View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6880_high_14 (Length: 243)
Name: NF6880_high_14
Description: NF6880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6880_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 4 - 232
Target Start/End: Original strand, 14381393 - 14381621
Alignment:
| Q |
4 |
acttcagcgatcctgaattctttgattggtacacccattcttgaccaaccgcgaaaagcagtttctccatcaatgttaatatatgcaagaagatgtggaa |
103 |
Q |
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| T |
14381393 |
acttcagcgatcctgaattctttgattggtacacccattcttgaccaaccgcgaaaagcagtttctccatcaatgttaatatatgcaagaagatgtggaa |
14381492 |
T |
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| Q |
104 |
cagcttcctgaatgtcctcgcgtatctcatatgttgattcgagtcgaaagagattaaaatttcgaagaagatagtcatgtaatgttaaaaattgtaagtt |
203 |
Q |
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| T |
14381493 |
cagcttcctgaatgtcctcgcgtatctcatatgttgattcgagtcgaaagagattaaaatttcgaagaagatagtcatgtaatgttaaaaattgtaagtt |
14381592 |
T |
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| Q |
204 |
cagctttggcaacgctaaacaaccttctc |
232 |
Q |
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||||||||| ||||||||||||||||||| |
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| T |
14381593 |
cagctttggtaacgctaaacaaccttctc |
14381621 |
T |
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