| ||||||||||  |||||||| |||||| |||| |||| | || |||||||||| |||||| |||||||||||||||||  ||||  |||||||    
T  18107898 tgaaaaccacttatttaatttgaaaga-aaggggtaaaa-gatgcaaagaggtgattctaggtcaaaaaatgacctaaaaccaccattcctcaatgaatg 18107995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 29173810 - 29173962
Alignment:
Q  10 gatggacatcacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaa 99  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||          ||||||| ||| | || |||||| ||||||||| |||||||||| ||    
T  29173810 gatgaacaacacaacgccgcacttagacgacgaaatcacaaaaaacacaaaaggaaaaacctgaaatatgtgaaaaccacttatttggattgaaagaaaa 29173909  T
Q  100 ggg--gaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||   |||||||||||||||||  |||| || |||||| ||  |||||||||||    
T  29173910 gggaaaaaaaaagatgtagagggacgattttaggtcaaaaaa--acctaaaacca 29173962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 33760357 - 33760422
Alignment:
Q  69 atgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaa 136  Q
    |||||||||| ||||||| ||||||||| |  |||| |||||||||||| ||||||||||| ||||||    
T  33760357 atgaaaatcatttatttaaattgaaagaaa--gggagaaaagatgtagatgggtgattctatgtcaaa 33760422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 36691837 - 36691755
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattcta 129  Q
    ||||||||||||| ||||||| || |||||  |||||||||||||||||||| || || | |||||| |||||||||||||||||    
T  36691837 cacaaaagaaaaaacttgatatatgtgaaac-cacttatttagattgaaagaaaaagg-agaaaagaagtagaggggtgattcta 36691755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 39310996 - 39311093
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||||| || |||||| |||||||||   || ||||| || |  |||||||| ||||| ||||||||||| |||||| |||||||||||| ||    
T  39310996 gaaaaacttgataaatgtgaaaaccacttattt---tttaaagaaaatga-aaaaaagacgtagatgggtgattctaggtcaaaaaatgacctaaaatca 39311091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 31128976 - 31129047
Alignment:
Q  138 aatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    |||||||||||| |||||||||| ||| || |||||||       |||||||||||||||||||||| ||||    
T  31128976 aatgacctaaaatcacccctcctcgatcaacgaaggagaaagaaagtttagagagaagttgaagtttttctc 31129047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 42949673 - 42949610
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaa 135  Q
    ||||||||||||||||||||||||  | || | ||||||||||| ||||||||||||  |||||||    
T  42949673 tgaaaatcacttatttagattgaa--ataaagagaaaaaagatgaagaggggtgatttcaagtcaa 42949610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 5071408 - 5071512
Alignment:
Q  70 tgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatg 169  Q
    ||||||||||||||||| ||  |||||||||  |||||| ||| |||| ||||||||  | |||||| | |||||  |||||||||||| | |||| |||    
T  5071408 tgaaaatcacttatttaaata-aaagagaagaagaaaaacgatttagaagggtgatttaaggtcaaaaattgaccataaaccacccctcgttgatggatg 5071506  T
Q  170 aaggag 175  Q
    ||||||    
T  5071507 aaggag 5071512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 28718134 - 28718194
Alignment:
Q  96 agaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccct 157  Q
    |||| ||||||||||||| ||| |  |||||||| |||||| ||||||||||||||||||||    
T  28718134 agaaagggaaaaaagatgcagatgaatgattctatgtcaaa-aatgacctaaaaccacccct 28718194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 25509208 - 25509264
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaa 109  Q
    ||||||||||||| || | |||| || ||||||||||||||||| ||| ||||||||    
T  25509208 gaaaaacttgatatatcttaaaaccatttatttagattgaaagaaaagaggaaaaaa 25509264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 28227832 - 28227872
Alignment:
Q  56 aaacttgatagatatgaaaatcacttatttagattgaaaga 96  Q
    ||||||||||  | |||||||||||||||||||||||||||    
T  28227832 aaacttgatatttgtgaaaatcacttatttagattgaaaga 28227872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 32891 - 33047
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||    
T  32891 gaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaggggacaaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaacca 32990  T
Q  153 cccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
    | |||||| ||| || |||| ||       |||||||||||||||  ||||||||||    
T  32991 ctcctcctcgataaacgaagaagaaagaaagtttagagagaagttagagtttctctc 33047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 50776 - 50578
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaa----------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaa 108  Q
    ||||||||||||||||||||||||| |||| |||          |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  50776 cacaacgccgcacttagacgacgaaatcacgaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaaggggaaaaa 50677  T
Q  109 agatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctc 207  Q
    |||||||||||| |||||||| |||||| | |||||||||| ||||||||||  ||||| |||||||       ||||||| |||||||| ||||||||    
T  50676 agatgtagagggatgattctaggtcaaaaagtgacctaaaatcacccctcctcaatgaacgaaggagaaagaaagtttagaaagaagttggagtttctc 50578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 2107 - 2272
Alignment:
Q  46 cacaaaagaaaaa-cttgatagatatgaaaatcacttatttagattgaaagagaa-ggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||||||| |||||||||| |||||  |||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||||| ||||||    
T  2107 cacaaaagaaaaaacttgatagatgtgaaac-cacttatttagattgaaagaaaaaggggaaaaaagatgtagaggggtgattctagatcaaaaaatgac 2205  T
Q  144 ctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctct 210  Q
     ||||||||| |||||| |||||| |||||||       |||||||||||||||| |||||||||||    
T  2206 ttaaaaccactcctcctcgatgaacgaaggagaaaaaaagtttagagagaagttggagtttctctct 2272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 1297 - 1138
Alignment:
Q  46 cacaaaaga-aaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    ||||||||| ||||||||||| || |||||| |||||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||||| |||||||    
T  1297 cacaaaagagaaaacttgatatatgtgaaaaccacttatttagagtgaaagaaaaggg-aaaaaagaagtagaggggtgattctaggtcaaaaaatgacc 1199  T
Q  145 taaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttc 205  Q
    |||||||||| ||||| |||||| |||||||        ||||||||||||||||||||||    
T  1198 taaaaccacctctcctcgatgaacgaaggagaaagaaaatttagagagaagttgaagtttc 1138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 1787 - 1924
Alignment:
Q  22 aacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagagggg 121  Q
    |||| |||||| |||||||||| |||| |||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||| |||| ||    
T  1787 aacgtcgcactaagacgacgaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaaga-aaggggaaaaaagatgcagagagg 1885  T
Q  122 tgattctaagtcaaagaatgacctaaaaccacccctcct 160  Q
    |||||||| |||||| | |||||||| | ||||||||||    
T  1886 tgattctaggtcaaaaattgacctaatatcacccctcct 1924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 14982 - 15137
Alignment:
Q  54 aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccac 153  Q
    |||||||||||| |  ||||||  ||||||||||||||||||| || |||||||||||||||||| |||||||||| |||||| ||| ||||||  ||||    
T  14982 aaaaacttgatatacttgaaaacgacttatttagattgaaagaaaaagggaaaaaagatgtagagtggtgattctaggtcaaaaaataacctaaccccac 15081  T
Q  154 ccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctctc 209  Q
     | |||| ||||||||||||||       |||||||||||| ||| ||||||||||    
T  15082 acatcctcgatgaatgaaggagaaagaaagtttagagagaaattggagtttctctc 15137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 58215 - 58329
Alignment:
Q  46 cacaaaagaaaa-acttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacc 144  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||||| ||||  ||||| |||| |||||||||||| || |||||| |||||||    
T  58215 cacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaagaaaagga-aaaaaggatgcagaggggtgattttaggtcaaaaaatgacc 58313  T
Q  145 taaaaccacccctcct 160  Q
    ||||||||||||||||    
T  58314 taaaaccacccctcct 58329  T

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Target: scaffold0603 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 7661 - 7541
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||||| || |||||| |||||||||| ||||||||| |||||| |||| |||| ||| | ||||||||| |||||| |||||||||||||||    
T  7661 gaaaaacttgatatatgtgaaaaccacttatttaaattgaaaga-aaggggtaaaa-gatgcagatgagtgattctaggtcaaaaaatgacctaaaacca 7564  T
Q  153 cccctcctagatgaatgaaggag 175  Q
     ||||||| ||||||| ||||||    
T  7563 tccctcctcgatgaataaaggag 7541  T

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Target: scaffold0087 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 25525 - 25628
Alignment:
Q  106 aaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttc 205  Q
    ||||||||||||||||||||| || |||||| |||||| |||||||||||||||| |||||| |||||||        |||||||| |||||||||||||    
T  25525 aaaagatgtagaggggtgattataggtcaaaaaatgacataaaaccacccctcctcgatgaacgaaggagaaaatttttttagagaaaagttgaagtttc 25624  T
Q  206 tctc 209  Q
    ||||    
T  25625 tctc 25628  T

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Target: scaffold0049 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 71399 - 71569
Alignment:
Q  19 cacaacgccgcacttagacgacgaagtcacaaaagaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    ||||||||||| ||||||||||||| | ||||||     | |||||| || |||||| ||||| |||||||||||||| ||| ||  |||| ||||||||    
T  71399 cacaacgccgcccttagacgacgaaattacaaaa-----atttgatatatgtgaaaaccacttgtttagattgaaagaaaagagg--aaaatatgtagag 71491  T
Q  119 gggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagt 202  Q
    |||||||| || |||||| |||||||||||||||||||| ||   ||||||||||||       ||||||||||||||||||||    
T  71492 gggtgattttaggtcaaa-aatgacctaaaaccaccccttctctgtgaatgaaggag-----aagtttagagagaagttgaagt 71569  T

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Target: scaffold0039 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 93025 - 92928
Alignment:
Q  73 aaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaa 171  Q
    |||||||||||||||||||||||| |||| ||||||||||| |   || |||||||| |||||| ||| |||||||||||||||||||| |||||||||    
T  93025 aaatcacttatttagattgaaaga-aaggagaaaaaagatgcacgaggatgattctaggtcaaaaaataacctaaaaccacccctcctatatgaatgaa 92928  T

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Target: scaffold0154 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 25280 - 25124
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaaga-gaagggg---aaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaa 148  Q
    ||||||||||||| ||||||||  |||||||||||||||||||| |||| ||   ||||||||| |||| | |||||| ||||||||| | |||| ||||    
T  25280 gaaaaacttgatatatatgaaac-cacttatttagattgaaagaagaagagggaaaaaaaagatatagatgagtgattttaagtcaaaaagtgacttaaa 25182  T
Q  149 accacccctcctagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttctct 208  Q
    |||||||||||  |||||||||| |||       ||||||||| ||||||||||||||||    
T  25181 accacccctcc--gatgaatgaaagagaaagaaagtttagagaaaagttgaagtttctct 25124  T

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Target: scaffold0492 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 12861 - 12747
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    |||| |||||||  || |||||| |||||||||| ||||| ||| |||| ||||||  ||||| || |||||||||| |||||| |||||||||||||||    
T  12861 gaaacacttgatgtatgtgaaaaccacttatttaaattgatagaaaaggagaaaaat-atgtatagcggtgattctaggtcaaaaaatgacctaaaacca 12763  T
Q  153 cccctcctagatgaat 168  Q
    || ||||| |||||||    
T  12762 cctctccttgatgaat 12747  T

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Target: scaffold0554 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 206
Target Start/End: Complemental strand, 10815 - 10672
Alignment:
Q  60 ttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcc 159  Q
    |||||| || |||||| |||||||||| ||| ||||| || | |||||| ||| ||||||||||| | || ||||||  |||||||||||||||| ||||    
T  10815 ttgatatatgtgaaaaccacttatttacattcaaagaaaaagcgaaaaa-gatctagaggggtgactttaggtcaaa--atgacctaaaaccacctctcc 10719  T
Q  160 tagatgaatgaaggagnnnnnnngtttagagagaagttgaagtttct 206  Q
    | ||||||||||||||       |||||||||||||||  |||||||    
T  10718 tcgatgaatgaaggaggaagcaagtttagagagaagttagagtttct 10672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 31413 - 31486
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgatt 126  Q
    ||||||||||||| || ||||||  ||||||||| ||||||||| ||| |||||||||||||||||| ||||||    
T  31413 gaaaaacttgatatatgtgaaaactacttatttatattgaaagaaaagaggaaaaaagatgtagaggagtgatt 31486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 167
Target Start/End: Complemental strand, 8467 - 8346
Alignment:
Q  45 tcacaaaag-aaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgac 143  Q
    ||||||||| ||||||| |||| || | |||| ||||||||||| || ||||| |||   ||||||| ||||||||||||||| || |||||| ||| ||    
T  8467 tcacaaaagcaaaaactggatatatgtaaaaaccacttatttagcttaaaagaaaaga--aaaaaaggtgtagaggggtgattataggtcaaaaaataac 8370  T
Q  144 ctaaaaccacccctcctagatgaa 167  Q
     |||||||||||||||| ||||||    
T  8369 ttaaaaccacccctcctcgatgaa 8346  T

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Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 37992 - 37929
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtaga 117  Q
    ||||||||||| | || |||||| |||||||||||||||||||| ||||||||||||||||||||    
T  37992 gaaaaacttgacatatgtgaaaaccacttatttagattgaaaga-aaggggaaaaaagatgtaga 37929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 10142 - 10304
Alignment:
Q  20 acaacgccgcacttagacgacgaagtcacaaaa---------gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaag 110  Q
    |||| ||||||||||||||||||| ||||||||         ||||||||||||| || |||||| ||||||||||||| |||||| ||  | ||||||     
T  10142 acaaagccgcacttagacgacgaaatcacaaaaacacaaaaggaaaaacttgatatatgtgaaaaccacttatttagatggaaaga-aaacgaaaaaaat 10240  T
Q  111 atgtagaggggtgattctaagtcaaagaatgacctaaaaccacccctcctagatgaatgaaggag 175  Q
    ||||||| | ||||||||| || ||| |||||| ||||| || || ||||  ||||| |||||||    
T  10241 atgtagatgagtgattctaggtgaaa-aatgacataaaatcatccatcctcaatgaacgaaggag 10304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 8021 - 7902
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtc-aaagaatgacctaaaacc 151  Q
    |||||||||||||||| |||||| |||| |||||||| ||||||||    ||||||||||||||| ||||||||||| ||| ||| ||||||| ||||||    
T  8021 gaaaaacttgatagatgtgaaaaccactaatttagatcgaaagaga--tagaaaaaagatgtaga-gggtgattctaggtcaaaaaaatgacccaaaacc 7925  T
Q  152 acccctcctagatgaatgaagga 174  Q
    || | |  | |||||||||||||    
T  7924 acgcatttttgatgaatgaagga 7902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 172
Target Start/End: Original strand, 1961 - 2079
Alignment:
Q  53 gaaaaacttgatagatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaacca 152  Q
    ||||||||||||| || || ||| |||||||||| ||||||||| ||| |||||||||||||||| | |||||| || || ||| || ||||||||| ||    
T  1961 gaaaaacttgatatatgtgcaaaccacttatttaaattgaaagaaaagaggaaaaaagatgtagatgagtgattttaggt-aaaaaaagacctaaaaaca 2059  T
Q  153 cccctcctagatgaatgaag 172  Q
    |  |||||  ||||||||||    
T  2060 catctcctcaatgaatgaag 2079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 6297 - 6210
Alignment:
Q  65 agatatgaaaatcacttatttagattgaaagagaaggggaaaaaagatgtagaggggtgattctaagtcaaagaatgacctaaaaccaccc 155  Q
    |||| |||||||||||||||||||||| || |||   | |||||||||| |||||||||||| || |||||  | |||||| |||||||||    
T  6297 agatgtgaaaatcacttatttagattggaataga---gaaaaaaagatgaagaggggtgattttaggtcaagaattgacctgaaaccaccc 6210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 5938 - 5894
Alignment:
Q  73 aaatcacttatttagattgaaagagaaggggaaaaaagatgtagag 118  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||    
T  5938 aaatcacttatttagattgaaaga-aaggagaaaaaagatgcagag 5894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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