View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6879_low_27 (Length: 256)

Name: NF6879_low_27
Description: NF6879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6879_low_27
NF6879_low_27
[»] chr3 (49 HSPs)
chr3 (1-236)||(35864583-35864822)
chr3 (1-69)||(20464757-20464826)
chr3 (1-70)||(54149223-54149288)
chr3 (1-69)||(6954488-6954552)
chr3 (1-69)||(43017120-43017184)
chr3 (1-67)||(45568239-45568301)
chr3 (8-69)||(46304313-46304370)
chr3 (1-69)||(9998699-9998763)
chr3 (1-69)||(10108468-10108532)
chr3 (1-69)||(21533601-21533665)
chr3 (5-69)||(36910558-36910618)
chr3 (1-69)||(40487557-40487621)
chr3 (1-69)||(52922909-52922973)
chr3 (2-69)||(9797326-9797389)
chr3 (27-69)||(10233324-10233366)
chr3 (27-69)||(23799740-23799782)
chr3 (31-69)||(35175661-35175699)
chr3 (28-69)||(10229731-10229772)
chr3 (1-66)||(43488386-43488447)
chr3 (1-69)||(4711714-4711778)
chr3 (11-69)||(20608690-20608749)
chr3 (1-69)||(21313268-21313332)
chr3 (9-69)||(21431855-21431911)
chr3 (3-67)||(37041002-37041062)
chr3 (27-69)||(11819512-11819553)
chr3 (27-69)||(13701662-13701703)
chr3 (27-69)||(14585890-14585931)
chr3 (27-69)||(19645618-19645659)
chr3 (27-69)||(24396291-24396333)
chr3 (27-69)||(24483356-24483397)
chr3 (27-69)||(47896405-47896447)
chr3 (27-69)||(48401520-48401562)
chr3 (1-68)||(48650527-48650590)
chr3 (27-69)||(49627764-49627805)
chr3 (27-69)||(50981125-50981167)
chr3 (27-69)||(51084259-51084301)
chr3 (27-69)||(55090359-55090400)
chr3 (27-69)||(55455290-55455331)
chr3 (27-60)||(1074562-1074595)
chr3 (27-60)||(2192506-2192539)
chr3 (27-60)||(7448715-7448748)
chr3 (27-60)||(7456857-7456890)
chr3 (33-70)||(12149574-12149611)
chr3 (1-69)||(19619945-19620014)
chr3 (1-67)||(31271626-31271688)
chr3 (27-60)||(32080431-32080464)
chr3 (27-60)||(54706400-54706433)
chr3 (27-59)||(2148168-2148200)
chr3 (1-70)||(40556934-40556999)
[»] chr6 (25 HSPs)
chr6 (1-69)||(3913366-3913430)
chr6 (1-69)||(12170702-12170766)
chr6 (1-69)||(32327012-32327076)
chr6 (27-69)||(127921-127963)
chr6 (27-70)||(31936284-31936326)
chr6 (1-69)||(32060110-32060174)
chr6 (1-69)||(33052960-33053024)
chr6 (28-70)||(34185485-34185527)
chr6 (1-67)||(21426480-21426542)
chr6 (1-67)||(30894832-30894894)
chr6 (1-69)||(67793-67857)
chr6 (1-69)||(606438-606502)
chr6 (1-69)||(9341443-9341507)
chr6 (27-69)||(4660856-4660897)
chr6 (27-69)||(5146354-5146395)
chr6 (27-69)||(12653970-12654011)
chr6 (27-69)||(15589777-15589818)
chr6 (27-69)||(19402504-19402545)
chr6 (27-69)||(23654677-23654718)
chr6 (27-69)||(30813485-30813526)
chr6 (31-69)||(31297079-31297117)
chr6 (28-69)||(19164821-19164862)
chr6 (27-60)||(29920577-29920610)
chr6 (29-69)||(7514995-7515035)
chr6 (27-67)||(11321338-11321378)
[»] chr4 (40 HSPs)
chr4 (1-67)||(43095881-43095948)
chr4 (1-69)||(56040438-56040502)
chr4 (3-69)||(21686034-21686096)
chr4 (1-69)||(2521032-2521096)
chr4 (1-69)||(13634368-13634432)
chr4 (1-69)||(19853304-19853368)
chr4 (1-69)||(26633463-26633527)
chr4 (1-69)||(32766767-32766831)
chr4 (28-69)||(10496612-10496653)
chr4 (31-68)||(43853733-43853770)
chr4 (1-53)||(54022112-54022165)
chr4 (1-69)||(4142556-4142620)
chr4 (1-61)||(17949123-17949179)
chr4 (1-61)||(17952975-17953031)
chr4 (27-70)||(45350721-45350763)
chr4 (27-70)||(45360200-45360242)
chr4 (30-69)||(56156440-56156479)
chr4 (27-69)||(7084370-7084411)
chr4 (27-69)||(8517111-8517152)
chr4 (31-69)||(8670758-8670796)
chr4 (31-69)||(9048953-9048991)
chr4 (27-69)||(11209965-11210006)
chr4 (27-69)||(12493607-12493649)
chr4 (27-69)||(13965971-13966012)
chr4 (27-69)||(14346838-14346879)
chr4 (27-69)||(24826067-24826108)
chr4 (31-69)||(36162001-36162039)
chr4 (27-69)||(38435005-38435046)
chr4 (27-69)||(42197981-42198022)
chr4 (27-69)||(43244033-43244074)
chr4 (1-60)||(48257433-48257488)
chr4 (27-60)||(6882372-6882405)
chr4 (27-60)||(7060742-7060775)
chr4 (28-61)||(7273605-7273638)
chr4 (1-59)||(24098871-24098925)
chr4 (28-69)||(27360032-27360073)
chr4 (27-60)||(29266564-29266597)
chr4 (27-60)||(31522374-31522407)
chr4 (37-69)||(9180735-9180767)
chr4 (29-69)||(55600198-55600237)
[»] scaffold0121 (1 HSPs)
scaffold0121 (4-69)||(31066-31127)
[»] chr8 (31 HSPs)
chr8 (1-69)||(40618863-40618927)
chr8 (27-69)||(19443843-19443885)
chr8 (1-69)||(27110250-27110319)
chr8 (1-69)||(7883031-7883095)
chr8 (1-69)||(9637199-9637263)
chr8 (1-69)||(17693403-17693467)
chr8 (1-61)||(23230878-23230934)
chr8 (1-69)||(28086602-28086666)
chr8 (2-69)||(37971523-37971586)
chr8 (1-68)||(40211091-40211154)
chr8 (1-59)||(16928557-16928611)
chr8 (7-69)||(27498156-27498214)
chr8 (1-69)||(30568111-30568175)
chr8 (27-69)||(2234130-2234171)
chr8 (28-66)||(15596946-15596984)
chr8 (27-69)||(24790830-24790871)
chr8 (27-69)||(31202876-31202917)
chr8 (27-69)||(39152917-39152959)
chr8 (27-60)||(1809906-1809939)
chr8 (27-60)||(2968943-2968976)
chr8 (27-60)||(4757576-4757609)
chr8 (27-60)||(9501996-9502029)
chr8 (28-69)||(10377932-10377973)
chr8 (28-69)||(37613065-37613105)
chr8 (27-60)||(41362161-41362194)
chr8 (1-59)||(41684608-41684662)
chr8 (33-69)||(3673704-3673740)
chr8 (29-69)||(20227067-20227107)
chr8 (27-67)||(33214463-33214503)
chr8 (33-69)||(34680663-34680699)
chr8 (28-60)||(38545484-38545516)
[»] chr7 (29 HSPs)
chr7 (1-69)||(12141099-12141163)
chr7 (1-69)||(28044548-28044612)
chr7 (1-67)||(28407712-28407774)
chr7 (1-66)||(8001341-8001402)
chr7 (1-69)||(9977002-9977066)
chr7 (1-69)||(34899399-34899463)
chr7 (27-69)||(17611651-17611693)
chr7 (1-60)||(37837259-37837314)
chr7 (27-67)||(25286982-25287022)
chr7 (1-66)||(40993392-40993453)
chr7 (1-69)||(48061657-48061721)
chr7 (27-69)||(2623020-2623061)
chr7 (27-69)||(4621032-4621073)
chr7 (27-69)||(21991090-21991131)
chr7 (27-69)||(38277225-38277266)
chr7 (27-69)||(41288384-41288425)
chr7 (31-69)||(43369549-43369587)
chr7 (27-69)||(44482530-44482571)
chr7 (27-69)||(48643478-48643519)
chr7 (27-60)||(8180229-8180262)
chr7 (27-60)||(11833446-11833479)
chr7 (27-60)||(25854886-25854919)
chr7 (27-60)||(37375716-37375749)
chr7 (28-69)||(48316611-48316652)
chr7 (28-60)||(10094869-10094901)
chr7 (27-59)||(21603886-21603918)
chr7 (33-69)||(24610051-24610087)
chr7 (29-69)||(39707698-39707737)
chr7 (29-69)||(44311580-44311620)
[»] chr5 (26 HSPs)
chr5 (1-69)||(9113517-9113581)
chr5 (1-69)||(13007461-13007525)
chr5 (1-69)||(34945625-34945689)
chr5 (1-70)||(14082187-14082252)
chr5 (1-70)||(24229575-24229640)
chr5 (1-62)||(38598029-38598086)
chr5 (1-69)||(1409732-1409796)
chr5 (1-69)||(6011930-6011994)
chr5 (1-69)||(38007589-38007653)
chr5 (33-70)||(6217158-6217195)
chr5 (28-69)||(26825685-26825726)
chr5 (28-67)||(4771111-4771150)
chr5 (1-69)||(14726253-14726317)
chr5 (31-69)||(8984781-8984819)
chr5 (27-69)||(9196683-9196724)
chr5 (1-66)||(11867881-11867947)
chr5 (27-69)||(17331756-17331797)
chr5 (27-69)||(23881768-23881809)
chr5 (27-69)||(34431492-34431533)
chr5 (27-69)||(39531060-39531101)
chr5 (27-69)||(42505065-42505106)
chr5 (27-60)||(586168-586201)
chr5 (27-60)||(3740760-3740793)
chr5 (1-67)||(8096293-8096354)
chr5 (28-60)||(6281473-6281505)
chr5 (27-67)||(40268311-40268351)
[»] chr2 (48 HSPs)
chr2 (1-69)||(5427662-5427726)
chr2 (1-69)||(31788699-31788763)
chr2 (1-69)||(37876399-37876463)
chr2 (1-67)||(11985028-11985090)
chr2 (1-69)||(31193129-31193193)
chr2 (1-69)||(36942915-36942979)
chr2 (31-69)||(24461708-24461746)
chr2 (1-68)||(35220571-35220634)
chr2 (2-69)||(36692118-36692181)
chr2 (28-69)||(459051-459092)
chr2 (28-69)||(12553962-12554003)
chr2 (1-69)||(29279358-29279427)
chr2 (28-69)||(41328005-41328046)
chr2 (27-67)||(7071428-7071468)
chr2 (8-69)||(38445416-38445473)
chr2 (1-69)||(1415800-1415864)
chr2 (1-69)||(4778996-4779060)
chr2 (1-69)||(18763711-18763775)
chr2 (1-69)||(25508861-25508925)
chr2 (27-70)||(33012476-33012518)
chr2 (1-69)||(33585528-33585592)
chr2 (1-69)||(33923948-33924012)
chr2 (27-69)||(3527414-3527455)
chr2 (27-69)||(4903938-4903980)
chr2 (27-69)||(13878661-13878702)
chr2 (27-69)||(14018786-14018827)
chr2 (27-69)||(16136506-16136547)
chr2 (27-69)||(20560785-20560826)
chr2 (27-69)||(25068269-25068310)
chr2 (27-69)||(28230749-28230790)
chr2 (27-69)||(29543221-29543262)
chr2 (27-69)||(30923250-30923292)
chr2 (27-69)||(35333933-35333974)
chr2 (31-69)||(37994552-37994590)
chr2 (27-69)||(43696296-43696337)
chr2 (27-60)||(4739757-4739790)
chr2 (1-61)||(8809522-8809580)
chr2 (36-69)||(12646912-12646945)
chr2 (1-67)||(12677246-12677308)
chr2 (3-69)||(17994513-17994581)
chr2 (28-69)||(19062141-19062182)
chr2 (27-60)||(31908477-31908510)
chr2 (27-60)||(32015681-32015714)
chr2 (28-69)||(36868437-36868477)
chr2 (27-60)||(44942714-44942747)
chr2 (27-67)||(3390830-3390869)
chr2 (28-60)||(4603976-4604008)
chr2 (27-70)||(18107528-18107574)
[»] chr1 (26 HSPs)
chr1 (1-69)||(7337455-7337519)
chr1 (1-69)||(11462274-11462338)
chr1 (1-69)||(26535572-26535636)
chr1 (1-69)||(35484183-35484247)
chr1 (1-69)||(44915875-44915939)
chr1 (1-69)||(27456720-27456789)
chr1 (1-61)||(31919225-31919286)
chr1 (1-69)||(10776253-10776317)
chr1 (27-69)||(33486687-33486729)
chr1 (3-69)||(21687616-21687678)
chr1 (1-66)||(23289187-23289248)
chr1 (1-69)||(4413350-4413414)
chr1 (27-66)||(21947413-21947452)
chr1 (1-69)||(36894200-36894264)
chr1 (1-69)||(49504387-49504451)
chr1 (27-69)||(4882029-4882070)
chr1 (27-69)||(12872034-12872075)
chr1 (27-69)||(13152855-13152896)
chr1 (27-69)||(29205696-29205737)
chr1 (27-69)||(44517576-44517617)
chr1 (31-69)||(47133164-47133202)
chr1 (27-60)||(2351028-2351061)
chr1 (27-60)||(25032763-25032796)
chr1 (1-67)||(51373652-51373714)
chr1 (1-70)||(51916466-51916531)
chr1 (33-69)||(50377587-50377623)
[»] scaffold0113 (1 HSPs)
scaffold0113 (26-69)||(36465-36508)
[»] scaffold0603 (1 HSPs)
scaffold0603 (27-69)||(7982-8024)
[»] scaffold0536 (1 HSPs)
scaffold0536 (27-69)||(3323-3364)
[»] scaffold0157 (1 HSPs)
scaffold0157 (27-69)||(26828-26870)
[»] scaffold0155 (1 HSPs)
scaffold0155 (27-69)||(35503-35544)
[»] scaffold0039 (1 HSPs)
scaffold0039 (27-69)||(53193-53235)
[»] scaffold0634 (1 HSPs)
scaffold0634 (33-70)||(8774-8811)
[»] scaffold0294 (1 HSPs)
scaffold0294 (27-60)||(3727-3760)
[»] scaffold0026 (1 HSPs)
scaffold0026 (3-69)||(71662-71724)
[»] scaffold0049 (1 HSPs)
scaffold0049 (29-69)||(71092-71132)


Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 35864822 - 35864583
Alignment:
Q  1 tttagcgatgtttgtatctgatgtga-gtactctatcaatttgaatgaacgaatatcgttttatttttgttnnnnnnn---tagtaatgatatttatggt 96  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||| ||    
T  35864822 tttagagatgtttgtatctgatgtgatgtactctatcaatttgaatgaacgaatatcgttttatttttgttaaaaaaaaaatagtaatgatatttatagt 35864723  T
Q  97 atattattttgagttattaattattaatagagggaaataaattggtactccatctcgatacaaatatttggttgtcggtttgtgtgagtttcattactag 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35864722 atattattttgagttattaattattaatagagggaaataaattggtactccatctcgatacaaatatttggttgtcggtttgtgtgagtttcattactag 35864623  T
Q  197 ggtgttatcggtcctgcaatcaatggtaaatgaatatctt 236  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35864622 ggtgttatcggtcctgcaatcaatggtaaatgaatatctt 35864583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20464826 - 20464757
Alignment:
Q  1 tttagcgatgtttgtatctgatgtga-gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||| |||| |||||||    
T  20464826 tttagcgatgtttgtatctgatctgatgtactctatcaatttgaatgaatgaatatcattttgtttttgt 20464757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 54149223 - 54149288
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| ||||||||||| |||||||||    
T  54149223 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgtttaatttttgtt 54149288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6954552 - 6954488
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||    ||||||||||| ||||||||||| |||||||||||| |||||||    
T  6954552 tttagcgatgtttgtatctga----agtactctatcgatttgaatgaatgaatatcgttttgtttttgt 6954488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43017120 - 43017184
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  43017120 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 43017184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 45568301 - 45568239
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||    
T  45568301 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgttttt 45568239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 46304370 - 46304313
Alignment:
Q  8 atgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||    |||||||||||||||||||| |||||||||||| |||||||    
T  46304370 atgtttgtatctgatgt----actctatcaatttgaatgaatgaatatcgttttgtttttgt 46304313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9998699 - 9998763
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||| |||||||||| ||||||    |||||||| ||||||||||| ||||||||||||||||||||    
T  9998699 tttagctatgtttgtatttgatgt----actctatcgatttgaatgaatgaatatcgttttatttttgt 9998763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10108468 - 10108532
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||| |||||||||| ||||||    |||||||| ||||||||||| ||||||||||||||||||||    
T  10108468 tttagctatgtttgtatttgatgt----actctatcgatttgaatgaatgaatatcgttttatttttgt 10108532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21533665 - 21533601
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| ||||||| |||| |||||||    
T  21533665 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcattttgtttttgt 21533601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 36910618 - 36910558
Alignment:
Q  5 gcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||| ||||||||||    |||||||| ||||||||||| ||||||||||||||||||||    
T  36910618 gcgatgtttatatctgatgt----actctatcgatttgaatgaatgaatatcgttttatttttgt 36910558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40487557 - 40487621
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||     ||||||||| ||||||||||| |||||||||||| |||||||    
T  40487557 tttagcgatgtttgtatctgat----atactctatcgatttgaatgaatgaatatcgttttgtttttgt 40487621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 52922973 - 52922909
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||| ||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  52922973 tttagcgatgtttgtatttgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 52922909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 9797389 - 9797326
Alignment:
Q  2 ttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||||    ||| |||| ||||||||||| |||||||||||| |||||||    
T  9797389 ttagcgatgtttgtatctgatgt----actatatcgatttgaatgaatgaatatcgttttgtttttgt 9797326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 10233324 - 10233366
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||| ||||||||||| ||||||||||||||||||||    
T  10233324 gtactctatcgatttgaatgaatgaatatcgttttatttttgt 10233366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 23799782 - 23799740
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  23799782 gtactctatcaatttgaatgaatgaatatcgttttgtttttgt 23799740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 35175661 - 35175699
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  35175661 tctatcaatttgaatgaatgaatatcgttttatttttgt 35175699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 10229731 - 10229772
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  10229731 tactctatcgatttgaatgaatgaatatcgttttatttttgt 10229772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43488447 - 43488386
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttt 66  Q
    ||||||||||||||||||| ||||    |||||||| ||||||||||| |||||||||||| ||||    
T  43488447 tttagcgatgtttgtatctaatgt----actctatcgatttgaatgaatgaatatcgttttgtttt 43488386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4711714 - 4711778
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||| ||||||||||||||||||    |||||||| |||||  |||| ||||||||||||||||||||    
T  4711714 tttagtgatgtttgtatctgatgt----actctatcgatttggttgaatgaatatcgttttatttttgt 4711778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 20608749 - 20608690
Alignment:
Q  11 tttgtatctgatgtga-gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||| | ||||||| ||||||||| |||| |||||||||||| |||||||    
T  20608749 tttgtatctgatgtaatgtactctctcaatttgattgaatgaatatcgttttgtttttgt 20608690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21313268 - 21313332
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||| ||||||||||||||     ||||| ||||||||||||||| |||||||||||| |||||||    
T  21313268 tttagcggtgtttgtatctgat----atactcaatcaatttgaatgaatgaatatcgttttgtttttgt 21313332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 21431855 - 21431911
Alignment:
Q  9 tgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||    |||||||| ||||||||||| |||| |||||||||||||||    
T  21431855 tgtttgtatctgatgt----actctatcgatttgaatgaatgaatgtcgttttatttttgt 21431911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 37041002 - 37041062
Alignment:
Q  3 tagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||| ||||||||||||||    ||||||||||| |||||||| |||||||||||| |||||    
T  37041002 tagcgatttttgtatctgatgt----actctatcaatctgaatgaatgaatatcgttttgttttt 37041062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 11819512 - 11819553
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  11819512 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 11819553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 13701703 - 13701662
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  13701703 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 13701662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 14585890 - 14585931
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  14585890 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 14585931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 19645618 - 19645659
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  19645618 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 19645659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 24396333 - 24396291
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||| || |||||||||||| |||||||    
T  24396333 gtactctatcaatttgaattaatgaatatcgttttgtttttgt 24396291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 24483397 - 24483356
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  24483397 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 24483356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 47896405 - 47896447
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||| || |||||||||||| |||||||    
T  47896405 gtactctatcaatttgaatcaatgaatatcgttttgtttttgt 47896447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 48401520 - 48401562
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  48401520 gtactctatcaatttgaatgaatgaatatcgtttattttttgt 48401562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48650590 - 48650527
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttg 68  Q
    ||||||||| ||||||||||||||    |||||||| ||||||||||| ||||||| |||| ||||||    
T  48650590 tttagcgatatttgtatctgatgt----actctatcgatttgaatgaatgaatatcattttgtttttg 48650527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 49627805 - 49627764
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  49627805 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 49627764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 50981167 - 50981125
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  50981167 gtactctatcaatttgaatgaatgaatatcgtttattttttgt 50981125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 51084301 - 51084259
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  51084301 gtactctatcaatttgaatgaatgaatatcgtttattttttgt 51084259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 55090400 - 55090359
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  55090400 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 55090359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 55455290 - 55455331
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  55455290 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 55455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 1074595 - 1074562
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  1074595 gtactctatcaatttgaatgaatgaatatcgttt 1074562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 2192506 - 2192539
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  2192506 gtactctatcaatttgaatgaatgaatatcgttt 2192539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 7448748 - 7448715
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  7448748 gtactctatcaatttgaatgaatgaatatcgttt 7448715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 7456890 - 7456857
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  7456890 gtactctatcaatttgaatgaatgaatatcgttt 7456857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 12149611 - 12149574
Alignment:
Q  33 tatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  12149611 tatcgatttgaatgaaggaatatcgttttatttttgtt 12149574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19619945 - 19620014
Alignment:
Q  1 tttagcgatgtttgtatctgatgtga-gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||| || ||| |||||||||| ||||||||||||||| ||  || ||||| ||||||||||||||    
T  19619945 tttagcgaagtctgtttctgatgtgatgtactctatcaatttaaagtaatgaataacgttttatttttgt 19620014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31271688 - 31271626
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||| ||||||||||||||     |||||||||||| |||||| |||||| |||||||||||    
T  31271688 tttagcgatatttgtatctgatgtt----ctctatcaatttaaatgaatgaatattgttttattttt 31271626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 32080464 - 32080431
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  32080464 gtactctatcaatttgaatgaaagaatatcgttt 32080431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 54706433 - 54706400
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  54706433 gtactctatcaatttgaatgaatgaatatcgttt 54706400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 2148168 - 2148200
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgtt 59  Q
    ||||||||||||||||||||||||||| |||||    
T  2148168 gtactctatcaatttgaatgaacgaatgtcgtt 2148200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40556934 - 40556999
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    ||||||||||||||||| ||||||    ||| | || ||||||||||| |||||||||||| ||||||||    
T  40556934 tttagcgatgtttgtatttgatgt----actatgtcgatttgaatgaatgaatatcgttttgtttttgtt 40556999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3913430 - 3913366
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| ||||||||||||||||||||    
T  3913430 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttatttttgt 3913366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12170702 - 12170766
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  12170702 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 12170766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 32327076 - 32327012
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  32327076 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 32327012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 127921 - 127963
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  127921 gtactctatcaatttgaatgaacaaatatcgttttatttttgt 127963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 31936326 - 31936284
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  31936326 gtactctatcaatttgaatgaacgaatatcg-tttatttttgtt 31936284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32060110 - 32060174
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||| ||||||||||||||| |    | |||||||||||||||| ||||||||||||||||||||    
T  32060110 tttagcgaagtttgtatctgatgtaa----tatatcaatttgaatgaatgaatatcgttttatttttgt 32060174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33053024 - 33052960
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||| |||||||||| ||||||    |||||||||||||||||||| |||||||||||| |||||||    
T  33053024 tttagcaatgtttgtatttgatgt----actctatcaatttgaatgaatgaatatcgttttgtttttgt 33052960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 34185527 - 34185485
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  34185527 tactctatcaatttgaatgaatgaatatcattttatttttgtt 34185485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21426542 - 21426480
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| ||||||||| || |||||    
T  21426542 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgtgttgttttt 21426480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30894832 - 30894894
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||||||||||||||||||    | || ||| ||||||||||| ||||||||||||||||||    
T  30894832 tttagcgatgtttgtatctgatgt----attccatcgatttgaatgaatgaatatcgttttattttt 30894894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 67857 - 67793
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||| |||||||||||||||     ||||||||| ||||||||||| ||||| ||||||||||||||    
T  67857 tttagcaatgtttgtatctgat----atactctatcgatttgaatgaatgaataccgttttatttttgt 67793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 606438 - 606502
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||| |||||||||||||||||||    |||||||| ||||||||||| ||||||| |||| |||||||    
T  606438 tttaacgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcattttgtttttgt 606502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9341507 - 9341443
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||| |||||||||||||||||    |||||||| ||||||||||| || ||||||||| |||||||    
T  9341507 tttagcaatgtttgtatctgatgt----actctatcgatttgaatgaatgagtatcgttttgtttttgt 9341443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 4660856 - 4660897
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  4660856 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 4660897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 5146354 - 5146395
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  5146354 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 5146395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 12654011 - 12653970
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  12654011 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 12653970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 15589818 - 15589777
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  15589818 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 15589777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 19402545 - 19402504
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  19402545 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 19402504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 23654677 - 23654718
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  23654677 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 23654718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 30813485 - 30813526
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  30813485 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 30813526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 31297079 - 31297117
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  31297079 tctatcaatttgaatgaatgaatatcgttttgtttttgt 31297117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 19164821 - 19164862
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||| |||||||||||| |||||||||||| |||||||    
T  19164821 tactctatgaatttgaatgaatgaatatcgttttgtttttgt 19164862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 29920610 - 29920577
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    ||||| ||||||||||||||||||||||||||||    
T  29920610 gtactttatcaatttgaatgaacgaatatcgttt 29920577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 7515035 - 7514995
Alignment:
Q  29 actctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||| ||||||||||| |||||||||||| |||||||    
T  7515035 actctatcgatttgaatgaatgaatatcgttttgtttttgt 7514995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 11321378 - 11321338
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||||||||||||||||  ||||||||||| |||||    
T  11321378 gtactctatcaatttgaatgaataaatatcgttttgttttt 11321338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43095881 - 43095948
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgag-tactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||| ||||||| ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  43095881 tttagggatgtttatatctgatgtgatatactctatcaatttgaatgaatgaatatcgttttattttt 43095948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 56040502 - 56040438
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  56040502 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 56040438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 21686096 - 21686034
Alignment:
Q  3 tagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  21686096 tagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 21686034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2521032 - 2521096
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||||     |||||||| ||||||||||| |||||||||||| |||||||    
T  2521032 tttagcgatgtttgtatctgatgg----actctatcgatttgaatgaatgaatatcgttttgtttttgt 2521096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13634368 - 13634432
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| ||||||| |||| |||||||    
T  13634368 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcattttgtttttgt 13634432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19853368 - 19853304
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||| |||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  19853368 tttaacgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 19853304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26633527 - 26633463
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||| ||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  26633527 tttagtgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 26633463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32766767 - 32766831
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||| ||||| |||||||    
T  32766767 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatattgttttgtttttgt 32766831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 10496612 - 10496653
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  10496612 tactctatcaatttgaatgaatgaatatcgttttaattttgt 10496653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 43853733 - 43853770
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttg 68  Q
    |||||||||||||||||| |||||||||||||||||||    
T  43853733 tctatcaatttgaatgaatgaatatcgttttatttttg 43853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 54022112 - 54022165
Alignment:
Q  1 tttagcgatgtttgtatctgatgtga-gtactctatcaatttgaatgaacgaat 53  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||| ||||    
T  54022112 tttagcgatgtttgtatctgatttgatgtactctatcaatttaaatgaatgaat 54022165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4142620 - 4142556
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||| |||||||||| ||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  4142620 tttagcaatgtttgtatttgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 4142556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17949179 - 17949123
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgtttt 61  Q
    ||||||||||||||||||||||     ||||||||| ||||||||||| ||||||||||||    
T  17949179 tttagcgatgtttgtatctgat----atactctatcgatttgaatgaatgaatatcgtttt 17949123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17953031 - 17952975
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgtttt 61  Q
    ||||||||||||||||||||||     ||||||||| ||||||||||| ||||||||||||    
T  17953031 tttagcgatgtttgtatctgat----atactctatcgatttgaatgaatgaatatcgtttt 17952975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 45350763 - 45350721
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  45350763 gtactctatcaatttgaatgaatgaatatcg-tttatttttgtt 45350721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 45360242 - 45360200
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  45360242 gtactctatcaatttgaatgaatgaatatcg-tttatttttgtt 45360200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 56156479 - 56156440
Alignment:
Q  30 ctctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  56156479 ctctatcaatttgaatgaatgaatatcgttttgtttttgt 56156440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 7084370 - 7084411
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  7084370 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 7084411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 8517152 - 8517111
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  8517152 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 8517111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 8670758 - 8670796
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  8670758 tctatcgatttgaatgaatgaatatcgttttatttttgt 8670796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 9048953 - 9048991
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  9048953 tctatcaatttgaatgaatgaatatcgttttgtttttgt 9048991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 11210006 - 11209965
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  11210006 gtactctatcaatttgaatgaatgaatatc-ttttatttttgt 11209965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 12493607 - 12493649
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||    
T  12493607 gtactctatcaattttaatgaatgaatatcattttatttttgt 12493649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 13965971 - 13966012
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  13965971 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 13966012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 14346838 - 14346879
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  14346838 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 14346879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 24826067 - 24826108
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  24826067 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 24826108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 36162001 - 36162039
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  36162001 tctatcaatttgaatgaatgaatatcattttatttttgt 36162039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 38435005 - 38435046
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  38435005 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 38435046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 42197981 - 42198022
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  42197981 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 42198022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 43244074 - 43244033
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  43244074 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 43244033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48257488 - 48257433
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||| |||||||||||||||||||    |||||||| ||||||||||| |||||||||||    
T  48257488 tttaacgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttt 48257433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 6882372 - 6882405
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  6882372 gtactctatcaatttgaatgaatgaatatcgttt 6882405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 7060742 - 7060775
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  7060742 gtactctatcaatttgaatgaatgaatatcgttt 7060775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 7273638 - 7273605
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgtttt 61  Q
    ||||||||||||||||||||| ||||||||||||    
T  7273638 tactctatcaatttgaatgaatgaatatcgtttt 7273605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24098925 - 24098871
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgtt 59  Q
    |||||| |||||||||||||||||    |||||||| ||||||||||| ||||||||||    
T  24098925 tttagcaatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgtt 24098871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 27360073 - 27360032
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||    
T  27360073 tactctatcaatttgaaagaatgaatatcattttatttttgt 27360032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 29266597 - 29266564
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  29266597 gtactctatcaatttgaatgaatgaatatcgttt 29266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 31522374 - 31522407
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  31522374 gtactctatcaatttgaatgaatgaatatcgttt 31522407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 9180735 - 9180767
Alignment:
Q  37 aatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||| ||||||||||||||||||||    
T  9180735 aatttgaatgaatgaatatcgttttatttttgt 9180767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 55600237 - 55600198
Alignment:
Q  29 actctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  55600237 actctatcaatttgaatgaatgaatatcg-tttatttttgt 55600198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 31127 - 31066
Alignment:
Q  4 agcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||    ||| |||||||||||||||| ||||||||||||||||||||    
T  31127 agcgatgtttgtatctgatgt----actatatcaatttgaatgaatgaatatcgttttatttttgt 31066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40618927 - 40618863
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    | |||||||||||||||||| |||||||||||| |||||||    
T  40618927 tttagcgatgtttgtatctgatgt----attctatcaatttgaatgaatgaatatcgttttgtttttgt 40618863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 19443885 - 19443843
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  19443885 gtactctatcaatttgaatgaatgaatatcgttttatttttgt 19443843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27110319 - 27110250
Alignment:
Q  1 tttagcgatgtttgtatctgatgtga-gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||| |||||||||||||||||||| | ||||||||||||  |||||| || |||||||||||||||||    
T  27110319 tttagtgatgtttgtatctgatgtgatgcactctatcaattcaaatgaatgattatcgttttatttttgt 27110250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7883095 - 7883031
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||  ||||||||||| |||||||||||| |||||||    
T  7883095 tttagcgatgtttgtatctgatgt----actctattgatttgaatgaatgaatatcgttttgtttttgt 7883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9637263 - 9637199
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||| ||||||||||||||||||    ||||||||||||| |||||| |||||||||||| |||||||    
T  9637263 tttagtgatgtttgtatctgatgt----actctatcaatttaaatgaatgaatatcgttttgtttttgt 9637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17693467 - 17693403
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||| ||||||    ||||||||||||||| |||| |||||||||||| |||||||    
T  17693467 tttagcgatgtttgtatttgatgt----actctatcaatttgagtgaatgaatatcgttttgtttttgt 17693403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23230878 - 23230934
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgtttt 61  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| ||||||||||||    
T  23230878 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgtttt 23230934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28086666 - 28086602
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    ||| ||||||||||||| || |||||||||||| |||||||    
T  28086666 tttagcgatgtttgtatctgatgt----actatatcaatttgaataaatgaatatcgttttgtttttgt 28086602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 37971523 - 37971586
Alignment:
Q  2 ttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||||    |||||||  |||||| |||| ||||||||||||||||||||    
T  37971523 ttagcgatgtttgtatctgatgt----actctattgatttgagtgaatgaatatcgttttatttttgt 37971586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40211154 - 40211091
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttg 68  Q
    ||||||||||||| ||||||||||    |||||||| ||||||||||| |||||||||||| ||||||    
T  40211154 tttagcgatgtttatatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttg 40211091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16928611 - 16928557
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgtt 59  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| ||||||||||    
T  16928611 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgtt 16928557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 27498214 - 27498156
Alignment:
Q  7 gatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||    |||||||||||||||||||| ||||||  ||||||||||||    
T  27498214 gatgtttgtatctgatgt----actctatcaatttgaatgaatgaatattattttatttttgt 27498156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30568175 - 30568111
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||| |||||| |    |||||||||||||||||| ||||||| |||| |||||||    
T  30568175 tttagcgatgtttgtatatgatgtaa----tctatcaatttgaatgaatgaatatcattttgtttttgt 30568111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 2234171 - 2234130
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  2234171 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 2234130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 15596984 - 15596946
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttt 66  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  15596984 tactctatcaatttgaatgaatgaatatcgttttgtttt 15596946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 24790871 - 24790830
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  24790871 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 24790830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 31202876 - 31202917
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  31202876 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 31202917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 39152959 - 39152917
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||    
T  39152959 gtactttatcgatttgaatgaatgaatatcgttttatttttgt 39152917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 1809939 - 1809906
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  1809939 gtactctatcaatttgaatgaatgaatatcgttt 1809906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 2968943 - 2968976
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  2968943 gtactctatcaatttgaatgaatgaatatcgttt 2968976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 4757576 - 4757609
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  4757576 gtactctatcaatttgaatgaatgaatatcgttt 4757609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 9501996 - 9502029
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  9501996 gtactctatcaatttgaatgaatgaatatcgttt 9502029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 10377932 - 10377973
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||| ||||||||||| |||||||||||| |||||||    
T  10377932 tactctatcgatttgaatgaatgaatatcgttttgtttttgt 10377973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 37613065 - 37613105
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  37613065 tactctatcaatttgaatgaatgaatatcg-tttatttttgt 37613105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 41362161 - 41362194
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  41362161 gtactctatcaatttgaatgaatgaatatcgttt 41362194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41684608 - 41684662
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgtt 59  Q
    ||||||||||||| ||||||||||    ||||||||||||| |||||| ||||||||||    
T  41684608 tttagcgatgtttatatctgatgt----actctatcaatttaaatgaatgaatatcgtt 41684662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 3673704 - 3673740
Alignment:
Q  33 tatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||| |||||||||||| |||||||    
T  3673704 tatcaatttgaatgaatgaatatcgttttgtttttgt 3673740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 20227107 - 20227067
Alignment:
Q  29 actctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  20227107 actctatcaatttgaacgaatgaatatcgttttattattgt 20227067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 33214503 - 33214463
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    |||||||||| ||||||||||| |||||||||||| |||||    
T  33214503 gtactctatcgatttgaatgaatgaatatcgttttgttttt 33214463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 34680699 - 34680663
Alignment:
Q  33 tatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  34680699 tatcaatttgaatgaatgaatatcattttatttttgt 34680663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 38545516 - 38545484
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttt 60  Q
    ||||||||||||||||||||| |||||||||||    
T  38545516 tactctatcaatttgaatgaatgaatatcgttt 38545484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12141163 - 12141099
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  12141163 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 12141099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28044612 - 28044548
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  28044612 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 28044548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28407774 - 28407712
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||||||||||| ||||||    |||||||||||||||||||| |||||||||||| |||||    
T  28407774 tttagcgatgtttgtatttgatgt----actctatcaatttgaatgaatgaatatcgttttgttttt 28407712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8001402 - 8001341
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttt 66  Q
    |||||||||||||||||||||||     |||||||| ||||||||||| |||||||||||||||||    
T  8001402 tttagcgatgtttgtatctgatgc----actctatcgatttgaatgaatgaatatcgttttatttt 8001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9977066 - 9977002
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||| |||||||||||||||||    ||||||||||||| |||||| |||||||||||| |||||||    
T  9977066 tttagcaatgtttgtatctgatgt----actctatcaatttaaatgaatgaatatcgttttgtttttgt 9977002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34899463 - 34899399
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||| ||||||    ||||||||||||||||||||  |||||| ||||||||||||    
T  34899463 tttagcgatgtttgtatttgatgt----actctatcaatttgaatgaataaatatcattttatttttgt 34899399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 17611651 - 17611693
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  17611651 gtactctatcaatttgaatgaatgaatatcgttttgtttttgt 17611693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37837314 - 37837259
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttt 60  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||    
T  37837314 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttt 37837259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 25287022 - 25286982
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  25287022 gtactctatcaatttgaatgaataaatatcgttttattttt 25286982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40993392 - 40993453
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttt 66  Q
    ||||||||||||||||||||||    |||||||||| |||| |||||| |||||||||||| ||||    
T  40993392 tttagcgatgtttgtatctgat----gtactctatcgatttaaatgaatgaatatcgttttgtttt 40993453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48061657 - 48061721
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||| |||||||||| |||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  48061657 tttagagatgtttgtacctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 48061721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 2623020 - 2623061
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  2623020 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 2623061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 4621073 - 4621032
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  4621073 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 4621032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 21991090 - 21991131
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  21991090 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 21991131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 38277225 - 38277266
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  38277225 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 38277266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 41288384 - 41288425
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  41288384 gtactctatcaatttgaatgaaagaatatcg-tttatttttgt 41288425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 43369587 - 43369549
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  43369587 tctatcaatttaaatgaatgaatatcgttttatttttgt 43369549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 44482571 - 44482530
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  44482571 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 44482530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 48643519 - 48643478
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  48643519 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 48643478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 8180229 - 8180262
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  8180229 gtactctatcaatttgaatgaatgaatatcgttt 8180262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 11833446 - 11833479
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  11833446 gtactctatcaatttgaatgaatgaatatcgttt 11833479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 25854919 - 25854886
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  25854919 gtactctatcaatttgaatgaatgaatatcgttt 25854886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 37375749 - 37375716
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  37375749 gtactctatcaatttgaatgaatgaatatcgttt 37375716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 48316652 - 48316611
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||| ||||||||||| |||||||||||| |||||||    
T  48316652 tactctatcgatttgaatgaatgaatatcgttttgtttttgt 48316611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 10094869 - 10094901
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttt 60  Q
    ||||||||||||||||||||| |||||||||||    
T  10094869 tactctatcaatttgaatgaatgaatatcgttt 10094901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 21603886 - 21603918
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgtt 59  Q
    |||||||||||||||||||||| ||||||||||    
T  21603886 gtactctatcaatttgaatgaatgaatatcgtt 21603918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 24610087 - 24610051
Alignment:
Q  33 tatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  24610087 tatcaatttgaatgaatgaatatcattttatttttgt 24610051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 39707698 - 39707737
Alignment:
Q  29 actctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  39707698 actctatcaatttgaatgaatgaatatcg-tttatttttgt 39707737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 44311620 - 44311580
Alignment:
Q  29 actctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  44311620 actctatcaatttgaacgaatgaatatcgttttattattgt 44311580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9113581 - 9113517
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  9113581 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 9113517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13007461 - 13007525
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||| ||||||    |||||||||||||||||||| |||||||||||| |||||||    
T  13007461 tttagcgatgtttgtatttgatgt----actctatcaatttgaatgaatgaatatcgttttgtttttgt 13007525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34945625 - 34945689
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| |||| |||||| ||||||||||||||||||||    
T  34945625 tttagcgatgtttgtatctgatgt----actctatcgattttaatgaaagaatatcgttttatttttgt 34945689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14082252 - 14082187
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    |||||||||||||||||||||||||    ||||||| ||||||||||| | |||||||||| ||||||||    
T  14082252 tttagcgatgtttgtatctgatgtg----ctctatcgatttgaatgaatggatatcgttttgtttttgtt 14082187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24229640 - 24229575
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    ||||||||||||| ||||||||||    |||||||| ||||||||||| |||||||||||| ||||||||    
T  24229640 tttagcgatgtttatatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgtt 24229575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38598029 - 38598086
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgtttta 62  Q
    ||||||||||||||||||||||||    |||||||||||||||||||| ||||| |||||||    
T  38598029 tttagcgatgtttgtatctgatgt----actctatcaatttgaatgaatgaataacgtttta 38598086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1409732 - 1409796
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||| |||||||||| || |||||||||||| |||||||    
T  1409732 tttagcgatgtttgtatctgatgt----actctaccaatttgaataaatgaatatcgttttgtttttgt 1409796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6011994 - 6011930
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||| |||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  6011994 tttaacgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 6011930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38007589 - 38007653
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||||| |    |||||| ||||||||||| |||||||||||| |||||||    
T  38007589 tttagcgatgtttgtatctgatgtaa----tctatcgatttgaatgaatgaatatcgttttgtttttgt 38007653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 6217158 - 6217195
Alignment:
Q  33 tatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    |||||||||||||||| |||||||||||||||||||||    
T  6217158 tatcaatttgaatgaatgaatatcgttttatttttgtt 6217195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 26825685 - 26825726
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  26825685 tactctatcgatttgaatgaatgaatatcgttttatttttgt 26825726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 4771111 - 4771150
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  4771111 tactctatcaatttgaatgaatgaatatcgttttgttttt 4771150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14726317 - 14726253
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||| |||||||||||||||||| |    |||||| ||||||||||| |||||||||||| |||||||    
T  14726317 tttagtgatgtttgtatctgatgtaa----tctatcgatttgaatgaatgaatatcgttttgtttttgt 14726253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 8984819 - 8984781
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  8984819 tctatcaatttgaatgaatgaatatcgttttgtttttgt 8984781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 9196724 - 9196683
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  9196724 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 9196683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11867881 - 11867947
Alignment:
Q  1 tttagcgatgtttgtatctgatgtga-gtactctatcaatttgaatgaacgaatatcgttttatttt 66  Q
    |||| ||| |||||||| |||||||| ||||||||||||||||||| || ||| |||||||| ||||    
T  11867881 tttatcgacgtttgtatatgatgtgatgtactctatcaatttgaataaatgaacatcgttttttttt 11867947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 17331756 - 17331797
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  17331756 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 17331797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 23881809 - 23881768
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  23881809 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 23881768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 34431492 - 34431533
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  34431492 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 34431533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 39531101 - 39531060
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  39531101 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 39531060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 42505106 - 42505065
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  42505106 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 42505065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 586168 - 586201
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  586168 gtactctatcaatttgaatgaatgaatatcgttt 586201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 3740760 - 3740793
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  3740760 gtactctatcaatttgaatgaatgaatatcgttt 3740793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8096354 - 8096293
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||||||||||||| ||||    |||||||| ||||||||||| |||||||||||| |||||    
T  8096354 tttagcgatgtttgtatct-atgt----actctatcgatttgaatgaatgaatatcgttttgttttt 8096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 6281473 - 6281505
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttt 60  Q
    ||||||||||||||||||||| |||||||||||    
T  6281473 tactctatcaatttgaatgaatgaatatcgttt 6281505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 40268351 - 40268311
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||||||||| |||||| ||||||||||| ||||||    
T  40268351 gtactctatcaatttaaatgaaagaatatcgtttaattttt 40268311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5427726 - 5427662
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  5427726 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 5427662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31788699 - 31788763
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  31788699 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 31788763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37876463 - 37876399
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||| ||||||    |||||||||||||||||||| |||||||||||| |||||||    
T  37876463 tttagcgatgtttgtatttgatgt----actctatcaatttgaatgaatgaatatcgttttgtttttgt 37876399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11985090 - 11985028
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||    
T  11985090 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgtttttttttt 11985028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31193193 - 31193129
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||| ||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  31193193 tttagtgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 31193129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36942979 - 36942915
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||  ||||||||||| |||||||||||| |||||||    
T  36942979 tttagcgatgtttgtatctgatgt----actctattgatttgaatgaatgaatatcgttttgtttttgt 36942915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 24461708 - 24461746
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  24461708 tctatcaatttgaatgaatgaatatcgttttatttttgt 24461746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35220571 - 35220634
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttg 68  Q
    ||||||||| ||||||||||||||    |||||||||||||||||||| |||| ||||||| ||||||    
T  35220571 tttagcgatctttgtatctgatgt----actctatcaatttgaatgaatgaatgtcgttttgtttttg 35220634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 36692118 - 36692181
Alignment:
Q  2 ttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||||    |||||||| ||||||||||| | |||||||||| |||||||    
T  36692118 ttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgtatatcgttttgtttttgt 36692181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 459092 - 459051
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  459092 tactctatcgatttgaatgaatgaatatcgttttatttttgt 459051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 12554003 - 12553962
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  12554003 tactctatcaatttgaatgaatgaatatcattttatttttgt 12553962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29279427 - 29279358
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgag-tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||| ||||| ||||||||  |||| |||||||||||||||| |||||||||||  |||||||    
T  29279427 tttagcgatgtctgtatttgatgtgatatactttatcaatttgaatgaatgaatatcgtttagtttttgt 29279358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 41328005 - 41328046
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  41328005 tactctatcaatttgaatgaatgaatatcgttttgtttttgt 41328046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 7071468 - 7071428
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  7071468 gtactctatcaatttgaatgaatgaatatcgtttttttttt 7071428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 38445416 - 38445473
Alignment:
Q  8 atgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  38445416 atgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 38445473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1415800 - 1415864
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||    ||| |||||| ||||||||||| ||||||| |||| |||||||    
T  1415800 tttagcgatgtttgtatctgat----gtaatctatcgatttgaatgaatgaatatcattttgtttttgt 1415864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4778996 - 4779060
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||| ||||||    |||||||| ||||||||||| |||||| ||||| |||||||    
T  4778996 tttagcgatgtttgtatttgatgt----actctatcgatttgaatgaatgaatatagttttgtttttgt 4779060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18763711 - 18763775
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||| ||||||||||||||    |||||||  ||||||||||| |||||||||||| |||||||    
T  18763711 tttagcgatatttgtatctgatgt----actctattgatttgaatgaatgaatatcgttttgtttttgt 18763775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25508925 - 25508861
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||| |||||||||||| ||||||    ||||||||||||||||||||  ||||||||||| |||||||    
T  25508925 tttaccgatgtttgtatatgatgt----actctatcaatttgaatgaataaatatcgttttgtttttgt 25508861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 33012476 - 33012518
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  33012476 gtactctatcaatttgaatgaatgaatatcg-tttatttttgtt 33012518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33585592 - 33585528
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||| |||||||||||||||||||    |||||||  ||||||||||| |||||||||||| |||||||    
T  33585592 tttaacgatgtttgtatctgatgt----actctattgatttgaatgaaagaatatcgttttgtttttgt 33585528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33923948 - 33924012
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||| |||||||||||||| |    |||||| ||||||||||| |||||||||||| |||||||    
T  33923948 tttagcgatttttgtatctgatgtaa----tctatcgatttgaatgaatgaatatcgttttgtttttgt 33924012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 3527414 - 3527455
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  3527414 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 3527455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 4903980 - 4903938
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||| |||||| |||||||||||| |||||||    
T  4903980 gtactctatcaatttaaatgaatgaatatcgttttgtttttgt 4903938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 13878702 - 13878661
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  13878702 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 13878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 14018827 - 14018786
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  14018827 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 14018786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 16136506 - 16136547
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  16136506 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 16136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 20560826 - 20560785
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  20560826 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 20560785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 25068269 - 25068310
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  25068269 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 25068310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 28230790 - 28230749
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  28230790 gtactctaacaatttgaatgaacgaatatcg-tttatttttgt 28230749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 29543221 - 29543262
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  29543221 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 29543262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 30923292 - 30923250
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| ||||||| |||| |||||||    
T  30923292 gtactctatcaatttgaatgaatgaatatcattttgtttttgt 30923250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 35333933 - 35333974
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  35333933 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 35333974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 37994552 - 37994590
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  37994552 tctatcaatttgaatgaatgaatatcgttttgtttttgt 37994590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 43696296 - 43696337
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  43696296 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 43696337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 4739757 - 4739790
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  4739757 gtactctatcaatttgaatgaatgaatatcgttt 4739790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8809522 - 8809580
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgtttt 61  Q
    ||||| ||||||||||||| || ||  ||||||||||||||||||||| ||||||| ||||    
T  8809522 tttagtgatgtttgtatcttatatg--tactctatcaatttgaatgaatgaatatcatttt 8809580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 12646945 - 12646912
Alignment:
Q  36 caatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||| ||||||||||||||||||||    
T  12646945 caatttgaatgaatgaatatcgttttatttttgt 12646912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12677308 - 12677246
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    |||||||||||||||||||||||| |    ||| || ||||||||||| |||||||||||| |||||    
T  12677308 tttagcgatgtttgtatctgatgtaa----tctgtcgatttgaatgaatgaatatcgttttgttttt 12677246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 17994581 - 17994513
Alignment:
Q  3 tagcgatgtttgtatctgatgtgag--tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||| ||||||||||| |   |||||| |||||||||||||| || ||||||||| |||||||    
T  17994581 tagcgatgttagtatctgatgtaataatactctctcaatttgaatgaatgattatcgttttgtttttgt 17994513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 19062182 - 19062141
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||| |||||| |||||| |||||||||||||    
T  19062182 tactctatcaatttaaatgaatgaatattgttttatttttgt 19062141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 31908510 - 31908477
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  31908510 gtactctatcaatttgaatgaatgaatatcgttt 31908477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 32015681 - 32015714
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  32015681 gtactctatcaatttgaatgaatgaatatcgttt 32015714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 36868437 - 36868477
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  36868437 tactctatcaatttgaatgaatgaatatcg-tttatttttgt 36868477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 44942714 - 44942747
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  44942714 gtactctatcaatttgaatgaatgaatatcgttt 44942747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 3390830 - 3390869
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  3390830 gtactctatcaatttgaatgaatgaatatc-ttttattttt 3390869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 4604008 - 4603976
Alignment:
Q  28 tactctatcaatttgaatgaacgaatatcgttt 60  Q
    ||||||||||||||||||||| |||||||||||    
T  4604008 tactctatcaatttgaatgaatgaatatcgttt 4603976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 18107574 - 18107528
Alignment:
Q  27 gtactctatcaatttgaatgaacga---atatcgttttatttttgtt 70  Q
    |||||||||||||||||||||| ||   |||||||||||||||||||    
T  18107574 gtactctatcaatttgaatgaatgatgcatatcgttttatttttgtt 18107528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7337519 - 7337455
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||| |||||||||    
T  7337519 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttatatttttgt 7337455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11462338 - 11462274
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  11462338 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 11462274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26535572 - 26535636
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||| |||||||||||||||||    |||||||||||||||||||| |||||||||||| |||||||    
T  26535572 tttagctatgtttgtatctgatgt----actctatcaatttgaatgaatgaatatcgttttgtttttgt 26535636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35484247 - 35484183
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||||    |||||||| ||||||||||| ||||||||||||||| ||||    
T  35484247 tttagcgatgtttgtatctgatgt----actctatcgatttgaatgaatgaatatcgttttattgttgt 35484183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44915875 - 44915939
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||| ||||||||||||||||||    |||||||||||||||||||| ||||||| ||||||||||||    
T  44915875 tttagtgatgtttgtatctgatgt----actctatcaatttgaatgaatgaatatcattttatttttgt 44915939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27456720 - 27456789
Alignment:
Q  1 tttagcgatgtttgtatctgatgtga-gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||| |||||||||| ||  |||||| |||||||||||||||||||||| |||||||||||| |||||||    
T  27456720 tttaacgatgtttgtgtcgaatgtgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgt 27456789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31919225 - 31919286
Alignment:
Q  1 tttagcgatgtttgtatctgatgtga-gtactctatcaatttgaatgaacgaatatcgtttt 61  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||||| |||| |||||||    
T  31919225 tttagcgaagtttgtatatgatgtgatgtactctatcaatttgaatgaatgaatttcgtttt 31919286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10776317 - 10776253
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||| |||||||     ||||||||||||||||||||||||||||| |||| |||||||    
T  10776317 tttagcgatgtttgcatctgat----atactctatcaatttgaatgaacgaatatcattttgtttttgt 10776253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 33486729 - 33486687
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  33486729 gtactctatcaatttgaatgaatgaatatcgttttttttttgt 33486687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 21687616 - 21687678
Alignment:
Q  3 tagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |    |||||| ||||||||||| |||||||||||| |||||||    
T  21687616 tagcgatgtttgtatctgatgtaa----tctatcgatttgaatgaatgaatatcgttttgtttttgt 21687678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23289248 - 23289187
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttt 66  Q
    ||||||||||||||||| |||||| |    |||||| ||||||||||| |||||||||||||||||    
T  23289248 tttagcgatgtttgtatatgatgtaa----tctatcgatttgaatgaatgaatatcgttttatttt 23289187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4413350 - 4413414
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||    |||||||||| ||||||| |||  ||||||||||| |||||||    
T  4413350 tttagcgatgtttgtatctgat----gtactctatcgatttgaacgaataaatatcgttttgtttttgt 4413414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 21947452 - 21947413
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttt 66  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  21947452 gtactctatcgatttgaatgaatgaatatcgttttatttt 21947413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36894264 - 36894200
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||| ||||||| ||||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  36894264 tttagcgatatttgtatttgatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 36894200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 49504451 - 49504387
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||| |||||||||||||| ||||    |||||||| ||||||||||| |||||||||||| |||||||    
T  49504451 tttaacgatgtttgtatcttatgt----actctatcgatttgaatgaatgaatatcgttttgtttttgt 49504387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 4882070 - 4882029
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  4882070 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 4882029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 12872034 - 12872075
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  12872034 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 12872075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 13152855 - 13152896
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  13152855 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 13152896  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 29205696 - 29205737
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  29205696 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 29205737  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 44517576 - 44517617
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  44517576 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 44517617  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 47133164 - 47133202
Alignment:
Q  31 tctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  47133164 tctatcaatttgaatgaatgaatatcgttttgtttttgt 47133202  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 2351028 - 2351061
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    ||||||||||||||||||||||||||||| ||||    
T  2351028 gtactctatcaatttgaatgaacgaatattgttt 2351061  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 25032796 - 25032763
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  25032796 gtactctatcaatttgaatgaatgaatatcgttt 25032763  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51373714 - 51373652
Alignment:
Q  1 tttagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttattttt 67  Q
    |||| |||||||||||||| ||||    ||| |||||||||||||||| ||| ||||||||||||||    
T  51373714 tttatcgatgtttgtatctaatgt----actttatcaatttgaatgaatgaacatcgttttattttt 51373652  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 51916531 - 51916466
Alignment:
Q  1 tttagcgatgtttgtatctgatgtga-gtactctatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||    |||||||| |||||||||    
T  51916531 tttagcgatgtttgtat-tgatgtgatgtactctatcgatttgaatgaa----tatcgtttaatttttgtt 51916466  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 50377587 - 50377623
Alignment:
Q  33 tatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||| |||||||||||| |||||||    
T  50377587 tatcaatttgaatgaatgaatatcgttttgtttttgt 50377623  T

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Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 36508 - 36465
Alignment:
Q  26 agtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  36508 agtactctatcaatttgaatgaaagaatatcgttttgtttttgt 36465  T

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Target: scaffold0603 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 7982 - 8024
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  7982 gtactctatcaatttgaatgaatgaatatcgttttttttttgt 8024  T

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Target: scaffold0536 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 3323 - 3364
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  3323 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 3364  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 26870 - 26828
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||    
T  26870 gtactctatcaattttaatgaatgaatatcattttatttttgt 26828  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 35503 - 35544
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  35503 gtactctatcaatttgaatgaatgaatatcg-tttatttttgt 35544  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 53235 - 53193
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||| |||||||||||||||| |||||||||||| |||||||    
T  53235 gtactatatcaatttgaatgaatgaatatcgttttgtttttgt 53193  T

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Target: scaffold0634 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 8774 - 8811
Alignment:
Q  33 tatcaatttgaatgaacgaatatcgttttatttttgtt 70  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  8774 tatcgatttgaatgaaggaatatcgttttatttttgtt 8811  T

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Target: scaffold0294 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 3760 - 3727
Alignment:
Q  27 gtactctatcaatttgaatgaacgaatatcgttt 60  Q
    |||||||||||||||||||||| |||||||||||    
T  3760 gtactctatcaatttgaatgaatgaatatcgttt 3727  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 71724 - 71662
Alignment:
Q  3 tagcgatgtttgtatctgatgtgagtactctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    ||||||||||||||||||||||    |||||||||||||||||||  || |||| |||| |||||||    
T  71724 tagcgatgtttgtatctgatgt----actctatcaatttgaatgactgagtatctttttgtttttgt 71662  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 71132 - 71092
Alignment:
Q  29 actctatcaatttgaatgaacgaatatcgttttatttttgt 69  Q
    |||||||||| ||||||||| ||||||| ||||||||||||    
T  71132 actctatcaaattgaatgaatgaatatcattttatttttgt 71092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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