View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6882_high_7 (Length: 301)
Name: NF6882_high_7
Description: NF6882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6882_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 271
Target Start/End: Complemental strand, 30782053 - 30781801
Alignment:
| Q |
19 |
ctttgaacatcgcttattgtaccaatggttgcaagaaaagggacggtttactttgctttgaatcattcctatcatcagcaaagacctaattccaagtctt |
118 |
Q |
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| T |
30782053 |
ctttgaacatcgcttattgtaccaatggttgcaagagaagggaccgtttactttgctttgaatcattcctatcatcagcaaagacctaattcctagtctt |
30781954 |
T |
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| Q |
119 |
caaggcaggcgaatccaaaaggactaaaaggaataagtttcctataccctagatggcataggaacatttagaggttagagtagagctcacttctccactc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30781953 |
caaggcaggcgaatccaaaaggactaaaaggaataagtttcctataccctagatggcataggaacatttagaggttagagtagagctcacttctccactc |
30781854 |
T |
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| Q |
219 |
ggttcttaatacgtggattttagaataaagattgatagacattcaaaactctt |
271 |
Q |
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|||||||||||||||| |||||||||||||||||||||||| |||||| |||| |
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| T |
30781853 |
ggttcttaatacgtgggttttagaataaagattgatagacactcaaaattctt |
30781801 |
T |
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