View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6880_high_17 (Length: 216)
Name: NF6880_high_17
Description: NF6880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6880_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 34259584 - 34259375
Alignment:
| Q |
1 |
agacacttttctgccacacaggtttactacacatataattgcaatgcaggactaaagagtttggtctattagttctacatttgaatttgatgaaaataat |
100 |
Q |
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||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
34259584 |
agacacttttctgccacacaggtttactacatatataattacaatgcaggactaaagagtttggtctattagttctacatttgaaattgatgaaaataat |
34259485 |
T |
|
| Q |
101 |
gttttaaattttaaaaaccgaaccaaacattgaaccgtaagatttttggatcatagttcaaccgccttaaacttctcaaaccaggaagaaactactatcg |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
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|
| T |
34259484 |
gttttaaattttaaaaaccgaaccaaacattgaaccgtaagatttttagatcatagttcaaccgccttaaacttctcgaaccgggaagaaactactatcg |
34259385 |
T |
|
| Q |
201 |
aaccaccaaa |
210 |
Q |
| |
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|||||||||| |
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| T |
34259384 |
aaccaccaaa |
34259375 |
T |
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